Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173250 | XP_013469342.2 | 94.141 | 256 | 15 | 0 | 1 | 256 | 1 | 256 | 2.19e-176 | 505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173250 | sp|Q8VWZ7|C76B6_CATRO | 39.033 | 269 | 157 | 3 | 1 | 266 | 1 | 265 | 3.57e-58 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035650 | Msa1173250 | 0.896207 | 4.604974e-76 | -8.615850e-47 |
| Msa0035660 | Msa1173250 | 0.813350 | 2.676767e-51 | -8.615850e-47 |
| Msa0035670 | Msa1173250 | 0.967043 | 9.780539e-127 | -8.615850e-47 |
| Msa0035690 | Msa1173250 | 0.869400 | 3.185360e-66 | -8.615850e-47 |
| Msa0035710 | Msa1173250 | 0.835459 | 1.657889e-56 | -8.615850e-47 |
| Msa0048510 | Msa1173250 | 0.804815 | 1.801852e-49 | -8.615850e-47 |
| Msa0077560 | Msa1173250 | 0.820785 | 5.707561e-53 | -8.615850e-47 |
| Msa0083730 | Msa1173250 | 0.815263 | 1.010886e-51 | -8.615850e-47 |
| Msa0083750 | Msa1173250 | 0.886031 | 4.871694e-72 | -8.615850e-47 |
| Msa0083800 | Msa1173250 | 0.830935 | 2.218545e-55 | -8.615850e-47 |
| Msa0682770 | Msa1173250 | 0.801479 | 8.831713e-49 | -8.615850e-47 |
| Msa0687580 | Msa1173250 | 0.804992 | 1.654741e-49 | -8.615850e-47 |
| Msa0709440 | Msa1173250 | 0.806755 | 7.050207e-50 | -8.615850e-47 |
| Msa0714640 | Msa1173250 | 0.800655 | 1.301802e-48 | -8.615850e-47 |
| Msa0716890 | Msa1173250 | 0.821232 | 4.503416e-53 | -8.615850e-47 |
| Msa0734250 | Msa1173250 | 0.800690 | 1.280185e-48 | -8.615850e-47 |
| Msa0743440 | Msa1173250 | 0.800370 | 1.488151e-48 | -8.615850e-47 |
| Msa0176150 | Msa1173250 | 0.866043 | 3.803891e-65 | -8.615850e-47 |
| Msa0176170 | Msa1173250 | 0.839966 | 1.155158e-57 | -8.615850e-47 |
| Msa0401970 | Msa1173250 | 0.816903 | 4.350746e-52 | -8.615850e-47 |
| Msa0481890 | Msa1173250 | 0.804331 | 2.274452e-49 | -8.615850e-47 |
| Msa0980290 | Msa1173250 | 0.800947 | 1.134760e-48 | -8.615850e-47 |
| Msa1031410 | Msa1173250 | 0.806498 | 7.989518e-50 | -8.615850e-47 |
| Msa1074890 | Msa1173250 | 0.801252 | 9.830217e-49 | -8.615850e-47 |
| Msa1084530 | Msa1173250 | 0.805385 | 1.369533e-49 | -8.615850e-47 |
| Msa1101160 | Msa1173250 | 0.829392 | 5.282022e-55 | -8.615850e-47 |
| Msa1106590 | Msa1173250 | 0.818993 | 1.466651e-52 | -8.615850e-47 |
| Msa0269210 | Msa1173250 | 0.816717 | 4.789875e-52 | -8.615850e-47 |
| Msa1125820 | Msa1173250 | 0.804865 | 1.759751e-49 | -8.615850e-47 |
| Msa1125990 | Msa1173250 | 0.806320 | 8.710638e-50 | -8.615850e-47 |
| Msa1171290 | Msa1173250 | 0.806139 | 9.508666e-50 | -8.615850e-47 |
| Msa1173230 | Msa1173250 | 0.891250 | 4.716011e-74 | -8.615850e-47 |
| Msa1173240 | Msa1173250 | 0.830702 | 2.530313e-55 | -8.615850e-47 |
| Msa1173250 | Msa1173260 | 0.814323 | 1.633687e-51 | -8.615850e-47 |
| Msa1173250 | Msa1338540 | 0.821621 | 3.663210e-53 | -8.615850e-47 |
| Msa1173250 | Msa1366150 | 0.806661 | 7.381008e-50 | -8.615850e-47 |
| Msa1173250 | Msa1384150 | 0.808739 | 2.671046e-50 | -8.615850e-47 |
| Msa1173250 | Msa1387440 | 0.817329 | 3.489063e-52 | -8.615850e-47 |
| Msa0574900 | Msa1173250 | 0.803871 | 2.834809e-49 | -8.615850e-47 |
| Msa0865450 | Msa1173250 | 0.801417 | 9.091580e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173250 | MtrunA17_Chr1g0197851 | 94.141 | 256 | 15 | 0 | 1 | 256 | 1 | 256 | 2.01e-180 | 505 |
| Msa1173250 | MtrunA17_Chr1g0197881 | 93.750 | 256 | 15 | 1 | 1 | 256 | 1 | 255 | 2.65e-177 | 497 |
| Msa1173250 | MtrunA17_Chr1g0197891 | 92.578 | 256 | 19 | 0 | 1 | 256 | 1 | 256 | 5.42e-176 | 494 |
| Msa1173250 | MtrunA17_Chr1g0197871 | 83.203 | 256 | 43 | 0 | 1 | 256 | 1 | 256 | 3.59e-158 | 449 |
| Msa1173250 | MtrunA17_Chr2g0314731 | 55.814 | 258 | 111 | 2 | 1 | 256 | 1 | 257 | 8.93e-92 | 280 |
| Msa1173250 | MtrunA17_Chr2g0314721 | 53.516 | 256 | 117 | 1 | 3 | 256 | 13 | 268 | 7.08e-89 | 272 |
| Msa1173250 | MtrunA17_Chr1g0176831 | 51.953 | 256 | 121 | 1 | 3 | 256 | 32 | 287 | 1.16e-85 | 265 |
| Msa1173250 | MtrunA17_Chr1g0205361 | 46.124 | 258 | 137 | 1 | 1 | 256 | 1 | 258 | 3.91e-83 | 258 |
| Msa1173250 | MtrunA17_Chr1g0205371 | 43.609 | 266 | 147 | 2 | 1 | 263 | 1 | 266 | 7.17e-82 | 254 |
| Msa1173250 | MtrunA17_Chr1g0160851 | 45.560 | 259 | 139 | 1 | 1 | 257 | 1 | 259 | 1.74e-81 | 253 |
| Msa1173250 | MtrunA17_Chr8g0355961 | 46.043 | 278 | 138 | 3 | 1 | 266 | 1 | 278 | 5.60e-76 | 239 |
| Msa1173250 | MtrunA17_Chr5g0395321 | 46.792 | 265 | 134 | 2 | 1 | 263 | 7 | 266 | 2.09e-75 | 239 |
| Msa1173250 | MtrunA17_Chr8g0356001 | 46.403 | 278 | 137 | 4 | 1 | 266 | 1 | 278 | 6.86e-74 | 234 |
| Msa1173250 | MtrunA17_Chr5g0395331 | 45.833 | 240 | 125 | 1 | 29 | 263 | 32 | 271 | 4.19e-72 | 229 |
| Msa1173250 | MtrunA17_Chr4g0039901 | 41.313 | 259 | 149 | 2 | 1 | 256 | 1 | 259 | 1.48e-67 | 218 |
| Msa1173250 | MtrunA17_Chr1g0164211 | 45.217 | 230 | 124 | 1 | 29 | 256 | 26 | 255 | 5.28e-63 | 205 |
| Msa1173250 | MtrunA17_Chr5g0395381 | 41.509 | 265 | 123 | 3 | 1 | 263 | 7 | 241 | 7.09e-60 | 197 |
| Msa1173250 | MtrunA17_Chr7g0246221 | 39.382 | 259 | 147 | 3 | 8 | 258 | 6 | 262 | 3.23e-59 | 196 |
| Msa1173250 | MtrunA17_Chr7g0246131 | 37.037 | 270 | 162 | 3 | 1 | 264 | 1 | 268 | 2.38e-56 | 188 |
| Msa1173250 | MtrunA17_Chr2g0314771 | 53.750 | 160 | 72 | 1 | 69 | 226 | 1 | 160 | 8.66e-53 | 169 |
| Msa1173250 | MtrunA17_Chr7g0246181 | 37.443 | 219 | 132 | 1 | 45 | 258 | 45 | 263 | 1.04e-48 | 168 |
| Msa1173250 | MtrunA17_Chr7g0246151 | 37.156 | 218 | 133 | 1 | 45 | 258 | 45 | 262 | 1.31e-47 | 165 |
| Msa1173250 | MtrunA17_Chr1g0176851 | 56.115 | 139 | 59 | 1 | 120 | 256 | 1 | 139 | 1.86e-46 | 155 |
| Msa1173250 | MtrunA17_Chr7g0246121 | 39.070 | 215 | 127 | 1 | 45 | 255 | 45 | 259 | 2.54e-46 | 162 |
| Msa1173250 | MtrunA17_Chr1g0200961 | 33.202 | 253 | 162 | 2 | 8 | 257 | 6 | 254 | 1.21e-43 | 154 |
| Msa1173250 | MtrunA17_Chr5g0444971 | 78.049 | 82 | 18 | 0 | 80 | 161 | 1 | 82 | 2.47e-38 | 129 |
| Msa1173250 | MtrunA17_Chr5g0430101 | 31.034 | 261 | 176 | 2 | 1 | 259 | 1 | 259 | 8.64e-34 | 128 |
| Msa1173250 | MtrunA17_Chr4g0057001 | 28.936 | 235 | 160 | 4 | 26 | 256 | 43 | 274 | 7.93e-33 | 125 |
| Msa1173250 | MtrunA17_Chr5g0430031 | 29.536 | 237 | 165 | 1 | 23 | 259 | 26 | 260 | 6.46e-30 | 117 |
| Msa1173250 | MtrunA17_Chr7g0265611 | 26.613 | 248 | 176 | 2 | 16 | 257 | 28 | 275 | 7.20e-30 | 117 |
| Msa1173250 | MtrunA17_Chr5g0430111 | 30.041 | 243 | 168 | 1 | 10 | 252 | 13 | 253 | 2.87e-29 | 114 |
| Msa1173250 | MtrunA17_Chr8g0390881 | 27.953 | 254 | 179 | 2 | 8 | 259 | 8 | 259 | 9.59e-29 | 114 |
| Msa1173250 | MtrunA17_Chr1g0213671 | 28.968 | 252 | 164 | 7 | 29 | 269 | 29 | 276 | 1.25e-28 | 114 |
| Msa1173250 | MtrunA17_Chr7g0258221 | 28.000 | 275 | 188 | 5 | 1 | 268 | 2 | 273 | 1.36e-28 | 114 |
| Msa1173250 | MtrunA17_Chr5g0430091 | 30.800 | 250 | 171 | 1 | 10 | 259 | 13 | 260 | 5.42e-28 | 112 |
| Msa1173250 | MtrunA17_Chr5g0430171 | 33.333 | 219 | 144 | 1 | 10 | 228 | 13 | 229 | 9.15e-28 | 106 |
| Msa1173250 | MtrunA17_Chr1g0174481 | 28.992 | 238 | 164 | 2 | 1 | 236 | 4 | 238 | 1.10e-27 | 111 |
| Msa1173250 | MtrunA17_Chr4g0056951 | 28.111 | 217 | 146 | 3 | 58 | 266 | 68 | 282 | 2.25e-27 | 110 |
| Msa1173250 | MtrunA17_Chr1g0174461 | 28.295 | 258 | 182 | 2 | 7 | 261 | 8 | 265 | 4.97e-27 | 109 |
| Msa1173250 | MtrunA17_Chr5g0430131 | 29.804 | 255 | 173 | 2 | 10 | 264 | 13 | 261 | 6.16e-27 | 109 |
| Msa1173250 | MtrunA17_Chr3g0101581 | 27.863 | 262 | 170 | 7 | 6 | 261 | 11 | 259 | 3.09e-26 | 107 |
| Msa1173250 | MtrunA17_Chr2g0310391 | 28.571 | 266 | 175 | 7 | 10 | 265 | 1 | 261 | 6.70e-26 | 106 |
| Msa1173250 | MtrunA17_Chr6g0484841 | 28.139 | 231 | 160 | 2 | 24 | 254 | 27 | 251 | 2.05e-25 | 104 |
| Msa1173250 | MtrunA17_Chr3g0094231 | 28.807 | 243 | 168 | 3 | 28 | 266 | 30 | 271 | 2.47e-25 | 104 |
| Msa1173250 | MtrunA17_Chr3g0101611 | 25.681 | 257 | 166 | 6 | 26 | 269 | 30 | 274 | 2.71e-25 | 104 |
| Msa1173250 | MtrunA17_Chr6g0484811 | 27.160 | 243 | 173 | 2 | 27 | 269 | 30 | 268 | 2.14e-24 | 102 |
| Msa1173250 | MtrunA17_Chr2g0310381 | 27.547 | 265 | 179 | 7 | 10 | 265 | 1 | 261 | 3.26e-24 | 101 |
| Msa1173250 | MtrunA17_Chr3g0086661 | 29.386 | 228 | 150 | 3 | 43 | 261 | 41 | 266 | 1.24e-23 | 99.8 |
| Msa1173250 | MtrunA17_Chr1g0174471 | 26.236 | 263 | 188 | 3 | 2 | 261 | 21 | 280 | 1.53e-23 | 99.8 |
| Msa1173250 | MtrunA17_Chr3g0086651 | 29.386 | 228 | 150 | 3 | 43 | 261 | 41 | 266 | 1.65e-23 | 99.4 |
| Msa1173250 | MtrunA17_Chr7g0235551 | 24.910 | 277 | 197 | 5 | 1 | 273 | 2 | 271 | 3.89e-23 | 98.2 |
| Msa1173250 | MtrunA17_Chr3g0094171 | 28.017 | 232 | 159 | 4 | 11 | 235 | 14 | 244 | 8.68e-23 | 97.4 |
| Msa1173250 | MtrunA17_Chr8g0361471 | 29.439 | 214 | 142 | 4 | 15 | 223 | 11 | 220 | 1.39e-22 | 96.7 |
| Msa1173250 | MtrunA17_Chr6g0466331 | 28.700 | 223 | 150 | 4 | 6 | 223 | 2 | 220 | 2.19e-22 | 96.3 |
| Msa1173250 | MtrunA17_Chr6g0465511 | 28.700 | 223 | 150 | 4 | 6 | 223 | 2 | 220 | 2.50e-22 | 95.9 |
| Msa1173250 | MtrunA17_Chr1g0174421 | 24.176 | 273 | 201 | 3 | 3 | 272 | 19 | 288 | 3.54e-22 | 94.0 |
| Msa1173250 | MtrunA17_Chr5g0431641 | 27.755 | 245 | 168 | 5 | 30 | 272 | 34 | 271 | 4.10e-22 | 95.5 |
| Msa1173250 | MtrunA17_Chr3g0086691 | 29.091 | 220 | 147 | 2 | 43 | 254 | 41 | 259 | 6.65e-22 | 94.7 |
| Msa1173250 | MtrunA17_Chr8g0344181 | 24.521 | 261 | 174 | 5 | 32 | 273 | 36 | 292 | 7.49e-22 | 94.7 |
| Msa1173250 | MtrunA17_Chr5g0403351 | 26.772 | 254 | 168 | 6 | 24 | 269 | 24 | 267 | 1.56e-21 | 93.6 |
| Msa1173250 | MtrunA17_Chr5g0445461 | 28.731 | 268 | 172 | 8 | 8 | 266 | 13 | 270 | 2.30e-21 | 93.2 |
| Msa1173250 | MtrunA17_Chr8g0382901 | 27.686 | 242 | 161 | 6 | 27 | 261 | 485 | 719 | 2.43e-21 | 93.6 |
| Msa1173250 | MtrunA17_Chr8g0382901 | 26.054 | 261 | 165 | 6 | 8 | 261 | 1 | 240 | 1.00e-16 | 80.1 |
| Msa1173250 | MtrunA17_Chr3g0101711 | 27.074 | 229 | 159 | 4 | 34 | 261 | 37 | 258 | 2.48e-21 | 93.2 |
| Msa1173250 | MtrunA17_Chr8g0344191 | 28.194 | 227 | 149 | 5 | 14 | 232 | 51 | 271 | 3.25e-21 | 92.8 |
| Msa1173250 | MtrunA17_Chr8g0372251 | 29.237 | 236 | 139 | 6 | 28 | 254 | 31 | 247 | 3.39e-21 | 92.8 |
| Msa1173250 | MtrunA17_Chr3g0101671 | 28.054 | 221 | 149 | 4 | 9 | 223 | 8 | 224 | 4.89e-21 | 92.4 |
| Msa1173250 | MtrunA17_Chr3g0101751 | 29.565 | 230 | 146 | 7 | 6 | 226 | 9 | 231 | 5.17e-21 | 92.0 |
| Msa1173250 | MtrunA17_Chr3g0101571 | 28.634 | 227 | 147 | 7 | 31 | 253 | 33 | 248 | 5.18e-21 | 92.0 |
| Msa1173250 | MtrunA17_Chr3g0101801 | 27.039 | 233 | 153 | 5 | 1 | 229 | 15 | 234 | 5.99e-21 | 92.0 |
| Msa1173250 | MtrunA17_Chr5g0403321 | 25.926 | 243 | 167 | 5 | 26 | 261 | 26 | 262 | 6.50e-21 | 92.0 |
| Msa1173250 | MtrunA17_Chr3g0101821 | 28.571 | 245 | 158 | 7 | 6 | 240 | 2 | 239 | 9.00e-21 | 91.7 |
| Msa1173250 | MtrunA17_Chr1g0176861 | 48.315 | 89 | 46 | 0 | 3 | 91 | 6 | 94 | 9.46e-21 | 84.3 |
| Msa1173250 | MtrunA17_Chr3g0101631 | 24.242 | 264 | 191 | 6 | 11 | 269 | 11 | 270 | 1.16e-20 | 91.3 |
| Msa1173250 | MtrunA17_Chr8g0344151 | 26.556 | 241 | 157 | 7 | 32 | 258 | 34 | 268 | 2.01e-20 | 90.5 |
| Msa1173250 | MtrunA17_Chr5g0431671 | 26.423 | 246 | 171 | 5 | 30 | 272 | 34 | 272 | 2.52e-20 | 90.1 |
| Msa1173250 | MtrunA17_Chr3g0101721 | 27.376 | 263 | 176 | 7 | 10 | 265 | 14 | 268 | 4.48e-20 | 89.4 |
| Msa1173250 | MtrunA17_Chr4g0035921 | 26.838 | 272 | 182 | 9 | 6 | 271 | 11 | 271 | 4.75e-20 | 89.4 |
| Msa1173250 | MtrunA17_Chr3g0101651 | 27.477 | 222 | 155 | 4 | 34 | 253 | 38 | 255 | 4.79e-20 | 89.4 |
| Msa1173250 | MtrunA17_Chr3g0101621 | 27.232 | 224 | 155 | 4 | 7 | 226 | 3 | 222 | 6.61e-20 | 89.0 |
| Msa1173250 | MtrunA17_Chr5g0445451 | 26.848 | 257 | 178 | 6 | 8 | 262 | 13 | 261 | 6.96e-20 | 89.0 |
| Msa1173250 | MtrunA17_Chr4g0061381 | 26.941 | 219 | 146 | 4 | 54 | 261 | 51 | 266 | 7.58e-20 | 89.0 |
| Msa1173250 | MtrunA17_Chr1g0162801 | 25.940 | 266 | 184 | 7 | 9 | 267 | 8 | 267 | 8.72e-20 | 88.6 |
| Msa1173250 | MtrunA17_Chr3g0101761 | 26.459 | 257 | 174 | 6 | 3 | 254 | 7 | 253 | 1.05e-19 | 88.6 |
| Msa1173250 | MtrunA17_Chr3g0101661 | 26.715 | 277 | 191 | 6 | 1 | 269 | 1 | 273 | 1.11e-19 | 88.2 |
| Msa1173250 | MtrunA17_Chr1g0174451 | 25.271 | 277 | 189 | 8 | 1 | 266 | 5 | 274 | 1.23e-19 | 88.2 |
| Msa1173250 | MtrunA17_Chr8g0357431 | 29.557 | 203 | 128 | 6 | 30 | 226 | 33 | 226 | 1.55e-19 | 87.8 |
| Msa1173250 | MtrunA17_Chr3g0101691 | 26.054 | 261 | 179 | 6 | 11 | 265 | 11 | 263 | 1.75e-19 | 87.8 |
| Msa1173250 | MtrunA17_Chr5g0406651 | 31.081 | 148 | 97 | 2 | 15 | 161 | 15 | 158 | 1.82e-19 | 87.8 |
| Msa1173250 | MtrunA17_Chr3g0101701 | 26.667 | 240 | 168 | 5 | 34 | 269 | 38 | 273 | 3.11e-19 | 87.0 |
| Msa1173250 | MtrunA17_Chr4g0011921 | 28.025 | 157 | 110 | 2 | 6 | 161 | 3 | 157 | 3.56e-19 | 86.7 |
| Msa1173250 | MtrunA17_Chr1g0174441 | 25.094 | 267 | 193 | 4 | 7 | 267 | 27 | 292 | 3.97e-19 | 86.7 |
| Msa1173250 | MtrunA17_Chr5g0430081 | 27.200 | 250 | 180 | 1 | 10 | 259 | 11 | 258 | 4.03e-19 | 86.7 |
| Msa1173250 | MtrunA17_Chr3g0101601 | 27.228 | 202 | 142 | 3 | 26 | 226 | 28 | 225 | 4.85e-19 | 86.3 |
| Msa1173250 | MtrunA17_Chr5g0405001 | 22.901 | 262 | 192 | 4 | 7 | 266 | 19 | 272 | 5.70e-19 | 86.3 |
| Msa1173250 | MtrunA17_Chr5g0445751 | 31.579 | 152 | 103 | 1 | 9 | 159 | 19 | 170 | 7.47e-19 | 84.7 |
| Msa1173250 | MtrunA17_Chr6g0463801 | 31.481 | 162 | 108 | 2 | 26 | 186 | 29 | 188 | 8.31e-19 | 85.9 |
| Msa1173250 | MtrunA17_Chr7g0255531 | 24.896 | 241 | 165 | 6 | 12 | 239 | 9 | 246 | 9.42e-19 | 85.5 |
| Msa1173250 | MtrunA17_Chr8g0362701 | 26.119 | 268 | 189 | 3 | 2 | 264 | 6 | 269 | 1.38e-18 | 85.1 |
| Msa1173250 | MtrunA17_Chr3g0101831 | 25.941 | 239 | 170 | 5 | 3 | 239 | 7 | 240 | 1.58e-18 | 85.1 |
| Msa1173250 | MtrunA17_Chr4g0011861 | 22.822 | 241 | 181 | 3 | 26 | 261 | 21 | 261 | 2.02e-18 | 83.2 |
| Msa1173250 | MtrunA17_Chr1g0162811 | 28.977 | 176 | 115 | 3 | 9 | 176 | 5 | 178 | 3.51e-18 | 84.0 |
| Msa1173250 | MtrunA17_Chr1g0156101 | 23.664 | 262 | 175 | 5 | 26 | 268 | 24 | 279 | 3.74e-18 | 84.0 |
| Msa1173250 | MtrunA17_Chr4g0011871 | 31.387 | 137 | 93 | 1 | 26 | 161 | 21 | 157 | 5.16e-18 | 83.6 |
| Msa1173250 | MtrunA17_Chr5g0446161 | 25.664 | 226 | 155 | 5 | 9 | 231 | 14 | 229 | 6.34e-18 | 83.2 |
| Msa1173250 | MtrunA17_Chr7g0254641 | 22.078 | 231 | 172 | 2 | 20 | 244 | 25 | 253 | 7.25e-18 | 83.2 |
| Msa1173250 | MtrunA17_Chr4g0011931 | 27.742 | 155 | 107 | 3 | 7 | 159 | 4 | 155 | 7.83e-18 | 81.3 |
| Msa1173250 | MtrunA17_Chr5g0419691 | 23.673 | 245 | 173 | 5 | 26 | 261 | 21 | 260 | 8.90e-18 | 82.8 |
| Msa1173250 | MtrunA17_Chr4g0011901 | 29.104 | 134 | 94 | 1 | 29 | 161 | 24 | 157 | 1.13e-17 | 82.4 |
| Msa1173250 | MtrunA17_Chr4g0011981 | 32.593 | 135 | 86 | 3 | 35 | 165 | 30 | 163 | 1.81e-17 | 81.6 |
| Msa1173250 | MtrunA17_Chr4g0011961 | 29.114 | 158 | 107 | 3 | 6 | 161 | 3 | 157 | 2.51e-17 | 81.3 |
| Msa1173250 | MtrunA17_Chr5g0403331 | 22.394 | 259 | 192 | 6 | 15 | 269 | 16 | 269 | 2.80e-17 | 81.3 |
| Msa1173250 | MtrunA17_Chr1g0160861 | 40.659 | 91 | 52 | 1 | 168 | 256 | 9 | 99 | 2.81e-17 | 80.5 |
| Msa1173250 | MtrunA17_Chr8g0357421 | 26.423 | 246 | 158 | 7 | 7 | 244 | 8 | 238 | 3.03e-17 | 81.3 |
| Msa1173250 | MtrunA17_Chr4g0011881 | 28.378 | 148 | 101 | 2 | 15 | 161 | 15 | 158 | 3.56e-17 | 80.9 |
| Msa1173250 | MtrunA17_Chr4g0058281 | 22.761 | 268 | 197 | 4 | 6 | 269 | 20 | 281 | 4.69e-17 | 80.5 |
| Msa1173250 | MtrunA17_Chr3g0116681 | 26.000 | 200 | 143 | 3 | 27 | 223 | 33 | 230 | 4.82e-17 | 80.5 |
| Msa1173250 | MtrunA17_Chr4g0076161 | 23.048 | 269 | 193 | 6 | 6 | 269 | 11 | 270 | 5.76e-17 | 80.5 |
| Msa1173250 | MtrunA17_Chr5g0445531 | 26.582 | 237 | 165 | 5 | 34 | 266 | 38 | 269 | 8.60e-17 | 79.7 |
| Msa1173250 | MtrunA17_Chr1g0156081 | 29.496 | 139 | 97 | 1 | 26 | 163 | 48 | 186 | 1.53e-16 | 79.3 |
| Msa1173250 | MtrunA17_Chr1g0167321 | 26.891 | 238 | 166 | 5 | 26 | 260 | 26 | 258 | 1.72e-16 | 79.0 |
| Msa1173250 | MtrunA17_Chr3g0101811 | 24.380 | 242 | 177 | 4 | 30 | 269 | 33 | 270 | 1.99e-16 | 79.0 |
| Msa1173250 | MtrunA17_Chr5g0423601 | 39.024 | 82 | 50 | 0 | 117 | 198 | 1 | 82 | 2.62e-16 | 72.8 |
| Msa1173250 | MtrunA17_Chr5g0445441 | 25.514 | 243 | 168 | 6 | 30 | 266 | 75 | 310 | 4.55e-16 | 77.8 |
| Msa1173250 | MtrunA17_Chr3g0084921 | 21.970 | 264 | 197 | 4 | 2 | 261 | 6 | 264 | 5.56e-16 | 77.4 |
| Msa1173250 | MtrunA17_Chr3g0116741 | 23.853 | 218 | 160 | 4 | 15 | 229 | 34 | 248 | 6.83e-16 | 77.4 |
| Msa1173250 | MtrunA17_Chr7g0224561 | 23.629 | 237 | 173 | 3 | 34 | 269 | 31 | 260 | 7.36e-16 | 77.0 |
| Msa1173250 | MtrunA17_Chr3g0101731 | 26.667 | 225 | 152 | 6 | 3 | 223 | 7 | 222 | 7.94e-16 | 77.0 |
| Msa1173250 | MtrunA17_Chr1g0156061 | 30.769 | 130 | 89 | 1 | 35 | 163 | 56 | 185 | 8.00e-16 | 77.0 |
| Msa1173250 | MtrunA17_Chr4g0024771 | 26.230 | 244 | 160 | 7 | 35 | 273 | 39 | 267 | 9.97e-16 | 76.6 |
| Msa1173250 | MtrunA17_Chr7g0224551 | 23.629 | 237 | 173 | 3 | 34 | 269 | 31 | 260 | 1.11e-15 | 76.6 |
| Msa1173250 | MtrunA17_Chr4g0030701 | 21.992 | 241 | 186 | 1 | 29 | 267 | 30 | 270 | 1.72e-15 | 75.9 |
| Msa1173250 | MtrunA17_Chr1g0198191 | 23.188 | 276 | 183 | 8 | 6 | 271 | 21 | 277 | 2.04e-15 | 75.9 |
| Msa1173250 | MtrunA17_Chr6g0463791 | 28.049 | 164 | 108 | 6 | 10 | 165 | 8 | 169 | 2.66e-15 | 75.5 |
| Msa1173250 | MtrunA17_Chr2g0280261 | 31.579 | 133 | 90 | 1 | 26 | 157 | 26 | 158 | 3.58e-15 | 75.1 |
| Msa1173250 | MtrunA17_Chr2g0310371 | 27.586 | 145 | 102 | 1 | 10 | 151 | 1 | 145 | 7.37e-15 | 70.1 |
| Msa1173250 | MtrunA17_Chr4g0039391 | 24.779 | 226 | 156 | 5 | 56 | 272 | 57 | 277 | 1.02e-14 | 73.6 |
| Msa1173250 | MtrunA17_Chr5g0445381 | 23.673 | 245 | 178 | 5 | 30 | 272 | 65 | 302 | 1.12e-14 | 73.6 |
| Msa1173250 | MtrunA17_Chr5g0445421 | 30.058 | 173 | 116 | 3 | 8 | 178 | 87 | 256 | 2.30e-14 | 72.8 |
| Msa1173250 | MtrunA17_Chr1g0207841 | 22.277 | 202 | 155 | 1 | 56 | 255 | 60 | 261 | 2.60e-14 | 72.4 |
| Msa1173250 | MtrunA17_Chr5g0446151 | 28.030 | 132 | 94 | 1 | 28 | 158 | 35 | 166 | 2.80e-14 | 72.4 |
| Msa1173250 | MtrunA17_Chr6g0466941 | 27.491 | 291 | 182 | 11 | 1 | 271 | 1 | 282 | 3.28e-14 | 72.4 |
| Msa1173250 | MtrunA17_Chr4g0030741 | 21.923 | 260 | 191 | 4 | 11 | 269 | 41 | 289 | 3.86e-14 | 71.6 |
| Msa1173250 | MtrunA17_Chr6g0451681 | 28.090 | 178 | 118 | 5 | 1 | 170 | 29 | 204 | 4.53e-14 | 71.6 |
| Msa1173250 | MtrunA17_Chr6g0451741 | 22.662 | 278 | 186 | 8 | 14 | 269 | 43 | 313 | 7.56e-14 | 71.2 |
| Msa1173250 | MtrunA17_Chr5g0431631 | 34.746 | 118 | 75 | 1 | 26 | 141 | 42 | 159 | 7.73e-14 | 67.8 |
| Msa1173250 | MtrunA17_Chr6g0463611 | 22.222 | 261 | 187 | 9 | 16 | 269 | 30 | 281 | 7.80e-14 | 70.5 |
| Msa1173250 | MtrunA17_Chr2g0304871 | 27.381 | 168 | 110 | 5 | 14 | 173 | 17 | 180 | 8.22e-14 | 70.9 |
| Msa1173250 | MtrunA17_Chr5g0445411 | 29.851 | 134 | 92 | 1 | 30 | 161 | 41 | 174 | 1.16e-13 | 67.8 |
| Msa1173250 | MtrunA17_Chr1g0207851 | 23.711 | 194 | 143 | 3 | 65 | 255 | 69 | 260 | 6.66e-13 | 67.8 |
| Msa1173250 | MtrunA17_Chr4g0046691 | 23.171 | 246 | 182 | 4 | 26 | 266 | 30 | 273 | 8.53e-13 | 67.4 |
| Msa1173250 | MtrunA17_Chr5g0430051 | 41.304 | 92 | 54 | 0 | 10 | 101 | 14 | 105 | 1.38e-12 | 63.2 |
| Msa1173250 | MtrunA17_Chr4g0020041 | 29.221 | 154 | 97 | 4 | 15 | 158 | 11 | 162 | 1.38e-12 | 67.4 |
| Msa1173250 | MtrunA17_Chr4g0030711 | 20.197 | 203 | 160 | 1 | 61 | 261 | 64 | 266 | 1.98e-12 | 67.0 |
| Msa1173250 | MtrunA17_Chr3g0107561 | 25.448 | 279 | 185 | 7 | 1 | 256 | 1 | 279 | 2.61e-12 | 65.9 |
| Msa1173250 | MtrunA17_Chr4g0058231 | 22.273 | 220 | 168 | 2 | 8 | 225 | 1 | 219 | 2.91e-12 | 66.2 |
| Msa1173250 | MtrunA17_Chr4g0058261 | 22.134 | 253 | 185 | 6 | 18 | 264 | 49 | 295 | 3.10e-12 | 66.2 |
| Msa1173250 | MtrunA17_Chr4g0058191 | 22.053 | 263 | 195 | 5 | 8 | 266 | 1 | 257 | 3.39e-12 | 66.2 |
| Msa1173250 | MtrunA17_Chr5g0401691 | 24.167 | 240 | 164 | 6 | 3 | 235 | 28 | 256 | 4.20e-12 | 65.9 |
| Msa1173250 | MtrunA17_Chr3g0082701 | 23.695 | 249 | 172 | 5 | 2 | 232 | 6 | 254 | 4.59e-12 | 65.9 |
| Msa1173250 | MtrunA17_Chr6g0451641 | 24.219 | 256 | 169 | 9 | 16 | 253 | 18 | 266 | 7.51e-12 | 65.1 |
| Msa1173250 | MtrunA17_Chr8g0362481 | 23.383 | 201 | 148 | 2 | 69 | 264 | 1 | 200 | 1.26e-11 | 64.3 |
| Msa1173250 | MtrunA17_Chr4g0058201 | 26.027 | 146 | 108 | 0 | 34 | 179 | 28 | 173 | 1.50e-11 | 64.3 |
| Msa1173250 | MtrunA17_Chr3g0101741 | 27.895 | 190 | 126 | 5 | 69 | 254 | 1 | 183 | 2.07e-11 | 63.5 |
| Msa1173250 | MtrunA17_Chr7g0218601 | 25.984 | 127 | 93 | 1 | 30 | 155 | 30 | 156 | 2.46e-11 | 63.5 |
| Msa1173250 | MtrunA17_Chr2g0296651 | 23.431 | 239 | 166 | 5 | 8 | 236 | 12 | 243 | 2.67e-11 | 63.5 |
| Msa1173250 | MtrunA17_Chr5g0431501 | 23.404 | 141 | 107 | 1 | 34 | 173 | 33 | 173 | 2.71e-11 | 63.5 |
| Msa1173250 | MtrunA17_Chr5g0431461 | 23.404 | 141 | 107 | 1 | 34 | 173 | 33 | 173 | 2.71e-11 | 63.5 |
| Msa1173250 | MtrunA17_Chr5g0402971 | 23.673 | 245 | 167 | 8 | 35 | 264 | 41 | 280 | 2.86e-11 | 62.8 |
| Msa1173250 | MtrunA17_Chr6g0451691 | 26.623 | 154 | 100 | 5 | 14 | 159 | 24 | 172 | 3.11e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173250 | AT3G61040.2 | 33.061 | 245 | 158 | 2 | 25 | 264 | 24 | 267 | 6.11e-44 | 154 |
| Msa1173250 | AT3G61040.1 | 33.061 | 245 | 158 | 2 | 25 | 264 | 24 | 267 | 3.60e-43 | 154 |
| Msa1173250 | AT2G45550.1 | 30.357 | 280 | 181 | 5 | 1 | 266 | 1 | 280 | 1.85e-40 | 146 |
| Msa1173250 | AT2G45560.2 | 31.535 | 241 | 156 | 3 | 1 | 232 | 1 | 241 | 3.93e-38 | 136 |
| Msa1173250 | AT2G45560.3 | 31.250 | 240 | 156 | 3 | 1 | 231 | 1 | 240 | 6.08e-38 | 134 |
| Msa1173250 | AT2G45560.1 | 31.535 | 241 | 156 | 3 | 1 | 232 | 1 | 241 | 1.54e-36 | 136 |
| Msa1173250 | AT2G45580.3 | 32.719 | 217 | 142 | 1 | 44 | 256 | 48 | 264 | 2.24e-34 | 128 |
| Msa1173250 | AT2G45580.1 | 32.719 | 217 | 142 | 1 | 44 | 256 | 48 | 264 | 6.37e-34 | 129 |
| Msa1173250 | AT3G52970.1 | 27.984 | 243 | 170 | 3 | 8 | 245 | 10 | 252 | 2.26e-33 | 127 |
| Msa1173250 | AT2G45570.1 | 31.439 | 264 | 173 | 4 | 1 | 256 | 1 | 264 | 3.17e-32 | 124 |
| Msa1173250 | AT4G12320.1 | 28.731 | 268 | 180 | 4 | 11 | 273 | 20 | 281 | 9.05e-32 | 123 |
| Msa1173250 | AT4G12310.1 | 30.734 | 218 | 143 | 2 | 60 | 273 | 70 | 283 | 1.07e-31 | 122 |
| Msa1173250 | AT3G52970.2 | 26.459 | 257 | 170 | 3 | 8 | 245 | 10 | 266 | 2.36e-31 | 122 |
| Msa1173250 | AT1G33720.1 | 26.429 | 280 | 192 | 5 | 1 | 266 | 1 | 280 | 3.60e-31 | 121 |
| Msa1173250 | AT4G12300.1 | 29.536 | 237 | 159 | 2 | 34 | 266 | 42 | 274 | 9.93e-31 | 120 |
| Msa1173250 | AT4G12330.1 | 30.918 | 207 | 136 | 2 | 61 | 260 | 73 | 279 | 2.04e-30 | 119 |
| Msa1173250 | AT5G44620.1 | 28.030 | 264 | 182 | 2 | 1 | 260 | 17 | 276 | 4.04e-30 | 118 |
| Msa1173250 | AT5G07990.1 | 27.848 | 237 | 161 | 6 | 4 | 233 | 1 | 234 | 2.44e-26 | 107 |
| Msa1173250 | AT4G22710.1 | 27.619 | 210 | 143 | 3 | 65 | 269 | 85 | 290 | 7.35e-25 | 103 |
| Msa1173250 | AT4G22690.1 | 27.619 | 210 | 143 | 3 | 65 | 269 | 116 | 321 | 1.71e-24 | 102 |
| Msa1173250 | AT4G13770.1 | 26.054 | 261 | 174 | 7 | 7 | 259 | 6 | 255 | 5.66e-23 | 98.2 |
| Msa1173250 | AT3G26310.1 | 25.547 | 274 | 187 | 6 | 1 | 266 | 1 | 265 | 6.88e-22 | 95.1 |
| Msa1173250 | AT3G26300.1 | 24.896 | 241 | 174 | 3 | 6 | 239 | 3 | 243 | 1.60e-21 | 94.0 |
| Msa1173250 | AT5G57260.1 | 25.628 | 199 | 146 | 1 | 27 | 223 | 23 | 221 | 1.65e-20 | 91.3 |
| Msa1173250 | AT3G26330.1 | 26.016 | 246 | 167 | 5 | 29 | 267 | 26 | 263 | 3.17e-20 | 90.1 |
| Msa1173250 | AT4G37310.1 | 26.744 | 258 | 178 | 4 | 8 | 254 | 4 | 261 | 1.56e-19 | 88.2 |
| Msa1173250 | AT3G26320.1 | 24.907 | 269 | 168 | 7 | 14 | 267 | 14 | 263 | 2.32e-19 | 87.8 |
| Msa1173250 | AT5G06900.1 | 25.591 | 254 | 179 | 3 | 9 | 257 | 9 | 257 | 3.47e-19 | 87.4 |
| Msa1173250 | AT4G31500.1 | 26.070 | 257 | 170 | 8 | 11 | 259 | 10 | 254 | 4.09e-19 | 87.0 |
| Msa1173250 | AT5G25130.1 | 25.322 | 233 | 161 | 5 | 28 | 254 | 23 | 248 | 7.88e-19 | 86.3 |
| Msa1173250 | AT2G02580.1 | 25.806 | 217 | 156 | 2 | 9 | 223 | 9 | 222 | 9.08e-19 | 85.9 |
| Msa1173250 | AT5G06905.1 | 25.862 | 232 | 161 | 4 | 1 | 230 | 1 | 223 | 5.22e-18 | 84.0 |
| Msa1173250 | AT5G25120.1 | 21.834 | 229 | 176 | 2 | 27 | 254 | 22 | 248 | 1.02e-17 | 82.8 |
| Msa1173250 | AT4G36220.1 | 24.312 | 218 | 157 | 3 | 41 | 256 | 47 | 258 | 5.14e-17 | 80.9 |
| Msa1173250 | AT5G67310.1 | 22.433 | 263 | 198 | 5 | 4 | 260 | 12 | 274 | 6.44e-17 | 80.5 |
| Msa1173250 | AT1G74540.1 | 23.684 | 228 | 160 | 4 | 8 | 226 | 1 | 223 | 8.57e-17 | 80.1 |
| Msa1173250 | AT1G13080.1 | 25.461 | 271 | 187 | 5 | 12 | 269 | 1 | 269 | 2.45e-16 | 79.0 |
| Msa1173250 | AT2G46660.1 | 27.309 | 249 | 172 | 7 | 18 | 262 | 55 | 298 | 3.04e-16 | 78.6 |
| Msa1173250 | AT3G26170.1 | 23.019 | 265 | 194 | 4 | 9 | 266 | 8 | 269 | 4.47e-16 | 78.2 |
| Msa1173250 | AT5G25140.1 | 22.172 | 221 | 169 | 2 | 8 | 225 | 1 | 221 | 4.77e-16 | 78.2 |
| Msa1173250 | AT2G40890.1 | 24.336 | 226 | 153 | 3 | 28 | 235 | 21 | 246 | 5.44e-16 | 77.8 |
| Msa1173250 | AT5G42590.1 | 22.422 | 223 | 170 | 2 | 6 | 225 | 2 | 224 | 5.50e-16 | 77.8 |
| Msa1173250 | AT3G26290.1 | 24.597 | 248 | 176 | 5 | 26 | 266 | 23 | 266 | 7.46e-16 | 77.4 |
| Msa1173250 | AT3G26290.2 | 24.597 | 248 | 176 | 5 | 26 | 266 | 36 | 279 | 8.50e-16 | 77.4 |
| Msa1173250 | AT1G13110.1 | 24.101 | 278 | 189 | 5 | 8 | 272 | 3 | 271 | 1.16e-15 | 77.0 |
| Msa1173250 | AT3G53280.1 | 25.532 | 235 | 171 | 3 | 30 | 260 | 24 | 258 | 1.38e-15 | 76.6 |
| Msa1173250 | AT5G25180.1 | 23.333 | 240 | 178 | 4 | 18 | 254 | 12 | 248 | 1.54e-15 | 76.6 |
| Msa1173250 | AT3G26180.1 | 23.048 | 269 | 197 | 4 | 8 | 266 | 1 | 269 | 1.76e-15 | 76.3 |
| Msa1173250 | AT3G44250.1 | 27.803 | 223 | 154 | 4 | 30 | 248 | 24 | 243 | 3.63e-15 | 75.5 |
| Msa1173250 | AT3G48280.1 | 22.814 | 263 | 196 | 3 | 7 | 269 | 3 | 258 | 4.74e-15 | 75.1 |
| Msa1173250 | AT3G10560.1 | 23.077 | 234 | 165 | 6 | 6 | 229 | 17 | 245 | 1.26e-14 | 73.9 |
| Msa1173250 | AT4G31940.1 | 25.926 | 270 | 177 | 7 | 11 | 261 | 8 | 273 | 1.33e-14 | 73.9 |
| Msa1173250 | AT5G04330.1 | 23.729 | 236 | 163 | 5 | 35 | 261 | 33 | 260 | 1.75e-14 | 73.6 |
| Msa1173250 | AT5G57220.1 | 25.424 | 236 | 162 | 6 | 1 | 228 | 1 | 230 | 1.88e-14 | 73.2 |
| Msa1173250 | AT3G26280.2 | 23.445 | 209 | 158 | 1 | 17 | 223 | 32 | 240 | 4.76e-14 | 72.0 |
| Msa1173250 | AT4G31970.1 | 23.420 | 269 | 184 | 6 | 11 | 261 | 8 | 272 | 4.77e-14 | 72.0 |
| Msa1173250 | AT1G01280.1 | 20.763 | 236 | 180 | 1 | 39 | 267 | 37 | 272 | 5.16e-14 | 72.0 |
| Msa1173250 | AT3G26280.1 | 23.445 | 209 | 158 | 1 | 17 | 223 | 15 | 223 | 5.22e-14 | 72.0 |
| Msa1173250 | AT1G74550.1 | 21.267 | 221 | 169 | 2 | 8 | 226 | 1 | 218 | 5.35e-14 | 72.0 |
| Msa1173250 | AT3G26200.1 | 26.500 | 200 | 140 | 2 | 30 | 224 | 24 | 221 | 1.26e-13 | 70.9 |
| Msa1173250 | AT1G11610.1 | 23.786 | 206 | 150 | 4 | 27 | 229 | 28 | 229 | 1.34e-13 | 70.9 |
| Msa1173250 | AT1G11610.2 | 23.786 | 206 | 150 | 4 | 27 | 229 | 28 | 229 | 1.39e-13 | 70.9 |
| Msa1173250 | AT4G37410.1 | 22.749 | 211 | 153 | 5 | 27 | 228 | 23 | 232 | 1.52e-13 | 70.5 |
| Msa1173250 | AT3G26190.1 | 25.243 | 206 | 147 | 2 | 24 | 224 | 18 | 221 | 1.53e-13 | 70.5 |
| Msa1173250 | AT1G01190.2 | 29.536 | 237 | 153 | 9 | 32 | 259 | 75 | 306 | 2.19e-13 | 70.1 |
| Msa1173250 | AT1G01190.1 | 29.536 | 237 | 153 | 9 | 32 | 259 | 70 | 301 | 2.22e-13 | 70.1 |
| Msa1173250 | AT4G13310.2 | 20.264 | 227 | 178 | 2 | 22 | 245 | 20 | 246 | 2.50e-13 | 69.7 |
| Msa1173250 | AT4G13310.1 | 20.264 | 227 | 178 | 2 | 22 | 245 | 20 | 246 | 2.74e-13 | 69.7 |
| Msa1173250 | AT2G30770.1 | 21.983 | 232 | 171 | 6 | 34 | 259 | 33 | 260 | 2.87e-13 | 69.7 |
| Msa1173250 | AT4G37430.1 | 23.148 | 216 | 151 | 5 | 27 | 228 | 21 | 235 | 3.80e-13 | 69.3 |
| Msa1173250 | AT5G10600.1 | 24.364 | 275 | 176 | 10 | 8 | 262 | 23 | 285 | 4.29e-13 | 69.3 |
| Msa1173250 | AT2G23220.1 | 23.445 | 209 | 150 | 4 | 30 | 228 | 42 | 250 | 7.83e-13 | 68.6 |
| Msa1173250 | AT3G26270.1 | 23.109 | 238 | 181 | 1 | 26 | 261 | 24 | 261 | 9.46e-13 | 68.2 |
| Msa1173250 | AT3G48290.1 | 24.648 | 142 | 105 | 1 | 24 | 165 | 25 | 164 | 1.38e-12 | 67.8 |
| Msa1173250 | AT3G48290.2 | 24.648 | 142 | 105 | 1 | 24 | 165 | 25 | 164 | 1.53e-12 | 67.8 |
| Msa1173250 | AT3G48320.1 | 21.818 | 220 | 164 | 4 | 10 | 229 | 12 | 223 | 1.53e-12 | 67.8 |
| Msa1173250 | AT2G25160.2 | 30.769 | 143 | 93 | 2 | 7 | 144 | 4 | 145 | 1.82e-12 | 67.4 |
| Msa1173250 | AT2G25160.1 | 30.769 | 143 | 93 | 2 | 7 | 144 | 4 | 145 | 1.88e-12 | 67.4 |
| Msa1173250 | AT5G04660.1 | 24.623 | 199 | 139 | 4 | 63 | 255 | 73 | 266 | 1.99e-12 | 67.4 |
| Msa1173250 | AT4G13290.1 | 21.586 | 227 | 175 | 2 | 22 | 245 | 21 | 247 | 2.95e-12 | 66.6 |
| Msa1173250 | AT1G33730.1 | 25.926 | 135 | 96 | 2 | 136 | 266 | 5 | 139 | 4.29e-12 | 65.9 |
| Msa1173250 | AT1G33730.2 | 25.926 | 135 | 96 | 2 | 136 | 266 | 5 | 139 | 4.29e-12 | 65.9 |
| Msa1173250 | AT1G13090.1 | 26.190 | 210 | 134 | 4 | 28 | 225 | 22 | 222 | 5.15e-12 | 65.5 |
| Msa1173250 | AT2G24180.1 | 25.381 | 197 | 145 | 2 | 29 | 223 | 31 | 227 | 8.67e-12 | 65.5 |
| Msa1173250 | AT1G13090.2 | 26.190 | 210 | 134 | 4 | 28 | 225 | 22 | 222 | 1.04e-11 | 65.1 |
| Msa1173250 | AT5G24950.1 | 20.870 | 230 | 180 | 2 | 34 | 261 | 32 | 261 | 1.21e-11 | 65.1 |
| Msa1173250 | AT4G37360.1 | 23.810 | 231 | 163 | 7 | 6 | 225 | 3 | 231 | 1.95e-11 | 64.3 |
| Msa1173250 | AT3G26160.1 | 22.374 | 219 | 164 | 2 | 9 | 224 | 8 | 223 | 2.51e-11 | 63.9 |
| Msa1173250 | AT2G30750.1 | 25.984 | 127 | 90 | 2 | 34 | 158 | 33 | 157 | 2.71e-11 | 63.9 |
| Msa1173250 | AT3G61035.1 | 25.328 | 229 | 151 | 7 | 43 | 265 | 51 | 265 | 4.18e-11 | 62.8 |
| Msa1173250 | AT3G48270.1 | 20.098 | 204 | 157 | 3 | 26 | 229 | 25 | 222 | 4.98e-11 | 63.2 |
| Msa1173250 | AT3G26150.1 | 20.238 | 252 | 195 | 2 | 9 | 257 | 8 | 256 | 5.49e-11 | 63.2 |
| Msa1173250 | AT5G24960.1 | 19.247 | 239 | 189 | 3 | 26 | 261 | 25 | 262 | 6.38e-11 | 62.8 |
| Msa1173250 | AT3G20140.1 | 21.765 | 170 | 132 | 1 | 29 | 197 | 37 | 206 | 7.64e-11 | 62.4 |
| Msa1173250 | AT5G24960.2 | 19.247 | 239 | 189 | 3 | 26 | 261 | 25 | 262 | 8.06e-11 | 62.4 |
| Msa1173250 | AT5G42580.1 | 25.000 | 132 | 99 | 0 | 54 | 185 | 60 | 191 | 9.08e-11 | 62.4 |
Find 28 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCTTTGGCAACATCTT+AGG | 0.253021 | 8_1:+3521650 | Msa1173250:CDS |
| TTCTCTACCAAGACTCTTGA+TGG | 0.280959 | 8_1:+3521694 | Msa1173250:CDS |
| TTCAAAAGTGTTCTATGCTT+TGG | 0.301447 | 8_1:+3522005 | Msa1173250:CDS |
| TGTTGCCAAAGAGGTGAAAA+TGG | 0.310336 | 8_1:-3521643 | None:intergenic |
| CATAACTTAATGCGCATAAT+AGG | 0.313177 | 8_1:-3521481 | None:intergenic |
| GCAAAGTTTGCTAAGGTCTA+TGG | 0.338310 | 8_1:+3521457 | Msa1173250:CDS |
| TGCATTGTCATGTTCTTCAT+TGG | 0.364623 | 8_1:+3521322 | Msa1173250:CDS |
| TTGTGAGTTGTAGTGTTATC+AGG | 0.397170 | 8_1:-3521592 | None:intergenic |
| TGTTGGAAGAGCTGCTTTCA+AGG | 0.399048 | 8_1:+3521798 | Msa1173250:CDS |
| ATGCATAAAAGCAGCTTAAC+CGG | 0.422718 | 8_1:+3521763 | Msa1173250:CDS |
| TGTGTCTTCTAATGCCTTGT+GGG | 0.426560 | 8_1:-3521969 | None:intergenic |
| ATGTGATGATGAGATGATTA+TGG | 0.455610 | 8_1:-3521515 | None:intergenic |
| AATCATCTCATCATCACATA+TGG | 0.458125 | 8_1:+3521519 | Msa1173250:CDS |
| TTCCTAAGATGTTGCCAAAG+AGG | 0.478700 | 8_1:-3521652 | None:intergenic |
| TCCAACATCAACAGCTTCAC+CGG | 0.481843 | 8_1:-3521782 | None:intergenic |
| TGACAATGCATGTCAACAAA+AGG | 0.511959 | 8_1:-3521309 | None:intergenic |
| TTGACTTCCATCAAGAGTCT+TGG | 0.512046 | 8_1:-3521701 | None:intergenic |
| ATTTCAGATATGGATTATGT+TGG | 0.514460 | 8_1:+3521274 | None:intergenic |
| GGGAAATGATCAGCAATGTT+TGG | 0.514705 | 8_1:-3521928 | None:intergenic |
| AACACTTGCAAAGTTTGCTA+AGG | 0.524211 | 8_1:+3521450 | Msa1173250:CDS |
| TCAACTCTATTAAGTGCTGT+TGG | 0.527182 | 8_1:+3521901 | Msa1173250:CDS |
| GTGTGTCTTCTAATGCCTTG+TGG | 0.537078 | 8_1:-3521970 | None:intergenic |
| GTTGCCAAAGAGGTGAAAAT+GGG | 0.550649 | 8_1:-3521642 | None:intergenic |
| ACCGGTGAAGCTGTTGATGT+TGG | 0.556936 | 8_1:+3521781 | Msa1173250:CDS |
| AGTTGTAGTGTTATCAGGAA+CGG | 0.594813 | 8_1:-3521587 | None:intergenic |
| TCGAACTACAAGCTTCCACC+AGG | 0.603802 | 8_1:+3521370 | Msa1173250:CDS |
| AACTTTGCAAGTGTTTGTTG+TGG | 0.637386 | 8_1:-3521442 | None:intergenic |
| GCCAAAGAGGTGAAAATGGG+AGG | 0.644896 | 8_1:-3521639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTAAAAAGAATCTCTT+TGG | - | chr8_1:3521545-3521564 | None:intergenic | 20.0% |
| !! | ATGAACACTACTAAAAAAAT+TGG | + | chr8_1:3522048-3522067 | Msa1173250:CDS | 20.0% |
| !! | TGAACACTACTAAAAAAATT+GGG | + | chr8_1:3522049-3522068 | Msa1173250:CDS | 20.0% |
| !! | ATTTGTAAAAAGAATCTCTT+TGG | - | chr8_1:3521545-3521564 | None:intergenic | 20.0% |
| !! | ATGAACACTACTAAAAAAAT+TGG | + | chr8_1:3522048-3522067 | Msa1173250:CDS | 20.0% |
| !! | TGAACACTACTAAAAAAATT+GGG | + | chr8_1:3522049-3522068 | Msa1173250:CDS | 20.0% |
| ! | AAAAAAATTGGGAATAGAGA+CGG | + | chr8_1:3522060-3522079 | Msa1173250:CDS | 25.0% |
| ! | AAAAAAATTGGGAATAGAGA+CGG | + | chr8_1:3522060-3522079 | Msa1173250:CDS | 25.0% |
| ! | GACATGATAGTGAAAAAAGA+AGG | - | chr8_1:3521397-3521416 | None:intergenic | 30.0% |
| CATAACTTAATGCGCATAAT+AGG | - | chr8_1:3521484-3521503 | None:intergenic | 30.0% | |
| ! | ATGTGATGATGAGATGATTA+TGG | - | chr8_1:3521518-3521537 | None:intergenic | 30.0% |
| AATCATCTCATCATCACATA+TGG | + | chr8_1:3521519-3521538 | Msa1173250:CDS | 30.0% | |
| !! | TTCAAAAGTGTTCTATGCTT+TGG | + | chr8_1:3522005-3522024 | Msa1173250:CDS | 30.0% |
| AAAAAATTGGGAATAGAGAC+GGG | + | chr8_1:3522061-3522080 | Msa1173250:CDS | 30.0% | |
| ! | GACATGATAGTGAAAAAAGA+AGG | - | chr8_1:3521397-3521416 | None:intergenic | 30.0% |
| CATAACTTAATGCGCATAAT+AGG | - | chr8_1:3521484-3521503 | None:intergenic | 30.0% | |
| ! | ATGTGATGATGAGATGATTA+TGG | - | chr8_1:3521518-3521537 | None:intergenic | 30.0% |
| AATCATCTCATCATCACATA+TGG | + | chr8_1:3521519-3521538 | Msa1173250:CDS | 30.0% | |
| !! | TTCAAAAGTGTTCTATGCTT+TGG | + | chr8_1:3522005-3522024 | Msa1173250:CDS | 30.0% |
| AAAAAATTGGGAATAGAGAC+GGG | + | chr8_1:3522061-3522080 | Msa1173250:CDS | 30.0% | |
| TGACAATGCATGTCAACAAA+AGG | - | chr8_1:3521312-3521331 | None:intergenic | 35.0% | |
| TGCATTGTCATGTTCTTCAT+TGG | + | chr8_1:3521322-3521341 | Msa1173250:CDS | 35.0% | |
| ATAGTGAAAAAAGAAGGTCC+TGG | - | chr8_1:3521391-3521410 | None:intergenic | 35.0% | |
| ! | AACTTTGCAAGTGTTTGTTG+TGG | - | chr8_1:3521445-3521464 | None:intergenic | 35.0% |
| !! | AACACTTGCAAAGTTTGCTA+AGG | + | chr8_1:3521450-3521469 | Msa1173250:CDS | 35.0% |
| AGTTGTAGTGTTATCAGGAA+CGG | - | chr8_1:3521590-3521609 | None:intergenic | 35.0% | |
| TTGTGAGTTGTAGTGTTATC+AGG | - | chr8_1:3521595-3521614 | None:intergenic | 35.0% | |
| ATGCATAAAAGCAGCTTAAC+CGG | + | chr8_1:3521763-3521782 | Msa1173250:CDS | 35.0% | |
| ! | TCAACTCTATTAAGTGCTGT+TGG | + | chr8_1:3521901-3521920 | Msa1173250:CDS | 35.0% |
| GGTCAAAAATCTTCAACACT+GGG | - | chr8_1:3521951-3521970 | None:intergenic | 35.0% | |
| ! | TTGAAGATTTTTGACCCACA+AGG | + | chr8_1:3521955-3521974 | Msa1173250:CDS | 35.0% |
| TGACAATGCATGTCAACAAA+AGG | - | chr8_1:3521312-3521331 | None:intergenic | 35.0% | |
| TGCATTGTCATGTTCTTCAT+TGG | + | chr8_1:3521322-3521341 | Msa1173250:CDS | 35.0% | |
| ATAGTGAAAAAAGAAGGTCC+TGG | - | chr8_1:3521391-3521410 | None:intergenic | 35.0% | |
| ! | AACTTTGCAAGTGTTTGTTG+TGG | - | chr8_1:3521445-3521464 | None:intergenic | 35.0% |
| !! | AACACTTGCAAAGTTTGCTA+AGG | + | chr8_1:3521450-3521469 | Msa1173250:CDS | 35.0% |
| AGTTGTAGTGTTATCAGGAA+CGG | - | chr8_1:3521590-3521609 | None:intergenic | 35.0% | |
| TTGTGAGTTGTAGTGTTATC+AGG | - | chr8_1:3521595-3521614 | None:intergenic | 35.0% | |
| ATGCATAAAAGCAGCTTAAC+CGG | + | chr8_1:3521763-3521782 | Msa1173250:CDS | 35.0% | |
| ! | TCAACTCTATTAAGTGCTGT+TGG | + | chr8_1:3521901-3521920 | Msa1173250:CDS | 35.0% |
| GGTCAAAAATCTTCAACACT+GGG | - | chr8_1:3521951-3521970 | None:intergenic | 35.0% | |
| ! | TTGAAGATTTTTGACCCACA+AGG | + | chr8_1:3521955-3521974 | Msa1173250:CDS | 35.0% |
| !! | GCAAAGTTTGCTAAGGTCTA+TGG | + | chr8_1:3521457-3521476 | Msa1173250:CDS | 40.0% |
| GTTGCCAAAGAGGTGAAAAT+GGG | - | chr8_1:3521645-3521664 | None:intergenic | 40.0% | |
| TGTTGCCAAAGAGGTGAAAA+TGG | - | chr8_1:3521646-3521665 | None:intergenic | 40.0% | |
| TTCCTAAGATGTTGCCAAAG+AGG | - | chr8_1:3521655-3521674 | None:intergenic | 40.0% | |
| TTCTCTACCAAGACTCTTGA+TGG | + | chr8_1:3521694-3521713 | Msa1173250:CDS | 40.0% | |
| TTGACTTCCATCAAGAGTCT+TGG | - | chr8_1:3521704-3521723 | None:intergenic | 40.0% | |
| GGGAAATGATCAGCAATGTT+TGG | - | chr8_1:3521931-3521950 | None:intergenic | 40.0% | |
| GGGTCAAAAATCTTCAACAC+TGG | - | chr8_1:3521952-3521971 | None:intergenic | 40.0% | |
| TGTGTCTTCTAATGCCTTGT+GGG | - | chr8_1:3521972-3521991 | None:intergenic | 40.0% | |
| !! | GCAAAGTTTGCTAAGGTCTA+TGG | + | chr8_1:3521457-3521476 | Msa1173250:CDS | 40.0% |
| GTTGCCAAAGAGGTGAAAAT+GGG | - | chr8_1:3521645-3521664 | None:intergenic | 40.0% | |
| TGTTGCCAAAGAGGTGAAAA+TGG | - | chr8_1:3521646-3521665 | None:intergenic | 40.0% | |
| TTCCTAAGATGTTGCCAAAG+AGG | - | chr8_1:3521655-3521674 | None:intergenic | 40.0% | |
| TTCTCTACCAAGACTCTTGA+TGG | + | chr8_1:3521694-3521713 | Msa1173250:CDS | 40.0% | |
| TTGACTTCCATCAAGAGTCT+TGG | - | chr8_1:3521704-3521723 | None:intergenic | 40.0% | |
| GGGAAATGATCAGCAATGTT+TGG | - | chr8_1:3521931-3521950 | None:intergenic | 40.0% | |
| GGGTCAAAAATCTTCAACAC+TGG | - | chr8_1:3521952-3521971 | None:intergenic | 40.0% | |
| TGTGTCTTCTAATGCCTTGT+GGG | - | chr8_1:3521972-3521991 | None:intergenic | 40.0% | |
| GTGAAAAAAGAAGGTCCTGG+TGG | - | chr8_1:3521388-3521407 | None:intergenic | 45.0% | |
| ! | TCCTCCCATTTTCACCTCTT+TGG | + | chr8_1:3521638-3521657 | Msa1173250:CDS | 45.0% |
| CACCTCTTTGGCAACATCTT+AGG | + | chr8_1:3521650-3521669 | Msa1173250:CDS | 45.0% | |
| TCCAACATCAACAGCTTCAC+CGG | - | chr8_1:3521785-3521804 | None:intergenic | 45.0% | |
| ! | TGTTGGAAGAGCTGCTTTCA+AGG | + | chr8_1:3521798-3521817 | Msa1173250:CDS | 45.0% |
| GTGTGTCTTCTAATGCCTTG+TGG | - | chr8_1:3521973-3521992 | None:intergenic | 45.0% | |
| GTGAAAAAAGAAGGTCCTGG+TGG | - | chr8_1:3521388-3521407 | None:intergenic | 45.0% | |
| ! | TCCTCCCATTTTCACCTCTT+TGG | + | chr8_1:3521638-3521657 | Msa1173250:CDS | 45.0% |
| CACCTCTTTGGCAACATCTT+AGG | + | chr8_1:3521650-3521669 | Msa1173250:CDS | 45.0% | |
| TCCAACATCAACAGCTTCAC+CGG | - | chr8_1:3521785-3521804 | None:intergenic | 45.0% | |
| ! | TGTTGGAAGAGCTGCTTTCA+AGG | + | chr8_1:3521798-3521817 | Msa1173250:CDS | 45.0% |
| GTGTGTCTTCTAATGCCTTG+TGG | - | chr8_1:3521973-3521992 | None:intergenic | 45.0% | |
| TCGAACTACAAGCTTCCACC+AGG | + | chr8_1:3521370-3521389 | Msa1173250:CDS | 50.0% | |
| GCCAAAGAGGTGAAAATGGG+AGG | - | chr8_1:3521642-3521661 | None:intergenic | 50.0% | |
| ACCGGTGAAGCTGTTGATGT+TGG | + | chr8_1:3521781-3521800 | Msa1173250:CDS | 50.0% | |
| TCGAACTACAAGCTTCCACC+AGG | + | chr8_1:3521370-3521389 | Msa1173250:CDS | 50.0% | |
| GCCAAAGAGGTGAAAATGGG+AGG | - | chr8_1:3521642-3521661 | None:intergenic | 50.0% | |
| ACCGGTGAAGCTGTTGATGT+TGG | + | chr8_1:3521781-3521800 | Msa1173250:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 3521283 | 3522104 | 3521283 | ID=Msa1173250;Name=Msa1173250 |
| chr8_1 | mRNA | 3521283 | 3522104 | 3521283 | ID=Msa1173250-mRNA-1;Parent=Msa1173250;Name=Msa1173250-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|273 |
| chr8_1 | exon | 3521283 | 3522104 | 3521283 | ID=Msa1173250-mRNA-1:exon:1261;Parent=Msa1173250-mRNA-1 |
| chr8_1 | CDS | 3521283 | 3522104 | 3521283 | ID=Msa1173250-mRNA-1:cds;Parent=Msa1173250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
