AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0115490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115490 MtrunA17_Chr1g0212361 98.175 767 10 2 1 763 1 767 0.0 1550
Msa0115490 MtrunA17_Chr8g0374081 30.844 723 424 21 98 757 75 784 4.74e-87 291
Msa0115490 MtrunA17_Chr3g0143651 25.984 762 456 25 58 757 7 722 3.73e-56 205
Msa0115490 MtrunA17_Chr1g0157311 25.761 788 477 26 31 757 42 782 5.43e-53 197
Msa0115490 MtrunA17_Chr5g0420581 29.466 431 242 10 330 704 2 426 1.52e-52 188
Msa0115490 MtrunA17_Chr1g0157291 46.250 160 84 2 485 643 8 166 8.85e-42 150
Msa0115490 MtrunA17_Chr5g0420571 30.502 259 163 5 80 335 76 320 1.07e-30 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0115490 AT1G50380.2 75.877 713 169 1 47 759 62 771 0.0 1167
Msa0115490 AT1G50380.1 76.967 699 161 0 61 759 7 705 0.0 1164
Msa0115490 AT1G69020.2 30.000 760 463 14 61 762 40 788 6.98e-110 353
Msa0115490 AT1G69020.1 29.908 759 433 15 61 762 40 756 2.18e-105 340
Msa0115490 AT5G66960.1 28.377 733 432 18 98 757 78 790 1.77e-73 255
Msa0115490 AT1G76140.2 26.738 748 463 22 62 760 78 789 6.51e-55 202
Msa0115490 AT1G76140.1 26.764 751 462 22 62 760 78 792 7.32e-55 202
Msa0115490 AT1G20380.1 25.844 770 467 28 51 760 3 728 4.72e-51 191
Msa0115490 AT1G20380.2 27.977 529 319 19 273 760 59 566 1.92e-44 169

Find 185 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTACTAACTTGTTATT+TGG 0.087936 1_3:-34361619 None:intergenic
TCAGATCCATTACTACTTTA+TGG 0.129739 1_3:+34365135 Msa0115490:CDS
AAGGAAAGACTTTGCATAAA+TGG 0.175876 1_3:+34365889 Msa0115490:CDS
GTTACATTGCCATCAATTTC+AGG 0.200205 1_3:+34368894 Msa0115490:three_prime_UTR
CTTGTTACAGCTGGATTAAA+TGG 0.255776 1_3:+34367554 Msa0115490:CDS
TTTCTTTAGTGTGAAAATTC+AGG 0.259077 1_3:+34363278 Msa0115490:intron
TCCTCCGGAGCATGTTATTT+TGG 0.279354 1_3:+34361433 Msa0115490:CDS
ATGCTACTAACTTGTTATTT+GGG 0.325588 1_3:-34361618 None:intergenic
AACGCGGCGGTGGTGGAAAA+AGG 0.330472 1_3:-34360088 None:intergenic
CTTCACAGCATCCACACTTT+AGG 0.339268 1_3:-34368769 None:intergenic
TGCATAAATGGCAGAAGTGC+TGG 0.343823 1_3:+34365901 Msa0115490:CDS
AGTATATATTTCATCTCCTT+TGG 0.347787 1_3:-34361653 None:intergenic
TTATTCAAGGCTGCTGTTGC+CGG 0.348454 1_3:+34365964 Msa0115490:CDS
AAGCCTTGATGACTTGAAAC+TGG 0.362460 1_3:-34365704 None:intergenic
TTTGTTCTTACATTATCAAC+AGG 0.370728 1_3:-34367371 None:intergenic
TCCTATTGTTCTCAGGTTCT+CGG 0.373350 1_3:+34365000 Msa0115490:intron
CATTAACAGATGGAACCTTT+TGG 0.374692 1_3:-34361385 None:intergenic
AAACAAATATTTCTTGTTCT+CGG 0.375239 1_3:-34362598 None:intergenic
GTTGCATATGAGAGAGAAAA+TGG 0.377111 1_3:+34363327 Msa0115490:CDS
TCCTCCTCCGGTGGCGAAGA+AGG 0.381536 1_3:+34360177 Msa0115490:CDS
CATTGAGTATATGGCAATAA+AGG 0.386482 1_3:+34368979 Msa0115490:three_prime_UTR
TAGTCATGTTTAGAGTCTTT+AGG 0.391930 1_3:-34368725 None:intergenic
GAAATATTTGTTTGTTGCAT+CGG 0.392351 1_3:+34362608 Msa0115490:CDS
GGAGGATTTCCCACCTTGTC+AGG 0.392612 1_3:-34361799 None:intergenic
GACTAATCATCTTTAGTCTT+GGG 0.397517 1_3:+34368743 Msa0115490:exon
GAAGAATCCACATAGTATAC+TGG 0.404464 1_3:-34363438 None:intergenic
ATACGCGGAGGTGGTGAAAT+GGG 0.407509 1_3:+34365766 Msa0115490:CDS
TTTAAGACCTTCTTCAGGCT+TGG 0.409306 1_3:-34362670 None:intergenic
ATGTAGATTTGAGAAACTTC+AGG 0.410218 1_3:+34368677 Msa0115490:intron
GGGAGGCAGTGGTATGAGAA+TGG 0.419208 1_3:+34365787 Msa0115490:CDS
TGAGATAAAAGGAAGGATAA+AGG 0.422851 1_3:+34361256 Msa0115490:CDS
ATTTATGCAAAGTCTTTCCT+TGG 0.424710 1_3:-34365887 None:intergenic
CCACATATTCTTGTTACAGC+TGG 0.425203 1_3:+34367545 Msa0115490:CDS
TGCTCGACCTTCTTCGCCAC+CGG 0.425802 1_3:-34360184 None:intergenic
CTGACAAGAGGCTCTCCAAT+TGG 0.430484 1_3:-34361706 None:intergenic
TACAGGACCTGATGCTCCTC+CGG 0.432220 1_3:+34361418 Msa0115490:CDS
CGGAGATAGGAAAGCACATC+GGG 0.432650 1_3:-34360277 None:intergenic
GATAAAGGAGGAAGATATAT+CGG 0.433161 1_3:+34361271 Msa0115490:CDS
TCTTGTTCTCGGAAGCTTCA+AGG 0.434998 1_3:-34362587 None:intergenic
TTCTTATTCCCCACAGAGAA+AGG 0.435804 1_3:+34362832 Msa0115490:CDS
GAAGAAGGTCGAGCACAAAA+TGG 0.436268 1_3:+34360192 Msa0115490:CDS
ACATGCTCCGGAGGAGCATC+AGG 0.436439 1_3:-34361425 None:intergenic
AGGAAGAGAAAGAGTGAGGA+CGG 0.436466 1_3:-34360068 None:intergenic
GTGAGAGAACGCGGCGGTGG+TGG 0.438627 1_3:-34360095 None:intergenic
TGACTAATCATCTTTAGTCT+TGG 0.440202 1_3:+34368742 Msa0115490:exon
GTGTAACATCAAACCTTGAA+TGG 0.441077 1_3:+34361728 Msa0115490:CDS
TAGGAAAGTCCTGAAATTGA+TGG 0.442634 1_3:-34368903 None:intergenic
ACCTTCTTCGCCACCGGAGG+AGG 0.442989 1_3:-34360178 None:intergenic
TCATTCTCCGCTTCCTCCTC+CGG 0.443491 1_3:+34360165 Msa0115490:CDS
TTTAAATGTGAGCTTGGTGC+TGG 0.444477 1_3:+34367771 Msa0115490:CDS
TATACGCGGAGGTGGTGAAA+TGG 0.448082 1_3:+34365765 Msa0115490:CDS
GTGGTGAAATGGGGAGGCAG+TGG 0.448275 1_3:+34365776 Msa0115490:CDS
TTCGCCACCGGAGGAGGAAG+CGG 0.452605 1_3:-34360172 None:intergenic
TATGAGACCGGATTTATTCA+AGG 0.457431 1_3:+34365951 Msa0115490:CDS
CATCAAGTATCTCACATCAT+AGG 0.459129 1_3:-34368862 None:intergenic
TTATGGCTACGGGTCTTATG+AGG 0.462890 1_3:+34365152 Msa0115490:CDS
ATCGAGACTCAAGCTCCAAT+TGG 0.464487 1_3:+34361691 Msa0115490:CDS
GATGTTTCCAAGCCTGAAGA+AGG 0.469052 1_3:+34362663 Msa0115490:CDS
AAGTAGAATTCCTCCTTCCT+AGG 0.474833 1_3:-34367329 None:intergenic
TCCTCTCACTACTTCCGAAT+GGG 0.476665 1_3:+34366032 Msa0115490:CDS
AAAGAAATTTACCTCCCATT+CGG 0.479223 1_3:-34366046 None:intergenic
GCATAAATGGCAGAAGTGCT+GGG 0.479981 1_3:+34365902 Msa0115490:CDS
TGTTTATGACTATGATATGA+AGG 0.480029 1_3:+34363524 Msa0115490:CDS
CCAGCTGTAACAAGAATATG+TGG 0.480307 1_3:-34367545 None:intergenic
CAAAGTTCGTGGCAAAATTG+AGG 0.482652 1_3:+34367718 Msa0115490:CDS
CAGGCATGGCTTCATGCGTT+AGG 0.483360 1_3:+34362504 Msa0115490:intron
CCATTACTACTTTATGGCTA+CGG 0.485771 1_3:+34365141 Msa0115490:CDS
AAAACTTTAAGACCTTCTTC+AGG 0.489996 1_3:-34362675 None:intergenic
CATTACTACTTTATGGCTAC+GGG 0.491993 1_3:+34365142 Msa0115490:CDS
GTTTATCACCTTCCATCTGT+TGG 0.494857 1_3:+34363366 Msa0115490:CDS
TTCTGAACCTGCAAAGTTCG+TGG 0.496672 1_3:+34367707 Msa0115490:CDS
GAAGTAGTGAGAGGAATAGT+TGG 0.497815 1_3:-34366024 None:intergenic
TGCTGGTTTCACTTAAGCTA+TGG 0.498783 1_3:-34368812 None:intergenic
GTGGTGAGAGAACGCGGCGG+TGG 0.500012 1_3:-34360098 None:intergenic
GGAGGCAGTGGTATGAGAAT+GGG 0.502337 1_3:+34365788 Msa0115490:CDS
CATCATCACCAGCCCATTCA+AGG 0.504061 1_3:-34361741 None:intergenic
CCGTAGCCATAAAGTAGTAA+TGG 0.504218 1_3:-34365141 None:intergenic
TGTAGGAATGGGGTGATCCT+AGG 0.505042 1_3:+34367312 Msa0115490:intron
AAGTCGTCATCGGACGGCGG+TGG 0.505447 1_3:-34360117 None:intergenic
TTAGAATCGATAACTACTAC+TGG 0.506653 1_3:+34360230 Msa0115490:CDS
AAAGTTCGTGGCAAAATTGA+GGG 0.507662 1_3:+34367719 Msa0115490:CDS
GATACCTGACATGACGGAAT+CGG 0.508137 1_3:-34360317 None:intergenic
CTATGATGTGAGATACTTGA+TGG 0.509337 1_3:+34368863 Msa0115490:three_prime_UTR
CCACTTTCAAGACTTCTTAG+CGG 0.515524 1_3:-34363393 None:intergenic
ATGTGAGATACTTGATGGTA+TGG 0.515818 1_3:+34368868 Msa0115490:three_prime_UTR
ACAGCAGCCTTGAATAAATC+CGG 0.515832 1_3:-34365958 None:intergenic
TTTGCGTTACCTTTCTCTGT+GGG 0.516043 1_3:-34362841 None:intergenic
TACACCGATTCCGTCATGTC+AGG 0.516554 1_3:+34360313 Msa0115490:CDS
AAGAAGTCTTGAAAGTGGTC+AGG 0.517098 1_3:+34363398 Msa0115490:CDS
TAAGAAAACATTGGAAGGAA+AGG 0.518481 1_3:+34361325 Msa0115490:CDS
TCATCCAAAATAACATGCTC+CGG 0.519337 1_3:-34361437 None:intergenic
CTGTGAAGAGATGGAATGAT+TGG 0.521765 1_3:+34368784 Msa0115490:three_prime_UTR
ATCCCAGTTTCAAGTCATCA+AGG 0.523752 1_3:+34365701 Msa0115490:CDS
GTGTGGATGCTGTGAAGAGA+TGG 0.525321 1_3:+34368775 Msa0115490:three_prime_UTR
CCTTATATCTGATAACCAAA+AGG 0.525429 1_3:+34361370 Msa0115490:CDS
TGGAGTTCTTAATATGAGAC+CGG 0.525945 1_3:+34365939 Msa0115490:CDS
GTTAATGACACCATGCCTAC+AGG 0.526408 1_3:+34361401 Msa0115490:CDS
GTAATAAGGCCCTTTGCGTA+CGG 0.527741 1_3:-34361297 None:intergenic
AGAACCAGGGTATATGCTGC+TGG 0.529916 1_3:-34368829 None:intergenic
TAATAAGGCCCTTTGCGTAC+GGG 0.530860 1_3:-34361296 None:intergenic
TTACTATTATAAGAAAACAT+TGG 0.531391 1_3:+34361316 Msa0115490:CDS
GTTGTCACAACATCCACAAA+AGG 0.531779 1_3:-34365991 None:intergenic
CTGTTGTTTAAATGTGAGCT+TGG 0.533236 1_3:+34367765 Msa0115490:CDS
ATAGGAAAGCACATCGGGAT+CGG 0.541107 1_3:-34360272 None:intergenic
TGTAACATCAAACCTTGAAT+GGG 0.542086 1_3:+34361729 Msa0115490:CDS
CAGTGGGCACGTGCTTCAGA+TGG 0.549003 1_3:+34365057 Msa0115490:CDS
TATTGATCCAGTATACTATG+TGG 0.549092 1_3:+34363431 Msa0115490:CDS
GTGAGGACGGAAACAGTTAG+TGG 0.550395 1_3:-34360055 None:intergenic
AATAAGAACTGTAGTTGAAG+AGG 0.553201 1_3:-34362817 None:intergenic
TATGACTATGATATGAAGGC+TGG 0.555817 1_3:+34363528 Msa0115490:CDS
TATTATAAGAAAACATTGGA+AGG 0.558599 1_3:+34361320 Msa0115490:CDS
AAAGATCTTGTGAAGCTCGA+TGG 0.561830 1_3:+34365111 Msa0115490:CDS
GAGATCATTTCTTTATTAAG+CGG 0.562126 1_3:+34362742 Msa0115490:CDS
CATCGGAAAGTAAAACTACA+AGG 0.563926 1_3:+34362625 Msa0115490:CDS
AGCATCAGGTCCTGTAGGCA+TGG 0.564851 1_3:-34361411 None:intergenic
TTCCTCTCACTACTTCCGAA+TGG 0.570331 1_3:+34366031 Msa0115490:CDS
CATAAATGGCAGAAGTGCTG+GGG 0.572685 1_3:+34365903 Msa0115490:CDS
TATCGGCACCCGTACGCAAA+GGG 0.574415 1_3:+34361288 Msa0115490:CDS
GCTAAACATATTTGCAAACA+AGG 0.574925 1_3:-34368943 None:intergenic
CAGCACAAATACTACAGTAT+CGG 0.579306 1_3:+34361476 Msa0115490:CDS
CAACAAAATACGTCACTGAA+AGG 0.580218 1_3:+34365034 Msa0115490:CDS
CTTCTGTTACTGTAGGAATG+GGG 0.581271 1_3:+34367302 Msa0115490:intron
ATAGCTCATATACGCGGAGG+TGG 0.584461 1_3:+34365757 Msa0115490:CDS
TGCTCTAGTTTATGTAACAA+TGG 0.586588 1_3:+34361762 Msa0115490:CDS
AATACGTCACTGAAAGGCAG+TGG 0.587769 1_3:+34365040 Msa0115490:CDS
TGGTAGAATGAATGATGATA+CGG 0.587894 1_3:-34359869 None:intergenic
TCGACCTTCTTCGCCACCGG+AGG 0.588350 1_3:-34360181 None:intergenic
AACATCCACAAAAGGTACTC+CGG 0.590525 1_3:-34365983 None:intergenic
GATAAAAGGAAGGATAAAGG+AGG 0.590891 1_3:+34361259 Msa0115490:CDS
TGCGGAGGTGAAGTCGTCAT+CGG 0.590943 1_3:-34360127 None:intergenic
GAGGTGAAGTCGTCATCGGA+CGG 0.591838 1_3:-34360123 None:intergenic
TAGGAAGAATGTATAAGTGA+AGG 0.591931 1_3:-34368706 None:intergenic
AGGCTTTCATTGTTAGATCG+AGG 0.595178 1_3:+34365721 Msa0115490:CDS
GGAATGGGGTGATCCTAGGA+AGG 0.598189 1_3:+34367316 Msa0115490:intron
CCGCTAAGAAGTCTTGAAAG+TGG 0.599154 1_3:+34363393 Msa0115490:CDS
ATTTGCGTTACCTTTCTCTG+TGG 0.601829 1_3:-34362842 None:intergenic
ACATCAAACCTTGAATGGGC+TGG 0.602081 1_3:+34361733 Msa0115490:CDS
TGAGACTGTGACAGAGATTG+CGG 0.609474 1_3:-34360145 None:intergenic
TACGCGGAGGTGGTGAAATG+GGG 0.610390 1_3:+34365767 Msa0115490:CDS
TAGGCTTAGAAGTTAGAACC+AGG 0.613666 1_3:-34368843 None:intergenic
TTCTCCGCTTCCTCCTCCGG+TGG 0.614838 1_3:+34360168 Msa0115490:CDS
ACGGAGATAGGAAAGCACAT+CGG 0.617599 1_3:-34360278 None:intergenic
ATATCGGCACCCGTACGCAA+AGG 0.621018 1_3:+34361287 Msa0115490:CDS
GGAGGAGCATCAGGTCCTGT+AGG 0.622563 1_3:-34361416 None:intergenic
GCGGTTCACCAACAGATGGA+AGG 0.623497 1_3:-34363374 None:intergenic
TTGCGTTACCTTTCTCTGTG+GGG 0.623901 1_3:-34362840 None:intergenic
AAGTCTTGAAAGTGGTCAGG+TGG 0.624496 1_3:+34363401 Msa0115490:CDS
GGCATGGTGTCATTAACAGA+TGG 0.625215 1_3:-34361395 None:intergenic
ATTATTGATACCTGACATGA+CGG 0.625741 1_3:-34360323 None:intergenic
CTTAGCGGTTCACCAACAGA+TGG 0.627063 1_3:-34363378 None:intergenic
TTTGATGTTACACTGACAAG+AGG 0.630655 1_3:-34361718 None:intergenic
ACGGCGGTGGTGAGAGAACG+CGG 0.632285 1_3:-34360104 None:intergenic
TTTCGGTATACAAGTGACAT+GGG 0.632469 1_3:-34365090 None:intergenic
TCTCACTACTTCCGAATGGG+AGG 0.634084 1_3:+34366035 Msa0115490:CDS
TCATAGTCATAAACAGAAGG+AGG 0.634665 1_3:-34363516 None:intergenic
TTGTTCTTACATTATCAACA+GGG 0.634748 1_3:-34367370 None:intergenic
ATATCATAGTCATAAACAGA+AGG 0.634817 1_3:-34363519 None:intergenic
GCGGAGGTGGTGAAATGGGG+AGG 0.638605 1_3:+34365770 Msa0115490:CDS
GACACTACTGTCAGCCATCG+TGG 0.641773 1_3:+34362720 Msa0115490:CDS
AGCCTTGATGACTTGAAACT+GGG 0.642429 1_3:-34365703 None:intergenic
TCCCATTCGGAAGTAGTGAG+AGG 0.647947 1_3:-34366033 None:intergenic
TAATATTCTTAGACCTGACA+AGG 0.648307 1_3:+34361786 Msa0115490:CDS
ATACGTCACTGAAAGGCAGT+GGG 0.650078 1_3:+34365041 Msa0115490:CDS
TGTTCTTACATTATCAACAG+GGG 0.651767 1_3:-34367369 None:intergenic
GGTTCAGAATACAGAACACG+TGG 0.652073 1_3:-34367693 None:intergenic
TCAAAACAAGCACAAAGCGT+GGG 0.653200 1_3:-34369003 None:intergenic
GCATATGCAGAAGACACCAA+AGG 0.654059 1_3:+34361637 Msa0115490:CDS
TAAAGAAATGATCTCCACGA+TGG 0.660652 1_3:-34362734 None:intergenic
AAAAGATACTTGTCTTTACG+AGG 0.660853 1_3:+34362539 Msa0115490:CDS
TTCAGAAATGCATTATGACA+TGG 0.664136 1_3:-34359889 None:intergenic
GTCTTGGGATGCCTAAAGTG+TGG 0.667262 1_3:+34368758 Msa0115490:exon
TATTGTTCTCAGGTTCTCGG+AGG 0.667662 1_3:+34365003 Msa0115490:intron
GTGAAGTCGTCATCGGACGG+CGG 0.673247 1_3:-34360120 None:intergenic
CAGCTGTAACAAGAATATGT+GGG 0.675217 1_3:-34367544 None:intergenic
ATGGGGTGATCCTAGGAAGG+AGG 0.677198 1_3:+34367319 Msa0115490:CDS
TCCAAAATAACATGCTCCGG+AGG 0.678194 1_3:-34361434 None:intergenic
GAAACCAGCAGCATATACCC+TGG 0.686805 1_3:+34368825 Msa0115490:three_prime_UTR
GTTATAGCTCATATACGCGG+AGG 0.697147 1_3:+34365754 Msa0115490:CDS
ATAAATGGCAGAAGTGCTGG+GGG 0.697795 1_3:+34365904 Msa0115490:CDS
GATCGGAGCGAGAATCATCA+CGG 0.699674 1_3:-34360255 None:intergenic
AGGCTTAGAAGTTAGAACCA+GGG 0.707056 1_3:-34368842 None:intergenic
GACTGTGACAGAGATTGCGG+AGG 0.745405 1_3:-34360142 None:intergenic
TATGTTATAGCTCATATACG+CGG 0.752567 1_3:+34365751 Msa0115490:CDS
GTTCAGAATACAGAACACGT+GGG 0.775180 1_3:-34367692 None:intergenic
GCGGTGGTGAGAGAACGCGG+CGG 0.860594 1_3:-34360101 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTATTTTATTTATT+GGG - chr1_3:34359974-34359993 None:intergenic 0.0%
!!! TTAAAATTTTATTTCTTTTC+AGG + chr1_3:34361591-34361610 Msa0115490:intron 10.0%
!!! AAAAAGGTAATTAATTATTT+TGG - chr1_3:34363073-34363092 None:intergenic 10.0%
!!! GTTTTATTAAATATTTAAAC+AGG - chr1_3:34363655-34363674 None:intergenic 10.0%
!! TCTAATTACTATTATAATTA+TGG + chr1_3:34363700-34363719 Msa0115490:intron 10.0%
!! CAAAAAAAATAAAATGAAAA+TGG - chr1_3:34364491-34364510 None:intergenic 10.0%
!!! TTTTTATTTTAAATTTCAAG+TGG + chr1_3:34364766-34364785 Msa0115490:intron 10.0%
!! TATTATTTATCTTTGTATAT+TGG - chr1_3:34366588-34366607 None:intergenic 10.0%
!!! ATACAAAAACAATTTTACAT+TGG - chr1_3:34360691-34360710 None:intergenic 15.0%
!!! ATTCATATTTTTGAATTTCT+AGG + chr1_3:34361203-34361222 Msa0115490:intron 15.0%
!!! GTTTTCTTATAATAGTAATA+AGG - chr1_3:34361314-34361333 None:intergenic 15.0%
!! TTACTATTATAAGAAAACAT+TGG + chr1_3:34361316-34361335 Msa0115490:CDS 15.0%
!!! TTTTCAATTTCAATTTGTTT+AGG + chr1_3:34361871-34361890 Msa0115490:intron 15.0%
!!! TGTGAATTGTTTTTTAATTA+AGG - chr1_3:34362085-34362104 None:intergenic 15.0%
!! TAGATATTTGAATATATACA+AGG + chr1_3:34362303-34362322 Msa0115490:intron 15.0%
!!! AATAATTAATTACCTTTTTG+AGG + chr1_3:34363074-34363093 Msa0115490:intron 15.0%
!!! AAAGTGATTTTTTTTAATAG+GGG - chr1_3:34363775-34363794 None:intergenic 15.0%
!!! GAAAGTGATTTTTTTTAATA+GGG - chr1_3:34363776-34363795 None:intergenic 15.0%
!! TATGAATAATTAATAGTCTT+AGG + chr1_3:34363896-34363915 Msa0115490:intron 15.0%
!! TTTAAGCCTATAATTATTAT+AGG + chr1_3:34364921-34364940 Msa0115490:intron 15.0%
!! TGAAAACCTATAATAATTAT+AGG - chr1_3:34364930-34364949 None:intergenic 15.0%
!!! ATCCATATTTATATTTCTTT+TGG + chr1_3:34365398-34365417 Msa0115490:intron 15.0%
!!! TTTAAATCATTTTCATATGT+TGG - chr1_3:34366093-34366112 None:intergenic 15.0%
!! TGTATATTGGTAAAAAAATA+TGG - chr1_3:34366575-34366594 None:intergenic 15.0%
!! TAAAGATAAAAAATATGCAT+TGG + chr1_3:34366696-34366715 Msa0115490:intron 15.0%
!! ATTCAGTTTATTTATCAATT+TGG - chr1_3:34366886-34366905 None:intergenic 15.0%
!!! AAATCATGTTGAAATTTTTT+CGG - chr1_3:34366980-34366999 None:intergenic 15.0%
!!! TATTATAATCCCTATTTTTA+AGG - chr1_3:34368060-34368079 None:intergenic 15.0%
!! TTAAAAATAGGGATTATAAT+AGG + chr1_3:34368059-34368078 Msa0115490:intron 15.0%
!!! AGTTTAATAAATTTTATTCC+CGG - chr1_3:34368178-34368197 None:intergenic 15.0%
!!! AAACCATGAAATTTTTAAAA+TGG + chr1_3:34368543-34368562 Msa0115490:intron 15.0%
!!! TTTTTTTTCTCAAATGTATT+TGG + chr1_3:34368611-34368630 Msa0115490:intron 15.0%
!!! TGCATTTCTGAATATTTTTT+AGG + chr1_3:34359900-34359919 Msa0115490:five_prime_UTR 20.0%
!!! TTCATTCAGAATATATTTTG+AGG - chr1_3:34360460-34360479 None:intergenic 20.0%
!!! ATAAAAAGGCTTTTGAAATT+AGG + chr1_3:34361151-34361170 Msa0115490:intron 20.0%
!!! AAGCTTATCTTCAATTTTTT+TGG - chr1_3:34361231-34361250 None:intergenic 20.0%
!! TATTATAAGAAAACATTGGA+AGG + chr1_3:34361320-34361339 Msa0115490:CDS 20.0%
!! TTAGATCATATCATTATCAT+GGG + chr1_3:34361510-34361529 Msa0115490:intron 20.0%
!! TATCTGAACAATTAAATACT+GGG - chr1_3:34361831-34361850 None:intergenic 20.0%
!! ATATCTGAACAATTAAATAC+TGG - chr1_3:34361832-34361851 None:intergenic 20.0%
!!! AATTAGGTTCTAATTCAATT+CGG - chr1_3:34361908-34361927 None:intergenic 20.0%
!!! TATCTAATTGAGCTTTTTTA+AGG + chr1_3:34362049-34362068 Msa0115490:intron 20.0%
!!! AAGTTTTATAGTTATTCAGT+AGG + chr1_3:34362104-34362123 Msa0115490:intron 20.0%
!! AAACAAATATTTCTTGTTCT+CGG - chr1_3:34362601-34362620 None:intergenic 20.0%
!!! ATTATTTTGGCTTTTGAAAA+TGG - chr1_3:34363060-34363079 None:intergenic 20.0%
!! ATGAATAAAAATGTGAAGAA+TGG + chr1_3:34363208-34363227 Msa0115490:intron 20.0%
!!! AGAAAATTCAATGTAAGTTT+TGG - chr1_3:34363263-34363282 None:intergenic 20.0%
!!! AGGTGATAAACAATTATTTT+TGG - chr1_3:34363357-34363376 None:intergenic 20.0%
!!! CTCTAGAATTTAATTTCATA+AGG - chr1_3:34363631-34363650 None:intergenic 20.0%
!!! AAGTGATTTTTTTTAATAGG+GGG - chr1_3:34364856-34364875 None:intergenic 20.0%
!!! GGAAAGTGATTTTTTTTAAT+AGG - chr1_3:34363777-34363796 None:intergenic 20.0%
!!! AGGAAGTGATTTTTTTTAAT+AGG + chr1_3:34364853-34364872 Msa0115490:intron 20.0%
!!! GGAAGTGATTTTTTTTAATA+GGG + chr1_3:34364854-34364873 Msa0115490:intron 20.0%
!!! GAAGTGATTTTTTTTAATAG+GGG + chr1_3:34364855-34364874 Msa0115490:intron 20.0%
!!! AAGTGATTTTTTTTAATAGG+GGG + chr1_3:34364856-34364875 Msa0115490:intron 20.0%
!! AGCCAAAAGAAATATAAATA+TGG - chr1_3:34365403-34365422 None:intergenic 20.0%
!! TCAGAAATCTATTAATGAAA+CGG - chr1_3:34365434-34365453 None:intergenic 20.0%
!! TTATAGAATCAAGAAGAAAT+AGG - chr1_3:34365646-34365665 None:intergenic 20.0%
!!! CTCATTATGTCTTTTAAAAT+TGG + chr1_3:34366145-34366164 Msa0115490:intron 20.0%
!!! ATTTTATAACTTGTAAGAGA+AGG + chr1_3:34366356-34366375 Msa0115490:intron 20.0%
!!! ATCTTTTACAAAAAAGACAA+CGG + chr1_3:34366411-34366430 Msa0115490:intron 20.0%
!! AAATATGGTCAAAATATGTT+AGG - chr1_3:34366560-34366579 None:intergenic 20.0%
!! AATATCATATAAGATGTTGT+TGG + chr1_3:34366604-34366623 Msa0115490:intron 20.0%
!!! AATCATGTTGAAATTTTTTC+GGG - chr1_3:34366979-34366998 None:intergenic 20.0%
!!! AATTTGTTTGTCTTTTAAAC+TGG + chr1_3:34367102-34367121 Msa0115490:intron 20.0%
!!! TAATTTTTATTCTCTCTGTA+AGG + chr1_3:34367448-34367467 Msa0115490:intron 20.0%
!!! TTTTAAACTTGTTTAGTGTT+TGG + chr1_3:34367841-34367860 Msa0115490:intron 20.0%
!!! TTTAAACTTGTTTAGTGTTT+GGG + chr1_3:34367842-34367861 Msa0115490:intron 20.0%
!! AGTTTATCAAATTTATTGCA+AGG + chr1_3:34367944-34367963 Msa0115490:intron 20.0%
!! GTATTTAGAAAAAAGATGTT+TGG + chr1_3:34368010-34368029 Msa0115490:intron 20.0%
!! GTTAACATTATAATATTCCA+AGG + chr1_3:34368032-34368051 Msa0115490:intron 20.0%
!!! GTTTAATAAATTTTATTCCC+GGG - chr1_3:34368177-34368196 None:intergenic 20.0%
!! ATTAAACTTGTAACAAACAT+AGG + chr1_3:34368190-34368209 Msa0115490:intron 20.0%
!!! AAGCCATTTTAAAAATTTCA+TGG - chr1_3:34368549-34368568 None:intergenic 20.0%
!!! TTTTGACCTGATATTTTTAA+TGG + chr1_3:34369020-34369039 Msa0115490:intron 20.0%
!!! AACTTTAGAGAGTAAAAAAA+TGG - chr1_3:34369049-34369068 None:intergenic 20.0%
!!! TTAAAAAGTATTTTTCAGCT+TGG + chr1_3:34369080-34369099 Msa0115490:three_prime_UTR 20.0%
! TAGCTTATAAAAACAGCTTA+AGG - chr1_3:34360717-34360736 None:intergenic 25.0%
!!! GCTGTTTTTATAAGCTATAT+TGG + chr1_3:34360720-34360739 Msa0115490:intron 25.0%
! ATATGTTTGAACTCAATGTA+TGG + chr1_3:34361028-34361047 Msa0115490:intron 25.0%
! ATATACACACTCACATAAAA+AGG + chr1_3:34361137-34361156 Msa0115490:intron 25.0%
!!! TATTTTGGATGAGAATATCA+AGG + chr1_3:34361448-34361467 Msa0115490:CDS 25.0%
! GTTAGATCATATCATTATCA+TGG + chr1_3:34361509-34361528 Msa0115490:intron 25.0%
!!! ATGCTACTAACTTGTTATTT+GGG - chr1_3:34361621-34361640 None:intergenic 25.0%
!!! TATGCTACTAACTTGTTATT+TGG - chr1_3:34361622-34361641 None:intergenic 25.0%
! AGTATATATTTCATCTCCTT+TGG - chr1_3:34361656-34361675 None:intergenic 25.0%
! TCTTTATATCTGGCTAAATT+AGG - chr1_3:34361924-34361943 None:intergenic 25.0%
!! ATTTTCAGCATCTTTATATC+TGG - chr1_3:34361934-34361953 None:intergenic 25.0%
!!! TTTCTGAAGTTGCTATTTTT+GGG - chr1_3:34362188-34362207 None:intergenic 25.0%
!!! TTTTCTGAAGTTGCTATTTT+TGG - chr1_3:34362189-34362208 None:intergenic 25.0%
!! GAAATATTTGTTTGTTGCAT+CGG + chr1_3:34362608-34362627 Msa0115490:CDS 25.0%
! GAGATCATTTCTTTATTAAG+CGG + chr1_3:34362742-34362761 Msa0115490:CDS 25.0%
! CAAGATTATGCTCAAAATAA+AGG - chr1_3:34362891-34362910 None:intergenic 25.0%
!! GAAACTTTTAATCCTCAAAA+AGG - chr1_3:34363089-34363108 None:intergenic 25.0%
! ATTCATGTGTTAACACTTTA+CGG - chr1_3:34363194-34363213 None:intergenic 25.0%
! TTTCTTTAGTGTGAAAATTC+AGG + chr1_3:34363278-34363297 Msa0115490:intron 25.0%
! ATATCATAGTCATAAACAGA+AGG - chr1_3:34363522-34363541 None:intergenic 25.0%
! TGTTTATGACTATGATATGA+AGG + chr1_3:34363524-34363543 Msa0115490:CDS 25.0%
! AATAAAACTATAAGGACTTG+TGG + chr1_3:34363667-34363686 Msa0115490:intron 25.0%
!! TTATGGCTTAAATGCATTTT+TGG + chr1_3:34363717-34363736 Msa0115490:intron 25.0%
!!! ACCACTGATTTTTAATCATA+AGG + chr1_3:34364708-34364727 Msa0115490:intron 25.0%
! CAAAGCATAGAATTCAAAAT+TGG - chr1_3:34365220-34365239 None:intergenic 25.0%
!! CAATTTTGAATTCTATGCTT+TGG + chr1_3:34365218-34365237 Msa0115490:intron 25.0%
!!! TCTATGCTTTGGTTTTATAT+TGG + chr1_3:34365229-34365248 Msa0115490:intron 25.0%
! TCAAGTAATAAACATTGATG+TGG - chr1_3:34365263-34365282 None:intergenic 25.0%
! TGAATACTTTCTTGTCTTAT+TGG + chr1_3:34365306-34365325 Msa0115490:intron 25.0%
! TTTGCTTGTCTAACAATTAA+AGG - chr1_3:34365470-34365489 None:intergenic 25.0%
! TGAAAAAAAATTCTGTTCCA+AGG + chr1_3:34365870-34365889 Msa0115490:CDS 25.0%
!! ATCATTTTCATATGTTGGTA+TGG - chr1_3:34366088-34366107 None:intergenic 25.0%
! AATACAAATTCATGCTGTTA+GGG - chr1_3:34366299-34366318 None:intergenic 25.0%
!! AAGATATTTTCCTTTCTTAC+AGG - chr1_3:34366396-34366415 None:intergenic 25.0%
! AAGATCAATTAAAACAAGAG+AGG - chr1_3:34366476-34366495 None:intergenic 25.0%
!! ATACTTTTAATGCATCAAGT+TGG - chr1_3:34367027-34367046 None:intergenic 25.0%
! TTTAAACTGGTATTAAGAAG+AGG + chr1_3:34367115-34367134 Msa0115490:intron 25.0%
! TAAAACTCACATACTTAACT+CGG - chr1_3:34367175-34367194 None:intergenic 25.0%
!! GATTTCTTTTGTGTTTCTTT+TGG + chr1_3:34367263-34367282 Msa0115490:intron 25.0%
! TTGTTCTTACATTATCAACA+GGG - chr1_3:34367373-34367392 None:intergenic 25.0%
! TTTGTTCTTACATTATCAAC+AGG - chr1_3:34367374-34367393 None:intergenic 25.0%
! TCGGACAAAAAATAAATATG+CGG - chr1_3:34367425-34367444 None:intergenic 25.0%
! GAGAGAATAAAAATTATGCT+CGG - chr1_3:34367444-34367463 None:intergenic 25.0%
! ACAAGTTTAAAAACAAACAG+CGG - chr1_3:34367833-34367852 None:intergenic 25.0%
!! TTAAACTTGTTTAGTGTTTG+GGG + chr1_3:34367843-34367862 Msa0115490:intron 25.0%
!!! TTGTTCTTTTGTTTTGGTTA+CGG + chr1_3:34367884-34367903 Msa0115490:intron 25.0%
! ATTCCTTAGAACATAAAGAT+GGG + chr1_3:34367973-34367992 Msa0115490:intron 25.0%
!!! CATCTTTTTTCTAAATACCT+TGG - chr1_3:34368008-34368027 None:intergenic 25.0%
!! TAATTTTATTCCCATCTTCA+TGG + chr1_3:34368092-34368111 Msa0115490:intron 25.0%
!! AATTTTATTCCCATCTTCAT+GGG + chr1_3:34368093-34368112 Msa0115490:intron 25.0%
!! TTTATTTCCACCATTTTCTT+TGG + chr1_3:34368119-34368138 Msa0115490:intron 25.0%
!! TTATTTCCACCATTTTCTTT+GGG + chr1_3:34368120-34368139 Msa0115490:intron 25.0%
!! AAAAGTTTTCCCAAAGAAAA+TGG - chr1_3:34368132-34368151 None:intergenic 25.0%
! AGTTATATTTGTAGATTCCT+GGG - chr1_3:34368240-34368259 None:intergenic 25.0%
! AAGTTATATTTGTAGATTCC+TGG - chr1_3:34368241-34368260 None:intergenic 25.0%
! TAGTACCTTCATTAAACTAA+GGG - chr1_3:34368276-34368295 None:intergenic 25.0%
! ATAGTACCTTCATTAAACTA+AGG - chr1_3:34368277-34368296 None:intergenic 25.0%
! AATAAATCACATTCTACACT+TGG - chr1_3:34368331-34368350 None:intergenic 25.0%
! ATTTATTAGTGAGCAAGTTA+TGG + chr1_3:34368344-34368363 Msa0115490:intron 25.0%
!! GTCTTTAAAAAGGAAAGTAA+AGG - chr1_3:34368574-34368593 None:intergenic 25.0%
!! CAACGAATTTGTCTTTAAAA+AGG - chr1_3:34368584-34368603 None:intergenic 25.0%
!! CATTTTACTCATTGAGTATA+TGG + chr1_3:34368970-34368989 Msa0115490:three_prime_UTR 25.0%
! TTGAGAAAAAGATAAAGTAG+AGG + chr1_3:34369111-34369130 Msa0115490:three_prime_UTR 25.0%
TGGTAGAATGAATGATGATA+CGG - chr1_3:34359872-34359891 None:intergenic 30.0%
TTCAGAAATGCATTATGACA+TGG - chr1_3:34359892-34359911 None:intergenic 30.0%
TTAGAATCGATAACTACTAC+TGG + chr1_3:34360230-34360249 Msa0115490:CDS 30.0%
ATTATTGATACCTGACATGA+CGG - chr1_3:34360326-34360345 None:intergenic 30.0%
!! AACTTGTTATAAGCTGCTTA+TGG + chr1_3:34360478-34360497 Msa0115490:intron 30.0%
! CATATGTCATAAGCTGATTT+CGG - chr1_3:34360511-34360530 None:intergenic 30.0%
AAGCTATATTGGAGAACTTA+TGG + chr1_3:34360731-34360750 Msa0115490:intron 30.0%
! TTAGGTTATTTGAGACAGTT+TGG - chr1_3:34360847-34360866 None:intergenic 30.0%
TCAAATAACCTAATCCAAAC+AGG + chr1_3:34360854-34360873 Msa0115490:intron 30.0%
TGAAAACAGCTTATGACATA+AGG - chr1_3:34360880-34360899 None:intergenic 30.0%
TCAAAAAAGTCAATCCAAAG+AGG + chr1_3:34360947-34360966 Msa0115490:intron 30.0%
AATGTCATATTGAACCTCTT+TGG - chr1_3:34360964-34360983 None:intergenic 30.0%
! AAGCTTTTTGCTGAGATAAA+AGG + chr1_3:34361245-34361264 Msa0115490:CDS 30.0%
! TTTTTGCTGAGATAAAAGGA+AGG + chr1_3:34361249-34361268 Msa0115490:CDS 30.0%
TGAGATAAAAGGAAGGATAA+AGG + chr1_3:34361256-34361275 Msa0115490:CDS 30.0%
GATAAAGGAGGAAGATATAT+CGG + chr1_3:34361271-34361290 Msa0115490:CDS 30.0%
TAAGAAAACATTGGAAGGAA+AGG + chr1_3:34361325-34361344 Msa0115490:CDS 30.0%
!! CCTTTTGGTTATCAGATATA+AGG - chr1_3:34361373-34361392 None:intergenic 30.0%
CCTTATATCTGATAACCAAA+AGG + chr1_3:34361370-34361389 Msa0115490:CDS 30.0%
TGTAACATCAAACCTTGAAT+GGG + chr1_3:34361729-34361748 Msa0115490:CDS 30.0%
! TGCTCTAGTTTATGTAACAA+TGG + chr1_3:34361762-34361781 Msa0115490:CDS 30.0%
TAATATTCTTAGACCTGACA+AGG + chr1_3:34361786-34361805 Msa0115490:CDS 30.0%
! CAATTAAATACTGGGTTGAA+AGG - chr1_3:34361823-34361842 None:intergenic 30.0%
TTCAGATATAATCAGCACTT+GGG + chr1_3:34361843-34361862 Msa0115490:intron 30.0%
CTGAAAATTAGATGAGATTG+TGG + chr1_3:34361946-34361965 Msa0115490:intron 30.0%
! TTTTCTGCTTAATTCAAAGC+CGG + chr1_3:34362007-34362026 Msa0115490:intron 30.0%
!! ATGATAATGGTTTAGAAGTG+AGG - chr1_3:34362382-34362401 None:intergenic 30.0%
CTAAAACTTAAATACACGTG+AGG - chr1_3:34362408-34362427 None:intergenic 30.0%
! GTTTAGTATTTTGCTGCATA+TGG + chr1_3:34362431-34362450 Msa0115490:intron 30.0%
AAAAGATACTTGTCTTTACG+AGG + chr1_3:34362539-34362558 Msa0115490:CDS 30.0%
!! AAAACTTTAAGACCTTCTTC+AGG - chr1_3:34362678-34362697 None:intergenic 30.0%
AATAAGAACTGTAGTTGAAG+AGG - chr1_3:34362820-34362839 None:intergenic 30.0%
! TGCTTTCCAAAATGTTGTTT+AGG + chr1_3:34362997-34363016 Msa0115490:intron 30.0%
! AGTTCTCCTAAACAACATTT+TGG - chr1_3:34363006-34363025 None:intergenic 30.0%
ACACTTTACGGAAATAATCA+AGG - chr1_3:34363182-34363201 None:intergenic 30.0%
TATTGATCCAGTATACTATG+TGG + chr1_3:34363431-34363450 Msa0115490:CDS 30.0%
!!! AGTTTTGAAGAAGATTGACT+CGG + chr1_3:34363557-34363576 Msa0115490:CDS 30.0%
TGATGTAAAATTGAACAGCT+TGG - chr1_3:34363606-34363625 None:intergenic 30.0%
! AAGCTGTTCAATTTTACATC+AGG + chr1_3:34363605-34363624 Msa0115490:intron 30.0%
TTAAATAATAGCCTTTGACC+AGG - chr1_3:34363852-34363871 None:intergenic 30.0%
! TAGTCTTAGGATTAAATCAG+TGG + chr1_3:34363909-34363928 Msa0115490:intron 30.0%
AGAAATGGAGTTTATTAGGA+AGG - chr1_3:34363972-34363991 None:intergenic 30.0%
AAGGAGAAATGGAGTTTATT+AGG - chr1_3:34363976-34363995 None:intergenic 30.0%
TATGATGAAACAGAGAATGA+AGG + chr1_3:34364526-34364545 Msa0115490:intron 30.0%
AGAAAGAATGAGAAAGTGAA+TGG + chr1_3:34364635-34364654 Msa0115490:intron 30.0%
GCCTTATGATTAAAAATCAG+TGG - chr1_3:34364712-34364731 None:intergenic 30.0%
CAATAGGAGACAAATAATAC+AGG - chr1_3:34364988-34365007 None:intergenic 30.0%
TCAGATCCATTACTACTTTA+TGG + chr1_3:34365135-34365154 Msa0115490:CDS 30.0%
! TTCTTGTCTTATTGGAACAA+AGG + chr1_3:34365314-34365333 Msa0115490:intron 30.0%
ATATGGATGTTCATGAACAA+AGG - chr1_3:34365386-34365405 None:intergenic 30.0%
ATATATTTATGTTCCCTCTG+TGG + chr1_3:34365513-34365532 Msa0115490:intron 30.0%
TATGTTATAGCTCATATACG+CGG + chr1_3:34365751-34365770 Msa0115490:CDS 30.0%
ATTTATGCAAAGTCTTTCCT+TGG - chr1_3:34365890-34365909 None:intergenic 30.0%
AAGGAAAGACTTTGCATAAA+TGG + chr1_3:34365889-34365908 Msa0115490:CDS 30.0%
AAAGAAATTTACCTCCCATT+CGG - chr1_3:34366049-34366068 None:intergenic 30.0%
TTTCATATGTTGGTATGGAA+TGG - chr1_3:34366083-34366102 None:intergenic 30.0%
TAAAGTCAAACAGAAACATC+TGG - chr1_3:34366124-34366143 None:intergenic 30.0%
! TGTCTTTTATGATTGCCTTT+AGG + chr1_3:34366195-34366214 Msa0115490:intron 30.0%
! TGTTTTCTTATGCTTCCTAA+AGG - chr1_3:34366213-34366232 None:intergenic 30.0%
ATACAAATTCATGCTGTTAG+GGG - chr1_3:34366298-34366317 None:intergenic 30.0%
CAATACAAATTCATGCTGTT+AGG - chr1_3:34366300-34366319 None:intergenic 30.0%
GTAAGAGAAGGAAAATATGT+TGG + chr1_3:34366368-34366387 Msa0115490:intron 30.0%
ATCAATTAAAACAAGAGAGG+AGG - chr1_3:34366473-34366492 None:intergenic 30.0%
!! TCAACTGTGTCACTTAATAT+GGG + chr1_3:34366733-34366752 Msa0115490:intron 30.0%
!!! TTTTTTTTCTCTCATGACAC+TGG + chr1_3:34366768-34366787 Msa0115490:intron 30.0%
TAGCTGTGATTTCTTCTAAA+TGG - chr1_3:34366824-34366843 None:intergenic 30.0%
!!! TTTTTTCGGGAAATGAGAAA+TGG - chr1_3:34366966-34366985 None:intergenic 30.0%
CATTTGCTTGTTTACTTTCA+TGG - chr1_3:34367055-34367074 None:intergenic 30.0%
AAGTAAACAAGCAAATGTGT+CGG + chr1_3:34367058-34367077 Msa0115490:intron 30.0%
! ATGAAATTCAAGAGCTTTGA+TGG - chr1_3:34367209-34367228 None:intergenic 30.0%
TTATTTCCTTCTGTTACTGT+AGG + chr1_3:34367295-34367314 Msa0115490:intron 30.0%
TGTTCTTACATTATCAACAG+GGG - chr1_3:34367372-34367391 None:intergenic 30.0%
AGAACAAATACTGCACTTAA+TGG + chr1_3:34367386-34367405 Msa0115490:intron 30.0%
TTTATTCTCTCTGTAAGGAA+TGG + chr1_3:34367453-34367472 Msa0115490:intron 30.0%
!! ACGACTTTGTTCTTTTGTTT+TGG + chr1_3:34367878-34367897 Msa0115490:intron 30.0%
CATTCCTTAGAACATAAAGA+TGG + chr1_3:34367972-34367991 Msa0115490:intron 30.0%
ATTCCCATCTTTATGTTCTA+AGG - chr1_3:34367979-34367998 None:intergenic 30.0%
! AAGATGGGAATTTTATTCCA+AGG + chr1_3:34367988-34368007 Msa0115490:intron 30.0%
TTCCAAGGAACCTTAAAAAT+AGG + chr1_3:34368047-34368066 Msa0115490:intron 30.0%
TCCAAGGAACCTTAAAAATA+GGG + chr1_3:34368048-34368067 Msa0115490:intron 30.0%
AATAAAGTTCCCATGAAGAT+GGG - chr1_3:34368105-34368124 None:intergenic 30.0%
AAATAAAGTTCCCATGAAGA+TGG - chr1_3:34368106-34368125 None:intergenic 30.0%
! GTTTTTATGATTTTATGCCC+AGG + chr1_3:34368220-34368239 Msa0115490:intron 30.0%
!! AGTTTAATGAAGGTACTATG+TGG + chr1_3:34368278-34368297 Msa0115490:intron 30.0%
AGTTCTACATTTAAACTCCT+AGG - chr1_3:34368452-34368471 None:intergenic 30.0%
ATGTAGATTTGAGAAACTTC+AGG + chr1_3:34368677-34368696 Msa0115490:intron 30.0%
TAGGAAGAATGTATAAGTGA+AGG - chr1_3:34368709-34368728 None:intergenic 30.0%
! TAGTCATGTTTAGAGTCTTT+AGG - chr1_3:34368728-34368747 None:intergenic 30.0%
TGACTAATCATCTTTAGTCT+TGG + chr1_3:34368742-34368761 Msa0115490:exon 30.0%
! GACTAATCATCTTTAGTCTT+GGG + chr1_3:34368743-34368762 Msa0115490:exon 30.0%
! GGTAATTTCAGATTTTCTCT+AGG - chr1_3:34368925-34368944 None:intergenic 30.0%
GCTAAACATATTTGCAAACA+AGG - chr1_3:34368946-34368965 None:intergenic 30.0%
CATTGAGTATATGGCAATAA+AGG + chr1_3:34368979-34368998 Msa0115490:three_prime_UTR 30.0%
TGGATGCCATTAAAAATATC+AGG - chr1_3:34369029-34369048 None:intergenic 30.0%
AAAAAGGAAGAGAAAGAGTG+AGG - chr1_3:34360075-34360094 None:intergenic 35.0%
! ATCATTTTCTTGACGGAGAT+AGG - chr1_3:34360293-34360312 None:intergenic 35.0%
! CGGTGTAATCATTTTCTTGA+CGG - chr1_3:34360300-34360319 None:intergenic 35.0%
AAGCTTTCCAAGATAGCTTA+TGG - chr1_3:34360540-34360559 None:intergenic 35.0%
ACGAAAACAGCCTATGAAAT+GGG + chr1_3:34360571-34360590 Msa0115490:intron 35.0%
AACTCAATGTATGGACACTA+TGG + chr1_3:34361037-34361056 Msa0115490:intron 35.0%
! AGAGTGTTCATTGTGCAAAT+GGG + chr1_3:34361060-34361079 Msa0115490:intron 35.0%
TTCATTGTGCAAATGGGTAA+AGG + chr1_3:34361066-34361085 Msa0115490:intron 35.0%
GTGAGTGTGTATATAGCAAT+CGG - chr1_3:34361131-34361150 None:intergenic 35.0%
GATAAAAGGAAGGATAAAGG+AGG + chr1_3:34361259-34361278 Msa0115490:CDS 35.0%
! CATTAACAGATGGAACCTTT+TGG - chr1_3:34361388-34361407 None:intergenic 35.0%
TCATCCAAAATAACATGCTC+CGG - chr1_3:34361440-34361459 None:intergenic 35.0%
CAGCACAAATACTACAGTAT+CGG + chr1_3:34361476-34361495 Msa0115490:CDS 35.0%
!!! CTACAGTATCGGTACTTTTA+AGG + chr1_3:34361487-34361506 Msa0115490:CDS 35.0%
TTTGATGTTACACTGACAAG+AGG - chr1_3:34361721-34361740 None:intergenic 35.0%
GTGTAACATCAAACCTTGAA+TGG + chr1_3:34361728-34361747 Msa0115490:CDS 35.0%
! TTAAATACTGGGTTGAAAGG+AGG - chr1_3:34361820-34361839 None:intergenic 35.0%
GTTCAGATATAATCAGCACT+TGG + chr1_3:34361842-34361861 Msa0115490:intron 35.0%
AAGCAGAAAACATCCAGTTT+CGG - chr1_3:34361997-34362016 None:intergenic 35.0%
ATCAGTCAGAAACTTATGTC+CGG - chr1_3:34362029-34362048 None:intergenic 35.0%
GCAACTTCAGAAAAGAATGA+AGG + chr1_3:34362195-34362214 Msa0115490:intron 35.0%
TACCATGTTGAAACAAGACA+AGG - chr1_3:34362281-34362300 None:intergenic 35.0%
ACACGTGAGGTAAATGATAA+TGG - chr1_3:34362395-34362414 None:intergenic 35.0%
CATCGGAAAGTAAAACTACA+AGG + chr1_3:34362625-34362644 Msa0115490:CDS 35.0%
!! TAAAGTTTTGACACAACGTG+TGG + chr1_3:34362689-34362708 Msa0115490:CDS 35.0%
TAAAGAAATGATCTCCACGA+TGG - chr1_3:34362737-34362756 None:intergenic 35.0%
AATTATAATGACAGCGTGCT+TGG + chr1_3:34362915-34362934 Msa0115490:intron 35.0%
GTTCACTGTATAAACTGTGT+TGG - chr1_3:34363117-34363136 None:intergenic 35.0%
GTTGCATATGAGAGAGAAAA+TGG + chr1_3:34363327-34363346 Msa0115490:CDS 35.0%
GAAGAATCCACATAGTATAC+TGG - chr1_3:34363441-34363460 None:intergenic 35.0%
TCATAGTCATAAACAGAAGG+AGG - chr1_3:34363519-34363538 None:intergenic 35.0%
TATGACTATGATATGAAGGC+TGG + chr1_3:34363528-34363547 Msa0115490:CDS 35.0%
TTGCTACCATGGCAAATATA+GGG - chr1_3:34363745-34363764 None:intergenic 35.0%
ATTGCTACCATGGCAAATAT+AGG - chr1_3:34363746-34363765 None:intergenic 35.0%
! ATTTGCCATGGTAGCAATTT+TGG + chr1_3:34363748-34363767 Msa0115490:intron 35.0%
GAAGAAAAGAGAAGGAGAAA+TGG - chr1_3:34363987-34364006 None:intergenic 35.0%
TTCAGAAAAATTGCAGCCAA+TGG - chr1_3:34364060-34364079 None:intergenic 35.0%
AAGAATGAGAAAGTGAATGG+AGG + chr1_3:34364638-34364657 Msa0115490:intron 35.0%
!! TTTGATTTTGACCTGGTCAA+AGG - chr1_3:34364792-34364811 None:intergenic 35.0%
TTTGACCAGGTCAAAATCAA+AGG + chr1_3:34364791-34364810 Msa0115490:intron 35.0%
TTGACCAGGTCAAAATCAAA+GGG + chr1_3:34364792-34364811 Msa0115490:intron 35.0%
! GTTTGCCATTGTAGCAATTT+TGG - chr1_3:34364882-34364901 None:intergenic 35.0%
TTGCTACAATGGCAAACATA+AGG + chr1_3:34364885-34364904 Msa0115490:intron 35.0%
TGCTACAATGGCAAACATAA+GGG + chr1_3:34364886-34364905 Msa0115490:intron 35.0%
GAGCAATTGAACAAAACTCA+AGG - chr1_3:34364959-34364978 None:intergenic 35.0%
ATTTGTCTCCTATTGTTCTC+AGG + chr1_3:34364993-34365012 Msa0115490:intron 35.0%
CAACAAAATACGTCACTGAA+AGG + chr1_3:34365034-34365053 Msa0115490:CDS 35.0%
TTTCGGTATACAAGTGACAT+GGG - chr1_3:34365093-34365112 None:intergenic 35.0%
! TTTTCGGTATACAAGTGACA+TGG - chr1_3:34365094-34365113 None:intergenic 35.0%
CCATTACTACTTTATGGCTA+CGG + chr1_3:34365141-34365160 Msa0115490:CDS 35.0%
CATTACTACTTTATGGCTAC+GGG + chr1_3:34365142-34365161 Msa0115490:CDS 35.0%
CATCTTGCATACAACAAAAC+AGG - chr1_3:34365363-34365382 None:intergenic 35.0%
AATTGTTAGACAAGCAAAGC+TGG + chr1_3:34365472-34365491 Msa0115490:intron 35.0%
TGGAGTTCTTAATATGAGAC+CGG + chr1_3:34365939-34365958 Msa0115490:CDS 35.0%
TATGAGACCGGATTTATTCA+AGG + chr1_3:34365951-34365970 Msa0115490:CDS 35.0%
AATATCAGCCAATGCATCTT+TGG - chr1_3:34366260-34366279 None:intergenic 35.0%
TATGTTGGAACCTGTAAGAA+AGG + chr1_3:34366383-34366402 Msa0115490:intron 35.0%
!! AGTGCTTCTGTTTGATTTTC+TGG + chr1_3:34366435-34366454 Msa0115490:intron 35.0%
CTAAGTCATCTCATATGGAA+CGG - chr1_3:34366517-34366536 None:intergenic 35.0%
GTCAACTAAGTCATCTCATA+TGG - chr1_3:34366522-34366541 None:intergenic 35.0%
!! GTCAACTGTGTCACTTAATA+TGG + chr1_3:34366732-34366751 Msa0115490:intron 35.0%
! CACATAATTTTGTGCACTAC+TGG + chr1_3:34366920-34366939 Msa0115490:intron 35.0%
! TAATTTTGTGCACTACTGGT+TGG + chr1_3:34366924-34366943 Msa0115490:intron 35.0%
AGCTACTATTTGTAGCTTCA+TGG - chr1_3:34367003-34367022 None:intergenic 35.0%
TAACTCGGAAGGAATATAAG+CGG - chr1_3:34367160-34367179 None:intergenic 35.0%
CAACTCCACATAATATCGTA+TGG + chr1_3:34367237-34367256 Msa0115490:intron 35.0%
TCACTCCATACGATATTATG+TGG - chr1_3:34367245-34367264 None:intergenic 35.0%
AAATATGCGGTGAAAGTTAG+AGG - chr1_3:34367412-34367431 None:intergenic 35.0%
! TTCTATTTCTCGTTCTATGC+AGG + chr1_3:34367505-34367524 Msa0115490:intron 35.0%
CAGCTGTAACAAGAATATGT+GGG - chr1_3:34367547-34367566 None:intergenic 35.0%
CTTGTTACAGCTGGATTAAA+TGG + chr1_3:34367554-34367573 Msa0115490:CDS 35.0%
AAAGTTCGTGGCAAAATTGA+GGG + chr1_3:34367719-34367738 Msa0115490:CDS 35.0%
! CTGTTGTTTAAATGTGAGCT+TGG + chr1_3:34367765-34367784 Msa0115490:CDS 35.0%
!!! TTCTTTTGTTTTGGTTACGG+TGG + chr1_3:34367887-34367906 Msa0115490:intron 35.0%
!!! TCTTTTGTTTTGGTTACGGT+GGG + chr1_3:34367888-34367907 Msa0115490:intron 35.0%
!!! TCCCTATTTTTAAGGTTCCT+TGG - chr1_3:34368052-34368071 None:intergenic 35.0%
! AGTTTTCCCAAAGAAAATGG+TGG - chr1_3:34368129-34368148 None:intergenic 35.0%
ACACACCCTTAGTTTAATGA+AGG + chr1_3:34368268-34368287 Msa0115490:intron 35.0%
CATCAAGTATCTCACATCAT+AGG - chr1_3:34368865-34368884 None:intergenic 35.0%
CTATGATGTGAGATACTTGA+TGG + chr1_3:34368863-34368882 Msa0115490:three_prime_UTR 35.0%
! ATGTGAGATACTTGATGGTA+TGG + chr1_3:34368868-34368887 Msa0115490:three_prime_UTR 35.0%
GTTACATTGCCATCAATTTC+AGG + chr1_3:34368894-34368913 Msa0115490:three_prime_UTR 35.0%
TAGGAAAGTCCTGAAATTGA+TGG - chr1_3:34368906-34368925 None:intergenic 35.0%
AAAAGCAGTGAAAGCGAAAG+AGG - chr1_3:34360367-34360386 None:intergenic 40.0%
GACACTGTGAATGAAGCTTA+TGG + chr1_3:34360428-34360447 Msa0115490:intron 40.0%
GAACTTGCCATAAGCTATCT+TGG + chr1_3:34360530-34360549 Msa0115490:intron 40.0%
GACGAAAACAGCCTATGAAA+TGG + chr1_3:34360570-34360589 Msa0115490:intron 40.0%
TCCAAACAGACCCATTTCAT+AGG - chr1_3:34360584-34360603 None:intergenic 40.0%
GCTGTTCTGTGAGATTGTTT+GGG - chr1_3:34360811-34360830 None:intergenic 40.0%
AGCTGTTCTGTGAGATTGTT+TGG - chr1_3:34360812-34360831 None:intergenic 40.0%
ACATAAGGCCTGTTTGGATT+AGG - chr1_3:34360865-34360884 None:intergenic 40.0%
CTTATGACATAAGGCCTGTT+TGG - chr1_3:34360871-34360890 None:intergenic 40.0%
!! GAGAGTGTTCATTGTGCAAA+TGG + chr1_3:34361059-34361078 Msa0115490:intron 40.0%
TATTCTTAGACCTGACAAGG+TGG + chr1_3:34361789-34361808 Msa0115490:intron 40.0%
ATTCTTAGACCTGACAAGGT+GGG + chr1_3:34361790-34361809 Msa0115490:intron 40.0%
!! CACCTTGTCTTGTTTCAACA+TGG + chr1_3:34362276-34362295 Msa0115490:intron 40.0%
GGCGAAAAACACAAGGAAAT+TGG - chr1_3:34362361-34362380 None:intergenic 40.0%
! TTTAAGACCTTCTTCAGGCT+TGG - chr1_3:34362673-34362692 None:intergenic 40.0%
TTCTTATTCCCCACAGAGAA+AGG + chr1_3:34362832-34362851 Msa0115490:CDS 40.0%
TTTGCGTTACCTTTCTCTGT+GGG - chr1_3:34362844-34362863 None:intergenic 40.0%
ATTTGCGTTACCTTTCTCTG+TGG - chr1_3:34362845-34362864 None:intergenic 40.0%
GTTTATCACCTTCCATCTGT+TGG + chr1_3:34363366-34363385 Msa0115490:CDS 40.0%
CCACTTTCAAGACTTCTTAG+CGG - chr1_3:34363396-34363415 None:intergenic 40.0%
AAGAAGTCTTGAAAGTGGTC+AGG + chr1_3:34363398-34363417 Msa0115490:CDS 40.0%
TGCTACCATGGCAAATATAG+GGG - chr1_3:34363744-34363763 None:intergenic 40.0%
TTGACCAGGTCAAAATCAGA+GGG - chr1_3:34363838-34363857 None:intergenic 40.0%
TTTGACCAGGTCAAAATCAG+AGG - chr1_3:34363839-34363858 None:intergenic 40.0%
!! TCTGATTTTGACCTGGTCAA+AGG + chr1_3:34363838-34363857 Msa0115490:intron 40.0%
!! TGGTGGTAATGGATTTGACT+AGG - chr1_3:34364037-34364056 None:intergenic 40.0%
AAATCCATTACCACCACCAT+TGG + chr1_3:34364041-34364060 Msa0115490:intron 40.0%
AGAAAAATTGCAGCCAATGG+TGG - chr1_3:34364057-34364076 None:intergenic 40.0%
ATTGAATTGTTCCCAGCAAG+TGG - chr1_3:34364140-34364159 None:intergenic 40.0%
GATGTCTTTGATGTTGTCGT+TGG + chr1_3:34364348-34364367 Msa0115490:intron 40.0%
GTAAGTGTGCAGTTATGTGT+GGG + chr1_3:34364409-34364428 Msa0115490:intron 40.0%
! TGCAGTTATGTGTGGGTTTT+GGG + chr1_3:34364416-34364435 Msa0115490:intron 40.0%
!!! TTTTGGGGCGTTAAAAAGGA+GGG + chr1_3:34364432-34364451 Msa0115490:intron 40.0%
AAAAGGAGGGTGGAAAATGA+AGG + chr1_3:34364445-34364464 Msa0115490:intron 40.0%
GATGAAACAGAGAATGAAGG+AGG + chr1_3:34364529-34364548 Msa0115490:intron 40.0%
!! TTCTGGTGTTGTTCTTGTTC+TGG + chr1_3:34364612-34364631 Msa0115490:intron 40.0%
ATGAGAAAGTGAATGGAGGA+TGG + chr1_3:34364642-34364661 Msa0115490:intron 40.0%
TGACCAGGTCAAAATCAAAG+GGG + chr1_3:34364793-34364812 Msa0115490:intron 40.0%
GCTACAATGGCAAACATAAG+GGG + chr1_3:34364887-34364906 Msa0115490:intron 40.0%
TCCTATTGTTCTCAGGTTCT+CGG + chr1_3:34365000-34365019 Msa0115490:intron 40.0%
! CGAGCTTCACAAGATCTTTT+CGG - chr1_3:34365110-34365129 None:intergenic 40.0%
AAAGATCTTGTGAAGCTCGA+TGG + chr1_3:34365111-34365130 Msa0115490:CDS 40.0%
CCGTAGCCATAAAGTAGTAA+TGG - chr1_3:34365144-34365163 None:intergenic 40.0%
TATGTTCCCTCTGTGGTATA+TGG + chr1_3:34365520-34365539 Msa0115490:intron 40.0%
ATGTTCCCTCTGTGGTATAT+GGG + chr1_3:34365521-34365540 Msa0115490:intron 40.0%
AACTTCTGCAACCAAAGGAA+CGG - chr1_3:34365565-34365584 None:intergenic 40.0%
TGCAAAACTTCTGCAACCAA+AGG - chr1_3:34365570-34365589 None:intergenic 40.0%
! ATCCCAGTTTCAAGTCATCA+AGG + chr1_3:34365701-34365720 Msa0115490:CDS 40.0%
! AGCCTTGATGACTTGAAACT+GGG - chr1_3:34365706-34365725 None:intergenic 40.0%
! AAGCCTTGATGACTTGAAAC+TGG - chr1_3:34365707-34365726 None:intergenic 40.0%
AGGCTTTCATTGTTAGATCG+AGG + chr1_3:34365721-34365740 Msa0115490:CDS 40.0%
ACAGCAGCCTTGAATAAATC+CGG - chr1_3:34365961-34365980 None:intergenic 40.0%
!! AACATCCACAAAAGGTACTC+CGG - chr1_3:34365986-34366005 None:intergenic 40.0%
GTTGTCACAACATCCACAAA+AGG - chr1_3:34365994-34366013 None:intergenic 40.0%
GAAGTAGTGAGAGGAATAGT+TGG - chr1_3:34366027-34366046 None:intergenic 40.0%
!! CTGTTAGGGGAGTATTCATT+TGG - chr1_3:34366285-34366304 None:intergenic 40.0%
!! CTGTGTCACTTAATATGGGA+CGG + chr1_3:34366737-34366756 Msa0115490:intron 40.0%
AATACAGCAGTAACATGCCA+GGG - chr1_3:34366850-34366869 None:intergenic 40.0%
TAATACAGCAGTAACATGCC+AGG - chr1_3:34366851-34366870 None:intergenic 40.0%
ACTCACATACTTAACTCGGA+AGG - chr1_3:34367171-34367190 None:intergenic 40.0%
TCCTTCTGTTACTGTAGGAA+TGG + chr1_3:34367300-34367319 Msa0115490:intron 40.0%
CCTTCTGTTACTGTAGGAAT+GGG + chr1_3:34367301-34367320 Msa0115490:intron 40.0%
CTTCTGTTACTGTAGGAATG+GGG + chr1_3:34367302-34367321 Msa0115490:intron 40.0%
AAGTAGAATTCCTCCTTCCT+AGG - chr1_3:34367332-34367351 None:intergenic 40.0%
CTCTGTAAGGAATGGTTACT+AGG + chr1_3:34367461-34367480 Msa0115490:intron 40.0%
CCAGCTGTAACAAGAATATG+TGG - chr1_3:34367548-34367567 None:intergenic 40.0%
CCACATATTCTTGTTACAGC+TGG + chr1_3:34367545-34367564 Msa0115490:CDS 40.0%
TGGTAAGCATACCTGATTCT+TGG + chr1_3:34367574-34367593 Msa0115490:intron 40.0%
GTTCAGAATACAGAACACGT+GGG - chr1_3:34367695-34367714 None:intergenic 40.0%
! AATTTTGCCACGAACTTTGC+AGG - chr1_3:34367717-34367736 None:intergenic 40.0%
CAAAGTTCGTGGCAAAATTG+AGG + chr1_3:34367718-34367737 Msa0115490:CDS 40.0%
!! TTTAAATGTGAGCTTGGTGC+TGG + chr1_3:34367771-34367790 Msa0115490:CDS 40.0%
!! TGCTGGACATTTTTCGAAGT+CGG + chr1_3:34367788-34367807 Msa0115490:CDS 40.0%
! TGGGAGAAATGGGAAGTTTT+AGG + chr1_3:34367907-34367926 Msa0115490:intron 40.0%
! GGGAGAAATGGGAAGTTTTA+GGG + chr1_3:34367908-34367927 Msa0115490:intron 40.0%
! GGGAAAACTTTTCTATTCCC+AGG + chr1_3:34368140-34368159 Msa0115490:intron 40.0%
! TCCCAGGAACATTTTATACC+CGG + chr1_3:34368156-34368175 Msa0115490:intron 40.0%
!! CTAGGAAGCATCTTAGAAGA+TGG - chr1_3:34368434-34368453 None:intergenic 40.0%
!! CATCTTCTAAGATGCTTCCT+AGG + chr1_3:34368432-34368451 Msa0115490:intron 40.0%
CTGTGAAGAGATGGAATGAT+TGG + chr1_3:34368784-34368803 Msa0115490:three_prime_UTR 40.0%
!! TGCTGGTTTCACTTAAGCTA+TGG - chr1_3:34368815-34368834 None:intergenic 40.0%
AGGCTTAGAAGTTAGAACCA+GGG - chr1_3:34368845-34368864 None:intergenic 40.0%
TAGGCTTAGAAGTTAGAACC+AGG - chr1_3:34368846-34368865 None:intergenic 40.0%
TCAAAACAAGCACAAAGCGT+GGG - chr1_3:34369006-34369025 None:intergenic 40.0%
AGGAAGAGAAAGAGTGAGGA+CGG - chr1_3:34360071-34360090 None:intergenic 45.0%
TGAGACTGTGACAGAGATTG+CGG - chr1_3:34360148-34360167 None:intergenic 45.0%
GAAGAAGGTCGAGCACAAAA+TGG + chr1_3:34360192-34360211 Msa0115490:CDS 45.0%
! ATAGGAAAGCACATCGGGAT+CGG - chr1_3:34360275-34360294 None:intergenic 45.0%
! ACGGAGATAGGAAAGCACAT+CGG - chr1_3:34360281-34360300 None:intergenic 45.0%
! GATACCTGACATGACGGAAT+CGG - chr1_3:34360320-34360339 None:intergenic 45.0%
GCCTATGAAATGGGTCTGTT+TGG + chr1_3:34360580-34360599 Msa0115490:intron 45.0%
GTTCTCTTAAACAGTGTCGC+AGG + chr1_3:34360903-34360922 Msa0115490:intron 45.0%
AACAGTGTAACGTGCTGAGT+AGG + chr1_3:34361101-34361120 Msa0115490:intron 45.0%
TAATAAGGCCCTTTGCGTAC+GGG - chr1_3:34361299-34361318 None:intergenic 45.0%
GTAATAAGGCCCTTTGCGTA+CGG - chr1_3:34361300-34361319 None:intergenic 45.0%
!! GGCATGGTGTCATTAACAGA+TGG - chr1_3:34361398-34361417 None:intergenic 45.0%
GTTAATGACACCATGCCTAC+AGG + chr1_3:34361401-34361420 Msa0115490:CDS 45.0%
!! TCCTCCGGAGCATGTTATTT+TGG + chr1_3:34361433-34361452 Msa0115490:CDS 45.0%
TCCAAAATAACATGCTCCGG+AGG - chr1_3:34361437-34361456 None:intergenic 45.0%
GCATATGCAGAAGACACCAA+AGG + chr1_3:34361637-34361656 Msa0115490:CDS 45.0%
ATCGAGACTCAAGCTCCAAT+TGG + chr1_3:34361691-34361710 Msa0115490:CDS 45.0%
ACATCAAACCTTGAATGGGC+TGG + chr1_3:34361733-34361752 Msa0115490:CDS 45.0%
TTTCAATCTGCAGCCGAAAC+TGG + chr1_3:34361981-34362000 Msa0115490:intron 45.0%
GAAGTGAGGCGAAAAACACA+AGG - chr1_3:34362368-34362387 None:intergenic 45.0%
GCTAACGCCTTAAGTGATAC+AGG + chr1_3:34362485-34362504 Msa0115490:intron 45.0%
AGCCATGCCTGTATCACTTA+AGG - chr1_3:34362495-34362514 None:intergenic 45.0%
TCTTGTTCTCGGAAGCTTCA+AGG - chr1_3:34362590-34362609 None:intergenic 45.0%
GATGTTTCCAAGCCTGAAGA+AGG + chr1_3:34362663-34362682 Msa0115490:CDS 45.0%
!! GTTTTGACACAACGTGTGGA+TGG + chr1_3:34362693-34362712 Msa0115490:CDS 45.0%
TTGCGTTACCTTTCTCTGTG+GGG - chr1_3:34362843-34362862 None:intergenic 45.0%
!! CGTGCTTGGCTTTTGAATGT+GGG + chr1_3:34362929-34362948 Msa0115490:intron 45.0%
!! GTGCTTGGCTTTTGAATGTG+GGG + chr1_3:34362930-34362949 Msa0115490:intron 45.0%
! CTTTTGAATGTGGGGTCACT+GGG + chr1_3:34362938-34362957 Msa0115490:intron 45.0%
CCGCTAAGAAGTCTTGAAAG+TGG + chr1_3:34363393-34363412 Msa0115490:CDS 45.0%
AAGTCTTGAAAGTGGTCAGG+TGG + chr1_3:34363401-34363420 Msa0115490:CDS 45.0%
GCTACCATGGCAAATATAGG+GGG - chr1_3:34363743-34363762 None:intergenic 45.0%
TGCAAAAGGGGGTGAAGTTA+GGG - chr1_3:34364826-34364845 None:intergenic 45.0%
TTGCAAAAGGGGGTGAAGTT+AGG - chr1_3:34364825-34364844 None:intergenic 45.0%
TGACCAGGTCAAAATCAGAG+GGG - chr1_3:34363837-34363856 None:intergenic 45.0%
AAAATTGCAGCCAATGGTGG+TGG - chr1_3:34364054-34364073 None:intergenic 45.0%
!! AAAAACTGCGGGAGAGTATC+AGG - chr1_3:34364106-34364125 None:intergenic 45.0%
! GCAGCATCAACTTTTCGATG+CGG + chr1_3:34364183-34364202 Msa0115490:intron 45.0%
! TAGGATTAGGATGGCTTGCA+CGG - chr1_3:34364221-34364240 None:intergenic 45.0%
CTGGAAACGTAGGATTAGGA+TGG - chr1_3:34364230-34364249 None:intergenic 45.0%
GCAACTGGAAACGTAGGATT+AGG - chr1_3:34364234-34364253 None:intergenic 45.0%
TCCTACGTTTCCAGTTGCTT+CGG + chr1_3:34364236-34364255 Msa0115490:intron 45.0%
AAATCGTCTACCGAAGCAAC+TGG - chr1_3:34364249-34364268 None:intergenic 45.0%
AGTTGGATGGGACGTATTGT+TGG + chr1_3:34364305-34364324 Msa0115490:intron 45.0%
ACGTATTGTTGGCGGTGATA+GGG + chr1_3:34364316-34364335 Msa0115490:intron 45.0%
GGTAAGTGTGCAGTTATGTG+TGG + chr1_3:34364408-34364427 Msa0115490:intron 45.0%
! GTGCAGTTATGTGTGGGTTT+TGG + chr1_3:34364415-34364434 Msa0115490:intron 45.0%
! GCAGTTATGTGTGGGTTTTG+GGG + chr1_3:34364417-34364436 Msa0115490:intron 45.0%
!!! TGGGTTTTGGGGCGTTAAAA+AGG + chr1_3:34364428-34364447 Msa0115490:intron 45.0%
!!! GTTTTGGGGCGTTAAAAAGG+AGG + chr1_3:34364431-34364450 Msa0115490:intron 45.0%
!! TGCTGGTGTTGTTCTTGTTC+TGG + chr1_3:34364595-34364614 Msa0115490:intron 45.0%
! ATTTCAAGTGGCCTTTGACC+AGG + chr1_3:34364778-34364797 Msa0115490:intron 45.0%
GACCAGGTCAAAATCAAAGG+GGG + chr1_3:34364794-34364813 Msa0115490:intron 45.0%
TGCAAAAGGGGGTGAAGTTA+AGG + chr1_3:34364826-34364845 Msa0115490:intron 45.0%
GCAAAAGGGGGTGAAGTTAA+GGG + chr1_3:34364827-34364846 Msa0115490:intron 45.0%
CAAAAGGGGGTGAAGTTAAG+GGG + chr1_3:34364828-34364847 Msa0115490:intron 45.0%
TCCGAGAACCTGAGAACAAT+AGG - chr1_3:34365004-34365023 None:intergenic 45.0%
TATTGTTCTCAGGTTCTCGG+AGG + chr1_3:34365003-34365022 Msa0115490:intron 45.0%
AATACGTCACTGAAAGGCAG+TGG + chr1_3:34365040-34365059 Msa0115490:CDS 45.0%
ATACGTCACTGAAAGGCAGT+GGG + chr1_3:34365041-34365060 Msa0115490:CDS 45.0%
! TTATGGCTACGGGTCTTATG+AGG + chr1_3:34365152-34365171 Msa0115490:CDS 45.0%
GGTGAACCTTTCTCTGTCTT+AGG + chr1_3:34365335-34365354 Msa0115490:intron 45.0%
! TTTTAGTCAGCCCGTTCCTT+TGG + chr1_3:34365551-34365570 Msa0115490:intron 45.0%
ACTTCTGCAACCAAAGGAAC+GGG - chr1_3:34365564-34365583 None:intergenic 45.0%
! TGTGGACAATTTGAGGTCAC+TGG - chr1_3:34365670-34365689 None:intergenic 45.0%
AGTGACCTCAAATTGTCCAC+AGG + chr1_3:34365669-34365688 Msa0115490:intron 45.0%
GCATACCTGTGGACAATTTG+AGG - chr1_3:34365677-34365696 None:intergenic 45.0%
GTTATAGCTCATATACGCGG+AGG + chr1_3:34365754-34365773 Msa0115490:CDS 45.0%
! TGCATAAATGGCAGAAGTGC+TGG + chr1_3:34365901-34365920 Msa0115490:CDS 45.0%
!! GCATAAATGGCAGAAGTGCT+GGG + chr1_3:34365902-34365921 Msa0115490:CDS 45.0%
!! CATAAATGGCAGAAGTGCTG+GGG + chr1_3:34365903-34365922 Msa0115490:CDS 45.0%
!! ATAAATGGCAGAAGTGCTGG+GGG + chr1_3:34365904-34365923 Msa0115490:CDS 45.0%
TTATTCAAGGCTGCTGTTGC+CGG + chr1_3:34365964-34365983 Msa0115490:CDS 45.0%
TTCCTCTCACTACTTCCGAA+TGG + chr1_3:34366031-34366050 Msa0115490:CDS 45.0%
TCCTCTCACTACTTCCGAAT+GGG + chr1_3:34366032-34366051 Msa0115490:CDS 45.0%
TGTCACTGCCAAAGATGCAT+TGG + chr1_3:34366249-34366268 Msa0115490:intron 45.0%
GTCATCTCATATGGAACGGA+GGG - chr1_3:34366513-34366532 None:intergenic 45.0%
AGTCATCTCATATGGAACGG+AGG - chr1_3:34366514-34366533 None:intergenic 45.0%
! TGTCACTTAATATGGGACGG+AGG + chr1_3:34366740-34366759 Msa0115490:intron 45.0%
GTCACTTAATATGGGACGGA+GGG + chr1_3:34366741-34366760 Msa0115490:intron 45.0%
AGAAATCACAGCTACATCCC+TGG + chr1_3:34366830-34366849 Msa0115490:intron 45.0%
CCCATTCCTACAGTAACAGA+AGG - chr1_3:34367304-34367323 None:intergenic 45.0%
AGCATACCTGATTCTTGGCT+CGG + chr1_3:34367579-34367598 Msa0115490:intron 45.0%
ATAGTTCCGAGCCAAGAATC+AGG - chr1_3:34367588-34367607 None:intergenic 45.0%
GGTTCAGAATACAGAACACG+TGG - chr1_3:34367696-34367715 None:intergenic 45.0%
TTCTGAACCTGCAAAGTTCG+TGG + chr1_3:34367707-34367726 Msa0115490:CDS 45.0%
!! GCTGGACATTTTTCGAAGTC+GGG + chr1_3:34367789-34367808 Msa0115490:CDS 45.0%
!! GACATTTTTCGAAGTCGGGA+AGG + chr1_3:34367793-34367812 Msa0115490:CDS 45.0%
TTTGGTTACGGTGGGAGAAA+TGG + chr1_3:34367896-34367915 Msa0115490:intron 45.0%
TTGGTTACGGTGGGAGAAAT+GGG + chr1_3:34367897-34367916 Msa0115490:intron 45.0%
CCCGGGTATAAAATGTTCCT+GGG - chr1_3:34368160-34368179 None:intergenic 45.0%
! CCCAGGAACATTTTATACCC+GGG + chr1_3:34368157-34368176 Msa0115490:intron 45.0%
TCCCGGGTATAAAATGTTCC+TGG - chr1_3:34368161-34368180 None:intergenic 45.0%
CTTCACAGCATCCACACTTT+AGG - chr1_3:34368772-34368791 None:intergenic 45.0%
GTCAAAACAAGCACAAAGCG+TGG - chr1_3:34369007-34369026 None:intergenic 45.0%
!!! GTAATTTTTATTTTATTTAT+TGG - chr1_3:34359975-34359994 None:intergenic 5.0%
!!! TTTTAAATAAAATAAAAACA+GGG - chr1_3:34361577-34361596 None:intergenic 5.0%
!!! ATTTTAAATAAAATAAAAAC+AGG - chr1_3:34361578-34361597 None:intergenic 5.0%
!! AAATATTTAATAAAACTATA+AGG + chr1_3:34363659-34363678 Msa0115490:intron 5.0%
!!! GTAATTTTATTTATATAATT+TGG + chr1_3:34368640-34368659 Msa0115490:intron 5.0%
GTGAGGACGGAAACAGTTAG+TGG - chr1_3:34360058-34360077 None:intergenic 50.0%
GATCGGAGCGAGAATCATCA+CGG - chr1_3:34360258-34360277 None:intergenic 50.0%
! CGGAGATAGGAAAGCACATC+GGG - chr1_3:34360280-34360299 None:intergenic 50.0%
!! TACACCGATTCCGTCATGTC+AGG + chr1_3:34360313-34360332 Msa0115490:CDS 50.0%
ATCCACGCAACTTGCATGTG+TGG + chr1_3:34360405-34360424 Msa0115490:intron 50.0%
TCCACGCAACTTGCATGTGT+GGG + chr1_3:34360406-34360425 Msa0115490:intron 50.0%
CTGACAAGAGGCTCTCCAAT+TGG - chr1_3:34361709-34361728 None:intergenic 50.0%
CATCATCACCAGCCCATTCA+AGG - chr1_3:34361744-34361763 None:intergenic 50.0%
CGCCTTAAGTGATACAGGCA+TGG + chr1_3:34362490-34362509 Msa0115490:intron 50.0%
!! GCGTGCTTGGCTTTTGAATG+TGG + chr1_3:34362928-34362947 Msa0115490:intron 50.0%
! GCTTTTGAATGTGGGGTCAC+TGG + chr1_3:34362937-34362956 Msa0115490:intron 50.0%
TCACTGGGTCGTGTGTTCAA+CGG + chr1_3:34362953-34362972 Msa0115490:intron 50.0%
CTTAGCGGTTCACCAACAGA+TGG - chr1_3:34363381-34363400 None:intergenic 50.0%
TTGGCCCCCTATATTTGCCA+TGG + chr1_3:34363736-34363755 Msa0115490:intron 50.0%
CAAAAGGGGGTGAAGTTAGG+GGG - chr1_3:34363802-34363821 None:intergenic 50.0%
GCAAAAGGGGGTGAAGTTAG+GGG - chr1_3:34363803-34363822 None:intergenic 50.0%
! CACCCCCTTTTGCAACTCAT+AGG + chr1_3:34363810-34363829 Msa0115490:intron 50.0%
GGCCTATGAGTTGCAAAAGG+GGG - chr1_3:34364815-34364834 None:intergenic 50.0%
GGGCCTATGAGTTGCAAAAG+GGG - chr1_3:34364814-34364833 None:intergenic 50.0%
GGGGCCTATGAGTTGCAAAA+GGG - chr1_3:34364813-34364832 None:intergenic 50.0%
GACCAGGTCAAAATCAGAGG+GGG - chr1_3:34363836-34363855 None:intergenic 50.0%
GTGGGGGTGAAGAAAAGAGA+AGG - chr1_3:34363995-34364014 None:intergenic 50.0%
ACCTGCAATCTGCACTTGTG+GGG - chr1_3:34364012-34364031 None:intergenic 50.0%
GACCTGCAATCTGCACTTGT+GGG - chr1_3:34364013-34364032 None:intergenic 50.0%
AGACCTGCAATCTGCACTTG+TGG - chr1_3:34364014-34364033 None:intergenic 50.0%
!! GGAGAGTATCAGGTCACTTG+TGG - chr1_3:34364096-34364115 None:intergenic 50.0%
! CGACGGTTTGGAAAAACTGC+GGG - chr1_3:34364117-34364136 None:intergenic 50.0%
! GCGACGGTTTGGAAAAACTG+CGG - chr1_3:34364118-34364137 None:intergenic 50.0%
! CAACTTTTCGATGCGGCTGT+TGG + chr1_3:34364190-34364209 Msa0115490:intron 50.0%
! AGGATTAGGATGGCTTGCAC+GGG - chr1_3:34364220-34364239 None:intergenic 50.0%
ACCGAAGCAACTGGAAACGT+AGG - chr1_3:34364240-34364259 None:intergenic 50.0%
GACGATTTCGTCGAGAGAGT+AGG + chr1_3:34364261-34364280 Msa0115490:intron 50.0%
TCGTCGAGAGAGTAGGATTC+AGG + chr1_3:34364268-34364287 Msa0115490:intron 50.0%
CGTCGAGAGAGTAGGATTCA+GGG + chr1_3:34364269-34364288 Msa0115490:intron 50.0%
GTCGAGAGAGTAGGATTCAG+GGG + chr1_3:34364270-34364289 Msa0115490:intron 50.0%
AGTCGAAGGTGGAGTTGGAT+GGG + chr1_3:34364293-34364312 Msa0115490:intron 50.0%
TGGATGGGACGTATTGTTGG+CGG + chr1_3:34364308-34364327 Msa0115490:intron 50.0%
GACGTATTGTTGGCGGTGAT+AGG + chr1_3:34364315-34364334 Msa0115490:intron 50.0%
ATGTTGTCGTTGGCGAGATC+CGG + chr1_3:34364358-34364377 Msa0115490:intron 50.0%
CAACAAACACTCTCCGTCAC+CGG - chr1_3:34364380-34364399 None:intergenic 50.0%
!! TGACGGAGAGTGTTTGTTGG+TGG + chr1_3:34364381-34364400 Msa0115490:intron 50.0%
!! AGAGTGTTTGTTGGTGGCGA+CGG + chr1_3:34364387-34364406 Msa0115490:intron 50.0%
! AGAAGGTGTGAGAGAGTTGC+TGG + chr1_3:34364578-34364597 Msa0115490:intron 50.0%
GGGGCCTATGAGTTGCAAAA+GGG + chr1_3:34364813-34364832 Msa0115490:intron 50.0%
GGGCCTATGAGTTGCAAAAG+GGG + chr1_3:34364814-34364833 Msa0115490:intron 50.0%
GGCCTATGAGTTGCAAAAGG+GGG + chr1_3:34364815-34364834 Msa0115490:intron 50.0%
! CACCCCCTTTTGCAACTCAT+AGG - chr1_3:34363810-34363829 None:intergenic 50.0%
GGGGGCCAAAATTGCTACAA+TGG + chr1_3:34364874-34364893 Msa0115490:intron 50.0%
CAGGCTCCTAAGACAGAGAA+AGG - chr1_3:34365344-34365363 None:intergenic 50.0%
TAGCGCCCATATACCACAGA+GGG - chr1_3:34365529-34365548 None:intergenic 50.0%
ATAGCGCCCATATACCACAG+AGG - chr1_3:34365530-34365549 None:intergenic 50.0%
CTGGGATCTATGCATACCTG+TGG - chr1_3:34365688-34365707 None:intergenic 50.0%
ATAGCTCATATACGCGGAGG+TGG + chr1_3:34365757-34365776 Msa0115490:CDS 50.0%
TATACGCGGAGGTGGTGAAA+TGG + chr1_3:34365765-34365784 Msa0115490:CDS 50.0%
ATACGCGGAGGTGGTGAAAT+GGG + chr1_3:34365766-34365785 Msa0115490:CDS 50.0%
GGAGGCAGTGGTATGAGAAT+GGG + chr1_3:34365788-34365807 Msa0115490:CDS 50.0%
!! AGTGCTGGGGGTTTGCTAAT+TGG + chr1_3:34365916-34365935 Msa0115490:CDS 50.0%
!! TGTTGCCGGAGTACCTTTTG+TGG + chr1_3:34365978-34365997 Msa0115490:CDS 50.0%
TCCCATTCGGAAGTAGTGAG+AGG - chr1_3:34366036-34366055 None:intergenic 50.0%
TCTCACTACTTCCGAATGGG+AGG + chr1_3:34366035-34366054 Msa0115490:CDS 50.0%
CATATGGAACGGAGGGAGTA+AGG - chr1_3:34366506-34366525 None:intergenic 50.0%
CCAGCAGTGTGACAGTGAAT+GGG - chr1_3:34366794-34366813 None:intergenic 50.0%
TGTAGGAATGGGGTGATCCT+AGG + chr1_3:34367312-34367331 Msa0115490:intron 50.0%
CGTGGGTCTACAGAATGTAC+AGG - chr1_3:34367678-34367697 None:intergenic 50.0%
GTCTTGGGATGCCTAAAGTG+TGG + chr1_3:34368758-34368777 Msa0115490:exon 50.0%
GTGTGGATGCTGTGAAGAGA+TGG + chr1_3:34368775-34368794 Msa0115490:three_prime_UTR 50.0%
GAAACCAGCAGCATATACCC+TGG + chr1_3:34368825-34368844 Msa0115490:three_prime_UTR 50.0%
AGAACCAGGGTATATGCTGC+TGG - chr1_3:34368832-34368851 None:intergenic 50.0%
GAGGTGAAGTCGTCATCGGA+CGG - chr1_3:34360126-34360145 None:intergenic 55.0%
TGCGGAGGTGAAGTCGTCAT+CGG - chr1_3:34360130-34360149 None:intergenic 55.0%
GACTGTGACAGAGATTGCGG+AGG - chr1_3:34360145-34360164 None:intergenic 55.0%
TCATTCTCCGCTTCCTCCTC+CGG + chr1_3:34360165-34360184 Msa0115490:CDS 55.0%
TCCCACACATGCAAGTTGCG+TGG - chr1_3:34360410-34360429 None:intergenic 55.0%
ATATCGGCACCCGTACGCAA+AGG + chr1_3:34361287-34361306 Msa0115490:CDS 55.0%
TATCGGCACCCGTACGCAAA+GGG + chr1_3:34361288-34361307 Msa0115490:CDS 55.0%
AGCATCAGGTCCTGTAGGCA+TGG - chr1_3:34361414-34361433 None:intergenic 55.0%
TACAGGACCTGATGCTCCTC+CGG + chr1_3:34361418-34361437 Msa0115490:CDS 55.0%
GGAGGATTTCCCACCTTGTC+AGG - chr1_3:34361802-34361821 None:intergenic 55.0%
CAGGCATGGCTTCATGCGTT+AGG + chr1_3:34362504-34362523 Msa0115490:intron 55.0%
GACACTACTGTCAGCCATCG+TGG + chr1_3:34362720-34362739 Msa0115490:CDS 55.0%
GCGGTTCACCAACAGATGGA+AGG - chr1_3:34363377-34363396 None:intergenic 55.0%
GGGGGCCAAAATTGCTACCA+TGG - chr1_3:34363756-34363775 None:intergenic 55.0%
GGGGGCCTATGAGTTGCAAA+AGG - chr1_3:34364812-34364831 None:intergenic 55.0%
CCTGCAATCTGCACTTGTGG+GGG - chr1_3:34364011-34364030 None:intergenic 55.0%
!! GCAGCCAATGGTGGTGGTAA+TGG - chr1_3:34364048-34364067 None:intergenic 55.0%
TTGTTCCCAGCAAGTGGCGA+CGG - chr1_3:34364134-34364153 None:intergenic 55.0%
GTAGGATTCAGGGGAGTCGA+AGG + chr1_3:34364279-34364298 Msa0115490:intron 55.0%
GAGTCGAAGGTGGAGTTGGA+TGG + chr1_3:34364292-34364311 Msa0115490:intron 55.0%
!! CGGTGACGGAGAGTGTTTGT+TGG + chr1_3:34364378-34364397 Msa0115490:intron 55.0%
! TGGGGCGTTAAAAAGGAGGG+TGG + chr1_3:34364435-34364454 Msa0115490:intron 55.0%
!! GGCCCCCTTTGATTTTGACC+TGG - chr1_3:34364799-34364818 None:intergenic 55.0%
GGGGGCCTATGAGTTGCAAA+AGG + chr1_3:34364812-34364831 Msa0115490:intron 55.0%
TACGCGGAGGTGGTGAAATG+GGG + chr1_3:34365767-34365786 Msa0115490:CDS 55.0%
GGGAGGCAGTGGTATGAGAA+TGG + chr1_3:34365787-34365806 Msa0115490:CDS 55.0%
!! GCTGGGGGTTTGCTAATTGG+TGG + chr1_3:34365919-34365938 Msa0115490:CDS 55.0%
TGGAACGGAGGGAGTAAGGA+AGG - chr1_3:34366502-34366521 None:intergenic 55.0%
CCCATTCACTGTCACACTGC+TGG + chr1_3:34366791-34366810 Msa0115490:intron 55.0%
GCCAGCAGTGTGACAGTGAA+TGG - chr1_3:34366795-34366814 None:intergenic 55.0%
GGAATGGGGTGATCCTAGGA+AGG + chr1_3:34367316-34367335 Msa0115490:intron 55.0%
ATGGGGTGATCCTAGGAAGG+AGG + chr1_3:34367319-34367338 Msa0115490:CDS 55.0%
!! AACGCGGCGGTGGTGGAAAA+AGG - chr1_3:34360091-34360110 None:intergenic 60.0%
GTGAAGTCGTCATCGGACGG+CGG - chr1_3:34360123-34360142 None:intergenic 60.0%
TGCTCGACCTTCTTCGCCAC+CGG - chr1_3:34360187-34360206 None:intergenic 60.0%
!! GGAGGAGCATCAGGTCCTGT+AGG - chr1_3:34361419-34361438 None:intergenic 60.0%
!! ACATGCTCCGGAGGAGCATC+AGG - chr1_3:34361428-34361447 None:intergenic 60.0%
!! GGCCCCCTCTGATTTTGACC+TGG + chr1_3:34363831-34363850 Msa0115490:intron 60.0%
CCCCCACAAGTGCAGATTGC+AGG + chr1_3:34364008-34364027 Msa0115490:intron 60.0%
TCCAAACCGTCGCCACTTGC+TGG + chr1_3:34364125-34364144 Msa0115490:intron 60.0%
CCAAACCGTCGCCACTTGCT+GGG + chr1_3:34364126-34364145 Msa0115490:intron 60.0%
GGATTCAGGGGAGTCGAAGG+TGG + chr1_3:34364282-34364301 Msa0115490:intron 60.0%
AGGGGAGTCGAAGGTGGAGT+TGG + chr1_3:34364288-34364307 Msa0115490:intron 60.0%
TCGTTGGCGAGATCCGGTGA+CGG + chr1_3:34364364-34364383 Msa0115490:intron 60.0%
GGGGGTGAAGTTAAGGGGCT+AGG + chr1_3:34364833-34364852 Msa0115490:intron 60.0%
CAGTGGGCACGTGCTTCAGA+TGG + chr1_3:34365057-34365076 Msa0115490:CDS 60.0%
GTGGTGAAATGGGGAGGCAG+TGG + chr1_3:34365776-34365795 Msa0115490:CDS 60.0%
ACGGCGGTGGTGAGAGAACG+CGG - chr1_3:34360107-34360126 None:intergenic 65.0%
AAGTCGTCATCGGACGGCGG+TGG - chr1_3:34360120-34360139 None:intergenic 65.0%
TTCTCCGCTTCCTCCTCCGG+TGG + chr1_3:34360168-34360187 Msa0115490:CDS 65.0%
TTCGCCACCGGAGGAGGAAG+CGG - chr1_3:34360175-34360194 None:intergenic 65.0%
TCCTCCTCCGGTGGCGAAGA+AGG + chr1_3:34360177-34360196 Msa0115490:CDS 65.0%
ACCTTCTTCGCCACCGGAGG+AGG - chr1_3:34360181-34360200 None:intergenic 65.0%
TCGACCTTCTTCGCCACCGG+AGG - chr1_3:34360184-34360203 None:intergenic 65.0%
AGGGGGTGAAGTTAGGGGGC+TGG - chr1_3:34363798-34363817 None:intergenic 65.0%
CCCAGCAAGTGGCGACGGTT+TGG - chr1_3:34364129-34364148 None:intergenic 65.0%
GCGGAGGTGGTGAAATGGGG+AGG + chr1_3:34365770-34365789 Msa0115490:CDS 65.0%
GTGAGAGAACGCGGCGGTGG+TGG - chr1_3:34360098-34360117 None:intergenic 70.0%
GTGGTGAGAGAACGCGGCGG+TGG - chr1_3:34360101-34360120 None:intergenic 70.0%
GCGGTGGTGAGAGAACGCGG+CGG - chr1_3:34360104-34360123 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34359866 34369149 34359866 ID=Msa0115490;Name=Msa0115490
chr1_3 mRNA 34359866 34369149 34359866 ID=Msa0115490-mRNA-1;Parent=Msa0115490;Name=Msa0115490-mRNA-1;_AED=0.15;_eAED=0.15;_QI=135|1|1|1|0.90|0.83|12|368|763
chr1_3 exon 34359866 34360334 34359866 ID=Msa0115490-mRNA-1:exon:10792;Parent=Msa0115490-mRNA-1
chr1_3 exon 34361225 34361508 34361225 ID=Msa0115490-mRNA-1:exon:10793;Parent=Msa0115490-mRNA-1
chr1_3 exon 34361613 34361807 34361613 ID=Msa0115490-mRNA-1:exon:10794;Parent=Msa0115490-mRNA-1
chr1_3 exon 34362507 34362853 34362507 ID=Msa0115490-mRNA-1:exon:10795;Parent=Msa0115490-mRNA-1
chr1_3 exon 34363287 34363578 34363287 ID=Msa0115490-mRNA-1:exon:10796;Parent=Msa0115490-mRNA-1
chr1_3 exon 34365015 34365173 34365015 ID=Msa0115490-mRNA-1:exon:10797;Parent=Msa0115490-mRNA-1
chr1_3 exon 34365691 34366056 34365691 ID=Msa0115490-mRNA-1:exon:10798;Parent=Msa0115490-mRNA-1
chr1_3 exon 34367317 34367382 34367317 ID=Msa0115490-mRNA-1:exon:10799;Parent=Msa0115490-mRNA-1
chr1_3 exon 34367527 34367575 34367527 ID=Msa0115490-mRNA-1:exon:10800;Parent=Msa0115490-mRNA-1
chr1_3 exon 34367691 34367814 34367691 ID=Msa0115490-mRNA-1:exon:10801;Parent=Msa0115490-mRNA-1
chr1_3 exon 34368683 34369010 34368683 ID=Msa0115490-mRNA-1:exon:10802;Parent=Msa0115490-mRNA-1
chr1_3 exon 34369034 34369149 34369034 ID=Msa0115490-mRNA-1:exon:10803;Parent=Msa0115490-mRNA-1
chr1_3 five_prime_UTR 34359866 34360000 34359866 ID=Msa0115490-mRNA-1:five_prime_utr;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34360001 34360334 34360001 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34361225 34361508 34361225 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34361613 34361807 34361613 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34362507 34362853 34362507 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34363287 34363578 34363287 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34365015 34365173 34365015 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34365691 34366056 34365691 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34367317 34367382 34367317 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34367527 34367575 34367527 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34367691 34367814 34367691 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 CDS 34368683 34368758 34368683 ID=Msa0115490-mRNA-1:cds;Parent=Msa0115490-mRNA-1
chr1_3 three_prime_UTR 34368759 34369010 34368759 ID=Msa0115490-mRNA-1:three_prime_utr;Parent=Msa0115490-mRNA-1
chr1_3 three_prime_UTR 34369034 34369149 34369034 ID=Msa0115490-mRNA-1:three_prime_utr;Parent=Msa0115490-mRNA-1
Gene Sequence

>Msa0115490

ATGCTAAATCAAAATCTTGTTCGCTTAAACATTAGTCGATTATTCTGCTGCATTCCACTAACTGTTTCCGTCCTCACTCTTTCTCTTCCTTTTTCCACCACCGCCGCGTTCTCTCACCACCGCCGTCCGATGACGACTTCACCTCCGCAATCTCTGTCACAGTCTCATTCTCCGCTTCCTCCTCCGGTGGCGAAGAAGGTCGAGCACAAAATGGAGCTTTTCAATGATGTTAGAATCGATAACTACTACTGGCTCCGTGATGATTCTCGCTCCGATCCCGATGTGCTTTCCTATCTCCGTCAAGAAAATGATTACACCGATTCCGTCATGTCAGGAACCAAAAAAATTGAAGATAAGCTTTTTGCTGAGATAAAAGGAAGGATAAAGGAGGAAGATATATCGGCACCCGTACGCAAAGGGCCTTATTACTATTATAAGAAAACATTGGAAGGAAAGGAGTATGTTCAATATTGTAGACGCCTTATATCTGATAACCAAAAGGTTCCATCTGTTAATGACACCATGCCTACAGGACCTGATGCTCCTCCGGAGCATGTTATTTTGGATGAGAATATCAAGGCACAACAGCACAAATACTACAGTATCGGTACTTTTAAGGTTAGCCCAAATAACAAGTTAGTAGCATATGCAGAAGACACCAAAGGAGATGAAATATATACTGTTTATGTCATGAATATCGAGACTCAAGCTCCAATTGGAGAGCCTCTTGTCAGTGTAACATCAAACCTTGAATGGGCTGGTGATGATGCTCTAGTTTATGTAACAATGGATAATATTCTTAGACCTGACAAGGCATGGCTTCATGCGTTAGGAACAAAACAATCAAAAGATACTTGTCTTTACGAGGAAAAAGATGATACGTTTTCTCTTGACCTTGAAGCTTCCGAGAACAAGAAATATTTGTTTGTTGCATCGGAAAGTAAAACTACAAGGTTCAATTTTTATCTTGATGTTTCCAAGCCTGAAGAAGGTCTTAAAGTTTTGACACAACGTGTGGATGGTATTGACACTACTGTCAGCCATCGTGGAGATCATTTCTTTATTAAGCGGAGAAGTGATCAATTTTTCAATTCAGAAGTTGTAGCATGTGCTGTCAACAACACCTCTTCAACTACAGTTCTTATTCCCCACAGAGAAAGTGTGAAAATTCAGGAGATACAACTTTTTAGCGATCATCTTGTTGCATATGAGAGAGAAAATGGTCTACCAAAAATAATTGTTTATCACCTTCCATCTGTTGGTGAACCGCTAAGAAGTCTTGAAAGTGGTCAGGTGGTTAGTTTTATTGATCCAGTATACTATGTGGATTCTTCAGAGTCAGAGTTTTCGTCAAGTATTTTACGATTTTCATATAGCTCATTGAAGACGCCTCCTTCTGTTTATGACTATGATATGAAGGCTGGAATTTCAGTTTTGAAGAAGATTGACTCGGTTCTCGGAGGTTTTGATGCAACAAAATACGTCACTGAAAGGCAGTGGGCACGTGCTTCAGATGGAACTTTGATTCCCATGTCACTTGTATACCGAAAAGATCTTGTGAAGCTCGATGGATCAGATCCATTACTACTTTATGGCTACGGGTCTTATGAGGTATGCATAGATCCCAGTTTCAAGTCATCAAGGCTTTCATTGTTAGATCGAGGTTTCATATATGTTATAGCTCATATACGCGGAGGTGGTGAAATGGGGAGGCAGTGGTATGAGAATGGGAAGCTGCTGAAGAAAAAGAACACTTTCACTGATTTTATTGCATGTGCTGAACATTTAATTGAAAAAAAATTCTGTTCCAAGGAAAGACTTTGCATAAATGGCAGAAGTGCTGGGGGTTTGCTAATTGGTGGAGTTCTTAATATGAGACCGGATTTATTCAAGGCTGCTGTTGCCGGAGTACCTTTTGTGGATGTTGTGACAACAATGCTTGATCCAACTATTCCTCTCACTACTTCCGAATGGGAGGAATGGGGTGATCCTAGGAAGGAGGAATTCTACTTCTACATGAAGTCATATTCCCCTGTTGATAATGTCAAAGCACAGAATTACCCACATATTCTTGTTACAGCTGGATTAAATGACCCACGTGTTCTGTATTCTGAACCTGCAAAGTTCGTGGCAAAATTGAGGGATATGAAAACTGATGATAACATACTGTTGTTTAAATGTGAGCTTGGTGCTGGACATTTTTCGAAGTCGGGAAGATTTGAGAAACTTCAGGAAGACGCCTTCACTTATACATTCTTCCTAAAGACTCTAAACATGACTAATCATCTTTAG
Protein sequence

>Msa0115490

MLNQNLVRLNISRLFCCIPLTVSVLTLSLPFSTTAAFSHHRRPMTTSPPQSLSQSHSPLPPPVAKKVEHKMELFNDVRIDNYYWLRDDSRSDPDVLSYLRQENDYTDSVMSGTKKIEDKLFAEIKGRIKEEDISAPVRKGPYYYYKKTLEGKEYVQYCRRLISDNQKVPSVNDTMPTGPDAPPEHVILDENIKAQQHKYYSIGTFKVSPNNKLVAYAEDTKGDEIYTVYVMNIETQAPIGEPLVSVTSNLEWAGDDALVYVTMDNILRPDKAWLHALGTKQSKDTCLYEEKDDTFSLDLEASENKKYLFVASESKTTRFNFYLDVSKPEEGLKVLTQRVDGIDTTVSHRGDHFFIKRRSDQFFNSEVVACAVNNTSSTTVLIPHRESVKIQEIQLFSDHLVAYERENGLPKIIVYHLPSVGEPLRSLESGQVVSFIDPVYYVDSSESEFSSSILRFSYSSLKTPPSVYDYDMKAGISVLKKIDSVLGGFDATKYVTERQWARASDGTLIPMSLVYRKDLVKLDGSDPLLLYGYGSYEVCIDPSFKSSRLSLLDRGFIYVIAHIRGGGEMGRQWYENGKLLKKKNTFTDFIACAEHLIEKKFCSKERLCINGRSAGGLLIGGVLNMRPDLFKAAVAGVPFVDVVTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVLYSEPAKFVAKLRDMKTDDNILLFKCELGAGHFSKSGRFEKLQEDAFTYTFFLKTLNMTNHL*