AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0039160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039160 MtrunA17_Chr1g0203181 100.000 449 0 0 1 449 1 449 0.0 946
Msa0039160 MtrunA17_Chr7g0255791 96.413 446 15 1 1 446 1 445 0.0 905
Msa0039160 MtrunA17_Chr4g0008361 97.674 430 10 0 1 430 1 430 0.0 863
Msa0039160 MtrunA17_Chr4g0008401 97.209 430 12 0 1 430 1 430 0.0 857
Msa0039160 MtrunA17_Chr2g0292921 96.047 430 17 0 1 430 1 430 0.0 850
Msa0039160 MtrunA17_Chr4g0051631 95.116 430 21 0 1 430 1 430 0.0 843
Msa0039160 MtrunA17_Chr4g0007371 95.370 432 18 1 1 430 1 432 0.0 842
Msa0039160 MtrunA17_Chr3g0142731 93.287 432 27 1 1 430 1 432 0.0 830
Msa0039160 MtrunA17_Chr8g0393021 91.422 443 37 1 1 442 1 443 0.0 827
Msa0039160 MtrunA17_Chr8g0386781 91.628 430 36 0 1 430 1 430 0.0 818
Msa0039160 MtrunA17_Chr8g0378821 41.475 434 244 2 1 424 1 434 4.65e-124 368
Msa0039160 MtrunA17_Chr3g0140821 41.705 434 243 2 1 424 1 434 1.34e-123 367
Msa0039160 MtrunA17_Chr4g0054511 41.475 434 244 2 1 424 1 434 4.83e-123 365
Msa0039160 MtrunA17_Chr1g0206881 41.244 434 245 2 1 424 1 434 6.12e-122 362
Msa0039160 MtrunA17_Chr6g0461281 40.402 448 256 2 1 437 1 448 8.21e-122 362
Msa0039160 MtrunA17_Chr7g0253411 40.553 434 248 2 1 424 1 434 9.03e-122 362
Msa0039160 MtrunA17_Chr2g0300671 37.045 440 264 4 1 431 1 436 6.16e-99 303
Msa0039160 MtrunA17_Chr2g0300491 36.667 450 274 3 1 442 1 447 8.56e-98 301
Msa0039160 MtrunA17_Chr7g0275431 35.160 438 267 7 2 423 3 439 7.62e-97 299
Msa0039160 MtrunA17_Chr3g0109241 31.852 135 84 1 269 395 4 138 3.04e-21 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039160 AT5G23860.2 98.218 449 7 1 1 448 1 449 0.0 927
Msa0039160 AT5G23860.1 98.218 449 7 1 1 448 1 449 0.0 927
Msa0039160 AT5G62690.1 97.105 449 11 2 1 448 1 448 0.0 915
Msa0039160 AT5G62700.1 97.105 449 11 2 1 448 1 448 0.0 915
Msa0039160 AT2G29550.1 96.752 431 14 0 1 431 1 431 0.0 855
Msa0039160 AT5G12250.1 96.977 430 13 0 1 430 1 430 0.0 854
Msa0039160 AT1G75780.1 94.200 431 24 1 1 430 1 431 0.0 838
Msa0039160 AT1G20010.1 93.735 431 26 1 1 430 1 431 0.0 835
Msa0039160 AT4G20890.1 93.488 430 28 0 1 430 1 430 0.0 829
Msa0039160 AT5G44340.1 92.558 430 32 0 1 430 1 430 0.0 823
Msa0039160 AT5G19780.1 41.475 434 244 2 1 424 1 434 3.93e-124 368
Msa0039160 AT5G19770.1 41.475 434 244 2 1 424 1 434 3.93e-124 368
Msa0039160 AT1G64740.1 41.014 434 246 2 1 424 1 434 1.34e-123 367
Msa0039160 AT4G14960.2 41.705 434 243 2 1 424 1 434 2.20e-122 364
Msa0039160 AT1G50010.1 41.475 434 244 2 1 424 1 434 1.50e-121 362
Msa0039160 AT1G04820.1 41.475 434 244 2 1 424 1 434 1.50e-121 362
Msa0039160 AT4G14960.1 41.710 386 215 2 1 376 1 386 9.44e-103 313
Msa0039160 AT3G61650.1 35.388 438 266 7 2 423 3 439 5.17e-97 300
Msa0039160 AT5G05620.1 35.388 438 266 7 2 423 3 439 5.34e-97 300

Find 148 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATATTATTCATGTTAA+TGG 0.124820 1_1:-68691910 Msa0039160:three_prime_UTR
AGCTTGGAGTAGTGAGTTTA+AGG 0.176825 1_1:+68692948 None:intergenic
CCCTCGTTTGCATTTCTTCA+TGG 0.183235 1_1:-68692681 Msa0039160:CDS
GCACACAACTTCCCAGAATT+TGG 0.196817 1_1:+68694620 None:intergenic
TTGTTTGCTATTGTAGTTTC+AGG 0.209930 1_1:-68691981 Msa0039160:three_prime_UTR
ACCAAATCGGAGCCAAATTC+TGG 0.224594 1_1:-68694632 Msa0039160:CDS
GCTTTCTTGCATTGGTATAC+TGG 0.248415 1_1:-68692284 Msa0039160:CDS
ACCTTTCGCCCAGTTGTTTC+CGG 0.265804 1_1:+68694383 None:intergenic
CGGCCTGATAACTTCGTCTT+TGG 0.273503 1_1:-68694417 Msa0039160:CDS
CTTGGTGGTGGTACTGGTTC+TGG 0.275474 1_1:-68693175 Msa0039160:CDS
TGGTAACTCCACATCTATTC+AGG 0.284386 1_1:-68692357 Msa0039160:CDS
CATGAATAATATGGAAATAT+AGG 0.286290 1_1:+68691917 None:intergenic
AACCATTAACATGAATAATA+TGG 0.293233 1_1:+68691908 None:intergenic
GAACTCAGATCTTCGCAAAT+TGG 0.295990 1_1:-68692723 Msa0039160:CDS
CCCGCCAACTGGTCTTAAAA+TGG 0.306035 1_1:-68692393 Msa0039160:CDS
AGATGAGGAGGAAGAAGTTC+AGG 0.309205 1_1:-68692147 Msa0039160:CDS
CACTCCCTTGGTGGTGGTAC+TGG 0.316198 1_1:-68693181 Msa0039160:CDS
CATCTATTCAGGAGATGTTT+AGG 0.317382 1_1:-68692346 Msa0039160:CDS
CGCCCAGTTGTTTCCGGCAC+CGG 0.324024 1_1:+68694389 None:intergenic
CAGTAGCATCTTGGTATTGC+TGG 0.336251 1_1:+68692195 None:intergenic
GGATCTGGAGCCAGGGACTA+TGG 0.340774 1_1:-68694475 Msa0039160:CDS
GACAGTGGATTTCACATTGT+TGG 0.341115 1_1:+68692424 None:intergenic
TCTTCGAATCCCACATCTGC+TGG 0.346684 1_1:+68692591 None:intergenic
GTTCTCATGGATCTGGAGCC+AGG 0.354959 1_1:-68694483 Msa0039160:CDS
CCCAGAATTTGGCTCCGATT+TGG 0.356984 1_1:+68694631 None:intergenic
GGTGGTACTGGTTCTGGAAT+GGG 0.369152 1_1:-68693169 Msa0039160:CDS
TCATTGTGGCCGAAATTAGA+TGG 0.369833 1_1:+68692783 None:intergenic
AGTCCGGTGCCGGAAACAAC+TGG 0.370377 1_1:-68694392 Msa0039160:CDS
TGAGTTTGAAGAACGAGTTT+TGG 0.379865 1_1:+68694703 None:intergenic
GAGAATTGTGATTGTCTTCA+AGG 0.384367 1_1:-68694300 Msa0039160:intron
AGATCTGAACCATCTAATTT+CGG 0.387444 1_1:-68692792 Msa0039160:CDS
TCATTTCTCATAGAATTCTC+TGG 0.389916 1_1:-68694814 Msa0039160:five_prime_UTR
TGTCCAAAGACGAAGTTATC+AGG 0.391751 1_1:+68694414 None:intergenic
TGCTGATGAATGCATGGTTC+TGG 0.393880 1_1:-68693005 Msa0039160:CDS
ACAGTGGATTTCACATTGTT+GGG 0.397830 1_1:+68692425 None:intergenic
TCTTAATCTTACAACTGAAC+TGG 0.407608 1_1:-68691836 Msa0039160:three_prime_UTR
GGTTCCCGCATTGTCCTCCT+TGG 0.410215 1_1:+68694652 None:intergenic
TAGAGCTGTTCTCATGGATC+TGG 0.416476 1_1:-68694490 Msa0039160:CDS
CAGGTTTGCCACTCCCTTGG+TGG 0.418895 1_1:-68693190 Msa0039160:CDS
CGTTTGCATTTCTTCATGGT+GGG 0.424005 1_1:-68692677 Msa0039160:CDS
TTTCAGGTTTGCCACTCCCT+TGG 0.428262 1_1:-68693193 Msa0039160:CDS
GTTGTTCCCTTGGTACCTTC+CGG 0.430541 1_1:+68694575 None:intergenic
GTTGAAGATCGTTGTTCCCT+TGG 0.430648 1_1:+68694565 None:intergenic
GTCTGTGATATCCCGCCAAC+TGG 0.432545 1_1:-68692404 Msa0039160:CDS
TGGTGGTACTGGTTCTGGAA+TGG 0.433580 1_1:-68693170 Msa0039160:CDS
ATATTATTCATGTTAATGGT+TGG 0.434131 1_1:-68691906 Msa0039160:three_prime_UTR
AAAGTAAGCATCATTCGATC+AGG 0.435587 1_1:+68693112 None:intergenic
GTAGAAAAGCTTTCTTGCAT+TGG 0.442451 1_1:-68692292 Msa0039160:CDS
CTCGTGGTTCACAGCAGTAC+AGG 0.444979 1_1:-68692637 Msa0039160:CDS
GCTTGGAGTAGTGAGTTTAA+GGG 0.448732 1_1:+68692949 None:intergenic
ATTCGGTGCTTGATGTTGTT+AGG 0.449556 1_1:-68694332 Msa0039160:CDS
ACTTTATAGCGGGATGTAAC+GGG 0.452762 1_1:+68694866 None:intergenic
GACTTTATAGCGGGATGTAA+CGG 0.454349 1_1:+68694865 None:intergenic
GTCTTTGGACAGTCCGGTGC+CGG 0.454398 1_1:-68694402 Msa0039160:CDS
ACATGTTGTCTTCGATTCCC+TGG 0.455659 1_1:-68692752 Msa0039160:CDS
AACTTCGTCTTTGGACAGTC+CGG 0.467613 1_1:-68694408 Msa0039160:CDS
CACATCTGCTGGGTCAGCTC+AGG 0.473481 1_1:+68692602 None:intergenic
CTCCGTGTTCCCATCTCCTA+AGG 0.475795 1_1:-68693089 Msa0039160:CDS
CTTCATCTGCAGTAGCATCT+TGG 0.477927 1_1:+68692186 None:intergenic
CGTTCCTAGAGCTGTTCTCA+TGG 0.485327 1_1:-68694496 Msa0039160:CDS
CCAAATCGGAGCCAAATTCT+GGG 0.486989 1_1:-68694631 Msa0039160:CDS
CATCTGCTCATCAACCTCCT+TGG 0.489308 1_1:+68692493 None:intergenic
TGGAGAGGGTATGGATGAGA+TGG 0.489491 1_1:-68692264 Msa0039160:CDS
TTGGTATACTGGAGAGGGTA+TGG 0.494465 1_1:-68692273 Msa0039160:CDS
TCTCTCTCTCGAACTCGTTA+CGG 0.497184 1_1:-68694746 Msa0039160:five_prime_UTR
ACTATGGACAGCGTCAGATC+TGG 0.497511 1_1:-68694459 Msa0039160:CDS
GTTTGCCACTCCCTTGGTGG+TGG 0.498542 1_1:-68693187 Msa0039160:CDS
TTCTCATGGATCTGGAGCCA+GGG 0.504140 1_1:-68694482 Msa0039160:CDS
GTGTCAGATACCTTAGGAGA+TGG 0.506140 1_1:+68693079 None:intergenic
GAAGTTGTGTGCGCTGAGCA+CGG 0.506720 1_1:-68694609 Msa0039160:CDS
GGACAATGCGGGAACCAAAT+CGG 0.507915 1_1:-68694645 Msa0039160:CDS
CTGAGCTGACCCAGCAGATG+TGG 0.508297 1_1:-68692601 Msa0039160:CDS
ACAGAGAGTGTAGCGTTGTA+AGG 0.511785 1_1:+68693046 None:intergenic
ACAGTAGTATTGTGATGTGA+AGG 0.515826 1_1:-68692110 Msa0039160:three_prime_UTR
AGGAGCTGAGTTGATTGATT+CGG 0.521449 1_1:-68694349 Msa0039160:CDS
ATTCATCATACTTTGTTGAG+TGG 0.522858 1_1:-68692451 Msa0039160:CDS
GTCAAATAACGACCGTGGCG+AGG 0.525061 1_1:+68692548 None:intergenic
TGAGGAGGAAGAAGTTCAGG+AGG 0.525475 1_1:-68692144 Msa0039160:CDS
TTGCATTGGTATACTGGAGA+GGG 0.526307 1_1:-68692278 Msa0039160:CDS
GGGGTATGACTATGAAGATG+AGG 0.526329 1_1:-68692162 Msa0039160:CDS
GGCCGGAAAATCTGACCGTA+TGG 0.526703 1_1:+68694435 None:intergenic
CATCAGCATTCTCAACAAGT+TGG 0.528768 1_1:+68693020 None:intergenic
AGATCTGAGTTCAATTGACC+AGG 0.531971 1_1:+68692734 None:intergenic
CTTCGAATCCCACATCTGCT+GGG 0.532809 1_1:+68692592 None:intergenic
ACAACAGTGTCAGATACCTT+AGG 0.533881 1_1:+68693073 None:intergenic
TCGTTTGCATTTCTTCATGG+TGG 0.534932 1_1:-68692678 Msa0039160:CDS
AAGAAATGCAAACGAGGGAA+AGG 0.537226 1_1:+68692686 None:intergenic
GAAGAAAGTGACTTTATAGC+GGG 0.540763 1_1:+68694856 None:intergenic
GGTGCTTGATGTTGTTAGGA+AGG 0.544190 1_1:-68694328 Msa0039160:CDS
AAGTTGTGTGCGCTGAGCAC+GGG 0.549539 1_1:-68694608 Msa0039160:CDS
TACTACAACGAAGCGAGTTG+TGG 0.552610 1_1:-68694525 Msa0039160:CDS
GAGGGTGAGTGAGCAATTCA+CGG 0.553083 1_1:-68692324 Msa0039160:CDS
GCCGGAAACAACTGGGCGAA+AGG 0.556278 1_1:-68694384 Msa0039160:CDS
AGCGTCAGATCTGGTCCATA+CGG 0.561086 1_1:-68694450 Msa0039160:CDS
GAGTAGTGAGTTTAAGGGTG+CGG 0.561131 1_1:+68692954 None:intergenic
AGATGCTACTGCAGATGAAG+AGG 0.562679 1_1:-68692183 Msa0039160:CDS
ACATCCAAGGAGGACAATGC+GGG 0.563147 1_1:-68694656 Msa0039160:CDS
CTTGCATTGGTATACTGGAG+AGG 0.565550 1_1:-68692279 Msa0039160:CDS
CTAATTTCGGCCACAATGAG+TGG 0.567054 1_1:-68692779 Msa0039160:CDS
AGATCCATGAGAACAGCTCT+AGG 0.569536 1_1:+68694492 None:intergenic
CTATTCAGGAGATGTTTAGG+AGG 0.571191 1_1:-68692343 Msa0039160:CDS
CTGACGCTGTCCATAGTCCC+TGG 0.571304 1_1:+68694465 None:intergenic
GTATGACTATGAAGATGAGG+AGG 0.571612 1_1:-68692159 Msa0039160:CDS
CAGCATTCTCAACAAGTTGG+TGG 0.573199 1_1:+68693023 None:intergenic
TTTGCCCCACTCACTTCTCG+TGG 0.577800 1_1:-68692653 Msa0039160:CDS
TCGTGGTTCACAGCAGTACA+GGG 0.585028 1_1:-68692636 Msa0039160:CDS
GAGCACGGGATCGACTCCAC+CGG 0.585627 1_1:-68694594 Msa0039160:CDS
CAGTAGTATTGTGATGTGAA+GGG 0.586251 1_1:-68692109 Msa0039160:three_prime_UTR
CGTGAGATTCTTCACATCCA+AGG 0.593333 1_1:-68694669 Msa0039160:CDS
GATGCTACTGCAGATGAAGA+GGG 0.594540 1_1:-68692182 Msa0039160:CDS
CAGTACCACCACCAAGGGAG+TGG 0.594965 1_1:+68693182 None:intergenic
GACTCCACCGGAAGGTACCA+AGG 0.596275 1_1:-68694582 Msa0039160:CDS
GTCCGGTGCCGGAAACAACT+GGG 0.596726 1_1:-68694391 Msa0039160:CDS
TGCGCTGCTGATCCTCGCCA+CGG 0.597098 1_1:-68692560 Msa0039160:CDS
TACCTTAGGAGATGGGAACA+CGG 0.597343 1_1:+68693087 None:intergenic
AAACATCTCCTGAATAGATG+TGG 0.598080 1_1:+68692349 None:intergenic
ACAGCATCTGCCATGTTCCG+TGG 0.598969 1_1:-68692527 Msa0039160:CDS
TGTCAGATACCTTAGGAGAT+GGG 0.602090 1_1:+68693080 None:intergenic
CAAAGACGAAGTTATCAGGC+CGG 0.603665 1_1:+68694418 None:intergenic
ACATGTAACACCACTCATTG+TGG 0.605465 1_1:+68692769 None:intergenic
GTTCCCTTGGTACCTTCCGG+TGG 0.611432 1_1:+68694578 None:intergenic
AGAACCAGTACCACCACCAA+GGG 0.618252 1_1:+68693177 None:intergenic
TATTCAGGAGATGTTTAGGA+GGG 0.623258 1_1:-68692342 Msa0039160:CDS
CACATCCAAGGAGGACAATG+CGG 0.623605 1_1:-68694657 Msa0039160:CDS
TGAGCTGACCCAGCAGATGT+GGG 0.624406 1_1:-68692600 Msa0039160:CDS
AAGTAAGCATCATTCGATCA+GGG 0.636592 1_1:+68693113 None:intergenic
ACCATGAAGAAATGCAAACG+AGG 0.637063 1_1:+68692680 None:intergenic
TGAGAATGCTGATGAATGCA+TGG 0.647401 1_1:-68693011 Msa0039160:CDS
AGAAGAAAGTGACTTTATAG+CGG 0.648023 1_1:+68694855 None:intergenic
GCTTGATGTTGTTAGGAAGG+AGG 0.649257 1_1:-68694325 Msa0039160:CDS
GCGAAAGGTCACTACACTGA+AGG 0.656934 1_1:-68694369 Msa0039160:CDS
GTGAACCACGAGAAGTGAGT+GGG 0.660953 1_1:+68692648 None:intergenic
TGGCGGGATATCACAGACAG+TGG 0.662431 1_1:+68692409 None:intergenic
CCATGAAGAAATGCAAACGA+GGG 0.665875 1_1:+68692681 None:intergenic
ACGGGATCGACTCCACCGGA+AGG 0.666784 1_1:-68694590 Msa0039160:CDS
TTTGATTTCTAAAATCAGGG+AGG 0.671547 1_1:-68693140 Msa0039160:CDS
CAGAACCAGTACCACCACCA+AGG 0.675091 1_1:+68693176 None:intergenic
ATGCTACTGCAGATGAAGAG+GGG 0.676889 1_1:-68692181 Msa0039160:CDS
TGTGAACCACGAGAAGTGAG+TGG 0.677800 1_1:+68692647 None:intergenic
ACTCCACCGGAAGGTACCAA+GGG 0.680036 1_1:-68694581 Msa0039160:CDS
GATCTGAGTTCAATTGACCA+GGG 0.680125 1_1:+68692735 None:intergenic
GGGATGTAACGGGTATGTGA+CGG 0.688890 1_1:+68694876 None:intergenic
TGGTAAAATGAGCACCAAGG+AGG 0.701716 1_1:-68692507 Msa0039160:CDS
TGAACCACGAGAAGTGAGTG+GGG 0.716024 1_1:+68692649 None:intergenic
ATGCTGTCAAATAACGACCG+TGG 0.720715 1_1:+68692543 None:intergenic
ATTGCTGGTACTCTGAGACA+AGG 0.726640 1_1:+68692210 None:intergenic
CCGTGGTAAAATGAGCACCA+AGG 0.726764 1_1:-68692510 Msa0039160:CDS
GAGATTCTTCACATCCAAGG+AGG 0.735981 1_1:-68694666 Msa0039160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAGTTATACAAGTTTTTA+AGG + chr1_1:68693104-68693123 None:intergenic 15.0%
!! AAAAACTTGTATAACTAATT+AGG - chr1_1:68693105-68693124 Msa0039160:CDS 15.0%
!! TATTACTAACACTTCAAAAT+GGG + chr1_1:68692877-68692896 None:intergenic 20.0%
!! TTATTACTAACACTTCAAAA+TGG + chr1_1:68692878-68692897 None:intergenic 20.0%
!!! TTGATAATCAGATTTGATAT+GGG - chr1_1:68693143-68693162 Msa0039160:CDS 20.0%
!! AAGTAAACAAAACAAAACAA+AGG + chr1_1:68693443-68693462 None:intergenic 20.0%
!!! TTGTTTTGTTTACTTGAATT+TGG - chr1_1:68693448-68693467 Msa0039160:intron 20.0%
!!! TGTTTTGTTTACTTGAATTT+GGG - chr1_1:68693449-68693468 Msa0039160:intron 20.0%
!!! ACTTTTGATTTCTAAAATCA+GGG - chr1_1:68693554-68693573 Msa0039160:intron 20.0%
!! ATTATTAGCAAAAACTTAAC+AGG + chr1_1:68693803-68693822 None:intergenic 20.0%
!! ATTTGACAACAAATGAAAAA+AGG + chr1_1:68694756-68694775 None:intergenic 20.0%
!! CATGAATAATATGGAAATAT+AGG + chr1_1:68694783-68694802 None:intergenic 20.0%
!! TTCCATATTATTCATGTTAA+TGG - chr1_1:68694787-68694806 Msa0039160:five_prime_UTR 20.0%
!! AACCATTAACATGAATAATA+TGG + chr1_1:68694792-68694811 None:intergenic 20.0%
!! ATATTATTCATGTTAATGGT+TGG - chr1_1:68694791-68694810 Msa0039160:five_prime_UTR 20.0%
! AAACAATTAGAAGCAGAAAT+CGG + chr1_1:68692434-68692453 None:intergenic 25.0%
!!! GTTGATAATCAGATTTGATA+TGG - chr1_1:68693142-68693161 Msa0039160:CDS 25.0%
!! ATTTGAAGTGCTATAGTAAT+AGG - chr1_1:68693195-68693214 Msa0039160:CDS 25.0%
! TCTATGTGTTGTGATAAATT+AGG - chr1_1:68693317-68693336 Msa0039160:intron 25.0%
! TTAGAAGTTGTGATATAACT+TGG - chr1_1:68693384-68693403 Msa0039160:intron 25.0%
!!! CACTTTTGATTTCTAAAATC+AGG - chr1_1:68693553-68693572 Msa0039160:intron 25.0%
!!! AAAATGGCTTCTACTTTTAT+TGG - chr1_1:68694320-68694339 Msa0039160:CDS 25.0%
AGAAGAAAGTGACTTTATAG+CGG + chr1_1:68691845-68691864 None:intergenic 30.0%
TCATTTCTCATAGAATTCTC+TGG - chr1_1:68691883-68691902 Msa0039160:three_prime_UTR 30.0%
ACACAAAAATTCCTAGATCA+AGG + chr1_1:68692644-68692663 None:intergenic 30.0%
ACAAGTTATTCAAAACACAG+TGG + chr1_1:68693263-68693282 None:intergenic 30.0%
! TTAGTATGTAAGAGCATGTT+TGG - chr1_1:68693292-68693311 Msa0039160:intron 30.0%
! TGAATTTGGGATTTCTAACA+TGG - chr1_1:68693462-68693481 Msa0039160:intron 30.0%
!! TTTGATTTCTAAAATCAGGG+AGG - chr1_1:68693557-68693576 Msa0039160:intron 30.0%
AACTTAACAGGCAAAAACAT+GGG + chr1_1:68693791-68693810 None:intergenic 30.0%
AAACTTAACAGGCAAAAACA+TGG + chr1_1:68693792-68693811 None:intergenic 30.0%
AGATCTGAACCATCTAATTT+CGG - chr1_1:68693905-68693924 Msa0039160:intron 30.0%
ATTCATCATACTTTGTTGAG+TGG - chr1_1:68694246-68694265 Msa0039160:intron 30.0%
! AATGCAAGAAAGCTTTTCTA+CGG + chr1_1:68694406-68694425 None:intergenic 30.0%
!! TTGTTTGCTATTGTAGTTTC+AGG - chr1_1:68694716-68694735 Msa0039160:five_prime_UTR 30.0%
TCTTAATCTTACAACTGAAC+TGG - chr1_1:68694861-68694880 Msa0039160:five_prime_UTR 30.0%
GAAGAAAGTGACTTTATAGC+GGG + chr1_1:68691844-68691863 None:intergenic 35.0%
! TGAGTTTGAAGAACGAGTTT+TGG + chr1_1:68691997-68692016 None:intergenic 35.0%
GAGAATTGTGATTGTCTTCA+AGG - chr1_1:68692397-68692416 Msa0039160:CDS 35.0%
!!! AGAGTTTTGAACCTTGATCT+AGG - chr1_1:68692943-68692962 Msa0039160:intron 35.0%
AATCAGATTTGATATGGGAG+TGG - chr1_1:68693148-68693167 Msa0039160:CDS 35.0%
TGATATAACTTGGACGTGTA+TGG - chr1_1:68693394-68693413 Msa0039160:intron 35.0%
! CATGGTTTTCAGAATCTTTC+AGG - chr1_1:68693480-68693499 Msa0039160:intron 35.0%
!!! TCAGAATCTTTCAGGTTTTC+AGG - chr1_1:68693488-68693507 Msa0039160:intron 35.0%
AAGTAAGCATCATTCGATCA+GGG + chr1_1:68693587-68693606 None:intergenic 35.0%
AAAGTAAGCATCATTCGATC+AGG + chr1_1:68693588-68693607 None:intergenic 35.0%
ATTATGATGAACTCACAGCT+TGG + chr1_1:68693768-68693787 None:intergenic 35.0%
! AAATTGAGCCTTGTGTTGTT+TGG - chr1_1:68693872-68693891 Msa0039160:intron 35.0%
! ACAGTGGATTTCACATTGTT+GGG + chr1_1:68694275-68694294 None:intergenic 35.0%
AAACATCTCCTGAATAGATG+TGG + chr1_1:68694351-68694370 None:intergenic 35.0%
CATCTATTCAGGAGATGTTT+AGG - chr1_1:68694351-68694370 Msa0039160:CDS 35.0%
TATTCAGGAGATGTTTAGGA+GGG - chr1_1:68694355-68694374 Msa0039160:CDS 35.0%
GTAGAAAAGCTTTCTTGCAT+TGG - chr1_1:68694405-68694424 Msa0039160:CDS 35.0%
ACAGTAGTATTGTGATGTGA+AGG - chr1_1:68694587-68694606 Msa0039160:CDS 35.0%
CAGTAGTATTGTGATGTGAA+GGG - chr1_1:68694588-68694607 Msa0039160:CDS 35.0%
!! GAAAAAGGTATTCAGGTTTG+GGG + chr1_1:68694680-68694699 None:intergenic 35.0%
!! CGAAAAAGGTATTCAGGTTT+GGG + chr1_1:68694681-68694700 None:intergenic 35.0%
! CCAAACCTGAATACCTTTTT+CGG - chr1_1:68694679-68694698 Msa0039160:exon 35.0%
! CAAACCTGAATACCTTTTTC+GGG - chr1_1:68694680-68694699 Msa0039160:exon 35.0%
!! AAACCTGAATACCTTTTTCG+GGG - chr1_1:68694681-68694700 Msa0039160:exon 35.0%
! ACTTTATAGCGGGATGTAAC+GGG + chr1_1:68691834-68691853 None:intergenic 40.0%
! GACTTTATAGCGGGATGTAA+CGG + chr1_1:68691835-68691854 None:intergenic 40.0%
TGTCCAAAGACGAAGTTATC+AGG + chr1_1:68692286-68692305 None:intergenic 40.0%
!! AGGAGCTGAGTTGATTGATT+CGG - chr1_1:68692348-68692367 Msa0039160:CDS 40.0%
!! ATTCGGTGCTTGATGTTGTT+AGG - chr1_1:68692365-68692384 Msa0039160:CDS 40.0%
GCACAGAAATTCCTAGATCA+AGG + chr1_1:68692957-68692976 None:intergenic 40.0%
TGTCAGATACCTTAGGAGAT+GGG + chr1_1:68693620-68693639 None:intergenic 40.0%
ACAACAGTGTCAGATACCTT+AGG + chr1_1:68693627-68693646 None:intergenic 40.0%
CATCAGCATTCTCAACAAGT+TGG + chr1_1:68693680-68693699 None:intergenic 40.0%
TGAGAATGCTGATGAATGCA+TGG - chr1_1:68693686-68693705 Msa0039160:intron 40.0%
GCTTGGAGTAGTGAGTTTAA+GGG + chr1_1:68693751-68693770 None:intergenic 40.0%
AGCTTGGAGTAGTGAGTTTA+AGG + chr1_1:68693752-68693771 None:intergenic 40.0%
AACTGCAACCAAACAACACA+AGG + chr1_1:68693883-68693902 None:intergenic 40.0%
!! TTGTGTTGTTTGGTTGCAGT+TGG - chr1_1:68693882-68693901 Msa0039160:intron 40.0%
TCATTGTGGCCGAAATTAGA+TGG + chr1_1:68693917-68693936 None:intergenic 40.0%
ACATGTAACACCACTCATTG+TGG + chr1_1:68693931-68693950 None:intergenic 40.0%
GATCTGAGTTCAATTGACCA+GGG + chr1_1:68693965-68693984 None:intergenic 40.0%
AGATCTGAGTTCAATTGACC+AGG + chr1_1:68693966-68693985 None:intergenic 40.0%
GAACTCAGATCTTCGCAAAT+TGG - chr1_1:68693974-68693993 Msa0039160:intron 40.0%
AAGAAATGCAAACGAGGGAA+AGG + chr1_1:68694014-68694033 None:intergenic 40.0%
CCATGAAGAAATGCAAACGA+GGG + chr1_1:68694019-68694038 None:intergenic 40.0%
ACCATGAAGAAATGCAAACG+AGG + chr1_1:68694020-68694039 None:intergenic 40.0%
TCGTTTGCATTTCTTCATGG+TGG - chr1_1:68694019-68694038 Msa0039160:intron 40.0%
CGTTTGCATTTCTTCATGGT+GGG - chr1_1:68694020-68694039 Msa0039160:intron 40.0%
! GACAGTGGATTTCACATTGT+TGG + chr1_1:68694276-68694295 None:intergenic 40.0%
!!! GAAGCCATTTTAAGACCAGT+TGG + chr1_1:68694311-68694330 None:intergenic 40.0%
TGGTAACTCCACATCTATTC+AGG - chr1_1:68694340-68694359 Msa0039160:CDS 40.0%
CTATTCAGGAGATGTTTAGG+AGG - chr1_1:68694354-68694373 Msa0039160:CDS 40.0%
! GAAAGCTTTTCTACGGAACA+TGG + chr1_1:68694399-68694418 None:intergenic 40.0%
! GCTTTCTTGCATTGGTATAC+TGG - chr1_1:68694413-68694432 Msa0039160:CDS 40.0%
! TTGCATTGGTATACTGGAGA+GGG - chr1_1:68694419-68694438 Msa0039160:CDS 40.0%
GTATGACTATGAAGATGAGG+AGG - chr1_1:68694538-68694557 Msa0039160:CDS 40.0%
!! CCGAAAAAGGTATTCAGGTT+TGG + chr1_1:68694682-68694701 None:intergenic 40.0%
!!! AACCTGAATACCTTTTTCGG+GGG - chr1_1:68694682-68694701 Msa0039160:exon 40.0%
AGAGAGAGAGAGAGAGAAGA+AGG + chr1_1:68691918-68691937 None:intergenic 45.0%
TCTCTCTCTCGAACTCGTTA+CGG - chr1_1:68691951-68691970 Msa0039160:three_prime_UTR 45.0%
!!! CGAGTTTTGGAGTGAGAAAG+TGG + chr1_1:68691984-68692003 None:intergenic 45.0%
CGTGAGATTCTTCACATCCA+AGG - chr1_1:68692028-68692047 Msa0039160:three_prime_UTR 45.0%
GAGATTCTTCACATCCAAGG+AGG - chr1_1:68692031-68692050 Msa0039160:three_prime_UTR 45.0%
ACCAAATCGGAGCCAAATTC+TGG - chr1_1:68692065-68692084 Msa0039160:three_prime_UTR 45.0%
CCAAATCGGAGCCAAATTCT+GGG - chr1_1:68692066-68692085 Msa0039160:three_prime_UTR 45.0%
GCACACAACTTCCCAGAATT+TGG + chr1_1:68692080-68692099 None:intergenic 45.0%
GTTGAAGATCGTTGTTCCCT+TGG + chr1_1:68692135-68692154 None:intergenic 45.0%
TACTACAACGAAGCGAGTTG+TGG - chr1_1:68692172-68692191 Msa0039160:CDS 45.0%
AGATCCATGAGAACAGCTCT+AGG + chr1_1:68692208-68692227 None:intergenic 45.0%
TAGAGCTGTTCTCATGGATC+TGG - chr1_1:68692207-68692226 Msa0039160:CDS 45.0%
! GTCCATACGGTCAGATTTTC+CGG - chr1_1:68692260-68692279 Msa0039160:CDS 45.0%
CAAAGACGAAGTTATCAGGC+CGG + chr1_1:68692282-68692301 None:intergenic 45.0%
AACTTCGTCTTTGGACAGTC+CGG - chr1_1:68692289-68692308 Msa0039160:CDS 45.0%
GGTGCTTGATGTTGTTAGGA+AGG - chr1_1:68692369-68692388 Msa0039160:CDS 45.0%
GCTTGATGTTGTTAGGAAGG+AGG - chr1_1:68692372-68692391 Msa0039160:CDS 45.0%
AGAGAATCGAGCCTTGATCT+AGG - chr1_1:68692630-68692649 Msa0039160:CDS 45.0%
TACCTTAGGAGATGGGAACA+CGG + chr1_1:68693613-68693632 None:intergenic 45.0%
GTGTCAGATACCTTAGGAGA+TGG + chr1_1:68693621-68693640 None:intergenic 45.0%
! ACAGAGAGTGTAGCGTTGTA+AGG + chr1_1:68693654-68693673 None:intergenic 45.0%
! CAGCATTCTCAACAAGTTGG+TGG + chr1_1:68693677-68693696 None:intergenic 45.0%
TGCTGATGAATGCATGGTTC+TGG - chr1_1:68693692-68693711 Msa0039160:intron 45.0%
GAGTAGTGAGTTTAAGGGTG+CGG + chr1_1:68693746-68693765 None:intergenic 45.0%
CTAATTTCGGCCACAATGAG+TGG - chr1_1:68693918-68693937 Msa0039160:intron 45.0%
ACATGTTGTCTTCGATTCCC+TGG - chr1_1:68693945-68693964 Msa0039160:intron 45.0%
CCCTCGTTTGCATTTCTTCA+TGG - chr1_1:68694016-68694035 Msa0039160:intron 45.0%
ATGCTGTCAAATAACGACCG+TGG + chr1_1:68694157-68694176 None:intergenic 45.0%
! GCTCATTTTACCACGGAACA+TGG + chr1_1:68694183-68694202 None:intergenic 45.0%
!!! CCTTGGTGCTCATTTTACCA+CGG + chr1_1:68694190-68694209 None:intergenic 45.0%
TGGTAAAATGAGCACCAAGG+AGG - chr1_1:68694190-68694209 Msa0039160:intron 45.0%
!!! CCATTTTAAGACCAGTTGGC+GGG + chr1_1:68694307-68694326 None:intergenic 45.0%
!!! GCCATTTTAAGACCAGTTGG+CGG + chr1_1:68694308-68694327 None:intergenic 45.0%
! CTTGCATTGGTATACTGGAG+AGG - chr1_1:68694418-68694437 Msa0039160:CDS 45.0%
TTGGTATACTGGAGAGGGTA+TGG - chr1_1:68694424-68694443 Msa0039160:CDS 45.0%
!! ATTGCTGGTACTCTGAGACA+AGG + chr1_1:68694490-68694509 None:intergenic 45.0%
CAGTAGCATCTTGGTATTGC+TGG + chr1_1:68694505-68694524 None:intergenic 45.0%
CTTCATCTGCAGTAGCATCT+TGG + chr1_1:68694514-68694533 None:intergenic 45.0%
AGATGCTACTGCAGATGAAG+AGG - chr1_1:68694514-68694533 Msa0039160:CDS 45.0%
GATGCTACTGCAGATGAAGA+GGG - chr1_1:68694515-68694534 Msa0039160:CDS 45.0%
ATGCTACTGCAGATGAAGAG+GGG - chr1_1:68694516-68694535 Msa0039160:CDS 45.0%
GGGGTATGACTATGAAGATG+AGG - chr1_1:68694535-68694554 Msa0039160:CDS 45.0%
AGATGAGGAGGAAGAAGTTC+AGG - chr1_1:68694550-68694569 Msa0039160:CDS 45.0%
!! TACCCCCGAAAAAGGTATTC+AGG + chr1_1:68694687-68694706 None:intergenic 45.0%
!!! AATACCTTTTTCGGGGGTAC+TGG - chr1_1:68694688-68694707 Msa0039160:exon 45.0%
AAATCCAGTACCCCCGAAAA+AGG + chr1_1:68694695-68694714 None:intergenic 45.0%
!! GGGATGTAACGGGTATGTGA+CGG + chr1_1:68691824-68691843 None:intergenic 50.0%
CACATCCAAGGAGGACAATG+CGG - chr1_1:68692040-68692059 Msa0039160:three_prime_UTR 50.0%
ACATCCAAGGAGGACAATGC+GGG - chr1_1:68692041-68692060 Msa0039160:three_prime_UTR 50.0%
GGACAATGCGGGAACCAAAT+CGG - chr1_1:68692052-68692071 Msa0039160:three_prime_UTR 50.0%
! CCCAGAATTTGGCTCCGATT+TGG + chr1_1:68692069-68692088 None:intergenic 50.0%
GTTGTTCCCTTGGTACCTTC+CGG + chr1_1:68692125-68692144 None:intergenic 50.0%
CGTTCCTAGAGCTGTTCTCA+TGG - chr1_1:68692201-68692220 Msa0039160:CDS 50.0%
! TTCTCATGGATCTGGAGCCA+GGG - chr1_1:68692215-68692234 Msa0039160:CDS 50.0%
ACTATGGACAGCGTCAGATC+TGG - chr1_1:68692238-68692257 Msa0039160:CDS 50.0%
AGCGTCAGATCTGGTCCATA+CGG - chr1_1:68692247-68692266 Msa0039160:CDS 50.0%
CGGCCTGATAACTTCGTCTT+TGG - chr1_1:68692280-68692299 Msa0039160:CDS 50.0%
! ACCTTTCGCCCAGTTGTTTC+CGG + chr1_1:68692317-68692336 None:intergenic 50.0%
GCGAAAGGTCACTACACTGA+AGG - chr1_1:68692328-68692347 Msa0039160:CDS 50.0%
!! TTTCAGGTTTGCCACTCCCT+TGG - chr1_1:68693504-68693523 Msa0039160:intron 50.0%
AGAACCAGTACCACCACCAA+GGG + chr1_1:68693523-68693542 None:intergenic 50.0%
!! TGGTGGTACTGGTTCTGGAA+TGG - chr1_1:68693527-68693546 Msa0039160:intron 50.0%
!! GGTGGTACTGGTTCTGGAAT+GGG - chr1_1:68693528-68693547 Msa0039160:intron 50.0%
TGAACCACGAGAAGTGAGTG+GGG + chr1_1:68694051-68694070 None:intergenic 50.0%
GTGAACCACGAGAAGTGAGT+GGG + chr1_1:68694052-68694071 None:intergenic 50.0%
TGTGAACCACGAGAAGTGAG+TGG + chr1_1:68694053-68694072 None:intergenic 50.0%
TCGTGGTTCACAGCAGTACA+GGG - chr1_1:68694061-68694080 Msa0039160:intron 50.0%
CTTCGAATCCCACATCTGCT+GGG + chr1_1:68694108-68694127 None:intergenic 50.0%
TCTTCGAATCCCACATCTGC+TGG + chr1_1:68694109-68694128 None:intergenic 50.0%
CCGTGGTAAAATGAGCACCA+AGG - chr1_1:68694187-68694206 Msa0039160:intron 50.0%
CATCTGCTCATCAACCTCCT+TGG + chr1_1:68694207-68694226 None:intergenic 50.0%
!! CCCGCCAACTGGTCTTAAAA+TGG - chr1_1:68694304-68694323 Msa0039160:CDS 50.0%
GAGGGTGAGTGAGCAATTCA+CGG - chr1_1:68694373-68694392 Msa0039160:CDS 50.0%
! TGGAGAGGGTATGGATGAGA+TGG - chr1_1:68694433-68694452 Msa0039160:CDS 50.0%
TGAGGAGGAAGAAGTTCAGG+AGG - chr1_1:68694553-68694572 Msa0039160:CDS 50.0%
GAAGTTGTGTGCGCTGAGCA+CGG - chr1_1:68692088-68692107 Msa0039160:three_prime_UTR 55.0%
AAGTTGTGTGCGCTGAGCAC+GGG - chr1_1:68692089-68692108 Msa0039160:three_prime_UTR 55.0%
!! ACTCCACCGGAAGGTACCAA+GGG - chr1_1:68692116-68692135 Msa0039160:exon 55.0%
! GTTCTCATGGATCTGGAGCC+AGG - chr1_1:68692214-68692233 Msa0039160:CDS 55.0%
GGCCGGAAAATCTGACCGTA+TGG + chr1_1:68692265-68692284 None:intergenic 55.0%
CAGAACCAGTACCACCACCA+AGG + chr1_1:68693524-68693543 None:intergenic 55.0%
!! CTTGGTGGTGGTACTGGTTC+TGG - chr1_1:68693522-68693541 Msa0039160:intron 55.0%
CTCCGTGTTCCCATCTCCTA+AGG - chr1_1:68693608-68693627 Msa0039160:intron 55.0%
TTTGCCCCACTCACTTCTCG+TGG - chr1_1:68694044-68694063 Msa0039160:intron 55.0%
CTCGTGGTTCACAGCAGTAC+AGG - chr1_1:68694060-68694079 Msa0039160:intron 55.0%
TGAGCTGACCCAGCAGATGT+GGG - chr1_1:68694097-68694116 Msa0039160:intron 55.0%
GTCAAATAACGACCGTGGCG+AGG + chr1_1:68694152-68694171 None:intergenic 55.0%
ACAGCATCTGCCATGTTCCG+TGG - chr1_1:68694170-68694189 Msa0039160:intron 55.0%
TGGCGGGATATCACAGACAG+TGG + chr1_1:68694291-68694310 None:intergenic 55.0%
GTCTGTGATATCCCGCCAAC+TGG - chr1_1:68694293-68694312 Msa0039160:intron 55.0%
GGTTCCCGCATTGTCCTCCT+TGG + chr1_1:68692048-68692067 None:intergenic 60.0%
!! GACTCCACCGGAAGGTACCA+AGG - chr1_1:68692115-68692134 Msa0039160:exon 60.0%
GTTCCCTTGGTACCTTCCGG+TGG + chr1_1:68692122-68692141 None:intergenic 60.0%
! GGATCTGGAGCCAGGGACTA+TGG - chr1_1:68692222-68692241 Msa0039160:CDS 60.0%
CTGACGCTGTCCATAGTCCC+TGG + chr1_1:68692235-68692254 None:intergenic 60.0%
GTCTTTGGACAGTCCGGTGC+CGG - chr1_1:68692295-68692314 Msa0039160:CDS 60.0%
! AGTCCGGTGCCGGAAACAAC+TGG - chr1_1:68692305-68692324 Msa0039160:CDS 60.0%
! GTCCGGTGCCGGAAACAACT+GGG - chr1_1:68692306-68692325 Msa0039160:CDS 60.0%
GCCGGAAACAACTGGGCGAA+AGG - chr1_1:68692313-68692332 Msa0039160:CDS 60.0%
CAGGTTTGCCACTCCCTTGG+TGG - chr1_1:68693507-68693526 Msa0039160:intron 60.0%
GTTTGCCACTCCCTTGGTGG+TGG - chr1_1:68693510-68693529 Msa0039160:intron 60.0%
CAGTACCACCACCAAGGGAG+TGG + chr1_1:68693518-68693537 None:intergenic 60.0%
!! CACTCCCTTGGTGGTGGTAC+TGG - chr1_1:68693516-68693535 Msa0039160:intron 60.0%
CACATCTGCTGGGTCAGCTC+AGG + chr1_1:68694098-68694117 None:intergenic 60.0%
CTGAGCTGACCCAGCAGATG+TGG - chr1_1:68694096-68694115 Msa0039160:intron 60.0%
! GAGCACGGGATCGACTCCAC+CGG - chr1_1:68692103-68692122 Msa0039160:three_prime_UTR 65.0%
! ACGGGATCGACTCCACCGGA+AGG - chr1_1:68692107-68692126 Msa0039160:three_prime_UTR 65.0%
! CGCCCAGTTGTTTCCGGCAC+CGG + chr1_1:68692311-68692330 None:intergenic 65.0%
TGCGCTGCTGATCCTCGCCA+CGG - chr1_1:68694137-68694156 Msa0039160:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 68691820 68694899 68691820 ID=Msa0039160;Name=Msa0039160
chr1_1 mRNA 68691820 68694899 68691820 ID=Msa0039160-mRNA-1;Parent=Msa0039160;Name=Msa0039160-mRNA-1;_AED=0.03;_eAED=0.03;_QI=205|1|1|1|1|1|3|313|449
chr1_1 exon 68691820 68692818 68691820 ID=Msa0039160-mRNA-1:exon:22490;Parent=Msa0039160-mRNA-1
chr1_1 exon 68692948 68693217 68692948 ID=Msa0039160-mRNA-1:exon:22489;Parent=Msa0039160-mRNA-1
chr1_1 exon 68694301 68694899 68694301 ID=Msa0039160-mRNA-1:exon:22488;Parent=Msa0039160-mRNA-1
chr1_1 five_prime_UTR 68694695 68694899 68694695 ID=Msa0039160-mRNA-1:five_prime_utr;Parent=Msa0039160-mRNA-1
chr1_1 CDS 68694301 68694694 68694301 ID=Msa0039160-mRNA-1:cds;Parent=Msa0039160-mRNA-1
chr1_1 CDS 68692948 68693217 68692948 ID=Msa0039160-mRNA-1:cds;Parent=Msa0039160-mRNA-1
chr1_1 CDS 68692133 68692818 68692133 ID=Msa0039160-mRNA-1:cds;Parent=Msa0039160-mRNA-1
chr1_1 three_prime_UTR 68691820 68692132 68691820 ID=Msa0039160-mRNA-1:three_prime_utr;Parent=Msa0039160-mRNA-1
Gene Sequence

>Msa0039160

ATGCGTGAGATTCTTCACATCCAAGGAGGACAATGCGGGAACCAAATCGGAGCCAAATTCTGGGAAGTTGTGTGCGCTGAGCACGGGATCGACTCCACCGGAAGGTACCAAGGGAACAACGATCTTCAACTTGAACGAGTCAATGTGTACTACAACGAAGCGAGTTGTGGAAGATTCGTTCCTAGAGCTGTTCTCATGGATCTGGAGCCAGGGACTATGGACAGCGTCAGATCTGGTCCATACGGTCAGATTTTCCGGCCTGATAACTTCGTCTTTGGACAGTCCGGTGCCGGAAACAACTGGGCGAAAGGTCACTACACTGAAGGAGCTGAGTTGATTGATTCGGTGCTTGATGTTGTTAGGAAGGAGGCTGAGAATTGTGATTGTCTTCAAGGTTTTCAGGTTTGCCACTCCCTTGGTGGTGGTACTGGTTCTGGAATGGGAACACTTTTGATTTCTAAAATCAGGGAGGAATACCCTGATCGAATGATGCTTACTTTCTCCGTGTTCCCATCTCCTAAGGTATCTGACACTGTTGTTGAACCTTACAACGCTACACTCTCTGTCCACCAACTTGTTGAGAATGCTGATGAATGCATGGTTCTGGATAATGAAGCTCTCTATGATATTTGCTTCCGCACCCTTAAACTCACTACTCCAAGCTTTGGAGATCTGAACCATCTAATTTCGGCCACAATGAGTGGTGTTACATGTTGTCTTCGATTCCCTGGTCAATTGAACTCAGATCTTCGCAAATTGGCAGTCAATCTCATTCCTTTCCCTCGTTTGCATTTCTTCATGGTGGGATTTGCCCCACTCACTTCTCGTGGTTCACAGCAGTACAGGGCTCTTACTGTACCTGAGCTGACCCAGCAGATGTGGGATTCGAAGAACATGATGTGCGCTGCTGATCCTCGCCACGGTCGTTATTTGACAGCATCTGCCATGTTCCGTGGTAAAATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTTCAGAACAAGAATTCATCATACTTTGTTGAGTGGATTCCCAACAATGTGAAATCCACTGTCTGTGATATCCCGCCAACTGGTCTTAAAATGGCTTCTACTTTTATTGGTAACTCCACATCTATTCAGGAGATGTTTAGGAGGGTGAGTGAGCAATTCACGGCCATGTTCCGTAGAAAAGCTTTCTTGCATTGGTATACTGGAGAGGGTATGGATGAGATGGAGTTTACTGAAGCAGAAAGCAACATGAATGACCTTGTCTCAGAGTACCAGCAATACCAAGATGCTACTGCAGATGAAGAGGGGTATGACTATGAAGATGAGGAGGAAGAAGTTCAGGAGGAAGAAGCTTAA
Protein sequence

>Msa0039160

MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGNNDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGYDYEDEEEEVQEEEA*