AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0037810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037810 MtrunA17_Chr1g0212361 94.942 771 8 3 1 768 1 743 0.0 1491
Msa0037810 MtrunA17_Chr1g0212361 94.615 130 7 0 766 895 614 743 4.09e-74 258
Msa0037810 MtrunA17_Chr8g0374081 31.633 686 418 20 103 749 75 748 1.84e-85 290
Msa0037810 MtrunA17_Chr8g0374081 40.541 111 64 2 767 876 639 748 1.74e-16 84.3
Msa0037810 MtrunA17_Chr5g0420581 30.162 431 263 11 335 733 2 426 2.31e-54 195
Msa0037810 MtrunA17_Chr5g0420581 36.667 120 75 1 742 860 307 426 1.57e-18 89.4
Msa0037810 MtrunA17_Chr3g0143651 25.361 761 438 26 63 762 7 698 2.85e-51 192
Msa0037810 MtrunA17_Chr1g0157311 36.842 266 147 5 514 762 497 758 5.21e-43 168
Msa0037810 MtrunA17_Chr1g0157291 46.250 160 84 2 514 672 8 166 1.55e-41 150
Msa0037810 MtrunA17_Chr5g0420571 30.502 259 163 5 85 340 76 320 2.02e-30 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0037810 AT1G50380.2 73.501 717 163 2 52 768 62 751 0.0 1125
Msa0037810 AT1G50380.2 83.721 129 21 0 767 895 623 751 1.02e-65 235
Msa0037810 AT1G50380.1 73.876 712 159 2 57 768 1 685 0.0 1119
Msa0037810 AT1G50380.1 83.721 129 21 0 767 895 557 685 4.28e-66 235
Msa0037810 AT1G69020.2 30.533 750 454 17 66 770 40 767 1.22e-100 332
Msa0037810 AT1G69020.2 38.686 137 81 2 762 895 629 765 3.85e-21 99.8
Msa0037810 AT1G69020.1 30.013 743 435 16 66 770 40 735 5.02e-96 318
Msa0037810 AT1G69020.1 38.686 137 81 2 762 895 597 733 3.45e-21 99.8
Msa0037810 AT5G66960.1 29.167 696 425 18 103 749 78 754 2.47e-72 254
Msa0037810 AT5G66960.1 41.441 111 63 2 767 876 645 754 6.10e-16 83.2
Msa0037810 AT1G76140.2 26.210 744 442 23 67 762 78 762 2.47e-49 188
Msa0037810 AT1G76140.1 26.238 747 441 23 67 762 78 765 2.53e-49 188
Msa0037810 AT1G20380.1 25.033 751 467 25 56 762 3 701 5.27e-47 180
Msa0037810 AT1G20380.2 34.981 263 150 5 517 762 281 539 9.92e-41 159

Find 214 sgRNAs with CRISPR-Local

Find 849 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTACTAACTTGTTATT+TGG 0.087936 1_1:+66993692 None:intergenic
TCAGATCCATTACTACTTTA+TGG 0.129739 1_1:-66991407 Msa0037810:CDS
TTTAAACTTGTTTAGTATTT+GGG 0.139781 1_1:-66982585 Msa0037810:three_prime_UTR
AAGGAAAGACTTTGCATAAA+TGG 0.175876 1_1:-66990653 Msa0037810:CDS
CTTGTTACAGCTGGATTAAA+TGG 0.255776 1_1:-66982917 Msa0037810:intron
CTTGTTACAGCTGGATTAAA+TGG 0.255776 1_1:-66988994 Msa0037810:intron
TTTCTTTAGTGTGAAAATTC+AGG 0.259077 1_1:-66992047 Msa0037810:intron
ATGTCTCTGTTCTCTTGTTT+TGG 0.268778 1_1:-66982549 Msa0037810:three_prime_UTR
TCCTCCGGAGCATGTTATTT+TGG 0.279354 1_1:-66993878 Msa0037810:CDS
TTGGTTACGGTGGGAGAAAT+TGG 0.309248 1_1:-66982530 Msa0037810:three_prime_UTR
ATGCTACTAACTTGTTATTT+GGG 0.325588 1_1:+66993693 None:intergenic
AACGCAGCGGTGGTGGAAAA+AGG 0.332565 1_1:+66995273 None:intergenic
TGCATAAATGGCAGAAGTGC+TGG 0.343823 1_1:-66990641 Msa0037810:CDS
TGCATAAATGGCAGAAGTGC+TGG 0.347256 1_1:-66985183 Msa0037810:intron
AGTATATATTTCATCTCCTT+TGG 0.347787 1_1:+66993658 None:intergenic
TTATTCAAGGCTGCTGTTGC+CGG 0.348454 1_1:-66990578 Msa0037810:CDS
AAGCCTTGATGACTTGAAAC+TGG 0.362460 1_1:+66990838 None:intergenic
TTTGTTCTTACATTATCAAC+AGG 0.370728 1_1:+66989174 None:intergenic
TCCTCCTCCGGTGGCGAAGA+AGG 0.371567 1_1:-66995169 Msa0037810:CDS
CATTAACAGATGGAACCTTT+TGG 0.374692 1_1:+66993926 None:intergenic
AAACAAATATTTCTTGTTCT+CGG 0.375239 1_1:+66992727 None:intergenic
TACATTATCAACAAGGGAAT+AGG 0.376538 1_1:+66983116 None:intergenic
GTTGCATATGAGAGAGAAAA+TGG 0.377111 1_1:-66991998 Msa0037810:CDS
TGCTGTTGCCAGAGTACCTT+TGG 0.379745 1_1:-66985109 Msa0037810:CDS
TTCCTCTCACTACTTCCAAC+TGG 0.385572 1_1:-66985053 Msa0037810:CDS
GAAATATTTGTTTGTTGCAT+CGG 0.392351 1_1:-66992717 Msa0037810:CDS
GGAGAATTTCCCACCTTGTC+AGG 0.392612 1_1:+66993512 None:intergenic
TGTTGTTTAAATGTGAGCTT+GGG 0.399931 1_1:-66982661 Msa0037810:CDS
TTTAAATGTGAGCTTGGGGC+TGG 0.402664 1_1:-66982656 Msa0037810:CDS
GAAGAATCCACATAGTATAC+TGG 0.404464 1_1:+66991887 None:intergenic
TCGTATTGTTCTCAGGTTCT+CGG 0.404730 1_1:-66991542 Msa0037810:CDS
ATACGCGGAGGTGGTGAAAT+GGG 0.407509 1_1:-66990776 Msa0037810:CDS
TTTAAGACCTTCTTCAGGCT+TGG 0.409306 1_1:+66992655 None:intergenic
GAAGTAGTGAGAGGAATAGT+TGG 0.411134 1_1:+66985060 None:intergenic
TCGGACGGCGGTGGTGGTGG+TGG 0.412622 1_1:+66995238 None:intergenic
TCATCGGACGGCGGTGGTGG+TGG 0.413437 1_1:+66995235 None:intergenic
TGCTCAACCTTCTTCGCCAC+CGG 0.416607 1_1:+66995162 None:intergenic
GGGAGGCAGTGGTATGAGAA+TGG 0.419208 1_1:-66990755 Msa0037810:CDS
TGAGATAAAAGGAAGGATAA+AGG 0.422851 1_1:-66994055 Msa0037810:CDS
ATTTATGCAAAGTCTTTCCT+TGG 0.424710 1_1:+66990655 None:intergenic
CCACATATTCTTGTTACAGC+TGG 0.425203 1_1:-66982926 Msa0037810:CDS
CCACATATTCTTGTTACAGC+TGG 0.425203 1_1:-66989003 Msa0037810:CDS
ACCTTCTTCGCCACCGGAGG+AGG 0.429668 1_1:+66995168 None:intergenic
CTGACAAGAGGCTCTCCAAT+TGG 0.430484 1_1:+66993605 None:intergenic
TCAATCTCCGCTTCCTCCTC+CGG 0.431671 1_1:-66995181 Msa0037810:CDS
TACAGGACCTGATGCTCCTC+CGG 0.432220 1_1:-66993893 Msa0037810:CDS
GATAAAGGAGGAAGATATAT+CGG 0.433161 1_1:-66994040 Msa0037810:CDS
TCTTGTTCTCGGAAGCTTCA+AGG 0.434998 1_1:+66992738 None:intergenic
TTCTTATTCCCCACAGAGAA+AGG 0.435804 1_1:-66992493 Msa0037810:intron
ACATGCTCCGGAGGAGCATC+AGG 0.436439 1_1:+66993886 None:intergenic
AGGAAGAGAAAGAGTGAGGA+CGG 0.436466 1_1:+66995293 None:intergenic
ATTTGTCTCGTATTGTTCTC+AGG 0.436554 1_1:-66991549 Msa0037810:CDS
GTGTAACATCAAACCTTGAA+TGG 0.441077 1_1:-66993583 Msa0037810:CDS
TTTAAATGTGAGCTTGGTGC+TGG 0.444477 1_1:-66988777 Msa0037810:CDS
TATACGCGGAGGTGGTGAAA+TGG 0.448082 1_1:-66990777 Msa0037810:CDS
GTGGTGAAATGGGGAGGCAG+TGG 0.448275 1_1:-66990766 Msa0037810:CDS
TTCGCCACCGGAGGAGGAAG+CGG 0.452605 1_1:+66995174 None:intergenic
TATGAGACCGGATTTATTCA+AGG 0.457431 1_1:-66985133 Msa0037810:CDS
TATGAGACCGGATTTATTCA+AGG 0.457431 1_1:-66990591 Msa0037810:CDS
TGAGGATCGATAACTACTAT+TGG 0.458276 1_1:-66995116 Msa0037810:CDS
TTATGGCTACGGGTCTTATG+AGG 0.462890 1_1:-66991390 Msa0037810:intron
ATCGAGACTCAAGCTCCAAT+TGG 0.464487 1_1:-66993620 Msa0037810:CDS
GACGGCGGTGGTGGTGGTGG+TGG 0.465780 1_1:+66995241 None:intergenic
GATGTTTCCAAGCCTGAAGA+AGG 0.469052 1_1:-66992662 Msa0037810:CDS
GAAGAAGGTTGAGCACAAAA+TGG 0.470690 1_1:-66995154 Msa0037810:CDS
TCGTCATCGGACGGCGGTGG+TGG 0.474463 1_1:+66995232 None:intergenic
AAGTAGAATTCCTCCTTCCT+AGG 0.474833 1_1:+66983150 None:intergenic
AAGTAGAATTCCTCCTTCCT+AGG 0.474833 1_1:+66989216 None:intergenic
TCCTCTCACTACTTCCGAAT+GGG 0.476665 1_1:-66990510 Msa0037810:CDS
AAAGAAATTTACCTCCCATT+CGG 0.479223 1_1:+66990496 None:intergenic
GCATAAATGGCAGAAGTGCT+GGG 0.479981 1_1:-66990640 Msa0037810:CDS
CCAGCTGTAACAAGAATATG+TGG 0.480307 1_1:+66982926 None:intergenic
CCAGCTGTAACAAGAATATG+TGG 0.480307 1_1:+66989003 None:intergenic
GCATAAATGGCAGAAGTGCT+GGG 0.480811 1_1:-66985182 Msa0037810:intron
CAAAGTTCGTGGCAAAATTG+AGG 0.482652 1_1:-66982709 Msa0037810:CDS
CAAAGTTCGTGGCAAAATTG+AGG 0.482652 1_1:-66988830 Msa0037810:CDS
TGTGCTTTCTTATCTCCGTC+AGG 0.483315 1_1:-66995064 Msa0037810:CDS
CAGGCATGGCTTCATGCGTT+AGG 0.483360 1_1:-66992821 Msa0037810:CDS
CTGTTGTTTAAATGTGAGCT+TGG 0.484448 1_1:-66982662 Msa0037810:CDS
CCATTACTACTTTATGGCTA+CGG 0.485771 1_1:-66991401 Msa0037810:CDS
TTGAGAGAACGCAGCGGTGG+TGG 0.488080 1_1:+66995266 None:intergenic
AAAACTTTAAGACCTTCTTC+AGG 0.489996 1_1:+66992650 None:intergenic
TTTGTGTTACCTTTCTCTGT+GGG 0.490209 1_1:+66992484 None:intergenic
CATTACTACTTTATGGCTAC+GGG 0.491993 1_1:-66991400 Msa0037810:CDS
GTTTATCACCTTCCATCTGT+TGG 0.494857 1_1:-66991959 Msa0037810:CDS
CGGAGATAAGAAAGCACATC+GGG 0.494862 1_1:+66995069 None:intergenic
TTCTGAACCTGCAAAGTTCG+TGG 0.496672 1_1:-66982720 Msa0037810:CDS
TTCTGAACCTGCAAAGTTCG+TGG 0.496672 1_1:-66988841 Msa0037810:CDS
GAAGTAGTGAGAGGAATAGT+TGG 0.497815 1_1:+66990518 None:intergenic
GGAGGCAGTGGTATGAGAAT+GGG 0.502337 1_1:-66990754 Msa0037810:CDS
CATCATCACCAGCCCATTCA+AGG 0.504061 1_1:+66993570 None:intergenic
CCGTAGCCATAAAGTAGTAA+TGG 0.504218 1_1:+66991401 None:intergenic
TGTAGGAATGGGGTGATCCT+AGG 0.505042 1_1:-66983167 Msa0037810:intron
TGTAGGAATGGGGTGATCCT+AGG 0.505042 1_1:-66989233 Msa0037810:intron
TTAAACTTGTTTAGTATTTG+GGG 0.507265 1_1:-66982584 Msa0037810:three_prime_UTR
AAAGTTCGTGGCAAAATTGA+GGG 0.507662 1_1:-66982708 Msa0037810:CDS
AAAGTTCGTGGCAAAATTGA+GGG 0.507662 1_1:-66988829 Msa0037810:CDS
GTGAGGACGGAAACAGTTAG+AGG 0.508040 1_1:+66995306 None:intergenic
GATACCTGACATGACGGAAT+CGG 0.508137 1_1:+66995029 None:intergenic
CCACTTTCAAGACTTCTTAG+CGG 0.515524 1_1:+66991932 None:intergenic
ACAGCAGCCTTGAATAAATC+CGG 0.515832 1_1:+66985126 None:intergenic
ACAGCAGCCTTGAATAAATC+CGG 0.515832 1_1:+66990584 None:intergenic
TACACCGATTCCGTCATGTC+AGG 0.516554 1_1:-66995033 Msa0037810:intron
AAGAAGTCTTGAAAGTGGTC+AGG 0.517098 1_1:-66991927 Msa0037810:CDS
TAAGAAAACATTGGAAGGAA+AGG 0.518481 1_1:-66993986 Msa0037810:CDS
TCATCCAAAATAACATGCTC+CGG 0.519337 1_1:+66993874 None:intergenic
TGTTTATGACTATGATATGA+AGG 0.520048 1_1:-66991801 Msa0037810:CDS
ATCCCAGTTTCAAGTCATCA+AGG 0.523752 1_1:-66990841 Msa0037810:CDS
CCTTATATCTGATAACCAAA+AGG 0.525429 1_1:-66993941 Msa0037810:CDS
TGGAGTTCTTAATATGAGAC+CGG 0.525945 1_1:-66985145 Msa0037810:CDS
TGGAGTTCTTAATATGAGAC+CGG 0.525945 1_1:-66990603 Msa0037810:CDS
GTTAATGACACCATGCCTAC+AGG 0.526408 1_1:-66993910 Msa0037810:CDS
GTAATAAGGCCCTTTGCGTA+CGG 0.527741 1_1:+66994014 None:intergenic
AAAGAAATTTACCTCCCAGT+TGG 0.530838 1_1:+66985038 None:intergenic
TAATAAGGCCCTTTGCGTAC+GGG 0.530860 1_1:+66994015 None:intergenic
TTACTATTATAAGAAAACAT+TGG 0.531391 1_1:-66993995 Msa0037810:CDS
GTTGTCACAACATCCACAAA+AGG 0.531779 1_1:+66990551 None:intergenic
CTGTTGTTTAAATGTGAGCT+TGG 0.533236 1_1:-66988783 Msa0037810:CDS
GAACAAAACTCAAGGAAATG+AGG 0.533398 1_1:+66991594 None:intergenic
AACATCCACCAAAGGTACTC+TGG 0.534806 1_1:+66985101 None:intergenic
ACGTCGTCATCGGACGGCGG+TGG 0.538036 1_1:+66995229 None:intergenic
ATAAGAAAGCACATCGGGAT+CGG 0.541107 1_1:+66995074 None:intergenic
TGTAACATCAAACCTTGAAT+GGG 0.542086 1_1:-66993582 Msa0037810:CDS
CAGTGGGCACGTGCTTCAGA+TGG 0.549003 1_1:-66991485 Msa0037810:CDS
TATTGATCCAGTATACTATG+TGG 0.549092 1_1:-66991894 Msa0037810:CDS
AATAAGAACTGTAGTTGAAG+AGG 0.553201 1_1:+66992508 None:intergenic
TATGACTATGATATGAAGGC+TGG 0.555817 1_1:-66991797 Msa0037810:CDS
TATTATAAGAAAACATTGGA+AGG 0.558599 1_1:-66993991 Msa0037810:CDS
AAAGATCTTGTGAAGCTCGA+TGG 0.561830 1_1:-66991431 Msa0037810:CDS
GAGATCATTTCTTTATTAAG+CGG 0.562126 1_1:-66992583 Msa0037810:CDS
TGCGGAGGTGACGTCGTCAT+CGG 0.562589 1_1:+66995219 None:intergenic
TGTTGCCAGAGTACCTTTGG+TGG 0.562757 1_1:-66985106 Msa0037810:CDS
CATCGGAAAGTAAAACTACA+AGG 0.563926 1_1:-66992700 Msa0037810:CDS
AGCATCAGGTCCTGTAGGCA+TGG 0.564851 1_1:+66993900 None:intergenic
CAATACGAGACAAATAATAC+AGG 0.567628 1_1:+66991557 None:intergenic
ATTTGTGTTACCTTTCTCTG+TGG 0.570236 1_1:+66992483 None:intergenic
TTCCTCTCACTACTTCCGAA+TGG 0.570331 1_1:-66990511 Msa0037810:CDS
TCAACCTTCTTCGCCACCGG+AGG 0.570686 1_1:+66995165 None:intergenic
CATAAATGGCAGAAGTGCTG+GGG 0.572685 1_1:-66985181 Msa0037810:intron
CATAAATGGCAGAAGTGCTG+GGG 0.572685 1_1:-66990639 Msa0037810:CDS
TATCGGCACCCGTACGCAAA+GGG 0.574415 1_1:-66994023 Msa0037810:CDS
TGTTCTTACATTATCAACAA+GGG 0.574837 1_1:+66983110 None:intergenic
AGTTTAATGAAGGTACTATG+TGG 0.576991 1_1:-66982500 Msa0037810:three_prime_UTR
CAACAAAATACGTCACTGAA+AGG 0.580218 1_1:-66991508 Msa0037810:CDS
ATAGCTCATATACGCGGAGG+TGG 0.584461 1_1:-66990785 Msa0037810:CDS
TGCTCTAGTTTATGTAACAA+TGG 0.586588 1_1:-66993549 Msa0037810:CDS
AATACGTCACTGAAAGGCAG+TGG 0.587769 1_1:-66991502 Msa0037810:CDS
TGGTAGAATGAATGATGATA+CGG 0.587894 1_1:+66995498 None:intergenic
TTGTTCTTACATTATCAACA+AGG 0.588588 1_1:+66983109 None:intergenic
AACATCCACAAAAGGTACTC+CGG 0.590525 1_1:+66990559 None:intergenic
GATAAAAGGAAGGATAAAGG+AGG 0.590891 1_1:-66994052 Msa0037810:CDS
AGGCTTTCATTGTTAGATCG+AGG 0.595178 1_1:-66990821 Msa0037810:CDS
TGAGACTGCGACAGAGATTG+CGG 0.595221 1_1:+66995201 None:intergenic
ATTATTGATACCTGACATGA+CGG 0.598142 1_1:+66995023 None:intergenic
GGAATGGGGTGATCCTAGGA+AGG 0.598189 1_1:-66983163 Msa0037810:CDS
GGAATGGGGTGATCCTAGGA+AGG 0.598189 1_1:-66989229 Msa0037810:CDS
ATCTCCGCTTCCTCCTCCGG+TGG 0.598877 1_1:-66995178 Msa0037810:CDS
CCGCTAAGAAGTCTTGAAAG+TGG 0.599154 1_1:-66991932 Msa0037810:CDS
GAGCAATTGAACAAAACTCA+AGG 0.602027 1_1:+66991586 None:intergenic
ACATCAAACCTTGAATGGGC+TGG 0.602081 1_1:-66993578 Msa0037810:CDS
CTTATGTTACTGTAGGAATG+GGG 0.605360 1_1:-66983177 Msa0037810:intron
CTTATGTTACTGTAGGAATG+GGG 0.605360 1_1:-66989243 Msa0037810:intron
GAGGTGACGTCGTCATCGGA+CGG 0.609274 1_1:+66995223 None:intergenic
TTGTGTTACCTTTCTCTGTG+GGG 0.610149 1_1:+66992485 None:intergenic
TACGCGGAGGTGGTGAAATG+GGG 0.610390 1_1:-66990775 Msa0037810:CDS
CAGCACGAATACTACAGTAT+CGG 0.612278 1_1:-66993835 Msa0037810:CDS
TCCTCTCACTACTTCCAACT+GGG 0.619013 1_1:-66985052 Msa0037810:CDS
ATATCGGCACCCGTACGCAA+AGG 0.621018 1_1:-66994024 Msa0037810:CDS
GGAGGAGCATCAGGTCCTGT+AGG 0.622563 1_1:+66993895 None:intergenic
GCGGTTCACCAACAGATGGA+AGG 0.623497 1_1:+66991951 None:intergenic
AAGTCTTGAAAGTGGTCAGG+TGG 0.624496 1_1:-66991924 Msa0037810:CDS
GGCATGGTGTCATTAACAGA+TGG 0.625215 1_1:+66993916 None:intergenic
CTTAGCGGTTCACCAACAGA+TGG 0.627063 1_1:+66991947 None:intergenic
TTTGATGTTACACTGACAAG+AGG 0.630655 1_1:+66993593 None:intergenic
TTTCGGTATACAAGTGACAT+GGG 0.632469 1_1:+66991452 None:intergenic
TCTCACTACTTCCGAATGGG+AGG 0.634084 1_1:-66990507 Msa0037810:intron
TTGTTCTTACATTATCAACA+GGG 0.634748 1_1:+66989175 None:intergenic
GCGGAGGTGGTGAAATGGGG+AGG 0.638605 1_1:-66990772 Msa0037810:CDS
GACACTACTGTCAGCCATCG+TGG 0.641773 1_1:-66992605 Msa0037810:CDS
AGCCTTGATGACTTGAAACT+GGG 0.642429 1_1:+66990839 None:intergenic
TCCCATTCGGAAGTAGTGAG+AGG 0.647947 1_1:+66990509 None:intergenic
TAATATTCTTAGACCTGACA+AGG 0.648307 1_1:-66993525 Msa0037810:intron
TCATAGTCATAAACAGAGGG+AGG 0.649085 1_1:+66991809 None:intergenic
ATACGTCACTGAAAGGCAGT+GGG 0.650078 1_1:-66991501 Msa0037810:CDS
TGTTCTTACATTATCAACAG+GGG 0.651767 1_1:+66989176 None:intergenic
ATATCATAGTCATAAACAGA+GGG 0.651784 1_1:+66991806 None:intergenic
GGTTCAGAATACAGAACACG+TGG 0.652073 1_1:+66988855 None:intergenic
GCATATGCAGAAGACACCAA+AGG 0.654059 1_1:-66993674 Msa0037810:CDS
TCCCAGTTGGAAGTAGTGAG+AGG 0.656613 1_1:+66985051 None:intergenic
GTTGTTTAAATGTGAGCTTG+GGG 0.656860 1_1:-66982660 Msa0037810:CDS
TAAAGAAATGATCTCCACGA+TGG 0.660652 1_1:+66992591 None:intergenic
AAAAGATACTTGTCTTTACG+AGG 0.660853 1_1:-66992786 Msa0037810:CDS
TTCAGAAATGCATTATGACA+TGG 0.664136 1_1:+66995478 None:intergenic
GGTTCAGAATACAAAACACG+TGG 0.664416 1_1:+66982734 None:intergenic
TATTGTTCTCAGGTTCTCGG+AGG 0.667662 1_1:-66991539 Msa0037810:CDS
CAGCTGTAACAAGAATATGT+GGG 0.675217 1_1:+66982927 None:intergenic
CAGCTGTAACAAGAATATGT+GGG 0.675217 1_1:+66989004 None:intergenic
GAACAAGTGAGTGAGTGCAG+TGG 0.675263 1_1:-66995426 Msa0037810:five_prime_UTR
ATGGGGTGATCCTAGGAAGG+AGG 0.677198 1_1:-66983160 Msa0037810:CDS
ATGGGGTGATCCTAGGAAGG+AGG 0.677198 1_1:-66989226 Msa0037810:CDS
TCCAAAATAACATGCTCCGG+AGG 0.678194 1_1:+66993877 None:intergenic
ACGGAGATAAGAAAGCACAT+CGG 0.685417 1_1:+66995068 None:intergenic
GTTGTCACAACATCCACCAA+AGG 0.686944 1_1:+66985093 None:intergenic
GTTATAGCTCATATACGCGG+AGG 0.697147 1_1:-66990788 Msa0037810:CDS
ATAAATGGCAGAAGTGCTGG+GGG 0.697795 1_1:-66985180 Msa0037810:intron
ATAAATGGCAGAAGTGCTGG+GGG 0.697795 1_1:-66990638 Msa0037810:CDS
GATCGGAGCGAGAATCATCA+CGG 0.699674 1_1:+66995091 None:intergenic
GTGACGTCGTCATCGGACGG+CGG 0.700649 1_1:+66995226 None:intergenic
CATATCATAGTCATAAACAG+AGG 0.703744 1_1:+66991805 None:intergenic
GACTGCGACAGAGATTGCGG+AGG 0.708704 1_1:+66995204 None:intergenic
TCTCACTACTTCCAACTGGG+AGG 0.733905 1_1:-66985049 Msa0037810:intron
TATGTTATAGCTCATATACG+CGG 0.752567 1_1:-66990791 Msa0037810:CDS
GTTCAGAATACAAAACACGT+GGG 0.759019 1_1:+66982735 None:intergenic
GTTCAGAATACAGAACACGT+GGG 0.775180 1_1:+66988856 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTATATTAATTTTTT+TGG + chr1_1:66993588-66993607 None:intergenic 0.0%
!!! TTAAAATTTTATTTCTTTTC+AGG - chr1_1:66984225-66984244 Msa0037810:intron 10.0%
!!! TGTGATTTTTTTTTTAATTA+AGG + chr1_1:66984705-66984724 None:intergenic 10.0%
!!! AAAAAGGTAATTAATTATTT+TGG + chr1_1:66985693-66985712 None:intergenic 10.0%
!!! GTTTTATTAAATATTTAAAC+AGG + chr1_1:66986275-66986294 None:intergenic 10.0%
!!! TATTATTTAACTTTGTATAT+TGG + chr1_1:66987991-66988010 None:intergenic 10.0%
!!! TATTATAATTCCTATTTTTA+AGG + chr1_1:66989445-66989464 None:intergenic 10.0%
!! TTAAAAATAGGAATTATAAT+AGG - chr1_1:66989444-66989463 Msa0037810:intron 10.0%
!! ATTCTTCAAAAAAAAAAAAA+AGG - chr1_1:66989778-66989797 Msa0037810:intron 10.0%
!!! TGTGTTTTATTTTATATAAA+GGG + chr1_1:66993441-66993460 None:intergenic 10.0%
!!! TTGTGTTTTATTTTATATAA+AGG + chr1_1:66993442-66993461 None:intergenic 10.0%
!!! TTTTTTTTAAGAAATTCTAT+AGG - chr1_1:66993841-66993860 Msa0037810:CDS 10.0%
!! CGTATTTAATAAAAAAGAAA+AGG + chr1_1:66982984-66983003 None:intergenic 15.0%
!!! ATACAAAAACAATTTTACAT+TGG + chr1_1:66983326-66983345 None:intergenic 15.0%
!!! ATTCATATTTTTGAATTTCT+AGG - chr1_1:66983837-66983856 Msa0037810:intron 15.0%
!!! GTTTTCTTATAATAGTAATA+AGG + chr1_1:66983948-66983967 None:intergenic 15.0%
!! TTACTATTATAAGAAAACAT+TGG - chr1_1:66983950-66983969 Msa0037810:intron 15.0%
!!! TTTTCAATTTCAATTTGTTT+AGG - chr1_1:66984505-66984524 Msa0037810:intron 15.0%
!! TAGATATTTGAATATATACA+AGG - chr1_1:66984923-66984942 Msa0037810:intron 15.0%
!!! AATAATTAATTACCTTTTTG+AGG - chr1_1:66985694-66985713 Msa0037810:intron 15.0%
!!! ATCCATATTTATATTTCTTT+TGG - chr1_1:66986801-66986820 Msa0037810:intron 15.0%
!!! TTTAAATCATTTTCATATGT+TGG + chr1_1:66987496-66987515 None:intergenic 15.0%
!! TGTATATTGGTAAAAAAATA+TGG + chr1_1:66987978-66987997 None:intergenic 15.0%
!! TAAAGATAAAAAATATGCAT+TGG - chr1_1:66988107-66988126 Msa0037810:intron 15.0%
!! ATTCAGTTTATTTATCAATT+TGG + chr1_1:66988297-66988316 None:intergenic 15.0%
!!! AAATCATGTTGAAATTTTTT+CGG + chr1_1:66988391-66988410 None:intergenic 15.0%
!!! AGTTTAATAAATTTTATTCC+CGG + chr1_1:66989563-66989582 None:intergenic 15.0%
!!! ATCCATATTTATATTACTTT+TGG - chr1_1:66990279-66990298 Msa0037810:intron 15.0%
!!! ATCCATATTTATATTACTTT+TGG - chr1_1:66990279-66990298 Msa0037810:intron 15.0%
!!! ATCCATATTTATATTACTTT+TGG - chr1_1:66990279-66990298 Msa0037810:intron 15.0%
!!! TTTTATATAAAGGGTAAATT+TGG + chr1_1:66993432-66993451 None:intergenic 15.0%
!!! TAATTTTTTTGGAAACAAAT+TGG + chr1_1:66993577-66993596 None:intergenic 15.0%
!! TAAAACATTCTATTATTTAG+TGG - chr1_1:66995102-66995121 Msa0037810:CDS 15.0%
!!! TTTTAAACTTGTTTAGTATT+TGG - chr1_1:66995359-66995378 Msa0037810:CDS 15.0%
!!! TTTAAACTTGTTTAGTATTT+GGG - chr1_1:66995360-66995379 Msa0037810:CDS 15.0%
!!! AATGCATTTCTGAATATTTT+AGG - chr1_1:66982476-66982495 Msa0037810:three_prime_UTR 20.0%
!!! ATAAGAAGTCTTTTGAAATT+AGG - chr1_1:66983785-66983804 Msa0037810:intron 20.0%
!!! AAGCTTATCTTCAATTTTTT+TGG + chr1_1:66983865-66983884 None:intergenic 20.0%
!! TATTATAAGAAAACATTGGA+AGG - chr1_1:66983954-66983973 Msa0037810:intron 20.0%
!! TTAGATCATATCATTATCAT+GGG - chr1_1:66984144-66984163 Msa0037810:intron 20.0%
!! TATCTGAACAATTAAATACT+GGG + chr1_1:66984465-66984484 None:intergenic 20.0%
!! ATATCTGAACAATTAAATAC+TGG + chr1_1:66984466-66984485 None:intergenic 20.0%
!!! AATTAGGTTCTAATTCAATT+CGG + chr1_1:66984542-66984561 None:intergenic 20.0%
!!! TATCTAATTGAGCTTTTTTA+AGG - chr1_1:66984669-66984688 Msa0037810:intron 20.0%
!!! AAGTTTTATAGTTATTCAGT+AGG - chr1_1:66984724-66984743 Msa0037810:intron 20.0%
!! AAACAAATATTTCTTGTTCT+CGG + chr1_1:66985221-66985240 None:intergenic 20.0%
!!! ATTATTTTGGCTTTTGAAAA+TGG + chr1_1:66985680-66985699 None:intergenic 20.0%
!!! AGAAAATTCAATGTAAGTTT+TGG + chr1_1:66985883-66985902 None:intergenic 20.0%
!!! AGGTGATAAACAATTATTTT+TGG + chr1_1:66985977-66985996 None:intergenic 20.0%
!!! CTCTAGAATTTAATTTCATA+AGG + chr1_1:66986251-66986270 None:intergenic 20.0%
!! AGCCAAAAGAAATATAAATA+TGG + chr1_1:66986806-66986825 None:intergenic 20.0%
!! TCAGAAATCTATTAATGAAA+CGG + chr1_1:66986837-66986856 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG + chr1_1:66987049-66987068 None:intergenic 20.0%
!!! CTCATTATGTCTTTTAAAAT+TGG - chr1_1:66987548-66987567 Msa0037810:intron 20.0%
!!! ATTTTATAACTTGTAAGAGA+AGG - chr1_1:66987759-66987778 Msa0037810:intron 20.0%
!!! ATCTTTTACAAAAAAGACAA+CGG - chr1_1:66987814-66987833 Msa0037810:intron 20.0%
!! AAATATGGTCAAAATATGTT+AGG + chr1_1:66987963-66987982 None:intergenic 20.0%
!! AATATCATATAAGATGTTGT+TGG - chr1_1:66988015-66988034 Msa0037810:intron 20.0%
!!! AATCATGTTGAAATTTTTTC+GGG + chr1_1:66988390-66988409 None:intergenic 20.0%
!!! AATTTGTTTGTCTTTTAAAC+TGG - chr1_1:66988513-66988532 Msa0037810:intron 20.0%
!!! TAATTTTTATTCTCTCTGTA+AGG - chr1_1:66988845-66988864 Msa0037810:CDS 20.0%
!!! TTTTAAACTTGTTTAGTGTT+TGG - chr1_1:66989238-66989257 Msa0037810:intron 20.0%
!!! TTTAAACTTGTTTAGTGTTT+GGG - chr1_1:66989239-66989258 Msa0037810:intron 20.0%
!! AGTTTATCAAATTTATTGCA+AGG - chr1_1:66989329-66989348 Msa0037810:intron 20.0%
!! GTATTTAGAAAAAAGATGTT+TGG - chr1_1:66989395-66989414 Msa0037810:intron 20.0%
!! GTTAACATTATAATATTCCA+AGG - chr1_1:66989417-66989436 Msa0037810:intron 20.0%
!!! GTTTAATAAATTTTATTCCC+GGG + chr1_1:66989562-66989581 None:intergenic 20.0%
!! ATTAAACTTGTAACAAACAT+AGG - chr1_1:66989575-66989594 Msa0037810:intron 20.0%
!! AGCCAAAAGTAATATAAATA+TGG + chr1_1:66990284-66990303 None:intergenic 20.0%
!! GAAAATCAGAAATCTATTAA+TGG + chr1_1:66990320-66990339 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG + chr1_1:66987049-66987068 None:intergenic 20.0%
!! AGCCAAAAGTAATATAAATA+TGG + chr1_1:66990284-66990303 None:intergenic 20.0%
!! GAAAATCAGAAATCTATTAA+TGG + chr1_1:66990320-66990339 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG + chr1_1:66987049-66987068 None:intergenic 20.0%
!! AGCCAAAAGTAATATAAATA+TGG + chr1_1:66990284-66990303 None:intergenic 20.0%
!! GAAAATCAGAAATCTATTAA+TGG + chr1_1:66990320-66990339 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG + chr1_1:66987049-66987068 None:intergenic 20.0%
!!! TTTGAATCATTTTCATATGT+TGG + chr1_1:66992954-66992973 None:intergenic 20.0%
!!! ATTTTATAACTTGTTAGAGA+AGG - chr1_1:66993219-66993238 Msa0037810:intron 20.0%
!! AAAAAAATAAGGAAGGTTAA+AGG + chr1_1:66993286-66993305 None:intergenic 20.0%
!! AAAATCAATTAAAACTAGAG+AGG + chr1_1:66993330-66993349 None:intergenic 20.0%
!!! GTAATGTTTTAACATTCTAT+TGG - chr1_1:66993807-66993826 Msa0037810:intron 20.0%
!!! TTTTTAAGAAATTCTATAGG+AGG - chr1_1:66993844-66993863 Msa0037810:CDS 20.0%
!! ACATATATATAAGTTTGATC+TGG + chr1_1:66993880-66993899 None:intergenic 20.0%
!! TTACATTTCCGAAAATTATT+CGG + chr1_1:66994008-66994027 None:intergenic 20.0%
!!! TGAGTTTTCCAAAAAAAAAT+CGG - chr1_1:66994031-66994050 Msa0037810:CDS 20.0%
!!! AAACTTTTCCGATTTTTTTT+TGG + chr1_1:66994042-66994061 None:intergenic 20.0%
!! AAAAATTAGAAATACATACC+TGG - chr1_1:66994073-66994092 Msa0037810:CDS 20.0%
!!! TGGAATTTTAAAAGATTTGT+AGG - chr1_1:66994197-66994216 Msa0037810:intron 20.0%
!!! GGAATTTTAAAAGATTTGTA+GGG - chr1_1:66994198-66994217 Msa0037810:intron 20.0%
!!! GAATTTTAAAAGATTTGTAG+GGG - chr1_1:66994199-66994218 Msa0037810:intron 20.0%
!! AAAAAAAAAAAAACATGCCA+GGG + chr1_1:66994277-66994296 None:intergenic 20.0%
!! AAAAAAAAAAAAAACATGCC+AGG + chr1_1:66994278-66994297 None:intergenic 20.0%
!! ACTCAGTTTATTTATCAATT+TGG + chr1_1:66994346-66994365 None:intergenic 20.0%
!! AAATCATGTTGAAATTGTTT+CGG + chr1_1:66994442-66994461 None:intergenic 20.0%
!!! AATTTGTTTGTCTTTTAAAC+TGG - chr1_1:66988513-66988532 Msa0037810:intron 20.0%
!! ACAAGTTTAAAAACAAACAA+CGG + chr1_1:66995351-66995370 None:intergenic 20.0%
!!! TTAAACTTGTTTAGTATTTG+GGG - chr1_1:66995361-66995380 Msa0037810:CDS 20.0%
!!! TGGAAATTTTAGTTTAATGA+AGG - chr1_1:66995435-66995454 Msa0037810:five_prime_UTR 20.0%
!! TTCATTCAGAAGATATTTTG+AGG + chr1_1:66983059-66983078 None:intergenic 25.0%
! TAGCTTATAAAAACAGCTTA+AGG + chr1_1:66983352-66983371 None:intergenic 25.0%
!!! GCTGTTTTTATAAGCTATAT+TGG - chr1_1:66983355-66983374 Msa0037810:intron 25.0%
! ATATGTTTGAACTCAATGTA+TGG - chr1_1:66983662-66983681 Msa0037810:intron 25.0%
!!! TATTTTGGATGAGAATATCA+AGG - chr1_1:66984082-66984101 Msa0037810:intron 25.0%
! GTTAGATCATATCATTATCA+TGG - chr1_1:66984143-66984162 Msa0037810:intron 25.0%
!!! ATGCTACTAACTTGTTATTT+GGG + chr1_1:66984255-66984274 None:intergenic 25.0%
!!! TATGCTACTAACTTGTTATT+TGG + chr1_1:66984256-66984275 None:intergenic 25.0%
! AGTATATATTTCATCTCCTT+TGG + chr1_1:66984290-66984309 None:intergenic 25.0%
!!! TCTAATTTTCAGGCTAAATT+AGG + chr1_1:66984558-66984577 None:intergenic 25.0%
!! GAAATATTTGTTTGTTGCAT+CGG - chr1_1:66985228-66985247 Msa0037810:intron 25.0%
! GAGATCATTTCTTTATTAAG+CGG - chr1_1:66985362-66985381 Msa0037810:intron 25.0%
! CAAGATTATGCTCAAAATAA+AGG + chr1_1:66985511-66985530 None:intergenic 25.0%
!! GAAACTTTTAATCCTCAAAA+AGG + chr1_1:66985709-66985728 None:intergenic 25.0%
! ATTCATGTGTTAACACTTTA+CGG + chr1_1:66985814-66985833 None:intergenic 25.0%
! TTTCTTTAGTGTGAAAATTC+AGG - chr1_1:66985898-66985917 Msa0037810:intron 25.0%
! ATATCATAGTCATAAACAGA+GGG + chr1_1:66986142-66986161 None:intergenic 25.0%
! TGTTTATGACTATGATATGA+AGG - chr1_1:66986144-66986163 Msa0037810:intron 25.0%
! AATAAAACTATAAGGACTTG+TGG - chr1_1:66986287-66986306 Msa0037810:intron 25.0%
! CAAAGCATAGAATTCAAAAT+TGG + chr1_1:66986623-66986642 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG - chr1_1:66986621-66986640 Msa0037810:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG - chr1_1:66986632-66986651 Msa0037810:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG + chr1_1:66986666-66986685 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG - chr1_1:66986709-66986728 Msa0037810:intron 25.0%
! TTTGCTTGTCTAACAATTAA+AGG + chr1_1:66986873-66986892 None:intergenic 25.0%
! TGAAAAAAAATTCTGTTCCA+AGG - chr1_1:66987273-66987292 Msa0037810:intron 25.0%
!! ATCATTTTCATATGTTGGTA+TGG + chr1_1:66987491-66987510 None:intergenic 25.0%
! AATACAAATTCATGCTGTTA+GGG + chr1_1:66987702-66987721 None:intergenic 25.0%
!! AAGATATTTTCCTTTCTTAC+AGG + chr1_1:66987799-66987818 None:intergenic 25.0%
! AAGATCAATTAAAACAAGAG+AGG + chr1_1:66987879-66987898 None:intergenic 25.0%
!! ATACTTTTAATGCATCAAGT+TGG + chr1_1:66988438-66988457 None:intergenic 25.0%
! TTTAAACTGGTATTAAGAAG+AGG - chr1_1:66988526-66988545 Msa0037810:intron 25.0%
! TAAAACTCACATACTTAACT+CGG + chr1_1:66988586-66988605 None:intergenic 25.0%
! TTATTTCCTTATGTTACTGT+AGG - chr1_1:66988695-66988714 Msa0037810:intron 25.0%
! TTGTTCTTACATTATCAACA+GGG + chr1_1:66988773-66988792 None:intergenic 25.0%
! TTTGTTCTTACATTATCAAC+AGG + chr1_1:66988774-66988793 None:intergenic 25.0%
! GAGAGAATAAAAATTATGCT+CGG + chr1_1:66988841-66988860 None:intergenic 25.0%
! ACAAGTTTAAAAACAAACAG+CGG + chr1_1:66989230-66989249 None:intergenic 25.0%
!!! TTGTTCTTTTGTTTTGGTTA+CGG - chr1_1:66989269-66989288 Msa0037810:intron 25.0%
! ATTCCTTAGAACATAAAGAT+GGG - chr1_1:66989358-66989377 Msa0037810:intron 25.0%
!!! CATCTTTTTTCTAAATACCT+TGG + chr1_1:66989393-66989412 None:intergenic 25.0%
!! TAATTTTATTCCCATCTTCA+TGG - chr1_1:66989477-66989496 Msa0037810:intron 25.0%
!! AATTTTATTCCCATCTTCAT+GGG - chr1_1:66989478-66989497 Msa0037810:intron 25.0%
!! TTTATTTCCACCATTTTCTT+TGG - chr1_1:66989504-66989523 Msa0037810:intron 25.0%
!! TTATTTCCACCATTTTCTTT+GGG - chr1_1:66989505-66989524 Msa0037810:intron 25.0%
!! AAAAGTTTTCCCAAAGAAAA+TGG + chr1_1:66989517-66989536 None:intergenic 25.0%
! AGTTATATTTGTAGATTCCT+GGG + chr1_1:66989625-66989644 None:intergenic 25.0%
! AAGTTATATTTGTAGATTCC+TGG + chr1_1:66989626-66989645 None:intergenic 25.0%
! TAGTACCTTCATTAAACTAA+GGG + chr1_1:66989661-66989680 None:intergenic 25.0%
! ATAGTACCTTCATTAAACTA+AGG + chr1_1:66989662-66989681 None:intergenic 25.0%
! ATTTATTAGTGAGCAAGTTA+TGG - chr1_1:66989729-66989748 Msa0037810:intron 25.0%
! CAAAGCATAGAATTCAAAAT+TGG + chr1_1:66986623-66986642 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG - chr1_1:66986621-66986640 Msa0037810:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG - chr1_1:66986632-66986651 Msa0037810:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG + chr1_1:66986666-66986685 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG - chr1_1:66986709-66986728 Msa0037810:intron 25.0%
! TCAGAAATCTATTAATGGAA+CGG + chr1_1:66990315-66990334 None:intergenic 25.0%
! TTGAAAAAAATTCTGTTCCA+AGG - chr1_1:66990749-66990768 Msa0037810:CDS 25.0%
! ATTTATGCAAAATCTTTCCT+TGG + chr1_1:66990769-66990788 None:intergenic 25.0%
!! AAGGAAAGATTTTGCATAAA+TGG - chr1_1:66990768-66990787 Msa0037810:CDS 25.0%
! CAAAGCATAGAATTCAAAAT+TGG + chr1_1:66986623-66986642 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG - chr1_1:66986621-66986640 Msa0037810:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG - chr1_1:66986632-66986651 Msa0037810:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG + chr1_1:66986666-66986685 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG - chr1_1:66986709-66986728 Msa0037810:intron 25.0%
! TCAGAAATCTATTAATGGAA+CGG + chr1_1:66990315-66990334 None:intergenic 25.0%
! TTGAAAAAAATTCTGTTCCA+AGG - chr1_1:66990749-66990768 Msa0037810:CDS 25.0%
! ATTTATGCAAAATCTTTCCT+TGG + chr1_1:66990769-66990788 None:intergenic 25.0%
!! AAGGAAAGATTTTGCATAAA+TGG - chr1_1:66990768-66990787 Msa0037810:CDS 25.0%
! CAAAGCATAGAATTCAAAAT+TGG + chr1_1:66986623-66986642 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG - chr1_1:66986621-66986640 Msa0037810:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG - chr1_1:66986632-66986651 Msa0037810:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG + chr1_1:66986666-66986685 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG - chr1_1:66986709-66986728 Msa0037810:intron 25.0%
! TCAGAAATCTATTAATGGAA+CGG + chr1_1:66990315-66990334 None:intergenic 25.0%
! TTGAAAAAAATTCTGTTCCA+AGG - chr1_1:66990749-66990768 Msa0037810:CDS 25.0%
! ATTTATGCAAAATCTTTCCT+TGG + chr1_1:66990769-66990788 None:intergenic 25.0%
!! AAGGAAAGATTTTGCATAAA+TGG - chr1_1:66990768-66990787 Msa0037810:CDS 25.0%
!! ATCATTTTCATATGTTGGTA+TGG + chr1_1:66987491-66987510 None:intergenic 25.0%
! TGAGAGAAAAAAAATAAGGA+AGG + chr1_1:66993293-66993312 None:intergenic 25.0%
! GTCATGAGAGAAAAAAAATA+AGG + chr1_1:66988177-66988196 None:intergenic 25.0%
!!! ATTTTTTTCAGAAAATGTGG+GGG + chr1_1:66993477-66993496 None:intergenic 25.0%
!!! CATTTTTTTCAGAAAATGTG+GGG + chr1_1:66993478-66993497 None:intergenic 25.0%
!!! CCATTTTTTTCAGAAAATGT+GGG + chr1_1:66993479-66993498 None:intergenic 25.0%
!!! ACCATTTTTTTCAGAAAATG+TGG + chr1_1:66993480-66993499 None:intergenic 25.0%
! AAGAATAAAGCATGAGATTA+AGG + chr1_1:66993737-66993756 None:intergenic 25.0%
!!! ATGTTTTAACATTCTATTGG+AGG - chr1_1:66993810-66993829 Msa0037810:intron 25.0%
!! AAATTCTATAGGAGGATTTT+AGG - chr1_1:66993852-66993871 Msa0037810:CDS 25.0%
! AAATCACAATAAATCCTTTC+CGG + chr1_1:66993949-66993968 None:intergenic 25.0%
! AAAGGATTTATTGTGATTTC+CGG - chr1_1:66993950-66993969 Msa0037810:CDS 25.0%
!!! AACATTTCTAGTATACATAC+CGG + chr1_1:66993972-66993991 None:intergenic 25.0%
!!! AAATCGGAAAAGTTTTATAG+TGG - chr1_1:66994047-66994066 Msa0037810:CDS 25.0%
! ATAAAAGGTTAAATAGCACA+AGG - chr1_1:66994166-66994185 Msa0037810:intron 25.0%
! TAAAAGGTTAAATAGCACAA+GGG - chr1_1:66994167-66994186 Msa0037810:intron 25.0%
!!! TTTTTTTTGTAAAACATCCC+TGG - chr1_1:66994291-66994310 Msa0037810:intron 25.0%
!! ATATAATTTTGTGCACATAC+TGG - chr1_1:66994381-66994400 Msa0037810:intron 25.0%
! AATCATGTTGAAATTGTTTC+GGG + chr1_1:66994441-66994460 None:intergenic 25.0%
!! ATACTTTTAATGCATCAAGT+TGG + chr1_1:66988438-66988457 None:intergenic 25.0%
! TTTAAACTGGTATTAAGAAG+AGG - chr1_1:66988526-66988545 Msa0037810:intron 25.0%
! TAAAACTCACATACTTATCT+CGG + chr1_1:66994637-66994656 None:intergenic 25.0%
!!! GATTTCTTTTGCTTTTCTTT+TGG - chr1_1:66994729-66994748 Msa0037810:intron 25.0%
! TGTTCTTACATTATCAACAA+GGG + chr1_1:66994838-66994857 None:intergenic 25.0%
! TTGTTCTTACATTATCAACA+AGG + chr1_1:66988773-66988792 None:intergenic 25.0%
! TCAGACAAAAAATAAATAGG+CGG + chr1_1:66994898-66994917 None:intergenic 25.0%
! TGCTCAGACAAAAAATAAAT+AGG + chr1_1:66994901-66994920 None:intergenic 25.0%
!! AATTTTTATTCTCTCCTGTA+AGG - chr1_1:66994922-66994941 Msa0037810:intron 25.0%
! TTTAGTGGTCACTAATAATT+TGG - chr1_1:66995117-66995136 Msa0037810:CDS 25.0%
TGGTAGAATGAATGATGATA+CGG + chr1_1:66982450-66982469 None:intergenic 30.0%
TTCAGAAATGCATTATGACA+TGG + chr1_1:66982470-66982489 None:intergenic 30.0%
ATTATTGATACCTGACATGA+CGG + chr1_1:66982925-66982944 None:intergenic 30.0%
! CATATGTCATAAGCTGATTT+CGG + chr1_1:66983133-66983152 None:intergenic 30.0%
TAGCTTATGAAAACAGCTTA+TGG + chr1_1:66983086-66983105 None:intergenic 30.0%
AAGCTATATTGGAGAACTTA+TGG - chr1_1:66983366-66983385 Msa0037810:intron 30.0%
ATTAGGTTATTGAGACTGTT+TGG + chr1_1:66983482-66983501 None:intergenic 30.0%
TGAAAACAGCTTATGACATA+AGG + chr1_1:66983514-66983533 None:intergenic 30.0%
TCAAAAAAGTCAATCCAAAG+AGG - chr1_1:66983581-66983600 Msa0037810:intron 30.0%
AATGTCATATTGAACCTCTT+TGG + chr1_1:66983598-66983617 None:intergenic 30.0%
! AAGCTTTTTGCTGAGATAAA+AGG - chr1_1:66983879-66983898 Msa0037810:intron 30.0%
! TTTTTGCTGAGATAAAAGGA+AGG - chr1_1:66983883-66983902 Msa0037810:intron 30.0%
TGAGATAAAAGGAAGGATAA+AGG - chr1_1:66983890-66983909 Msa0037810:intron 30.0%
GATAAAGGAGGAAGATATAT+CGG - chr1_1:66983905-66983924 Msa0037810:intron 30.0%
TAAGAAAACATTGGAAGGAA+AGG - chr1_1:66983959-66983978 Msa0037810:intron 30.0%
!! CCTTTTGGTTATCAGATATA+AGG + chr1_1:66984007-66984026 None:intergenic 30.0%
CCTTATATCTGATAACCAAA+AGG - chr1_1:66984004-66984023 Msa0037810:intron 30.0%
TGTAACATCAAACCTTGAAT+GGG - chr1_1:66984363-66984382 Msa0037810:intron 30.0%
! TGCTCTAGTTTATGTAACAA+TGG - chr1_1:66984396-66984415 Msa0037810:intron 30.0%
TAATATTCTTAGACCTGACA+AGG - chr1_1:66984420-66984439 Msa0037810:intron 30.0%
! CAATTAAATACTGGGTTGAA+AGG + chr1_1:66984457-66984476 None:intergenic 30.0%
TTCAGATATAATCAGCACTT+GGG - chr1_1:66984477-66984496 Msa0037810:intron 30.0%
! CACAATCTCATCTAATTTTC+AGG + chr1_1:66984568-66984587 None:intergenic 30.0%
CTGAAAATTAGATGAGATTG+TGG - chr1_1:66984566-66984585 Msa0037810:intron 30.0%
! TTTTCTGCTTAATTCAAAGC+CGG - chr1_1:66984627-66984646 Msa0037810:intron 30.0%
!!! TTTCTGAAGCTGCTATTTTT+TGG + chr1_1:66984808-66984827 None:intergenic 30.0%
!! ATGATAATGGTTTAGAAGTG+AGG + chr1_1:66985002-66985021 None:intergenic 30.0%
CTAAAACTTATATACACGTG+AGG + chr1_1:66985028-66985047 None:intergenic 30.0%
! GTTTAGTATTTTGCTGCATA+TGG - chr1_1:66985051-66985070 Msa0037810:CDS 30.0%
AAAAGATACTTGTCTTTACG+AGG - chr1_1:66985159-66985178 Msa0037810:CDS 30.0%
!! AAAACTTTAAGACCTTCTTC+AGG + chr1_1:66985298-66985317 None:intergenic 30.0%
AATAAGAACTGTAGTTGAAG+AGG + chr1_1:66985440-66985459 None:intergenic 30.0%
! TGCTTTCCAAAATGTTGTTT+AGG - chr1_1:66985617-66985636 Msa0037810:intron 30.0%
! AGTTCTCCTAAACAACATTT+TGG + chr1_1:66985626-66985645 None:intergenic 30.0%
ACACTTTACGGAAATAATCA+AGG + chr1_1:66985802-66985821 None:intergenic 30.0%
TATTGATCCAGTATACTATG+TGG - chr1_1:66986051-66986070 Msa0037810:intron 30.0%
CATATCATAGTCATAAACAG+AGG + chr1_1:66986143-66986162 None:intergenic 30.0%
!!! AGTTTTGAAGAAGATTGACT+CGG - chr1_1:66986177-66986196 Msa0037810:intron 30.0%
! AAGCTGTTCAATTTTACATC+AGG - chr1_1:66986225-66986244 Msa0037810:intron 30.0%
CAATACGAGACAAATAATAC+AGG + chr1_1:66986391-66986410 None:intergenic 30.0%
TCAGATCCATTACTACTTTA+TGG - chr1_1:66986538-66986557 Msa0037810:intron 30.0%
! TTCTTGTCTTATTGGAACAA+AGG - chr1_1:66986717-66986736 Msa0037810:intron 30.0%
ATATGGATGTTCATGAACAA+AGG + chr1_1:66986789-66986808 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG - chr1_1:66986916-66986935 Msa0037810:intron 30.0%
TATGTTATAGCTCATATACG+CGG - chr1_1:66987154-66987173 Msa0037810:intron 30.0%
ATTTATGCAAAGTCTTTCCT+TGG + chr1_1:66987293-66987312 None:intergenic 30.0%
AAGGAAAGACTTTGCATAAA+TGG - chr1_1:66987292-66987311 Msa0037810:intron 30.0%
AAAGAAATTTACCTCCCATT+CGG + chr1_1:66987452-66987471 None:intergenic 30.0%
TTTCATATGTTGGTATGGAA+TGG + chr1_1:66987486-66987505 None:intergenic 30.0%
TAAAGTCAAACAGAAACATC+TGG + chr1_1:66987527-66987546 None:intergenic 30.0%
! TGTCTTTTATGATTGCCTTT+AGG - chr1_1:66987598-66987617 Msa0037810:intron 30.0%
ATACAAATTCATGCTGTTAG+GGG + chr1_1:66987701-66987720 None:intergenic 30.0%
CAATACAAATTCATGCTGTT+AGG + chr1_1:66987703-66987722 None:intergenic 30.0%
GTAAGAGAAGGAAAATATGT+TGG - chr1_1:66987771-66987790 Msa0037810:intron 30.0%
!! AGTGCTTCTGTTTAATTTTC+TGG - chr1_1:66987838-66987857 Msa0037810:intron 30.0%
ATCAATTAAAACAAGAGAGG+AGG + chr1_1:66987876-66987895 None:intergenic 30.0%
TCAACTAAGTCATCTCATAT+GGG + chr1_1:66987924-66987943 None:intergenic 30.0%
!! TCAACTGTGTCACTTAATAT+GGG - chr1_1:66988144-66988163 Msa0037810:intron 30.0%
!!! TTTTTTTTCTCTCATGACAC+TGG - chr1_1:66988179-66988198 Msa0037810:intron 30.0%
TAGCTGTGATTTCTTCTAAA+TGG + chr1_1:66988235-66988254 None:intergenic 30.0%
!!! TTTTTTCGGGAAATGAGAAA+TGG + chr1_1:66988377-66988396 None:intergenic 30.0%
CATTTGCTTGTTTACTTTCA+TGG + chr1_1:66988466-66988485 None:intergenic 30.0%
AAGTAAACAAGCAAATGTGT+CGG - chr1_1:66988469-66988488 Msa0037810:intron 30.0%
! ATGAAATTCAAGAGCTTTGA+TGG + chr1_1:66988620-66988639 None:intergenic 30.0%
TGTTCTTACATTATCAACAG+GGG + chr1_1:66988772-66988791 None:intergenic 30.0%
AGAACAAATACTGCACTTAA+TGG - chr1_1:66988786-66988805 Msa0037810:CDS 30.0%
TTTATTCTCTCTGTAAGGAA+TGG - chr1_1:66988850-66988869 Msa0037810:CDS 30.0%
!! ACGACTTTGTTCTTTTGTTT+TGG - chr1_1:66989263-66989282 Msa0037810:intron 30.0%
CATTCCTTAGAACATAAAGA+TGG - chr1_1:66989357-66989376 Msa0037810:intron 30.0%
ATTCCCATCTTTATGTTCTA+AGG + chr1_1:66989364-66989383 None:intergenic 30.0%
! AAGATGGGAATTTTATTCCA+AGG - chr1_1:66989373-66989392 Msa0037810:intron 30.0%
TTCCAAGGAACCTTAAAAAT+AGG - chr1_1:66989432-66989451 Msa0037810:intron 30.0%
!!! TTCCTATTTTTAAGGTTCCT+TGG + chr1_1:66989437-66989456 None:intergenic 30.0%
AATAAAGTTCCCATGAAGAT+GGG + chr1_1:66989490-66989509 None:intergenic 30.0%
AAATAAAGTTCCCATGAAGA+TGG + chr1_1:66989491-66989510 None:intergenic 30.0%
! GTTTTTATGATTTTATGCCC+AGG - chr1_1:66989605-66989624 Msa0037810:intron 30.0%
!! AGTTTAATGAAGGTACTATG+TGG - chr1_1:66989663-66989682 Msa0037810:intron 30.0%
! AGAAGAGTAACATTTTCAGA+TGG - chr1_1:66989812-66989831 Msa0037810:intron 30.0%
ATTCATTTAAGTGCTTCAGA+TGG - chr1_1:66989940-66989959 Msa0037810:intron 30.0%
TCAGATCCATTACTACTTTA+TGG - chr1_1:66986538-66986557 Msa0037810:intron 30.0%
CATTACTACTTTATGGCTAT+GGG - chr1_1:66990025-66990044 Msa0037810:intron 30.0%
! TTCTTGTCTTATTGGAACAA+AGG - chr1_1:66986717-66986736 Msa0037810:intron 30.0%
ATATGGATGTTCATGAACAA+AGG + chr1_1:66986789-66986808 None:intergenic 30.0%
TTTGCCTGTCTAACAATTAA+AGG + chr1_1:66990350-66990369 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG - chr1_1:66986916-66986935 Msa0037810:intron 30.0%
TATGTTATAGCTCATATACG+TGG - chr1_1:66987154-66987173 Msa0037810:intron 30.0%
ATTCATTTAAGTGCTTCAGA+TGG - chr1_1:66989940-66989959 Msa0037810:intron 30.0%
TCAGATCCATTACTACTTTA+TGG - chr1_1:66986538-66986557 Msa0037810:intron 30.0%
CATTACTACTTTATGGCTAT+GGG - chr1_1:66990025-66990044 Msa0037810:intron 30.0%
! TTCTTGTCTTATTGGAACAA+AGG - chr1_1:66986717-66986736 Msa0037810:intron 30.0%
ATATGGATGTTCATGAACAA+AGG + chr1_1:66986789-66986808 None:intergenic 30.0%
TTTGCCTGTCTAACAATTAA+AGG + chr1_1:66990350-66990369 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG - chr1_1:66986916-66986935 Msa0037810:intron 30.0%
TATGTTATAGCTCATATACG+TGG - chr1_1:66987154-66987173 Msa0037810:intron 30.0%
ATTCATTTAAGTGCTTCAGA+TGG - chr1_1:66989940-66989959 Msa0037810:intron 30.0%
TCAGATCCATTACTACTTTA+TGG - chr1_1:66986538-66986557 Msa0037810:intron 30.0%
CATTACTACTTTATGGCTAT+GGG - chr1_1:66990025-66990044 Msa0037810:intron 30.0%
! TTCTTGTCTTATTGGAACAA+AGG - chr1_1:66986717-66986736 Msa0037810:intron 30.0%
ATATGGATGTTCATGAACAA+AGG + chr1_1:66986789-66986808 None:intergenic 30.0%
TTTGCCTGTCTAACAATTAA+AGG + chr1_1:66990350-66990369 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG - chr1_1:66986916-66986935 Msa0037810:intron 30.0%
TATGTTATAGCTCATATACG+TGG - chr1_1:66987154-66987173 Msa0037810:intron 30.0%
!! TCTCATGGTGTCTTTTAAAA+TGG - chr1_1:66993010-66993029 Msa0037810:intron 30.0%
!!! CTCATGGTGTCTTTTAAAAT+GGG - chr1_1:66993011-66993030 Msa0037810:intron 30.0%
AATACAAATGCATGCTGTTA+GGG + chr1_1:66993162-66993181 None:intergenic 30.0%
AAGGTCAATTAAAACTAGAG+AGG + chr1_1:66993267-66993286 None:intergenic 30.0%
!!! TTTTTTTTCTCTCATGACAC+TGG - chr1_1:66988179-66988198 Msa0037810:intron 30.0%
CAATTAAAACTAGAGAGGAT+GGG + chr1_1:66993325-66993344 None:intergenic 30.0%
TCAATTAAAACTAGAGAGGA+TGG + chr1_1:66993326-66993345 None:intergenic 30.0%
GAAGTTTATGTACAATGTTG+GGG + chr1_1:66993410-66993429 None:intergenic 30.0%
GGAAGTTTATGTACAATGTT+GGG + chr1_1:66993411-66993430 None:intergenic 30.0%
TGGAAGTTTATGTACAATGT+TGG + chr1_1:66993412-66993431 None:intergenic 30.0%
!! CCCACATTTTCTGAAAAAAA+TGG - chr1_1:66993476-66993495 Msa0037810:intron 30.0%
AAGAAAGCTTACTGTTTGTT+AGG + chr1_1:66993527-66993546 None:intergenic 30.0%
ATTTCACGAAAATCTTGAAC+CGG - chr1_1:66993927-66993946 Msa0037810:CDS 30.0%
AAAAGGTTAAATAGCACAAG+GGG - chr1_1:66994168-66994187 Msa0037810:intron 30.0%
AATACAGAAATAACATGCCA+GGG + chr1_1:66994311-66994330 None:intergenic 30.0%
TAATACAGAAATAACATGCC+AGG + chr1_1:66994312-66994331 None:intergenic 30.0%
CATTTGCTTGTTTACTTTCA+TGG + chr1_1:66988466-66988485 None:intergenic 30.0%
AAGTAAACAAGCAAATGTCT+CGG - chr1_1:66994520-66994539 Msa0037810:intron 30.0%
TGATTTCCTTATGTTACTGT+AGG - chr1_1:66994761-66994780 Msa0037810:intron 30.0%
TACATTATCAACAAGGGAAT+AGG + chr1_1:66994832-66994851 None:intergenic 30.0%
AGAACAAATACTGCACTTAA+TGG - chr1_1:66988786-66988805 Msa0037810:CDS 30.0%
AAAAAATAAATAGGCGGTGA+AGG + chr1_1:66994892-66994911 None:intergenic 30.0%
! TGTTGTTTAAATGTGAGCTT+GGG - chr1_1:66989163-66989182 Msa0037810:intron 30.0%
!! AGTTTAATGAAGGTACTATG+TGG - chr1_1:66989663-66989682 Msa0037810:intron 30.0%
AAAAAGGAAGAGAAAGAGTG+AGG + chr1_1:66982659-66982678 None:intergenic 35.0%
TGAGGATCGATAACTACTAT+TGG - chr1_1:66982829-66982848 Msa0037810:intron 35.0%
AAGAGGATGAGATAATGAGA+TGG + chr1_1:66982949-66982968 None:intergenic 35.0%
! AAGCTATTCTAGAGAGCTTA+TGG - chr1_1:66983100-66983119 Msa0037810:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - chr1_1:66983165-66983184 Msa0037810:CDS 35.0%
ACGAAAACAGCCTATGAAAT+GGG - chr1_1:66983206-66983225 Msa0037810:intron 35.0%
CTCAATAACCTAATCCAAAC+AGG - chr1_1:66983488-66983507 Msa0037810:intron 35.0%
AACTCAATGTATGGACACTA+TGG - chr1_1:66983671-66983690 Msa0037810:intron 35.0%
! AGAGTGTTCATTGTGCAAAT+GGG - chr1_1:66983694-66983713 Msa0037810:intron 35.0%
TTCATTGTGCAAATGGGTAA+AGG - chr1_1:66983700-66983719 Msa0037810:intron 35.0%
GTGAGTGTGTATATAGCAAT+CGG + chr1_1:66983765-66983784 None:intergenic 35.0%
GATAAAAGGAAGGATAAAGG+AGG - chr1_1:66983893-66983912 Msa0037810:intron 35.0%
! CATTAACAGATGGAACCTTT+TGG + chr1_1:66984022-66984041 None:intergenic 35.0%
TCATCCAAAATAACATGCTC+CGG + chr1_1:66984074-66984093 None:intergenic 35.0%
!!! CTACAGTATCGGTACTTTTA+AGG - chr1_1:66984121-66984140 Msa0037810:intron 35.0%
TTTGATGTTACACTGACAAG+AGG + chr1_1:66984355-66984374 None:intergenic 35.0%
GTGTAACATCAAACCTTGAA+TGG - chr1_1:66984362-66984381 Msa0037810:intron 35.0%
GTTCAGATATAATCAGCACT+TGG - chr1_1:66984476-66984495 Msa0037810:intron 35.0%
AAGCAGAAAACATCCAGTTT+CGG + chr1_1:66984617-66984636 None:intergenic 35.0%
ATCAGTCAGAAACTTATGTC+CGG + chr1_1:66984649-66984668 None:intergenic 35.0%
TACCATGTTGAAACAAGACA+AGG + chr1_1:66984901-66984920 None:intergenic 35.0%
ACACGTGAGGTAAATGATAA+TGG + chr1_1:66985015-66985034 None:intergenic 35.0%
CATCGGAAAGTAAAACTACA+AGG - chr1_1:66985245-66985264 Msa0037810:intron 35.0%
!! TAAAGTTTTGACACAACGTG+TGG - chr1_1:66985309-66985328 Msa0037810:intron 35.0%
TAAAGAAATGATCTCCACGA+TGG + chr1_1:66985357-66985376 None:intergenic 35.0%
TTTGTGTTACCTTTCTCTGT+GGG + chr1_1:66985464-66985483 None:intergenic 35.0%
ATTTGTGTTACCTTTCTCTG+TGG + chr1_1:66985465-66985484 None:intergenic 35.0%
AATTATAATGACAGCGTGCT+TGG - chr1_1:66985535-66985554 Msa0037810:intron 35.0%
GTTGCATATGAGAGAGAAAA+TGG - chr1_1:66985947-66985966 Msa0037810:intron 35.0%
GAAGAATCCACATAGTATAC+TGG + chr1_1:66986061-66986080 None:intergenic 35.0%
TATGACTATGATATGAAGGC+TGG - chr1_1:66986148-66986167 Msa0037810:intron 35.0%
GAACAAAACTCAAGGAAATG+AGG + chr1_1:66986354-66986373 None:intergenic 35.0%
GAGCAATTGAACAAAACTCA+AGG + chr1_1:66986362-66986381 None:intergenic 35.0%
ATTTGTCTCGTATTGTTCTC+AGG - chr1_1:66986396-66986415 Msa0037810:intron 35.0%
CAACAAAATACGTCACTGAA+AGG - chr1_1:66986437-66986456 Msa0037810:intron 35.0%
TTTCGGTATACAAGTGACAT+GGG + chr1_1:66986496-66986515 None:intergenic 35.0%
! TTTTCGGTATACAAGTGACA+TGG + chr1_1:66986497-66986516 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+CGG - chr1_1:66986544-66986563 Msa0037810:intron 35.0%
CATTACTACTTTATGGCTAC+GGG - chr1_1:66986545-66986564 Msa0037810:intron 35.0%
CATCTTGCATACAACAAAAC+AGG + chr1_1:66986766-66986785 None:intergenic 35.0%
AATTGTTAGACAAGCAAAGC+TGG - chr1_1:66986875-66986894 Msa0037810:intron 35.0%
TGGAGTTCTTAATATGAGAC+CGG - chr1_1:66987342-66987361 Msa0037810:intron 35.0%
TATGAGACCGGATTTATTCA+AGG - chr1_1:66987354-66987373 Msa0037810:intron 35.0%
! CGTTTTCTTATGCTTCCTAA+AGG + chr1_1:66987616-66987635 None:intergenic 35.0%
AATATCAGCCAATGCATCTT+TGG + chr1_1:66987663-66987682 None:intergenic 35.0%
TATGTTGGAACCTGTAAGAA+AGG - chr1_1:66987786-66987805 Msa0037810:intron 35.0%
GTCAACTAAGTCATCTCATA+TGG + chr1_1:66987925-66987944 None:intergenic 35.0%
!! GTCAACTGTGTCACTTAATA+TGG - chr1_1:66988143-66988162 Msa0037810:intron 35.0%
! CACATAATTTTGTGCACTAC+TGG - chr1_1:66988331-66988350 Msa0037810:intron 35.0%
! TAATTTTGTGCACTACTGGT+TGG - chr1_1:66988335-66988354 Msa0037810:intron 35.0%
AGCTACTATTTGTAGCTTCA+TGG + chr1_1:66988414-66988433 None:intergenic 35.0%
TAACTCGGAAGGAATATAAG+CGG + chr1_1:66988571-66988590 None:intergenic 35.0%
CAACTCCACATAATATCGTA+TGG - chr1_1:66988648-66988667 Msa0037810:intron 35.0%
TCACTCCATACGATATTATG+TGG + chr1_1:66988656-66988675 None:intergenic 35.0%
! TCGTATGGAGTGATTTCTTT+TGG - chr1_1:66988663-66988682 Msa0037810:intron 35.0%
TCCTTATGTTACTGTAGGAA+TGG - chr1_1:66988700-66988719 Msa0037810:intron 35.0%
CCTTATGTTACTGTAGGAAT+GGG - chr1_1:66988701-66988720 Msa0037810:intron 35.0%
CTTATGTTACTGTAGGAATG+GGG - chr1_1:66988702-66988721 Msa0037810:intron 35.0%
TAAATATGCGGTGAAAGTTG+AGG + chr1_1:66988812-66988831 None:intergenic 35.0%
GCTCGGACAAAATAAATATG+CGG + chr1_1:66988824-66988843 None:intergenic 35.0%
! TTCTATTTCTCGTTCTATGC+AGG - chr1_1:66988902-66988921 Msa0037810:intron 35.0%
CAGCTGTAACAAGAATATGT+GGG + chr1_1:66988944-66988963 None:intergenic 35.0%
CTTGTTACAGCTGGATTAAA+TGG - chr1_1:66988951-66988970 Msa0037810:intron 35.0%
AAAGTTCGTGGCAAAATTGA+GGG - chr1_1:66989116-66989135 Msa0037810:intron 35.0%
! CTGTTGTTTAAATGTGAGCT+TGG - chr1_1:66989162-66989181 Msa0037810:intron 35.0%
!!! TTCTTTTGTTTTGGTTACGG+TGG - chr1_1:66989272-66989291 Msa0037810:intron 35.0%
!!! TCTTTTGTTTTGGTTACGGT+GGG - chr1_1:66989273-66989292 Msa0037810:intron 35.0%
! AGTTTTCCCAAAGAAAATGG+TGG + chr1_1:66989514-66989533 None:intergenic 35.0%
ACACACCCTTAGTTTAATGA+AGG - chr1_1:66989653-66989672 Msa0037810:intron 35.0%
! GTTATGGACTTTTACAGCTA+AGG - chr1_1:66989745-66989764 Msa0037810:intron 35.0%
AGCACTTAAATGAATCCTGT+GGG + chr1_1:66989935-66989954 None:intergenic 35.0%
AAGCACTTAAATGAATCCTG+TGG + chr1_1:66989936-66989955 None:intergenic 35.0%
! CGAACTTCACAAGATCTTTT+CGG + chr1_1:66989993-66990012 None:intergenic 35.0%
AAAGATCTTGTGAAGTTCGA+TGG - chr1_1:66989994-66990013 Msa0037810:intron 35.0%
CCATAGCCATAAAGTAGTAA+TGG + chr1_1:66990027-66990046 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+TGG - chr1_1:66986544-66986563 Msa0037810:intron 35.0%
GGTAAAGCTTTCTTTGTCTT+AGG - chr1_1:66990216-66990235 Msa0037810:intron 35.0%
CATCTTGCATACAACAAAAC+AGG + chr1_1:66986766-66986785 None:intergenic 35.0%
TCTGCCTTTAATTGTTAGAC+AGG - chr1_1:66986866-66986885 Msa0037810:intron 35.0%
!! AGGCTTTCATTTTTAGATCG+AGG - chr1_1:66990601-66990620 Msa0037810:CDS 35.0%
TGGAGTTCTTAATATGAGAC+CGG - chr1_1:66987342-66987361 Msa0037810:intron 35.0%
AGCACTTAAATGAATCCTGT+GGG + chr1_1:66989935-66989954 None:intergenic 35.0%
AAGCACTTAAATGAATCCTG+TGG + chr1_1:66989936-66989955 None:intergenic 35.0%
! CGAACTTCACAAGATCTTTT+CGG + chr1_1:66989993-66990012 None:intergenic 35.0%
AAAGATCTTGTGAAGTTCGA+TGG - chr1_1:66989994-66990013 Msa0037810:intron 35.0%
CCATAGCCATAAAGTAGTAA+TGG + chr1_1:66990027-66990046 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+TGG - chr1_1:66986544-66986563 Msa0037810:intron 35.0%
GGTAAAGCTTTCTTTGTCTT+AGG - chr1_1:66990216-66990235 Msa0037810:intron 35.0%
CATCTTGCATACAACAAAAC+AGG + chr1_1:66986766-66986785 None:intergenic 35.0%
TCTGCCTTTAATTGTTAGAC+AGG - chr1_1:66986866-66986885 Msa0037810:intron 35.0%
!! AGGCTTTCATTTTTAGATCG+AGG - chr1_1:66990601-66990620 Msa0037810:CDS 35.0%
TGGAGTTCTTAATATGAGAC+CGG - chr1_1:66987342-66987361 Msa0037810:intron 35.0%
AGCACTTAAATGAATCCTGT+GGG + chr1_1:66989935-66989954 None:intergenic 35.0%
AAGCACTTAAATGAATCCTG+TGG + chr1_1:66989936-66989955 None:intergenic 35.0%
! CGAACTTCACAAGATCTTTT+CGG + chr1_1:66989993-66990012 None:intergenic 35.0%
AAAGATCTTGTGAAGTTCGA+TGG - chr1_1:66989994-66990013 Msa0037810:intron 35.0%
CCATAGCCATAAAGTAGTAA+TGG + chr1_1:66990027-66990046 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+TGG - chr1_1:66986544-66986563 Msa0037810:intron 35.0%
GGTAAAGCTTTCTTTGTCTT+AGG - chr1_1:66990216-66990235 Msa0037810:intron 35.0%
CATCTTGCATACAACAAAAC+AGG + chr1_1:66986766-66986785 None:intergenic 35.0%
TCTGCCTTTAATTGTTAGAC+AGG - chr1_1:66986866-66986885 Msa0037810:intron 35.0%
!! AGGCTTTCATTTTTAGATCG+AGG - chr1_1:66990601-66990620 Msa0037810:CDS 35.0%
TGGAGTTCTTAATATGAGAC+CGG - chr1_1:66987342-66987361 Msa0037810:intron 35.0%
TATGAGACCGGATTTATTCA+AGG - chr1_1:66987354-66987373 Msa0037810:intron 35.0%
AAAGAAATTTACCTCCCAGT+TGG + chr1_1:66992910-66992929 None:intergenic 35.0%
TTTCATATGTTGGTATGGAG+TGG + chr1_1:66992944-66992963 None:intergenic 35.0%
! TTCTGTTTGACTTTCTCTCA+TGG - chr1_1:66992995-66993014 Msa0037810:intron 35.0%
! ACGTGTTTTATGTTGCCTTT+AGG - chr1_1:66993060-66993079 Msa0037810:intron 35.0%
! CGTTTTCTTATGCTTCCTAA+AGG + chr1_1:66987616-66987635 None:intergenic 35.0%
ATACAAATGCATGCTGTTAG+GGG + chr1_1:66993161-66993180 None:intergenic 35.0%
CAATACAAATGCATGCTGTT+AGG + chr1_1:66993163-66993182 None:intergenic 35.0%
TTCCGTTTAGAAGAAATCAC+AGG - chr1_1:66993348-66993367 Msa0037810:intron 35.0%
TCCGTTTAGAAGAAATCACA+GGG - chr1_1:66993349-66993368 Msa0037810:intron 35.0%
TCCCTGTGATTTCTTCTAAA+CGG + chr1_1:66993353-66993372 None:intergenic 35.0%
! TTTCTGAAAAAAATGGTCGC+TGG - chr1_1:66993483-66993502 Msa0037810:intron 35.0%
! TTCTGAAAAAAATGGTCGCT+GGG - chr1_1:66993484-66993503 Msa0037810:intron 35.0%
CGTTGAAAAGAATACGATCA+TGG + chr1_1:66993654-66993673 None:intergenic 35.0%
! TGATCGTATTCTTTTCAACG+AGG - chr1_1:66993654-66993673 Msa0037810:CDS 35.0%
! CGAGTCTTCCGAATAATTTT+CGG - chr1_1:66993997-66994016 Msa0037810:CDS 35.0%
ATACCTGGAAGAATATCATG+TGG - chr1_1:66994088-66994107 Msa0037810:CDS 35.0%
TACCTGGAAGAATATCATGT+GGG - chr1_1:66994089-66994108 Msa0037810:CDS 35.0%
AATAGCACAAGGGGTAAAAT+TGG - chr1_1:66994177-66994196 Msa0037810:intron 35.0%
AATTATATGACACAGCAGCA+AGG + chr1_1:66994369-66994388 None:intergenic 35.0%
!! ATTTTGTGCACATACTGGTT+TGG - chr1_1:66994386-66994405 Msa0037810:intron 35.0%
TTGTTTCGGGAAATGAGAAA+TGG + chr1_1:66994428-66994447 None:intergenic 35.0%
AGCTACTATTTGTAGCTTCA+TGG + chr1_1:66988414-66988433 None:intergenic 35.0%
TATCTCGGAAGGAATATAAG+CGG + chr1_1:66994622-66994641 None:intergenic 35.0%
TCATTCCATACGATATCATG+TGG + chr1_1:66994711-66994730 None:intergenic 35.0%
TCCTTATGTTACTGTAGGAA+TGG - chr1_1:66988700-66988719 Msa0037810:intron 35.0%
CCTTATGTTACTGTAGGAAT+GGG - chr1_1:66988701-66988720 Msa0037810:intron 35.0%
CTTATGTTACTGTAGGAATG+GGG - chr1_1:66988702-66988721 Msa0037810:intron 35.0%
TTATTCTCTCCTGTAAGGAA+TGG - chr1_1:66994927-66994946 Msa0037810:intron 35.0%
! TTCTATTTCTCGTTCTATGC+AGG - chr1_1:66988902-66988921 Msa0037810:intron 35.0%
CAGCTGTAACAAGAATATGT+GGG + chr1_1:66988944-66988963 None:intergenic 35.0%
CTTGTTACAGCTGGATTAAA+TGG - chr1_1:66988951-66988970 Msa0037810:intron 35.0%
GTGGTCACTAATAATTTGGT+TGG - chr1_1:66995121-66995140 Msa0037810:CDS 35.0%
GTTCAGAATACAAAACACGT+GGG + chr1_1:66995213-66995232 None:intergenic 35.0%
AAAGTTCGTGGCAAAATTGA+GGG - chr1_1:66989116-66989135 Msa0037810:intron 35.0%
! CTGTTGTTTAAATGTGAGCT+TGG - chr1_1:66989162-66989181 Msa0037810:intron 35.0%
GTTGTTTAAATGTGAGCTTG+GGG - chr1_1:66989164-66989183 Msa0037810:intron 35.0%
!! ATGTCTCTGTTCTCTTGTTT+TGG - chr1_1:66995396-66995415 Msa0037810:five_prime_UTR 35.0%
!!! CTGTTCTCTTGTTTTGGTTA+CGG - chr1_1:66995402-66995421 Msa0037810:five_prime_UTR 35.0%
GAAGAAGGTTGAGCACAAAA+TGG - chr1_1:66982791-66982810 Msa0037810:intron 40.0%
! ATAAGAAAGCACATCGGGAT+CGG + chr1_1:66982874-66982893 None:intergenic 40.0%
! ACGGAGATAAGAAAGCACAT+CGG + chr1_1:66982880-66982899 None:intergenic 40.0%
! CGGTGTAATCATTTTCCTGA+CGG + chr1_1:66982899-66982918 None:intergenic 40.0%
GACACTGTGAATGAAGCTTA+TGG - chr1_1:66983027-66983046 Msa0037810:intron 40.0%
GACGAAAACAGCCTATGAAA+TGG - chr1_1:66983205-66983224 Msa0037810:intron 40.0%
TCCAAACAGACCCATTTCAT+AGG + chr1_1:66983219-66983238 None:intergenic 40.0%
GCTGTTCTGTGAGATTGTTT+GGG + chr1_1:66983446-66983465 None:intergenic 40.0%
AGCTGTTCTGTGAGATTGTT+TGG + chr1_1:66983447-66983466 None:intergenic 40.0%
ACATAAGGCCTGTTTGGATT+AGG + chr1_1:66983499-66983518 None:intergenic 40.0%
CTTATGACATAAGGCCTGTT+TGG + chr1_1:66983505-66983524 None:intergenic 40.0%
GTTCTCTTAAACAGTGTTGC+AGG - chr1_1:66983537-66983556 Msa0037810:intron 40.0%
!! GAGAGTGTTCATTGTGCAAA+TGG - chr1_1:66983693-66983712 Msa0037810:intron 40.0%
CAGCACGAATACTACAGTAT+CGG - chr1_1:66984110-66984129 Msa0037810:intron 40.0%
TATTCTTAGACCTGACAAGG+TGG - chr1_1:66984423-66984442 Msa0037810:intron 40.0%
ATTCTTAGACCTGACAAGGT+GGG - chr1_1:66984424-66984443 Msa0037810:intron 40.0%
GCAGCTTCAGAAAAGAATGA+AGG - chr1_1:66984815-66984834 Msa0037810:intron 40.0%
!! CACCTTGTCTTGTTTCAACA+TGG - chr1_1:66984896-66984915 Msa0037810:intron 40.0%
GGCGAAAAACACAAGGAAAT+TGG + chr1_1:66984981-66985000 None:intergenic 40.0%
GCTAATGCCTTAAGTGATAC+AGG - chr1_1:66985105-66985124 Msa0037810:CDS 40.0%
! TTTAAGACCTTCTTCAGGCT+TGG + chr1_1:66985293-66985312 None:intergenic 40.0%
TTCTTATTCCCCACAGAGAA+AGG - chr1_1:66985452-66985471 Msa0037810:intron 40.0%
TTGTGTTACCTTTCTCTGTG+GGG + chr1_1:66985463-66985482 None:intergenic 40.0%
GTTCACTGTATAAACTGCGT+TGG + chr1_1:66985737-66985756 None:intergenic 40.0%
GTTTATCACCTTCCATCTGT+TGG - chr1_1:66985986-66986005 Msa0037810:intron 40.0%
CCACTTTCAAGACTTCTTAG+CGG + chr1_1:66986016-66986035 None:intergenic 40.0%
AAGAAGTCTTGAAAGTGGTC+AGG - chr1_1:66986018-66986037 Msa0037810:intron 40.0%
TCATAGTCATAAACAGAGGG+AGG + chr1_1:66986139-66986158 None:intergenic 40.0%
TCGTATTGTTCTCAGGTTCT+CGG - chr1_1:66986403-66986422 Msa0037810:intron 40.0%
! CGAGCTTCACAAGATCTTTT+CGG + chr1_1:66986513-66986532 None:intergenic 40.0%
AAAGATCTTGTGAAGCTCGA+TGG - chr1_1:66986514-66986533 Msa0037810:intron 40.0%
CCGTAGCCATAAAGTAGTAA+TGG + chr1_1:66986547-66986566 None:intergenic 40.0%
GGTAAACCTTTCTCTGTCTT+AGG - chr1_1:66986738-66986757 Msa0037810:intron 40.0%
TATGTTCCCTCTGTGGTATA+TGG - chr1_1:66986923-66986942 Msa0037810:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG - chr1_1:66986924-66986943 Msa0037810:intron 40.0%
! TTTTAGTCAGTCCGTTCCTT+TGG - chr1_1:66986954-66986973 Msa0037810:intron 40.0%
AACTTCTGCAACCAAAGGAA+CGG + chr1_1:66986968-66986987 None:intergenic 40.0%
TGCAAAACTTCTGCAACCAA+AGG + chr1_1:66986973-66986992 None:intergenic 40.0%
! ATCCCAGTTTCAAGTCATCA+AGG - chr1_1:66987104-66987123 Msa0037810:intron 40.0%
! AGCCTTGATGACTTGAAACT+GGG + chr1_1:66987109-66987128 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG + chr1_1:66987110-66987129 None:intergenic 40.0%
AGGCTTTCATTGTTAGATCG+AGG - chr1_1:66987124-66987143 Msa0037810:intron 40.0%
ACAGCAGCCTTGAATAAATC+CGG + chr1_1:66987364-66987383 None:intergenic 40.0%
!! AACATCCACAAAAGGTACTC+CGG + chr1_1:66987389-66987408 None:intergenic 40.0%
GTTGTCACAACATCCACAAA+AGG + chr1_1:66987397-66987416 None:intergenic 40.0%
!! CTGTTAGGGGAGTATTCATT+TGG + chr1_1:66987688-66987707 None:intergenic 40.0%
CTAAGTCATCTCATATGGGA+CGG + chr1_1:66987920-66987939 None:intergenic 40.0%
!! CTGTGTCACTTAATATGGGA+CGG - chr1_1:66988148-66988167 Msa0037810:intron 40.0%
AATACAGCAGTAACATGCCA+GGG + chr1_1:66988261-66988280 None:intergenic 40.0%
TAATACAGCAGTAACATGCC+AGG + chr1_1:66988262-66988281 None:intergenic 40.0%
ACTCACATACTTAACTCGGA+AGG + chr1_1:66988582-66988601 None:intergenic 40.0%
CCCATTCCTACAGTAACATA+AGG + chr1_1:66988704-66988723 None:intergenic 40.0%
AAGTAGAATTCCTCCTTCCT+AGG + chr1_1:66988732-66988751 None:intergenic 40.0%
CTCTGTAAGGAATGGTTACT+AGG - chr1_1:66988858-66988877 Msa0037810:CDS 40.0%
CCAGCTGTAACAAGAATATG+TGG + chr1_1:66988945-66988964 None:intergenic 40.0%
CCACATATTCTTGTTACAGC+TGG - chr1_1:66988942-66988961 Msa0037810:intron 40.0%
TGGTAAGCATACCTGATTCT+TGG - chr1_1:66988971-66988990 Msa0037810:intron 40.0%
GTTCAGAATACAGAACACGT+GGG + chr1_1:66989092-66989111 None:intergenic 40.0%
! AATTTTGCCACGAACTTTGC+AGG + chr1_1:66989114-66989133 None:intergenic 40.0%
CAAAGTTCGTGGCAAAATTG+AGG - chr1_1:66989115-66989134 Msa0037810:intron 40.0%
!! TTTAAATGTGAGCTTGGTGC+TGG - chr1_1:66989168-66989187 Msa0037810:intron 40.0%
!! TGCTGGACATTTTTCGAAGT+CGG - chr1_1:66989185-66989204 Msa0037810:CDS 40.0%
! TGGGAGAAATGGGAAGTTTT+AGG - chr1_1:66989292-66989311 Msa0037810:intron 40.0%
! GGGAGAAATGGGAAGTTTTA+GGG - chr1_1:66989293-66989312 Msa0037810:intron 40.0%
! GGGAAAACTTTTCTATTCCC+AGG - chr1_1:66989525-66989544 Msa0037810:intron 40.0%
! TCCCAGGAACATTTTATACC+CGG - chr1_1:66989541-66989560 Msa0037810:intron 40.0%
TCATAAGAAGAGTAACCCAC+AGG - chr1_1:66989917-66989936 Msa0037810:intron 40.0%
AATTGTTAGACAGGCAAAGC+TGG - chr1_1:66990352-66990371 Msa0037810:intron 40.0%
TATGTTCCCTCTGTGGTATA+TGG - chr1_1:66986923-66986942 Msa0037810:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG - chr1_1:66986924-66986943 Msa0037810:intron 40.0%
AACTTCTGCAACCAAAGGAA+CGG + chr1_1:66986968-66986987 None:intergenic 40.0%
TGCAAAACTTCTGCAACCAA+AGG + chr1_1:66986973-66986992 None:intergenic 40.0%
! TGCAGAAGTTTTGCAGTCTA+AGG - chr1_1:66986978-66986997 Msa0037810:intron 40.0%
! AGCCTTGATGACTTGAAACT+GGG + chr1_1:66987109-66987128 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG + chr1_1:66987110-66987129 None:intergenic 40.0%
GTTATAGCTCATATACGTGG+AGG - chr1_1:66990634-66990653 Msa0037810:CDS 40.0%
GACCGGATTTAATATGAGAC+CGG - chr1_1:66990835-66990854 Msa0037810:CDS 40.0%
ACCGGATTTAATATGAGACC+GGG - chr1_1:66990836-66990855 Msa0037810:CDS 40.0%
ACCCGGTCTCATATTAAATC+CGG + chr1_1:66990840-66990859 None:intergenic 40.0%
TCATAAGAAGAGTAACCCAC+AGG - chr1_1:66989917-66989936 Msa0037810:intron 40.0%
AATTGTTAGACAGGCAAAGC+TGG - chr1_1:66990352-66990371 Msa0037810:intron 40.0%
TATGTTCCCTCTGTGGTATA+TGG - chr1_1:66986923-66986942 Msa0037810:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG - chr1_1:66986924-66986943 Msa0037810:intron 40.0%
AACTTCTGCAACCAAAGGAA+CGG + chr1_1:66986968-66986987 None:intergenic 40.0%
TGCAAAACTTCTGCAACCAA+AGG + chr1_1:66986973-66986992 None:intergenic 40.0%
! TGCAGAAGTTTTGCAGTCTA+AGG - chr1_1:66986978-66986997 Msa0037810:intron 40.0%
! AGCCTTGATGACTTGAAACT+GGG + chr1_1:66987109-66987128 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG + chr1_1:66987110-66987129 None:intergenic 40.0%
GTTATAGCTCATATACGTGG+AGG - chr1_1:66990634-66990653 Msa0037810:CDS 40.0%
GACCGGATTTAATATGAGAC+CGG - chr1_1:66990835-66990854 Msa0037810:CDS 40.0%
ACCGGATTTAATATGAGACC+GGG - chr1_1:66990836-66990855 Msa0037810:CDS 40.0%
ACCCGGTCTCATATTAAATC+CGG + chr1_1:66990840-66990859 None:intergenic 40.0%
TCATAAGAAGAGTAACCCAC+AGG - chr1_1:66989917-66989936 Msa0037810:intron 40.0%
AATTGTTAGACAGGCAAAGC+TGG - chr1_1:66990352-66990371 Msa0037810:intron 40.0%
TATGTTCCCTCTGTGGTATA+TGG - chr1_1:66986923-66986942 Msa0037810:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG - chr1_1:66986924-66986943 Msa0037810:intron 40.0%
! AGCCTTGATGACTTGAAACT+GGG + chr1_1:66987109-66987128 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG + chr1_1:66987110-66987129 None:intergenic 40.0%
GTTATAGCTCATATACGTGG+AGG - chr1_1:66990634-66990653 Msa0037810:CDS 40.0%
ACAGCAGCCTTGAATAAATC+CGG + chr1_1:66987364-66987383 None:intergenic 40.0%
GAAGTAGTGAGAGGAATAGT+TGG + chr1_1:66987430-66987449 None:intergenic 40.0%
!! CTGTTAGGGGAGTATTCATT+CGG + chr1_1:66987688-66987707 None:intergenic 40.0%
! TTAAAACTAGAGAGGTGTGC+AGG + chr1_1:66993259-66993278 None:intergenic 40.0%
! GGTATAATAGTAGGGGTGTA+GGG + chr1_1:66993383-66993402 None:intergenic 40.0%
! AGGTATAATAGTAGGGGTGT+AGG + chr1_1:66993384-66993403 None:intergenic 40.0%
GGGTCAAGGTATAATAGTAG+GGG + chr1_1:66993390-66993409 None:intergenic 40.0%
GGGGTCAAGGTATAATAGTA+GGG + chr1_1:66993391-66993410 None:intergenic 40.0%
TGGGGTCAAGGTATAATAGT+AGG + chr1_1:66993392-66993411 None:intergenic 40.0%
TATGTACAATGTTGGGGTCA+AGG + chr1_1:66993404-66993423 None:intergenic 40.0%
! GCTTACTGTTTGTTAGGAGT+GGG + chr1_1:66993521-66993540 None:intergenic 40.0%
! AGCTTACTGTTTGTTAGGAG+TGG + chr1_1:66993522-66993541 None:intergenic 40.0%
TTCTTCTTCAACGAGAGAAG+TGG + chr1_1:66993706-66993725 None:intergenic 40.0%
ACGAAAATCTTGAACCGGAA+AGG - chr1_1:66993932-66993951 Msa0037810:CDS 40.0%
ACCTGGAAGAATATCATGTG+GGG - chr1_1:66994090-66994109 Msa0037810:intron 40.0%
!! ACATACTGGTTTGGATGTGT+GGG - chr1_1:66994395-66994414 Msa0037810:intron 40.0%
ACTCACATACTTATCTCGGA+AGG + chr1_1:66994633-66994652 None:intergenic 40.0%
CAACTCCACATGATATCGTA+TGG - chr1_1:66994703-66994722 Msa0037810:intron 40.0%
CCCATTCCTACAGTAACATA+AGG + chr1_1:66988704-66988723 None:intergenic 40.0%
AAGTAGAATTCCTCCTTCCT+AGG + chr1_1:66988732-66988751 None:intergenic 40.0%
TCCTGTAAGGAATGGTTACT+AGG - chr1_1:66994935-66994954 Msa0037810:intron 40.0%
TCCTAGTAACCATTCCTTAC+AGG + chr1_1:66988862-66988881 None:intergenic 40.0%
CCAGCTGTAACAAGAATATG+TGG + chr1_1:66988945-66988964 None:intergenic 40.0%
CCACATATTCTTGTTACAGC+TGG - chr1_1:66988942-66988961 Msa0037810:intron 40.0%
TGGTAAGCATACCTGATTCT+TGG - chr1_1:66988971-66988990 Msa0037810:intron 40.0%
ATAGTTCAGTGCCAAGAATC+AGG + chr1_1:66995062-66995081 None:intergenic 40.0%
GGTTCAGAATACAAAACACG+TGG + chr1_1:66995214-66995233 None:intergenic 40.0%
! AATTTTGCCACGAACTTTGC+AGG + chr1_1:66989114-66989133 None:intergenic 40.0%
CAAAGTTCGTGGCAAAATTG+AGG - chr1_1:66989115-66989134 Msa0037810:intron 40.0%
!!! GACTTTTTTCGAAGTCAGGA+AGG - chr1_1:66995311-66995330 Msa0037810:CDS 40.0%
!!! TTCTCTTGTTTTGGTTACGG+TGG - chr1_1:66995405-66995424 Msa0037810:five_prime_UTR 40.0%
!!! TCTCTTGTTTTGGTTACGGT+GGG - chr1_1:66995406-66995425 Msa0037810:five_prime_UTR 40.0%
AGGAAGAGAAAGAGTGAGGA+CGG + chr1_1:66982655-66982674 None:intergenic 45.0%
! TGGAGCTTTTCAATGACGTG+AGG - chr1_1:66982811-66982830 Msa0037810:intron 45.0%
! CGGAGATAAGAAAGCACATC+GGG + chr1_1:66982879-66982898 None:intergenic 45.0%
TGTGCTTTCTTATCTCCGTC+AGG - chr1_1:66982881-66982900 Msa0037810:intron 45.0%
! GATACCTGACATGACGGAAT+CGG + chr1_1:66982919-66982938 None:intergenic 45.0%
AAAGGCAGTGAAAGCGAAAG+AGG + chr1_1:66982966-66982985 None:intergenic 45.0%
GCCTATGAAATGGGTCTGTT+TGG - chr1_1:66983215-66983234 Msa0037810:intron 45.0%
AACAGTGTAACGTGCTGAGT+AGG - chr1_1:66983735-66983754 Msa0037810:intron 45.0%
TAATAAGGCCCTTTGCGTAC+GGG + chr1_1:66983933-66983952 None:intergenic 45.0%
GTAATAAGGCCCTTTGCGTA+CGG + chr1_1:66983934-66983953 None:intergenic 45.0%
!! GGCATGGTGTCATTAACAGA+TGG + chr1_1:66984032-66984051 None:intergenic 45.0%
GTTAATGACACCATGCCTAC+AGG - chr1_1:66984035-66984054 Msa0037810:intron 45.0%
!! TCCTCCGGAGCATGTTATTT+TGG - chr1_1:66984067-66984086 Msa0037810:intron 45.0%
TCCAAAATAACATGCTCCGG+AGG + chr1_1:66984071-66984090 None:intergenic 45.0%
GCATATGCAGAAGACACCAA+AGG - chr1_1:66984271-66984290 Msa0037810:intron 45.0%
ATCGAGACTCAAGCTCCAAT+TGG - chr1_1:66984325-66984344 Msa0037810:intron 45.0%
ACATCAAACCTTGAATGGGC+TGG - chr1_1:66984367-66984386 Msa0037810:intron 45.0%
TTTCAATCTGCAGCCGAAAC+TGG - chr1_1:66984601-66984620 Msa0037810:intron 45.0%
GAAGTGAGGCGAAAAACACA+AGG + chr1_1:66984988-66985007 None:intergenic 45.0%
TGCCTTAAGTGATACAGGCA+TGG - chr1_1:66985110-66985129 Msa0037810:CDS 45.0%
AGCCATGCCTGTATCACTTA+AGG + chr1_1:66985115-66985134 None:intergenic 45.0%
TCTTGTTCTCGGAAGCTTCA+AGG + chr1_1:66985210-66985229 None:intergenic 45.0%
GATGTTTCCAAGCCTGAAGA+AGG - chr1_1:66985283-66985302 Msa0037810:intron 45.0%
!! GTTTTGACACAACGTGTGGA+TGG - chr1_1:66985313-66985332 Msa0037810:intron 45.0%
!! CGTGCTTGGCTTTTGAATGT+GGG - chr1_1:66985549-66985568 Msa0037810:intron 45.0%
!! GTGCTTGGCTTTTGAATGTG+GGG - chr1_1:66985550-66985569 Msa0037810:intron 45.0%
! CTTTTGAATGTGGGGTCACT+GGG - chr1_1:66985558-66985577 Msa0037810:intron 45.0%
CCGCTAAGAAGTCTTGAAAG+TGG - chr1_1:66986013-66986032 Msa0037810:intron 45.0%
AAGTCTTGAAAGTGGTCAGG+TGG - chr1_1:66986021-66986040 Msa0037810:intron 45.0%
TATTGTTCTCAGGTTCTCGG+AGG - chr1_1:66986406-66986425 Msa0037810:intron 45.0%
AATACGTCACTGAAAGGCAG+TGG - chr1_1:66986443-66986462 Msa0037810:intron 45.0%
ATACGTCACTGAAAGGCAGT+GGG - chr1_1:66986444-66986463 Msa0037810:intron 45.0%
! TTATGGCTACGGGTCTTATG+AGG - chr1_1:66986555-66986574 Msa0037810:intron 45.0%
! TGTGGACAATTTGAGGTCAC+TGG + chr1_1:66987073-66987092 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG - chr1_1:66987072-66987091 Msa0037810:intron 45.0%
GTTATAGCTCATATACGCGG+AGG - chr1_1:66987157-66987176 Msa0037810:intron 45.0%
! TGCATAAATGGCAGAAGTGC+TGG - chr1_1:66987304-66987323 Msa0037810:intron 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG - chr1_1:66987305-66987324 Msa0037810:intron 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG - chr1_1:66987306-66987325 Msa0037810:intron 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG - chr1_1:66987307-66987326 Msa0037810:intron 45.0%
TTATTCAAGGCTGCTGTTGC+CGG - chr1_1:66987367-66987386 Msa0037810:intron 45.0%
TGTCACTGCCAAAGATGCAT+TGG - chr1_1:66987652-66987671 Msa0037810:intron 45.0%
! TGTCACTTAATATGGGACGG+AGG - chr1_1:66988151-66988170 Msa0037810:intron 45.0%
GTCACTTAATATGGGACGGA+GGG - chr1_1:66988152-66988171 Msa0037810:intron 45.0%
AGAAATCACAGCTACATCCC+TGG - chr1_1:66988241-66988260 Msa0037810:intron 45.0%
AGCATACCTGATTCTTGGCT+CGG - chr1_1:66988976-66988995 Msa0037810:intron 45.0%
ATAGTTCCGAGCCAAGAATC+AGG + chr1_1:66988985-66989004 None:intergenic 45.0%
GGTTCAGAATACAGAACACG+TGG + chr1_1:66989093-66989112 None:intergenic 45.0%
TTCTGAACCTGCAAAGTTCG+TGG - chr1_1:66989104-66989123 Msa0037810:intron 45.0%
!! GCTGGACATTTTTCGAAGTC+GGG - chr1_1:66989186-66989205 Msa0037810:CDS 45.0%
!! GACATTTTTCGAAGTCGGGA+AGG - chr1_1:66989190-66989209 Msa0037810:CDS 45.0%
TTTGGTTACGGTGGGAGAAA+TGG - chr1_1:66989281-66989300 Msa0037810:intron 45.0%
TTGGTTACGGTGGGAGAAAT+GGG - chr1_1:66989282-66989301 Msa0037810:intron 45.0%
CCCGGGTATAAAATGTTCCT+GGG + chr1_1:66989545-66989564 None:intergenic 45.0%
! CCCAGGAACATTTTATACCC+GGG - chr1_1:66989542-66989561 Msa0037810:intron 45.0%
TCCCGGGTATAAAATGTTCC+TGG + chr1_1:66989546-66989565 None:intergenic 45.0%
CTTTATGGCTATGGGTCTTG+AGG - chr1_1:66990033-66990052 Msa0037810:intron 45.0%
! TTTTAGTCAGCCCGTTCCTT+TGG - chr1_1:66990431-66990450 Msa0037810:intron 45.0%
ACTTCTGCAACCAAAGGAAC+GGG + chr1_1:66986967-66986986 None:intergenic 45.0%
! TGTGGACAATTTGAGGTCAC+TGG + chr1_1:66987073-66987092 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG - chr1_1:66987072-66987091 Msa0037810:intron 45.0%
GCATACCTGTGGACAATTTG+AGG + chr1_1:66990557-66990576 None:intergenic 45.0%
! CTCCCAGTTTCAAGTCATCA+AGG - chr1_1:66990581-66990600 Msa0037810:CDS 45.0%
ATAGCTCATATACGTGGAGG+TGG - chr1_1:66990637-66990656 Msa0037810:CDS 45.0%
TATACGTGGAGGTGGTGAAA+TGG - chr1_1:66990645-66990664 Msa0037810:CDS 45.0%
ATACGTGGAGGTGGTGAAAT+GGG - chr1_1:66990646-66990665 Msa0037810:CDS 45.0%
! TGCATAAATGGCAGAAGTGC+TGG - chr1_1:66987304-66987323 Msa0037810:intron 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG - chr1_1:66987305-66987324 Msa0037810:intron 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG - chr1_1:66987306-66987325 Msa0037810:intron 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG - chr1_1:66987307-66987326 Msa0037810:intron 45.0%
!! ATGAGACCGGGTTTGCTAAT+TGG - chr1_1:66990848-66990867 Msa0037810:CDS 45.0%
ACTCCACCAATTAGCAAACC+CGG + chr1_1:66987328-66987347 None:intergenic 45.0%
CTTTATGGCTATGGGTCTTG+AGG - chr1_1:66990033-66990052 Msa0037810:intron 45.0%
! TTTTAGTCAGCCCGTTCCTT+TGG - chr1_1:66990431-66990450 Msa0037810:intron 45.0%
ACTTCTGCAACCAAAGGAAC+GGG + chr1_1:66986967-66986986 None:intergenic 45.0%
! TGTGGACAATTTGAGGTCAC+TGG + chr1_1:66987073-66987092 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG - chr1_1:66987072-66987091 Msa0037810:intron 45.0%
GCATACCTGTGGACAATTTG+AGG + chr1_1:66990557-66990576 None:intergenic 45.0%
! CTCCCAGTTTCAAGTCATCA+AGG - chr1_1:66990581-66990600 Msa0037810:CDS 45.0%
ATAGCTCATATACGTGGAGG+TGG - chr1_1:66990637-66990656 Msa0037810:CDS 45.0%
TATACGTGGAGGTGGTGAAA+TGG - chr1_1:66990645-66990664 Msa0037810:CDS 45.0%
ATACGTGGAGGTGGTGAAAT+GGG - chr1_1:66990646-66990665 Msa0037810:CDS 45.0%
! TGCATAAATGGCAGAAGTGC+TGG - chr1_1:66987304-66987323 Msa0037810:intron 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG - chr1_1:66987305-66987324 Msa0037810:intron 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG - chr1_1:66987306-66987325 Msa0037810:intron 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG - chr1_1:66987307-66987326 Msa0037810:intron 45.0%
!! ATGAGACCGGGTTTGCTAAT+TGG - chr1_1:66990848-66990867 Msa0037810:CDS 45.0%
ACTCCACCAATTAGCAAACC+CGG + chr1_1:66987328-66987347 None:intergenic 45.0%
CTTTATGGCTATGGGTCTTG+AGG - chr1_1:66990033-66990052 Msa0037810:intron 45.0%
! TTTTAGTCAGCCCGTTCCTT+TGG - chr1_1:66990431-66990450 Msa0037810:intron 45.0%
! TGTGGACAATTTGAGGTCAC+TGG + chr1_1:66987073-66987092 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG - chr1_1:66987072-66987091 Msa0037810:intron 45.0%
GCATACCTGTGGACAATTTG+AGG + chr1_1:66990557-66990576 None:intergenic 45.0%
! CTCCCAGTTTCAAGTCATCA+AGG - chr1_1:66990581-66990600 Msa0037810:CDS 45.0%
ATAGCTCATATACGTGGAGG+TGG - chr1_1:66990637-66990656 Msa0037810:CDS 45.0%
TATACGTGGAGGTGGTGAAA+TGG - chr1_1:66990645-66990664 Msa0037810:CDS 45.0%
ATACGTGGAGGTGGTGAAAT+GGG - chr1_1:66990646-66990665 Msa0037810:CDS 45.0%
! TGCATAAATGGCAGAAGTGC+TGG - chr1_1:66987304-66987323 Msa0037810:intron 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG - chr1_1:66987305-66987324 Msa0037810:intron 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG - chr1_1:66987306-66987325 Msa0037810:intron 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG - chr1_1:66987307-66987326 Msa0037810:intron 45.0%
!! AACATCCACCAAAGGTACTC+TGG + chr1_1:66992847-66992866 None:intergenic 45.0%
GTTGTCACAACATCCACCAA+AGG + chr1_1:66992855-66992874 None:intergenic 45.0%
TTCCTCTCACTACTTCCAAC+TGG - chr1_1:66992892-66992911 Msa0037810:intron 45.0%
TCCTCTCACTACTTCCAACT+GGG - chr1_1:66992893-66992912 Msa0037810:intron 45.0%
GATGTCACTGTGAGATGCAT+TGG - chr1_1:66993112-66993131 Msa0037810:intron 45.0%
CAGAAAATGTGGGGGTGAAA+GGG + chr1_1:66993469-66993488 None:intergenic 45.0%
TCAGAAAATGTGGGGGTGAA+AGG + chr1_1:66993470-66993489 None:intergenic 45.0%
CCTGGAAGAATATCATGTGG+GGG - chr1_1:66994091-66994110 Msa0037810:intron 45.0%
! AGGGGTGAAAGTACATGTGT+CGG - chr1_1:66994217-66994236 Msa0037810:intron 45.0%
AAGTACATGTGTCGGGGTAT+AGG - chr1_1:66994225-66994244 Msa0037810:intron 45.0%
AGTACATGTGTCGGGGTATA+GGG - chr1_1:66994226-66994245 Msa0037810:intron 45.0%
!! CACATACTGGTTTGGATGTG+TGG - chr1_1:66994394-66994413 Msa0037810:intron 45.0%
!! GAGGCACTGCACTTAACATA+TGG - chr1_1:66994596-66994615 Msa0037810:intron 45.0%
ATACTGCACTTAATGGCCTC+TGG - chr1_1:66988793-66988812 Msa0037810:CDS 45.0%
AAATAGGCGGTGAAGGTTAG+AGG + chr1_1:66994885-66994904 None:intergenic 45.0%
TTCTCGTTCTATGCAGGTCA+AGG - chr1_1:66988908-66988927 Msa0037810:intron 45.0%
TTCTGAACCTGCAAAGTTCG+TGG - chr1_1:66989104-66989123 Msa0037810:intron 45.0%
TTTAAATGTGAGCTTGGGGC+TGG - chr1_1:66995289-66995308 Msa0037810:CDS 45.0%
!!! GCTGGACTTTTTTCGAAGTC+AGG - chr1_1:66995307-66995326 Msa0037810:CDS 45.0%
TTGGTTACGGTGGGAGAAAT+TGG - chr1_1:66989282-66989301 Msa0037810:intron 45.0%
!!! TCTTTTATTTTTATTTATTT+GGG + chr1_1:66982565-66982584 None:intergenic 5.0%
!!! TTCTTTTATTTTTATTTATT+TGG + chr1_1:66982566-66982585 None:intergenic 5.0%
!!! TTTTAAATAAAATAAAAACA+GGG + chr1_1:66984211-66984230 None:intergenic 5.0%
!!! ATTTTAAATAAAATAAAAAC+AGG + chr1_1:66984212-66984231 None:intergenic 5.0%
!! AAATATTTAATAAAACTATA+AGG - chr1_1:66986279-66986298 Msa0037810:intron 5.0%
!! ATTACTATTATAATTATTAT+AGG - chr1_1:66986324-66986343 Msa0037810:intron 5.0%
!! ATAAAAAATTAATGTATAAA+AGG - chr1_1:66994151-66994170 Msa0037810:intron 5.0%
GAACAAGTGAGTGAGTGCAG+TGG - chr1_1:66982519-66982538 Msa0037810:three_prime_UTR 50.0%
GTGAGGACGGAAACAGTTAG+AGG + chr1_1:66982642-66982661 None:intergenic 50.0%
!!! GTGGTTTTGAGAGAACGCAG+CGG + chr1_1:66982688-66982707 None:intergenic 50.0%
TGAGACTGCGACAGAGATTG+CGG + chr1_1:66982747-66982766 None:intergenic 50.0%
GATCGGAGCGAGAATCATCA+CGG + chr1_1:66982857-66982876 None:intergenic 50.0%
!! TACACCGATTCCGTCATGTC+AGG - chr1_1:66982912-66982931 Msa0037810:intron 50.0%
ATCCACGCAACTTGCATGTG+TGG - chr1_1:66983004-66983023 Msa0037810:intron 50.0%
TCCACGCAACTTGCATGTGT+GGG - chr1_1:66983005-66983024 Msa0037810:intron 50.0%
CTGACAAGAGGCTCTCCAAT+TGG + chr1_1:66984343-66984362 None:intergenic 50.0%
CATCATCACCAGCCCATTCA+AGG + chr1_1:66984378-66984397 None:intergenic 50.0%
GGAGAATTTCCCACCTTGTC+AGG + chr1_1:66984436-66984455 None:intergenic 50.0%
!! GCGTGCTTGGCTTTTGAATG+TGG - chr1_1:66985548-66985567 Msa0037810:intron 50.0%
! GCTTTTGAATGTGGGGTCAC+TGG - chr1_1:66985557-66985576 Msa0037810:intron 50.0%
CTTAGCGGTTCACCAACAGA+TGG + chr1_1:66986001-66986020 None:intergenic 50.0%
CAGGCTCCTAAGACAGAGAA+AGG + chr1_1:66986747-66986766 None:intergenic 50.0%
TAGCGCCCATATACCACAGA+GGG + chr1_1:66986932-66986951 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG + chr1_1:66986933-66986952 None:intergenic 50.0%
GCACACCTGTGGACAATTTG+AGG + chr1_1:66987080-66987099 None:intergenic 50.0%
ATAGCTCATATACGCGGAGG+TGG - chr1_1:66987160-66987179 Msa0037810:intron 50.0%
TATACGCGGAGGTGGTGAAA+TGG - chr1_1:66987168-66987187 Msa0037810:intron 50.0%
ATACGCGGAGGTGGTGAAAT+GGG - chr1_1:66987169-66987188 Msa0037810:intron 50.0%
GGAGGCAGTGGTATGAGAAT+GGG - chr1_1:66987191-66987210 Msa0037810:intron 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG - chr1_1:66987319-66987338 Msa0037810:intron 50.0%
!! TGTTGCCGGAGTACCTTTTG+TGG - chr1_1:66987381-66987400 Msa0037810:intron 50.0%
GTCATCTCATATGGGACGGA+GGG + chr1_1:66987916-66987935 None:intergenic 50.0%
AGTCATCTCATATGGGACGG+AGG + chr1_1:66987917-66987936 None:intergenic 50.0%
CCAGCAGTGTGACAGTGAAT+GGG + chr1_1:66988205-66988224 None:intergenic 50.0%
ACCAGCAGTGTGACAGTGAA+TGG + chr1_1:66988206-66988225 None:intergenic 50.0%
TGTAGGAATGGGGTGATCCT+AGG - chr1_1:66988712-66988731 Msa0037810:intron 50.0%
CGTGGGTCTACAGAATGTAC+AGG + chr1_1:66989075-66989094 None:intergenic 50.0%
TAGCGCCCATATACCACAGA+GGG + chr1_1:66986932-66986951 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG + chr1_1:66986933-66986952 None:intergenic 50.0%
TACGTGGAGGTGGTGAAATG+GGG - chr1_1:66990647-66990666 Msa0037810:CDS 50.0%
GGAGGCAGTGGTATGAGAAT+GGG - chr1_1:66987191-66987210 Msa0037810:intron 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG - chr1_1:66987319-66987338 Msa0037810:intron 50.0%
!! AGACCGGGTTTGCTAATTGG+TGG - chr1_1:66990851-66990870 Msa0037810:CDS 50.0%
TAGCGCCCATATACCACAGA+GGG + chr1_1:66986932-66986951 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG + chr1_1:66986933-66986952 None:intergenic 50.0%
TACGTGGAGGTGGTGAAATG+GGG - chr1_1:66990647-66990666 Msa0037810:CDS 50.0%
GGAGGCAGTGGTATGAGAAT+GGG - chr1_1:66987191-66987210 Msa0037810:intron 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG - chr1_1:66987319-66987338 Msa0037810:intron 50.0%
!! AGACCGGGTTTGCTAATTGG+TGG - chr1_1:66990851-66990870 Msa0037810:CDS 50.0%
TAGCGCCCATATACCACAGA+GGG + chr1_1:66986932-66986951 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG + chr1_1:66986933-66986952 None:intergenic 50.0%
TACGTGGAGGTGGTGAAATG+GGG - chr1_1:66990647-66990666 Msa0037810:CDS 50.0%
GGAGGCAGTGGTATGAGAAT+GGG - chr1_1:66987191-66987210 Msa0037810:intron 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG - chr1_1:66987319-66987338 Msa0037810:intron 50.0%
! TGCTGTTGCCAGAGTACCTT+TGG - chr1_1:66992836-66992855 Msa0037810:intron 50.0%
! TGTTGCCAGAGTACCTTTGG+TGG - chr1_1:66992839-66992858 Msa0037810:intron 50.0%
TCCCAGTTGGAAGTAGTGAG+AGG + chr1_1:66992897-66992916 None:intergenic 50.0%
TCTCACTACTTCCAACTGGG+AGG - chr1_1:66992896-66992915 Msa0037810:intron 50.0%
CCCCCACATGATATTCTTCC+AGG + chr1_1:66994094-66994113 None:intergenic 50.0%
! GGGGTGAAAGTACATGTGTC+GGG - chr1_1:66994218-66994237 Msa0037810:intron 50.0%
! GGGTGAAAGTACATGTGTCG+GGG - chr1_1:66994219-66994238 Msa0037810:intron 50.0%
CCAGGGATGTAGCTGTGATT+TGG + chr1_1:66988244-66988263 None:intergenic 50.0%
CCAAATCACAGCTACATCCC+TGG - chr1_1:66994257-66994276 Msa0037810:intron 50.0%
TGTAGGAATGGGGTGATCCT+AGG - chr1_1:66988712-66988731 Msa0037810:intron 50.0%
!! AACGCAGCGGTGGTGGAAAA+AGG + chr1_1:66982675-66982694 None:intergenic 55.0%
!!! GTTTTGAGAGAACGCAGCGG+TGG + chr1_1:66982685-66982704 None:intergenic 55.0%
TCAATCTCCGCTTCCTCCTC+CGG - chr1_1:66982764-66982783 Msa0037810:intron 55.0%
TGCTCAACCTTCTTCGCCAC+CGG + chr1_1:66982786-66982805 None:intergenic 55.0%
TCCCACACATGCAAGTTGCG+TGG + chr1_1:66983009-66983028 None:intergenic 55.0%
ATATCGGCACCCGTACGCAA+AGG - chr1_1:66983921-66983940 Msa0037810:intron 55.0%
TATCGGCACCCGTACGCAAA+GGG - chr1_1:66983922-66983941 Msa0037810:intron 55.0%
AGCATCAGGTCCTGTAGGCA+TGG + chr1_1:66984048-66984067 None:intergenic 55.0%
TACAGGACCTGATGCTCCTC+CGG - chr1_1:66984052-66984071 Msa0037810:intron 55.0%
CAGGCATGGCTTCATGCGTT+AGG - chr1_1:66985124-66985143 Msa0037810:CDS 55.0%
GACACTACTGTCAGCCATCG+TGG - chr1_1:66985340-66985359 Msa0037810:intron 55.0%
GCGGTTCACCAACAGATGGA+AGG + chr1_1:66985997-66986016 None:intergenic 55.0%
CTGGGATCTATGCACACCTG+TGG + chr1_1:66987091-66987110 None:intergenic 55.0%
TACGCGGAGGTGGTGAAATG+GGG - chr1_1:66987170-66987189 Msa0037810:intron 55.0%
GGGAGGCAGTGGTATGAGAA+TGG - chr1_1:66987190-66987209 Msa0037810:intron 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG - chr1_1:66987322-66987341 Msa0037810:intron 55.0%
CATATGGGACGGAGGGAGTA+AGG + chr1_1:66987909-66987928 None:intergenic 55.0%
CCCATTCACTGTCACACTGC+TGG - chr1_1:66988202-66988221 Msa0037810:intron 55.0%
GGAATGGGGTGATCCTAGGA+AGG - chr1_1:66988716-66988735 Msa0037810:intron 55.0%
ATGGGGTGATCCTAGGAAGG+AGG - chr1_1:66988719-66988738 Msa0037810:intron 55.0%
CTGGGAGCTATGCATACCTG+TGG + chr1_1:66990568-66990587 None:intergenic 55.0%
GGGAGGCAGTGGTATGAGAA+TGG - chr1_1:66987190-66987209 Msa0037810:intron 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG - chr1_1:66987322-66987341 Msa0037810:intron 55.0%
CTGGGAGCTATGCATACCTG+TGG + chr1_1:66990568-66990587 None:intergenic 55.0%
GGGAGGCAGTGGTATGAGAA+TGG - chr1_1:66987190-66987209 Msa0037810:intron 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG - chr1_1:66987322-66987341 Msa0037810:intron 55.0%
CTGGGAGCTATGCATACCTG+TGG + chr1_1:66990568-66990587 None:intergenic 55.0%
GGGAGGCAGTGGTATGAGAA+TGG - chr1_1:66987190-66987209 Msa0037810:intron 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG - chr1_1:66987322-66987341 Msa0037810:intron 55.0%
GGAATGGGGTGATCCTAGGA+AGG - chr1_1:66988716-66988735 Msa0037810:intron 55.0%
ATGGGGTGATCCTAGGAAGG+AGG - chr1_1:66988719-66988738 Msa0037810:intron 55.0%
TTGAGAGAACGCAGCGGTGG+TGG + chr1_1:66982682-66982701 None:intergenic 60.0%
GAGGTGACGTCGTCATCGGA+CGG + chr1_1:66982725-66982744 None:intergenic 60.0%
TGCGGAGGTGACGTCGTCAT+CGG + chr1_1:66982729-66982748 None:intergenic 60.0%
GACTGCGACAGAGATTGCGG+AGG + chr1_1:66982744-66982763 None:intergenic 60.0%
TCAACCTTCTTCGCCACCGG+AGG + chr1_1:66982783-66982802 None:intergenic 60.0%
!! GGAGGAGCATCAGGTCCTGT+AGG + chr1_1:66984053-66984072 None:intergenic 60.0%
!! ACATGCTCCGGAGGAGCATC+AGG + chr1_1:66984062-66984081 None:intergenic 60.0%
CAGTGGGCACGTGCTTCAGA+TGG - chr1_1:66986460-66986479 Msa0037810:intron 60.0%
GTGGTGAAATGGGGAGGCAG+TGG - chr1_1:66987179-66987198 Msa0037810:intron 60.0%
TGGGACGGAGGGAGTAAGGA+AGG + chr1_1:66987905-66987924 None:intergenic 60.0%
GTGGAGGTGGTGAAATGGGG+AGG - chr1_1:66990650-66990669 Msa0037810:CDS 60.0%
GTGGTGAAATGGGGAGGCAG+TGG - chr1_1:66987179-66987198 Msa0037810:intron 60.0%
GTGGAGGTGGTGAAATGGGG+AGG - chr1_1:66990650-66990669 Msa0037810:CDS 60.0%
GTGGTGAAATGGGGAGGCAG+TGG - chr1_1:66987179-66987198 Msa0037810:intron 60.0%
GTGGAGGTGGTGAAATGGGG+AGG - chr1_1:66990650-66990669 Msa0037810:CDS 60.0%
GTGGTGAAATGGGGAGGCAG+TGG - chr1_1:66987179-66987198 Msa0037810:intron 60.0%
CGGTGAAGGTTAGAGGCCAG+AGG + chr1_1:66994878-66994897 None:intergenic 60.0%
GTGACGTCGTCATCGGACGG+CGG + chr1_1:66982722-66982741 None:intergenic 65.0%
ATCTCCGCTTCCTCCTCCGG+TGG - chr1_1:66982767-66982786 Msa0037810:intron 65.0%
TTCGCCACCGGAGGAGGAAG+CGG + chr1_1:66982774-66982793 None:intergenic 65.0%
TCCTCCTCCGGTGGCGAAGA+AGG - chr1_1:66982776-66982795 Msa0037810:intron 65.0%
ACCTTCTTCGCCACCGGAGG+AGG + chr1_1:66982780-66982799 None:intergenic 65.0%
GCGGAGGTGGTGAAATGGGG+AGG - chr1_1:66987173-66987192 Msa0037810:intron 65.0%
! TCATCGGACGGCGGTGGTGG+TGG + chr1_1:66982713-66982732 None:intergenic 70.0%
TCGTCATCGGACGGCGGTGG+TGG + chr1_1:66982716-66982735 None:intergenic 70.0%
ACGTCGTCATCGGACGGCGG+TGG + chr1_1:66982719-66982738 None:intergenic 70.0%
!! GACGGCGGTGGTGGTGGTGG+TGG + chr1_1:66982707-66982726 None:intergenic 75.0%
!! TCGGACGGCGGTGGTGGTGG+TGG + chr1_1:66982710-66982729 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 66982444 66995523 66982444 ID=Msa0037810;Name=Msa0037810
chr1_1 mRNA 66982444 66995523 66982444 ID=Msa0037810-mRNA-1;Parent=Msa0037810;Name=Msa0037810-mRNA-1;_AED=0.27;_eAED=0.27;_QI=141|0.84|0.85|1|1|1|14|187|895
chr1_1 exon 66982444 66982758 66982444 ID=Msa0037810-mRNA-1:exon:21756;Parent=Msa0037810-mRNA-1
chr1_1 exon 66982918 66982966 66982918 ID=Msa0037810-mRNA-1:exon:21755;Parent=Msa0037810-mRNA-1
chr1_1 exon 66983119 66983184 66983119 ID=Msa0037810-mRNA-1:exon:21754;Parent=Msa0037810-mRNA-1
chr1_1 exon 66985050 66985191 66985050 ID=Msa0037810-mRNA-1:exon:21753;Parent=Msa0037810-mRNA-1
chr1_1 exon 66988756 66988879 66988756 ID=Msa0037810-mRNA-1:exon:21752;Parent=Msa0037810-mRNA-1
chr1_1 exon 66988995 66989043 66988995 ID=Msa0037810-mRNA-1:exon:21751;Parent=Msa0037810-mRNA-1
chr1_1 exon 66989185 66989250 66989185 ID=Msa0037810-mRNA-1:exon:21750;Parent=Msa0037810-mRNA-1
chr1_1 exon 66990508 66990873 66990508 ID=Msa0037810-mRNA-1:exon:21749;Parent=Msa0037810-mRNA-1
chr1_1 exon 66991391 66991621 66991391 ID=Msa0037810-mRNA-1:exon:21748;Parent=Msa0037810-mRNA-1
chr1_1 exon 66991769 66992060 66991769 ID=Msa0037810-mRNA-1:exon:21747;Parent=Msa0037810-mRNA-1
chr1_1 exon 66992494 66992840 66992494 ID=Msa0037810-mRNA-1:exon:21746;Parent=Msa0037810-mRNA-1
chr1_1 exon 66993526 66993720 66993526 ID=Msa0037810-mRNA-1:exon:21745;Parent=Msa0037810-mRNA-1
chr1_1 exon 66993825 66994108 66993825 ID=Msa0037810-mRNA-1:exon:21744;Parent=Msa0037810-mRNA-1
chr1_1 exon 66995034 66995523 66995034 ID=Msa0037810-mRNA-1:exon:21743;Parent=Msa0037810-mRNA-1
chr1_1 five_prime_UTR 66995383 66995523 66995383 ID=Msa0037810-mRNA-1:five_prime_utr;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66995034 66995382 66995034 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66993825 66994108 66993825 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66993526 66993720 66993526 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66992494 66992840 66992494 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66991769 66992060 66991769 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66991391 66991621 66991391 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66990508 66990873 66990508 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66989185 66989250 66989185 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66988995 66989043 66988995 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66988756 66988879 66988756 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66985050 66985191 66985050 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66983119 66983184 66983119 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66982918 66982966 66982918 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 CDS 66982631 66982758 66982631 ID=Msa0037810-mRNA-1:cds;Parent=Msa0037810-mRNA-1
chr1_1 three_prime_UTR 66982444 66982630 66982444 ID=Msa0037810-mRNA-1:three_prime_utr;Parent=Msa0037810-mRNA-1
Gene Sequence

>Msa0037810

ATGCTAAATCAAAATCTTGTTCGCTTAAATATTAGTCGATTATTCTGCTGCATTCCTCTAACTGTTTCCGTCCTCACTCTTTCTCTTCCTTTTTCCACCACCGCTGCGTTCTCTCAAAACCACCACCACCACCACCGCCGTCCGATGACGACGTCACCTCCGCAATCTCTGTCGCAGTCTCAATCTCCGCTTCCTCCTCCGGTGGCGAAGAAGGTTGAGCACAAAATGGAGCTTTTCAATGACGTGAGGATCGATAACTACTATTGGCTCCGTGATGATTCTCGCTCCGATCCCGATGTGCTTTCTTATCTCCGTCAGGAAAATGATTACACCGATTCCGTCATGTCAGGAACCAAAAAAATTGAAGATAAGCTTTTTGCTGAGATAAAAGGAAGGATAAAGGAGGAAGATATATCGGCACCCGTACGCAAAGGGCCTTATTACTATTATAAGAAAACATTGGAAGGAAAGGAGTATGTTCAATATTGTAGACGCCTTATATCTGATAACCAAAAGGTTCCATCTGTTAATGACACCATGCCTACAGGACCTGATGCTCCTCCGGAGCATGTTATTTTGGATGAGAATATCAAGGCACAACAGCACGAATACTACAGTATCGGTACTTTTAAGGTTAGCCCAAATAACAAGTTAGTAGCATATGCAGAAGACACCAAAGGAGATGAAATATATACTGTTTATGTCATGAATATCGAGACTCAAGCTCCAATTGGAGAGCCTCTTGTCAGTGTAACATCAAACCTTGAATGGGCTGGTGATGATGCTCTAGTTTATGTAACAATGGATAATATTCTTAGACCTGACAAGGCATGGCTTCATGCGTTAGGAACAAAACAATCAAAAGATACTTGTCTTTACGAGGAAAAAGATGATACGTTTTCTCTTGACCTTGAAGCTTCCGAGAACAAGAAATATTTGTTTGTTGCATCGGAAAGTAAAACTACAAGGTTCAATTTTTATCTTGATGTTTCCAAGCCTGAAGAAGGTCTTAAAGTTTTGACACAACGTGTGGATGGTATTGACACTACTGTCAGCCATCGTGGAGATCATTTCTTTATTAAGCGGAGAAGTGATCAATTTTTCAATTCAGAAGTTGTAGCATGTGCTGTCAACAACACCTCTTCAACTACAGTTCTTATTCCCCACAGAGAAAGTGTGAAAATTCAGGAGATACAACTTTTTAGCGATCATCTTGTTGCATATGAGAGAGAAAATGGTCTACCAAAAATAATTGTTTATCACCTTCCATCTGTTGGTGAACCGCTAAGAAGTCTTGAAAGTGGTCAGGTGGTTAGTTTTATTGATCCAGTATACTATGTGGATTCTTCAGAGTCAGAGTTTTCGTCAAGTATTTTACGATTTTCATATAGCTCATTGAAGACGCCTCCCTCTGTTTATGACTATGATATGAAGGCTGGAATTTCAGTTTTGAAGAAGATTGACTCGGTTTTCCTCATTTCCTTGAGTTTTGTTCAATTGCTCTCTATACCTGTATTATTTGTCTCGTATTGTTCTCAGGTTCTCGGAGGTTTTGATGCAACAAAATACGTCACTGAAAGGCAGTGGGCACGTGCTTCAGATGGAACTTTGATTCCCATGTCACTTGTATACCGAAAAGATCTTGTGAAGCTCGATGGATCAGATCCATTACTACTTTATGGCTACGGGTCTTATGAGGTGTGCATAGATCCCAGTTTCAAGTCATCAAGGCTTTCATTGTTAGATCGAGGTTTCATATATGTTATAGCTCATATACGCGGAGGTGGTGAAATGGGGAGGCAGTGGTATGAGAATGGGAAGCTGCTGAAGAAAAAGAACACTTTCACTGATTTTATTGCATGTGCTGAACATTTAATTGAAAAAAAATTCTGTTCCAAGGAAAGACTTTGCATAAATGGCAGAAGTGCTGGGGGTTTGCTAATTGGTGGAGTTCTTAATATGAGACCGGATTTATTCAAGGCTGCTGTTGCCGGAGTACCTTTTGTGGATGTTGTGACAACAATGCTTGATCCAACTATTCCTCTCACTACTTCCGAATGGGAGGAATGGGGTGATCCTAGGAAGGAGGAATTCTACTTCTACATGAAGTCATATTCCCCTGTTGATAATGTCAAAGCACAGAATTACCCACATATTCTTGTTACAGCTGGATTAAATGACCCACGTGTTCTGTATTCTGAACCTGCAAAGTTCGTGGCAAAATTGAGGGATATGAAAACTGATGATAACATACTGTTGTTTAAATGTGAGCTTGGTGCTGGACATTTTTCGAAGTCGGGAAGAAGTGCTGGGGGTTTGCTAATTGGTGGAGTTCTTAATATGAGACCGGATTTATTCAAGGCTGCTGTTGCCAGAGTACCTTTGGTGGATGTTGTGACAACAATGCTTGATCCAACTATTCCTCTCACTACTTCCAACTGGGAGGAATGGGGTGATCCTAGGAAGGAGGAATTCTACTTCTACATGAAGTCCTATTCCCTTGTTGATAATGTCAAGGCACAGAATTACCCACATATTCTTGTTACAGCTGGATTAAATGACCCACGTGTTTTGTATTCTGAACCTGCAAAGTTCGTGGCAAAATTGAGGGATATGAAAACTGATGATAACATACTGTTGTTTAAATGTGAGCTTGGGGCTGGACTTTTTTCGAAGTCAGGAAGGTAA
Protein sequence

>Msa0037810

MLNQNLVRLNISRLFCCIPLTVSVLTLSLPFSTTAAFSQNHHHHHRRPMTTSPPQSLSQSQSPLPPPVAKKVEHKMELFNDVRIDNYYWLRDDSRSDPDVLSYLRQENDYTDSVMSGTKKIEDKLFAEIKGRIKEEDISAPVRKGPYYYYKKTLEGKEYVQYCRRLISDNQKVPSVNDTMPTGPDAPPEHVILDENIKAQQHEYYSIGTFKVSPNNKLVAYAEDTKGDEIYTVYVMNIETQAPIGEPLVSVTSNLEWAGDDALVYVTMDNILRPDKAWLHALGTKQSKDTCLYEEKDDTFSLDLEASENKKYLFVASESKTTRFNFYLDVSKPEEGLKVLTQRVDGIDTTVSHRGDHFFIKRRSDQFFNSEVVACAVNNTSSTTVLIPHRESVKIQEIQLFSDHLVAYERENGLPKIIVYHLPSVGEPLRSLESGQVVSFIDPVYYVDSSESEFSSSILRFSYSSLKTPPSVYDYDMKAGISVLKKIDSVFLISLSFVQLLSIPVLFVSYCSQVLGGFDATKYVTERQWARASDGTLIPMSLVYRKDLVKLDGSDPLLLYGYGSYEVCIDPSFKSSRLSLLDRGFIYVIAHIRGGGEMGRQWYENGKLLKKKNTFTDFIACAEHLIEKKFCSKERLCINGRSAGGLLIGGVLNMRPDLFKAAVAGVPFVDVVTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVLYSEPAKFVAKLRDMKTDDNILLFKCELGAGHFSKSGRSAGGLLIGGVLNMRPDLFKAAVARVPLVDVVTTMLDPTIPLTTSNWEEWGDPRKEEFYFYMKSYSLVDNVKAQNYPHILVTAGLNDPRVLYSEPAKFVAKLRDMKTDDNILLFKCELGAGLFSKSGR*