Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428000 | XP_003592284.1 | 100.000 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428000 | sp|P29516|TBB8_ARATH | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428000 | G7IAN2 | 100.000 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 0.0 | 946 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa1428000 | 0.859507 | 3.943331e-63 | -8.615850e-47 |
| Msa0018920 | Msa1428000 | 0.816062 | 6.712611e-52 | -8.615850e-47 |
| Msa0020540 | Msa1428000 | 0.832421 | 9.547137e-56 | -8.615850e-47 |
| Msa0027800 | Msa1428000 | 0.836028 | 1.189573e-56 | -8.615850e-47 |
| Msa0032980 | Msa1428000 | 0.833676 | 4.650404e-56 | -8.615850e-47 |
| Msa0039160 | Msa1428000 | 0.898204 | 6.668227e-77 | -8.615850e-47 |
| Msa0040640 | Msa1428000 | 0.842794 | 2.080373e-58 | -8.615850e-47 |
| Msa0050150 | Msa1428000 | 0.814012 | 1.913283e-51 | -8.615850e-47 |
| Msa0062340 | Msa1428000 | 0.835188 | 1.940545e-56 | -8.615850e-47 |
| Msa0067380 | Msa1428000 | 0.828060 | 1.109109e-54 | -8.615850e-47 |
| Msa0072520 | Msa1428000 | 0.839213 | 1.812626e-57 | -8.615850e-47 |
| Msa0075530 | Msa1428000 | 0.801289 | 9.659028e-49 | -8.615850e-47 |
| Msa0078130 | Msa1428000 | 0.834563 | 2.788943e-56 | -8.615850e-47 |
| Msa0080440 | Msa1428000 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0084990 | Msa1428000 | 0.826140 | 3.194979e-54 | -8.615850e-47 |
| Msa0090440 | Msa1428000 | 0.804791 | 1.822831e-49 | -8.615850e-47 |
| Msa0091350 | Msa1428000 | 0.830491 | 2.850982e-55 | -8.615850e-47 |
| Msa0100600 | Msa1428000 | 0.813524 | 2.449923e-51 | -8.615850e-47 |
| Msa0106630 | Msa1428000 | 0.813988 | 1.936954e-51 | -8.615850e-47 |
| Msa0109730 | Msa1428000 | 0.834340 | 3.171963e-56 | -8.615850e-47 |
| Msa0110200 | Msa1428000 | 0.818966 | 1.487644e-52 | -8.615850e-47 |
| Msa0113410 | Msa1428000 | 0.802361 | 5.818036e-49 | -8.615850e-47 |
| Msa1361930 | Msa1428000 | 0.855055 | 8.155422e-62 | -8.615850e-47 |
| Msa1364680 | Msa1428000 | 0.805402 | 1.358351e-49 | -8.615850e-47 |
| Msa1365500 | Msa1428000 | 0.822675 | 2.086940e-53 | -8.615850e-47 |
| Msa1366150 | Msa1428000 | 0.812962 | 3.255305e-51 | -8.615850e-47 |
| Msa1367180 | Msa1428000 | 0.803044 | 4.206575e-49 | -8.615850e-47 |
| Msa1368990 | Msa1428000 | 0.822434 | 2.373617e-53 | -8.615850e-47 |
| Msa1375350 | Msa1428000 | 0.824737 | 6.863159e-54 | -8.615850e-47 |
| Msa1381470 | Msa1428000 | 0.823608 | 1.263641e-53 | -8.615850e-47 |
| Msa1381800 | Msa1428000 | 0.815918 | 7.225913e-52 | -8.615850e-47 |
| Msa1385570 | Msa1428000 | 0.812743 | 3.636509e-51 | -8.615850e-47 |
| Msa1387440 | Msa1428000 | 0.802445 | 5.591898e-49 | -8.615850e-47 |
| Msa1387500 | Msa1428000 | 0.847702 | 9.784047e-60 | -8.615850e-47 |
| Msa1389310 | Msa1428000 | 0.802729 | 4.886663e-49 | -8.615850e-47 |
| Msa1389820 | Msa1428000 | 0.816358 | 5.763654e-52 | -8.615850e-47 |
| Msa1390210 | Msa1428000 | 0.814100 | 1.829180e-51 | -8.615850e-47 |
| Msa1393560 | Msa1428000 | 0.849283 | 3.571828e-60 | -8.615850e-47 |
| Msa1399190 | Msa1428000 | 0.815205 | 1.041560e-51 | -8.615850e-47 |
| Msa1406720 | Msa1428000 | 0.849025 | 4.214622e-60 | -8.615850e-47 |
| Msa1426320 | Msa1428000 | 0.831713 | 1.427939e-55 | -8.615850e-47 |
| Msa1428000 | Msa1432520 | 0.804408 | 2.191222e-49 | -8.615850e-47 |
| Msa1428000 | Msa1436620 | 0.806540 | 7.827971e-50 | -8.615850e-47 |
| Msa1428000 | Msa1439730 | 0.800586 | 1.344651e-48 | -8.615850e-47 |
| Msa1428000 | Msa1457840 | 0.855612 | 5.613853e-62 | -8.615850e-47 |
| Msa1428000 | Msa1459010 | 0.821748 | 3.423438e-53 | -8.615850e-47 |
| Msa0607800 | Msa1428000 | 0.855151 | 7.647256e-62 | -8.615850e-47 |
| Msa0608350 | Msa1428000 | 0.818455 | 1.943323e-52 | -8.615850e-47 |
| Msa0615630 | Msa1428000 | 0.856598 | 2.887036e-62 | -8.615850e-47 |
| Msa0619710 | Msa1428000 | 0.801042 | 1.084919e-48 | -8.615850e-47 |
| Msa0620500 | Msa1428000 | 0.867846 | 1.012714e-65 | -8.615850e-47 |
| Msa0620510 | Msa1428000 | 0.801522 | 8.654763e-49 | -8.615850e-47 |
| Msa0625620 | Msa1428000 | 0.836465 | 9.209377e-57 | -8.615850e-47 |
| Msa0630440 | Msa1428000 | 0.816462 | 5.462398e-52 | -8.615850e-47 |
| Msa0640800 | Msa1428000 | 0.833160 | 6.254006e-56 | -8.615850e-47 |
| Msa0645340 | Msa1428000 | 0.837369 | 5.415224e-57 | -8.615850e-47 |
| Msa0647050 | Msa1428000 | 0.818055 | 2.393041e-52 | -8.615850e-47 |
| Msa0647440 | Msa1428000 | 0.844711 | 6.382940e-59 | -8.615850e-47 |
| Msa0648040 | Msa1428000 | 0.849925 | 2.363709e-60 | -8.615850e-47 |
| Msa0648760 | Msa1428000 | 0.843169 | 1.653045e-58 | -8.615850e-47 |
| Msa0654740 | Msa1428000 | 0.840570 | 8.031133e-58 | -8.615850e-47 |
| Msa0657210 | Msa1428000 | 0.821112 | 4.800040e-53 | -8.615850e-47 |
| Msa0663290 | Msa1428000 | 0.831011 | 2.125040e-55 | -8.615850e-47 |
| Msa0664070 | Msa1428000 | 0.830619 | 2.651981e-55 | -8.615850e-47 |
| Msa0668900 | Msa1428000 | 0.825304 | 5.042743e-54 | -8.615850e-47 |
| Msa0675350 | Msa1428000 | 0.961696 | 5.295578e-120 | -8.615850e-47 |
| Msa0681050 | Msa1428000 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0687090 | Msa1428000 | 0.851123 | 1.089150e-60 | -8.615850e-47 |
| Msa0687370 | Msa1428000 | 0.802832 | 4.652543e-49 | -8.615850e-47 |
| Msa0688380 | Msa1428000 | 0.839982 | 1.143743e-57 | -8.615850e-47 |
| Msa0688620 | Msa1428000 | 0.814961 | 1.179974e-51 | -8.615850e-47 |
| Msa0690320 | Msa1428000 | 0.830890 | 2.276429e-55 | -8.615850e-47 |
| Msa0690740 | Msa1428000 | 0.855858 | 4.757496e-62 | -8.615850e-47 |
| Msa0691270 | Msa1428000 | 0.822698 | 2.060906e-53 | -8.615850e-47 |
| Msa0698730 | Msa1428000 | 0.810564 | 1.082550e-50 | -8.615850e-47 |
| Msa0701250 | Msa1428000 | 0.829473 | 5.048833e-55 | -8.615850e-47 |
| Msa0705180 | Msa1428000 | 0.802751 | 4.834379e-49 | -8.615850e-47 |
| Msa0706150 | Msa1428000 | 0.801382 | 9.243373e-49 | -8.615850e-47 |
| Msa0707260 | Msa1428000 | 0.841453 | 4.707964e-58 | -8.615850e-47 |
| Msa0713920 | Msa1428000 | 0.800154 | 1.646087e-48 | -8.615850e-47 |
| Msa0714520 | Msa1428000 | 0.800320 | 1.523518e-48 | -8.615850e-47 |
| Msa0714790 | Msa1428000 | 0.801512 | 8.695588e-49 | -8.615850e-47 |
| Msa0717900 | Msa1428000 | 0.839546 | 1.485026e-57 | -8.615850e-47 |
| Msa0720280 | Msa1428000 | 0.843553 | 1.305274e-58 | -8.615850e-47 |
| Msa0736890 | Msa1428000 | 0.800708 | 1.269594e-48 | -8.615850e-47 |
| Msa0737020 | Msa1428000 | 0.811741 | 6.015596e-51 | -8.615850e-47 |
| Msa0743440 | Msa1428000 | 0.822563 | 2.215869e-53 | -8.615850e-47 |
| Msa0749190 | Msa1428000 | 0.814242 | 1.702588e-51 | -8.615850e-47 |
| Msa0750520 | Msa1428000 | 0.820327 | 7.274275e-53 | -8.615850e-47 |
| Msa0751720 | Msa1428000 | 0.800806 | 1.212726e-48 | -8.615850e-47 |
| Msa0756820 | Msa1428000 | 0.815855 | 7.466016e-52 | -8.615850e-47 |
| Msa0778600 | Msa1428000 | 0.826774 | 2.255242e-54 | -8.615850e-47 |
| Msa0780910 | Msa1428000 | 0.826487 | 2.640161e-54 | -8.615850e-47 |
| Msa0800660 | Msa1428000 | 0.822725 | 2.031602e-53 | -8.615850e-47 |
| Msa0803140 | Msa1428000 | 0.845573 | 3.732095e-59 | -8.615850e-47 |
| Msa0816080 | Msa1428000 | 0.837395 | 5.332777e-57 | -8.615850e-47 |
| Msa0818130 | Msa1428000 | 0.810301 | 1.233846e-50 | -8.615850e-47 |
| Msa0818150 | Msa1428000 | 0.807610 | 4.647005e-50 | -8.615850e-47 |
| Msa0821160 | Msa1428000 | 0.817182 | 3.764908e-52 | -8.615850e-47 |
| Msa0837680 | Msa1428000 | 0.832258 | 1.047289e-55 | -8.615850e-47 |
| Msa0840520 | Msa1428000 | 0.804924 | 1.710147e-49 | -8.615850e-47 |
| Msa0841500 | Msa1428000 | 0.825242 | 5.215105e-54 | -8.615850e-47 |
| Msa0120790 | Msa1428000 | 0.826556 | 2.542544e-54 | -8.615850e-47 |
| Msa0125590 | Msa1428000 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
| Msa0127340 | Msa1428000 | 0.820588 | 6.337171e-53 | -8.615850e-47 |
| Msa0133620 | Msa1428000 | 0.897476 | 1.354597e-76 | -8.615850e-47 |
| Msa0140130 | Msa1428000 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
| Msa0153210 | Msa1428000 | 0.815144 | 1.074418e-51 | -8.615850e-47 |
| Msa0156050 | Msa1428000 | 0.832254 | 1.049958e-55 | -8.615850e-47 |
| Msa0156090 | Msa1428000 | 0.838717 | 2.435636e-57 | -8.615850e-47 |
| Msa0158900 | Msa1428000 | 0.833352 | 5.604044e-56 | -8.615850e-47 |
| Msa0159590 | Msa1428000 | 0.829939 | 3.887858e-55 | -8.615850e-47 |
| Msa0159620 | Msa1428000 | 0.817974 | 2.496046e-52 | -8.615850e-47 |
| Msa0165830 | Msa1428000 | 0.824084 | 9.774926e-54 | -8.615850e-47 |
| Msa0168050 | Msa1428000 | 0.822514 | 2.274499e-53 | -8.615850e-47 |
| Msa0170070 | Msa1428000 | 0.851399 | 9.105849e-61 | -8.615850e-47 |
| Msa0177830 | Msa1428000 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa0177970 | Msa1428000 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0184700 | Msa1428000 | 0.815599 | 8.511332e-52 | -8.615850e-47 |
| Msa0203080 | Msa1428000 | 0.822598 | 2.174479e-53 | -8.615850e-47 |
| Msa0204970 | Msa1428000 | 0.807625 | 4.612950e-50 | -8.615850e-47 |
| Msa1226370 | Msa1428000 | 0.809421 | 1.908119e-50 | -8.615850e-47 |
| Msa1240940 | Msa1428000 | 0.809689 | 1.671389e-50 | -8.615850e-47 |
| Msa1252790 | Msa1428000 | 0.838680 | 2.490473e-57 | -8.615850e-47 |
| Msa1254420 | Msa1428000 | 0.827449 | 1.555296e-54 | -8.615850e-47 |
| Msa1254540 | Msa1428000 | 0.830742 | 2.473625e-55 | -8.615850e-47 |
| Msa1262850 | Msa1428000 | 0.809762 | 1.611869e-50 | -8.615850e-47 |
| Msa1263740 | Msa1428000 | 0.835497 | 1.621274e-56 | -8.615850e-47 |
| Msa1263780 | Msa1428000 | 0.825812 | 3.821903e-54 | -8.615850e-47 |
| Msa1263900 | Msa1428000 | 0.801692 | 7.987874e-49 | -8.615850e-47 |
| Msa1267930 | Msa1428000 | 0.828394 | 9.210517e-55 | -8.615850e-47 |
| Msa1268540 | Msa1428000 | 0.813729 | 2.209001e-51 | -8.615850e-47 |
| Msa1279120 | Msa1428000 | 0.830470 | 2.885022e-55 | -8.615850e-47 |
| Msa1282300 | Msa1428000 | 0.825614 | 4.257446e-54 | -8.615850e-47 |
| Msa1294280 | Msa1428000 | 0.833282 | 5.833869e-56 | -8.615850e-47 |
| Msa1294460 | Msa1428000 | 0.821927 | 3.111997e-53 | -8.615850e-47 |
| Msa1294790 | Msa1428000 | 0.844893 | 5.699856e-59 | -8.615850e-47 |
| Msa1297070 | Msa1428000 | 0.824882 | 6.344115e-54 | -8.615850e-47 |
| Msa1300460 | Msa1428000 | 0.813212 | 2.869468e-51 | -8.615850e-47 |
| Msa1301820 | Msa1428000 | 0.837626 | 4.651339e-57 | -8.615850e-47 |
| Msa1306570 | Msa1428000 | 0.826284 | 2.951866e-54 | -8.615850e-47 |
| Msa1321530 | Msa1428000 | 0.821422 | 4.071849e-53 | -8.615850e-47 |
| Msa1328870 | Msa1428000 | 0.816553 | 5.211678e-52 | -8.615850e-47 |
| Msa1332950 | Msa1428000 | 0.868328 | 7.085983e-66 | -8.615850e-47 |
| Msa1339170 | Msa1428000 | 0.818440 | 1.958569e-52 | -8.615850e-47 |
| Msa1342810 | Msa1428000 | 0.860098 | 2.617281e-63 | -8.615850e-47 |
| Msa0364680 | Msa1428000 | 0.810809 | 9.580903e-51 | -8.615850e-47 |
| Msa0373170 | Msa1428000 | 0.833157 | 6.265251e-56 | -8.615850e-47 |
| Msa0401060 | Msa1428000 | 0.806239 | 9.058907e-50 | -8.615850e-47 |
| Msa0413170 | Msa1428000 | 0.851730 | 7.335592e-61 | -8.615850e-47 |
| Msa0415450 | Msa1428000 | 0.819016 | 1.448994e-52 | -8.615850e-47 |
| Msa0415820 | Msa1428000 | 0.831018 | 2.116724e-55 | -8.615850e-47 |
| Msa0416160 | Msa1428000 | 0.823830 | 1.121183e-53 | -8.615850e-47 |
| Msa0420430 | Msa1428000 | 0.813686 | 2.257767e-51 | -8.615850e-47 |
| Msa0421130 | Msa1428000 | 0.830518 | 2.806664e-55 | -8.615850e-47 |
| Msa0421750 | Msa1428000 | 0.834230 | 3.380841e-56 | -8.615850e-47 |
| Msa0432690 | Msa1428000 | 0.803269 | 3.778521e-49 | -8.615850e-47 |
| Msa0433630 | Msa1428000 | 0.802947 | 4.405815e-49 | -8.615850e-47 |
| Msa0433760 | Msa1428000 | 0.817063 | 4.004185e-52 | -8.615850e-47 |
| Msa0456670 | Msa1428000 | 0.810820 | 9.528531e-51 | -8.615850e-47 |
| Msa0458100 | Msa1428000 | 0.806555 | 7.771852e-50 | -8.615850e-47 |
| Msa0460070 | Msa1428000 | 0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa0466520 | Msa1428000 | 0.854881 | 9.159004e-62 | -8.615850e-47 |
| Msa0466880 | Msa1428000 | 0.827069 | 1.917177e-54 | -8.615850e-47 |
| Msa0467690 | Msa1428000 | 0.840385 | 8.974815e-58 | -8.615850e-47 |
| Msa0468620 | Msa1428000 | 0.811065 | 8.433067e-51 | -8.615850e-47 |
| Msa0477630 | Msa1428000 | 0.811983 | 5.327580e-51 | -8.615850e-47 |
| Msa0478140 | Msa1428000 | 0.809408 | 1.920525e-50 | -8.615850e-47 |
| Msa0478200 | Msa1428000 | 0.800072 | 1.711203e-48 | -8.615850e-47 |
| Msa0989370 | Msa1428000 | 0.801620 | 8.264323e-49 | -8.615850e-47 |
| Msa1000780 | Msa1428000 | 0.804852 | 1.770838e-49 | -8.615850e-47 |
| Msa1008670 | Msa1428000 | 0.811237 | 7.740126e-51 | -8.615850e-47 |
| Msa1008850 | Msa1428000 | 0.833284 | 5.827443e-56 | -8.615850e-47 |
| Msa1019200 | Msa1428000 | 0.829492 | 4.993818e-55 | -8.615850e-47 |
| Msa1050260 | Msa1428000 | 0.843861 | 1.079743e-58 | -8.615850e-47 |
| Msa1060900 | Msa1428000 | 0.816797 | 4.594985e-52 | -8.615850e-47 |
| Msa1071410 | Msa1428000 | 0.818731 | 1.682176e-52 | -8.615850e-47 |
| Msa1076020 | Msa1428000 | 0.833392 | 5.474182e-56 | -8.615850e-47 |
| Msa1078860 | Msa1428000 | 0.813463 | 2.527209e-51 | -8.615850e-47 |
| Msa1078880 | Msa1428000 | 0.825702 | 4.059308e-54 | -8.615850e-47 |
| Msa1078970 | Msa1428000 | 0.817257 | 3.621699e-52 | -8.615850e-47 |
| Msa1078990 | Msa1428000 | 0.817689 | 2.894594e-52 | -8.615850e-47 |
| Msa1082380 | Msa1428000 | 0.848023 | 7.979161e-60 | -8.615850e-47 |
| Msa1104110 | Msa1428000 | 0.828486 | 8.753878e-55 | -8.615850e-47 |
| Msa1106220 | Msa1428000 | 0.827439 | 1.563523e-54 | -8.615850e-47 |
| Msa0241040 | Msa1428000 | 0.807637 | 4.586542e-50 | -8.615850e-47 |
| Msa0260630 | Msa1428000 | 0.800818 | 1.205598e-48 | -8.615850e-47 |
| Msa0281540 | Msa1428000 | 0.843216 | 1.606327e-58 | -8.615850e-47 |
| Msa0286620 | Msa1428000 | 0.803392 | 3.562531e-49 | -8.615850e-47 |
| Msa0320580 | Msa1428000 | 0.834680 | 2.605882e-56 | -8.615850e-47 |
| Msa0343010 | Msa1428000 | 0.807682 | 4.486493e-50 | -8.615850e-47 |
| Msa0344110 | Msa1428000 | 0.839087 | 1.954160e-57 | -8.615850e-47 |
| Msa1123200 | Msa1428000 | 0.825122 | 5.568147e-54 | -8.615850e-47 |
| Msa1127280 | Msa1428000 | 0.865261 | 6.714428e-65 | -8.615850e-47 |
| Msa1132530 | Msa1428000 | 0.812830 | 3.479659e-51 | -8.615850e-47 |
| Msa1138800 | Msa1428000 | 0.801456 | 8.927403e-49 | -8.615850e-47 |
| Msa1139050 | Msa1428000 | 0.811885 | 5.595734e-51 | -8.615850e-47 |
| Msa1147700 | Msa1428000 | 0.836335 | 9.940587e-57 | -8.615850e-47 |
| Msa1148630 | Msa1428000 | 0.816033 | 6.812718e-52 | -8.615850e-47 |
| Msa1154550 | Msa1428000 | 0.824145 | 9.460512e-54 | -8.615850e-47 |
| Msa1159590 | Msa1428000 | 0.823897 | 1.081286e-53 | -8.615850e-47 |
| Msa1163180 | Msa1428000 | 0.850149 | 2.045991e-60 | -8.615850e-47 |
| Msa1165480 | Msa1428000 | 0.866243 | 3.287716e-65 | -8.615850e-47 |
| Msa1169170 | Msa1428000 | 0.800026 | 1.748309e-48 | -8.615850e-47 |
| Msa1169190 | Msa1428000 | 0.827241 | 1.743821e-54 | -8.615850e-47 |
| Msa1169690 | Msa1428000 | 0.810045 | 1.400953e-50 | -8.615850e-47 |
| Msa1183910 | Msa1428000 | 0.809186 | 2.142994e-50 | -8.615850e-47 |
| Msa1188340 | Msa1428000 | 0.806536 | 7.841771e-50 | -8.615850e-47 |
| Msa1190390 | Msa1428000 | 0.842629 | 2.300686e-58 | -8.615850e-47 |
| Msa1191000 | Msa1428000 | 0.823046 | 1.709870e-53 | -8.615850e-47 |
| Msa1201170 | Msa1428000 | 0.821929 | 3.108939e-53 | -8.615850e-47 |
| Msa1201780 | Msa1428000 | 0.825066 | 5.741041e-54 | -8.615850e-47 |
| Msa1206040 | Msa1428000 | 0.817027 | 4.078998e-52 | -8.615850e-47 |
| Msa1211920 | Msa1428000 | 0.825709 | 4.043167e-54 | -8.615850e-47 |
| Msa1213830 | Msa1428000 | 0.829236 | 5.761696e-55 | -8.615850e-47 |
| Msa1214350 | Msa1428000 | 0.806029 | 1.003178e-49 | -8.615850e-47 |
| Msa1215980 | Msa1428000 | 0.867386 | 1.421904e-65 | -8.615850e-47 |
| Msa1215990 | Msa1428000 | 0.802054 | 6.729462e-49 | -8.615850e-47 |
| Msa1216590 | Msa1428000 | 0.809313 | 2.013111e-50 | -8.615850e-47 |
| Msa1218820 | Msa1428000 | 0.831027 | 2.106138e-55 | -8.615850e-47 |
| Msa1223390 | Msa1428000 | 0.801989 | 6.941021e-49 | -8.615850e-47 |
| Msa0485980 | Msa1428000 | 0.829796 | 4.213440e-55 | -8.615850e-47 |
| Msa0504720 | Msa1428000 | 0.814258 | 1.688117e-51 | -8.615850e-47 |
| Msa0506880 | Msa1428000 | 0.835844 | 1.324176e-56 | -8.615850e-47 |
| Msa0507810 | Msa1428000 | 0.806012 | 1.011167e-49 | -8.615850e-47 |
| Msa0507820 | Msa1428000 | 0.812063 | 5.119434e-51 | -8.615850e-47 |
| Msa0507920 | Msa1428000 | 0.815753 | 7.864149e-52 | -8.615850e-47 |
| Msa0513620 | Msa1428000 | 0.824790 | 6.668552e-54 | -8.615850e-47 |
| Msa0513640 | Msa1428000 | 0.818731 | 1.682356e-52 | -8.615850e-47 |
| Msa0514020 | Msa1428000 | 0.834749 | 2.503621e-56 | -8.615850e-47 |
| Msa0514500 | Msa1428000 | 0.809536 | 1.802490e-50 | -8.615850e-47 |
| Msa0520870 | Msa1428000 | 0.800316 | 1.525884e-48 | -8.615850e-47 |
| Msa0521320 | Msa1428000 | 0.805385 | 1.369511e-49 | -8.615850e-47 |
| Msa0521680 | Msa1428000 | 0.833192 | 6.140415e-56 | -8.615850e-47 |
| Msa0527850 | Msa1428000 | 0.862786 | 3.959127e-64 | -8.615850e-47 |
| Msa0541740 | Msa1428000 | 0.828797 | 7.363493e-55 | -8.615850e-47 |
| Msa0544410 | Msa1428000 | 0.826189 | 3.108722e-54 | -8.615850e-47 |
| Msa0545920 | Msa1428000 | 0.807498 | 4.907878e-50 | -8.615850e-47 |
| Msa0550590 | Msa1428000 | 0.829626 | 4.634158e-55 | -8.615850e-47 |
| Msa0554300 | Msa1428000 | 0.822128 | 2.795954e-53 | -8.615850e-47 |
| Msa0561560 | Msa1428000 | 0.855982 | 4.375288e-62 | -8.615850e-47 |
| Msa0563900 | Msa1428000 | 0.802829 | 4.660090e-49 | -8.615850e-47 |
| Msa0564980 | Msa1428000 | 0.829755 | 4.310015e-55 | -8.615850e-47 |
| Msa0572830 | Msa1428000 | 0.849287 | 3.562028e-60 | -8.615850e-47 |
| Msa0574660 | Msa1428000 | 0.809095 | 2.241166e-50 | -8.615850e-47 |
| Msa0582460 | Msa1428000 | 0.857809 | 1.267541e-62 | -8.615850e-47 |
| Msa0586200 | Msa1428000 | 0.864062 | 1.593249e-64 | -8.615850e-47 |
| Msa0590200 | Msa1428000 | 0.817630 | 2.984931e-52 | -8.615850e-47 |
| Msa0601720 | Msa1428000 | 0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0851300 | Msa1428000 | 0.800310 | 1.530076e-48 | -8.615850e-47 |
| Msa0861440 | Msa1428000 | 0.808660 | 2.776969e-50 | -8.615850e-47 |
| Msa0866530 | Msa1428000 | 0.819134 | 1.362025e-52 | -8.615850e-47 |
| Msa0879920 | Msa1428000 | 0.839200 | 1.827122e-57 | -8.615850e-47 |
| Msa0897790 | Msa1428000 | 0.817800 | 2.733236e-52 | -8.615850e-47 |
| Msa0900090 | Msa1428000 | 0.839872 | 1.221490e-57 | -8.615850e-47 |
| Msa0924430 | Msa1428000 | 0.811323 | 7.416196e-51 | -8.615850e-47 |
| Msa0926310 | Msa1428000 | 0.805497 | 1.297374e-49 | -8.615850e-47 |
| Msa0963370 | Msa1428000 | 0.815433 | 9.270371e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428000 | MtrunA17_Chr1g0203181 | 100.000 | 449 | 0 | 0 | 1 | 449 | 1 | 449 | 0.0 | 946 |
| Msa1428000 | MtrunA17_Chr7g0255791 | 96.413 | 446 | 15 | 1 | 1 | 446 | 1 | 445 | 0.0 | 905 |
| Msa1428000 | MtrunA17_Chr4g0008361 | 97.674 | 430 | 10 | 0 | 1 | 430 | 1 | 430 | 0.0 | 863 |
| Msa1428000 | MtrunA17_Chr4g0008401 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 857 |
| Msa1428000 | MtrunA17_Chr2g0292921 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 850 |
| Msa1428000 | MtrunA17_Chr4g0051631 | 95.116 | 430 | 21 | 0 | 1 | 430 | 1 | 430 | 0.0 | 843 |
| Msa1428000 | MtrunA17_Chr4g0007371 | 95.370 | 432 | 18 | 1 | 1 | 430 | 1 | 432 | 0.0 | 842 |
| Msa1428000 | MtrunA17_Chr3g0142731 | 93.287 | 432 | 27 | 1 | 1 | 430 | 1 | 432 | 0.0 | 830 |
| Msa1428000 | MtrunA17_Chr8g0393021 | 91.422 | 443 | 37 | 1 | 1 | 442 | 1 | 443 | 0.0 | 827 |
| Msa1428000 | MtrunA17_Chr8g0386781 | 91.628 | 430 | 36 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| Msa1428000 | MtrunA17_Chr8g0378821 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 4.65e-124 | 368 |
| Msa1428000 | MtrunA17_Chr3g0140821 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 1.34e-123 | 367 |
| Msa1428000 | MtrunA17_Chr4g0054511 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 4.83e-123 | 365 |
| Msa1428000 | MtrunA17_Chr1g0206881 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 6.12e-122 | 362 |
| Msa1428000 | MtrunA17_Chr6g0461281 | 40.402 | 448 | 256 | 2 | 1 | 437 | 1 | 448 | 8.21e-122 | 362 |
| Msa1428000 | MtrunA17_Chr7g0253411 | 40.553 | 434 | 248 | 2 | 1 | 424 | 1 | 434 | 9.03e-122 | 362 |
| Msa1428000 | MtrunA17_Chr2g0300671 | 37.045 | 440 | 264 | 4 | 1 | 431 | 1 | 436 | 6.16e-99 | 303 |
| Msa1428000 | MtrunA17_Chr2g0300491 | 36.667 | 450 | 274 | 3 | 1 | 442 | 1 | 447 | 8.56e-98 | 301 |
| Msa1428000 | MtrunA17_Chr7g0275431 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 7.62e-97 | 299 |
| Msa1428000 | MtrunA17_Chr3g0109241 | 31.852 | 135 | 84 | 1 | 269 | 395 | 4 | 138 | 3.04e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428000 | AT5G23860.2 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| Msa1428000 | AT5G23860.1 | 98.218 | 449 | 7 | 1 | 1 | 448 | 1 | 449 | 0.0 | 927 |
| Msa1428000 | AT5G62690.1 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| Msa1428000 | AT5G62700.1 | 97.105 | 449 | 11 | 2 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| Msa1428000 | AT2G29550.1 | 96.752 | 431 | 14 | 0 | 1 | 431 | 1 | 431 | 0.0 | 855 |
| Msa1428000 | AT5G12250.1 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 854 |
| Msa1428000 | AT1G75780.1 | 94.200 | 431 | 24 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| Msa1428000 | AT1G20010.1 | 93.735 | 431 | 26 | 1 | 1 | 430 | 1 | 431 | 0.0 | 835 |
| Msa1428000 | AT4G20890.1 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 829 |
| Msa1428000 | AT5G44340.1 | 92.558 | 430 | 32 | 0 | 1 | 430 | 1 | 430 | 0.0 | 823 |
| Msa1428000 | AT5G19780.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.93e-124 | 368 |
| Msa1428000 | AT5G19770.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 3.93e-124 | 368 |
| Msa1428000 | AT1G64740.1 | 41.014 | 434 | 246 | 2 | 1 | 424 | 1 | 434 | 1.34e-123 | 367 |
| Msa1428000 | AT4G14960.2 | 41.705 | 434 | 243 | 2 | 1 | 424 | 1 | 434 | 2.20e-122 | 364 |
| Msa1428000 | AT1G50010.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.50e-121 | 362 |
| Msa1428000 | AT1G04820.1 | 41.475 | 434 | 244 | 2 | 1 | 424 | 1 | 434 | 1.50e-121 | 362 |
| Msa1428000 | AT4G14960.1 | 41.710 | 386 | 215 | 2 | 1 | 376 | 1 | 386 | 9.44e-103 | 313 |
| Msa1428000 | AT3G61650.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.17e-97 | 300 |
| Msa1428000 | AT5G05620.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 5.34e-97 | 300 |
Find 150 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATATTATTCATGTTAA+TGG | 0.124820 | tig0026289:+4644 | Msa1428000:three_prime_UTR |
| AGCTTGGAGTAGTGAGTTTA+AGG | 0.176825 | tig0026289:-3606 | None:intergenic |
| CCCTCGTTTGCATTTCTTCA+TGG | 0.183235 | tig0026289:+3873 | Msa1428000:CDS |
| GCACACAACTTCCCAGAATT+TGG | 0.196817 | tig0026289:-1934 | None:intergenic |
| TTGTTTGCTATTGTAGTTTC+AGG | 0.209930 | tig0026289:+4573 | Msa1428000:three_prime_UTR |
| ACCAAATCGGAGCCAAATTC+TGG | 0.224594 | tig0026289:+1922 | Msa1428000:CDS |
| GCTTTCTTGCATTGGTATAC+TGG | 0.248415 | tig0026289:+4270 | Msa1428000:CDS |
| ACCTTTCGCCCAGTTGTTTC+CGG | 0.265804 | tig0026289:-2171 | None:intergenic |
| CGGCCTGATAACTTCGTCTT+TGG | 0.273503 | tig0026289:+2137 | Msa1428000:CDS |
| CTTGGTGGTGGTACTGGTTC+TGG | 0.275474 | tig0026289:+3379 | Msa1428000:CDS |
| TGGTAACTCCACATCTATTC+AGG | 0.284386 | tig0026289:+4197 | Msa1428000:CDS |
| CATGAATAATATGGAAATAT+AGG | 0.286290 | tig0026289:-4637 | None:intergenic |
| AACCATTAACATGAATAATA+TGG | 0.293233 | tig0026289:-4646 | None:intergenic |
| GAACTCAGATCTTCGCAAAT+TGG | 0.295990 | tig0026289:+3831 | Msa1428000:CDS |
| CCCGCCAACCGGTCTTAAAA+TGG | 0.301301 | tig0026289:+4161 | Msa1428000:CDS |
| AGATGAGGAGGAAGAAGTTC+AGG | 0.309205 | tig0026289:+4407 | Msa1428000:CDS |
| CACTCCCTTGGTGGTGGTAC+TGG | 0.316198 | tig0026289:+3373 | Msa1428000:CDS |
| CATCTATTCAGGAGATGTTT+AGG | 0.317382 | tig0026289:+4208 | Msa1428000:CDS |
| CGCCCAGTTGTTTCCGGCAC+CGG | 0.324024 | tig0026289:-2165 | None:intergenic |
| CAGTAGCATCTTGGTATTGC+TGG | 0.336251 | tig0026289:-4359 | None:intergenic |
| GGATCTGGAGCCAGGGACTA+TGG | 0.340774 | tig0026289:+2079 | Msa1428000:CDS |
| GACAGTGGATTTCACATTGT+TGG | 0.341115 | tig0026289:-4130 | None:intergenic |
| TCTTCGAATCCCACATCTGC+TGG | 0.346684 | tig0026289:-3963 | None:intergenic |
| GTTCTCATGGATCTGGAGCC+AGG | 0.354959 | tig0026289:+2071 | Msa1428000:CDS |
| CCCAGAATTTGGCTCCGATT+TGG | 0.356984 | tig0026289:-1923 | None:intergenic |
| GGTGGTACTGGTTCTGGAAT+GGG | 0.369152 | tig0026289:+3385 | Msa1428000:CDS |
| TCATTGTGGCCGAAATTAGA+TGG | 0.369833 | tig0026289:-3771 | None:intergenic |
| AGTCCGGTGCCGGAAACAAC+TGG | 0.370377 | tig0026289:+2162 | Msa1428000:CDS |
| TGAGTTTGAAGAACGAGTTT+TGG | 0.379865 | tig0026289:-1851 | None:intergenic |
| GAGAATTGTGATTGTCTTCA+AGG | 0.384367 | tig0026289:+2254 | Msa1428000:CDS |
| AGATCTGAACCATCTAATTT+CGG | 0.387444 | tig0026289:+3762 | Msa1428000:CDS |
| TCATTTCTCATAGAATTCTC+TGG | 0.389916 | tig0026289:+1760 | Msa1428000:five_prime_UTR |
| TGTCCAAAGACGAAGTTATC+AGG | 0.391751 | tig0026289:-2140 | None:intergenic |
| TGCTGATGAATGCATGGTTC+TGG | 0.393880 | tig0026289:+3549 | Msa1428000:CDS |
| ACAGTGGATTTCACATTGTT+GGG | 0.397830 | tig0026289:-4129 | None:intergenic |
| TCTTAATCTTACAACTGAAC+TGG | 0.407608 | tig0026289:+4718 | Msa1428000:three_prime_UTR |
| GGTTCCCGCATTGTCCTCCT+TGG | 0.410215 | tig0026289:-1902 | None:intergenic |
| TAGAGCTGTTCTCATGGATC+TGG | 0.416476 | tig0026289:+2064 | Msa1428000:CDS |
| CAGGTTTGCCACTCCCTTGG+TGG | 0.418895 | tig0026289:+3364 | Msa1428000:CDS |
| CGTTTGCATTTCTTCATGGT+GGG | 0.424005 | tig0026289:+3877 | Msa1428000:CDS |
| TTTCAGGTTTGCCACTCCCT+TGG | 0.428262 | tig0026289:+3361 | Msa1428000:CDS |
| GTTGTTCCCTTGGTACCTTC+CGG | 0.430541 | tig0026289:-1979 | None:intergenic |
| GTTGAAGATCGTTGTTCCCT+TGG | 0.430648 | tig0026289:-1989 | None:intergenic |
| TGGTGGTACTGGTTCTGGAA+TGG | 0.433580 | tig0026289:+3384 | Msa1428000:CDS |
| ATATTATTCATGTTAATGGT+TGG | 0.434131 | tig0026289:+4648 | Msa1428000:three_prime_UTR |
| AAAGTAAGCATCATTCGATC+AGG | 0.435587 | tig0026289:-3442 | None:intergenic |
| GTAGAAAAGCTTTCTTGCAT+TGG | 0.442451 | tig0026289:+4262 | Msa1428000:CDS |
| GTCTGTGATATCCCGCCAAC+CGG | 0.443322 | tig0026289:+4150 | Msa1428000:CDS |
| CTCGTGGTTCACAGCAGTAC+AGG | 0.444979 | tig0026289:+3917 | Msa1428000:CDS |
| GCTTGGAGTAGTGAGTTTAA+GGG | 0.448732 | tig0026289:-3605 | None:intergenic |
| ATTCGGTGCTTGATGTTGTT+AGG | 0.449556 | tig0026289:+2222 | Msa1428000:CDS |
| ACTTTATAGCGGGATGTAAC+GGG | 0.452762 | tig0026289:-1708 | None:intergenic |
| GACTTTATAGCGGGATGTAA+CGG | 0.454349 | tig0026289:-1709 | None:intergenic |
| GTCTTTGGACAGTCCGGTGC+CGG | 0.454398 | tig0026289:+2152 | Msa1428000:CDS |
| ACATGTTGTCTTCGATTCCC+TGG | 0.455659 | tig0026289:+3802 | Msa1428000:CDS |
| AACTTCGTCTTTGGACAGTC+CGG | 0.467613 | tig0026289:+2146 | Msa1428000:CDS |
| CACATCTGCTGGGTCAGCTC+AGG | 0.473481 | tig0026289:-3952 | None:intergenic |
| CTCCGTGTTCCCATCTCCTA+AGG | 0.475795 | tig0026289:+3465 | Msa1428000:CDS |
| CTTCATCTGCAGTAGCATCT+TGG | 0.477927 | tig0026289:-4368 | None:intergenic |
| CGTTCCTAGAGCTGTTCTCA+TGG | 0.485327 | tig0026289:+2058 | Msa1428000:CDS |
| CCAAATCGGAGCCAAATTCT+GGG | 0.486989 | tig0026289:+1923 | Msa1428000:CDS |
| CATCTGCTCATCAACCTCCT+TGG | 0.489308 | tig0026289:-4061 | None:intergenic |
| TGGAGAGGGTATGGATGAGA+TGG | 0.489491 | tig0026289:+4290 | Msa1428000:CDS |
| TTGGTATACTGGAGAGGGTA+TGG | 0.494465 | tig0026289:+4281 | Msa1428000:CDS |
| TCTCTCTCTCGAACTCGTTA+CGG | 0.497184 | tig0026289:+1808 | Msa1428000:five_prime_UTR |
| ACTATGGACAGCGTCAGATC+TGG | 0.497511 | tig0026289:+2095 | Msa1428000:CDS |
| GTTTGCCACTCCCTTGGTGG+TGG | 0.498542 | tig0026289:+3367 | Msa1428000:CDS |
| TTCTCATGGATCTGGAGCCA+GGG | 0.504140 | tig0026289:+2072 | Msa1428000:CDS |
| GTGTCAGATACCTTAGGAGA+TGG | 0.506140 | tig0026289:-3475 | None:intergenic |
| GAAGTTGTGTGCGCTGAGCA+CGG | 0.506720 | tig0026289:+1945 | Msa1428000:CDS |
| GGACAATGCGGGAACCAAAT+CGG | 0.507915 | tig0026289:+1909 | Msa1428000:CDS |
| CTGAGCTGACCCAGCAGATG+TGG | 0.508297 | tig0026289:+3953 | Msa1428000:CDS |
| ACAGAGAGTGTAGCGTTGTA+AGG | 0.511785 | tig0026289:-3508 | None:intergenic |
| ACAGTAGTATTGTGATGTGA+AGG | 0.515826 | tig0026289:+4444 | Msa1428000:three_prime_UTR |
| AGGAGCTGAGTTGATTGATT+CGG | 0.521449 | tig0026289:+2205 | Msa1428000:CDS |
| ATTCATCATACTTTGTTGAG+TGG | 0.522858 | tig0026289:+4103 | Msa1428000:CDS |
| GTCAAATAACGACCGTGGCG+AGG | 0.525061 | tig0026289:-4006 | None:intergenic |
| TGAGGAGGAAGAAGTTCAGG+AGG | 0.525475 | tig0026289:+4410 | Msa1428000:CDS |
| TTGCATTGGTATACTGGAGA+GGG | 0.526307 | tig0026289:+4276 | Msa1428000:CDS |
| GGGGTATGACTATGAAGATG+AGG | 0.526329 | tig0026289:+4392 | Msa1428000:CDS |
| GGCCGGAAAATCTGACCGTA+TGG | 0.526703 | tig0026289:-2119 | None:intergenic |
| CATCAGCATTCTCAACAAGT+TGG | 0.528768 | tig0026289:-3534 | None:intergenic |
| AGATCTGAGTTCAATTGACC+AGG | 0.531971 | tig0026289:-3820 | None:intergenic |
| CTTCGAATCCCACATCTGCT+GGG | 0.532809 | tig0026289:-3962 | None:intergenic |
| ACAACAGTGTCAGATACCTT+AGG | 0.533881 | tig0026289:-3481 | None:intergenic |
| TCGTTTGCATTTCTTCATGG+TGG | 0.534932 | tig0026289:+3876 | Msa1428000:CDS |
| AAGAAATGCAAACGAGGGAA+AGG | 0.537226 | tig0026289:-3868 | None:intergenic |
| GAAGAAAGTGACTTTATAGC+GGG | 0.540763 | tig0026289:-1718 | None:intergenic |
| GGTGCTTGATGTTGTTAGGA+AGG | 0.544190 | tig0026289:+2226 | Msa1428000:CDS |
| AAGTTGTGTGCGCTGAGCAC+GGG | 0.549539 | tig0026289:+1946 | Msa1428000:CDS |
| TACTACAACGAAGCGAGTTG+TGG | 0.552610 | tig0026289:+2029 | Msa1428000:CDS |
| GAGGGTGAGTGAGCAATTCA+CGG | 0.553083 | tig0026289:+4230 | Msa1428000:CDS |
| GCCGGAAACAACTGGGCGAA+AGG | 0.556278 | tig0026289:+2170 | Msa1428000:CDS |
| AGCGTCAGATCTGGTCCATA+CGG | 0.561086 | tig0026289:+2104 | Msa1428000:CDS |
| GAGTAGTGAGTTTAAGGGTG+CGG | 0.561131 | tig0026289:-3600 | None:intergenic |
| AGATGCTACTGCAGATGAAG+AGG | 0.562679 | tig0026289:+4371 | Msa1428000:CDS |
| ACATCCAAGGAGGACAATGC+GGG | 0.563147 | tig0026289:+1898 | Msa1428000:CDS |
| CTTGCATTGGTATACTGGAG+AGG | 0.565550 | tig0026289:+4275 | Msa1428000:CDS |
| CTAATTTCGGCCACAATGAG+TGG | 0.567054 | tig0026289:+3775 | Msa1428000:CDS |
| AGATCCATGAGAACAGCTCT+AGG | 0.569536 | tig0026289:-2062 | None:intergenic |
| CTATTCAGGAGATGTTTAGG+AGG | 0.571191 | tig0026289:+4211 | Msa1428000:CDS |
| CTGACGCTGTCCATAGTCCC+TGG | 0.571304 | tig0026289:-2089 | None:intergenic |
| GTATGACTATGAAGATGAGG+AGG | 0.571612 | tig0026289:+4395 | Msa1428000:CDS |
| CAGCATTCTCAACAAGTTGG+TGG | 0.573199 | tig0026289:-3531 | None:intergenic |
| TTTGCCCCACTCACTTCTCG+TGG | 0.577800 | tig0026289:+3901 | Msa1428000:CDS |
| TCGTGGTTCACAGCAGTACA+GGG | 0.585028 | tig0026289:+3918 | Msa1428000:CDS |
| GAGCACGGGATCGACTCCAC+CGG | 0.585627 | tig0026289:+1960 | Msa1428000:CDS |
| CAGTAGTATTGTGATGTGAA+GGG | 0.586251 | tig0026289:+4445 | Msa1428000:three_prime_UTR |
| GCTCATCTTACCACGGAACA+TGG | 0.591088 | tig0026289:-4037 | None:intergenic |
| CGTGAGATTCTTCACATCCA+AGG | 0.593333 | tig0026289:+1885 | Msa1428000:CDS |
| GATGCTACTGCAGATGAAGA+GGG | 0.594540 | tig0026289:+4372 | Msa1428000:CDS |
| CAGTACCACCACCAAGGGAG+TGG | 0.594965 | tig0026289:-3372 | None:intergenic |
| GACTCCACCGGAAGGTACCA+AGG | 0.596275 | tig0026289:+1972 | Msa1428000:CDS |
| GTCCGGTGCCGGAAACAACT+GGG | 0.596726 | tig0026289:+2163 | Msa1428000:CDS |
| TGCGCTGCTGATCCTCGCCA+CGG | 0.597098 | tig0026289:+3994 | Msa1428000:CDS |
| TACCTTAGGAGATGGGAACA+CGG | 0.597343 | tig0026289:-3467 | None:intergenic |
| AAACATCTCCTGAATAGATG+TGG | 0.598080 | tig0026289:-4205 | None:intergenic |
| ACAGCATCTGCCATGTTCCG+TGG | 0.598969 | tig0026289:+4027 | Msa1428000:CDS |
| TGTCAGATACCTTAGGAGAT+GGG | 0.602090 | tig0026289:-3474 | None:intergenic |
| CAAAGACGAAGTTATCAGGC+CGG | 0.603665 | tig0026289:-2136 | None:intergenic |
| ACATGTAACACCACTCATTG+TGG | 0.605465 | tig0026289:-3785 | None:intergenic |
| GTTCCCTTGGTACCTTCCGG+TGG | 0.611432 | tig0026289:-1976 | None:intergenic |
| AGAACCAGTACCACCACCAA+GGG | 0.618252 | tig0026289:-3377 | None:intergenic |
| TATTCAGGAGATGTTTAGGA+GGG | 0.623258 | tig0026289:+4212 | Msa1428000:CDS |
| CACATCCAAGGAGGACAATG+CGG | 0.623605 | tig0026289:+1897 | Msa1428000:CDS |
| TGAGCTGACCCAGCAGATGT+GGG | 0.624406 | tig0026289:+3954 | Msa1428000:CDS |
| AAGTAAGCATCATTCGATCA+GGG | 0.636592 | tig0026289:-3441 | None:intergenic |
| ACCATGAAGAAATGCAAACG+AGG | 0.637063 | tig0026289:-3874 | None:intergenic |
| TGAGAATGCTGATGAATGCA+TGG | 0.647401 | tig0026289:+3543 | Msa1428000:CDS |
| AGAAGAAAGTGACTTTATAG+CGG | 0.648023 | tig0026289:-1719 | None:intergenic |
| GCTTGATGTTGTTAGGAAGG+AGG | 0.649257 | tig0026289:+2229 | Msa1428000:CDS |
| GCGAAAGGTCACTACACTGA+AGG | 0.656934 | tig0026289:+2185 | Msa1428000:CDS |
| GTGAACCACGAGAAGTGAGT+GGG | 0.660953 | tig0026289:-3906 | None:intergenic |
| TGGCGGGATATCACAGACAG+TGG | 0.662431 | tig0026289:-4145 | None:intergenic |
| CCATGAAGAAATGCAAACGA+GGG | 0.665875 | tig0026289:-3873 | None:intergenic |
| ACGGGATCGACTCCACCGGA+AGG | 0.666784 | tig0026289:+1964 | Msa1428000:CDS |
| TTTGATTTCTAAAATCAGGG+AGG | 0.671547 | tig0026289:+3414 | Msa1428000:CDS |
| CAGAACCAGTACCACCACCA+AGG | 0.675091 | tig0026289:-3378 | None:intergenic |
| ATGCTACTGCAGATGAAGAG+GGG | 0.676889 | tig0026289:+4373 | Msa1428000:CDS |
| TGTGAACCACGAGAAGTGAG+TGG | 0.677800 | tig0026289:-3907 | None:intergenic |
| ACTCCACCGGAAGGTACCAA+GGG | 0.680036 | tig0026289:+1973 | Msa1428000:CDS |
| GATCTGAGTTCAATTGACCA+GGG | 0.680125 | tig0026289:-3819 | None:intergenic |
| CCTTGGTGCTCATCTTACCA+CGG | 0.683046 | tig0026289:-4044 | None:intergenic |
| GGGATGTAACGGGTATGTGA+CGG | 0.688890 | tig0026289:-1698 | None:intergenic |
| TGAACCACGAGAAGTGAGTG+GGG | 0.716024 | tig0026289:-3905 | None:intergenic |
| ATGCTGTCAAATAACGACCG+TGG | 0.720715 | tig0026289:-4011 | None:intergenic |
| CCGTGGTAAGATGAGCACCA+AGG | 0.721405 | tig0026289:+4044 | Msa1428000:CDS |
| ATTGCTGGTACTCTGAGACA+AGG | 0.726640 | tig0026289:-4344 | None:intergenic |
| TGGTAAGATGAGCACCAAGG+AGG | 0.729589 | tig0026289:+4047 | Msa1428000:CDS |
| GAGATTCTTCACATCCAAGG+AGG | 0.735981 | tig0026289:+1888 | Msa1428000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTTATACAAGTTTTTA+AGG | - | tig0026289:2961-2980 | None:intergenic | 15.0% |
| !! | AAAAACTTGTATAACTAATT+AGG | + | tig0026289:2962-2981 | Msa1428000:intron | 15.0% |
| !!! | TTGATAATCAGATTTGATAT+GGG | + | tig0026289:3000-3019 | Msa1428000:intron | 20.0% |
| !! | AAGTAAACAAAACAAAACAA+AGG | - | tig0026289:3300-3319 | None:intergenic | 20.0% |
| !!! | TTGTTTTGTTTACTTGAATT+TGG | + | tig0026289:3305-3324 | Msa1428000:intron | 20.0% |
| !!! | TGTTTTGTTTACTTGAATTT+GGG | + | tig0026289:3306-3325 | Msa1428000:intron | 20.0% |
| !!! | ACTTTTGATTTCTAAAATCA+GGG | + | tig0026289:3411-3430 | Msa1428000:CDS | 20.0% |
| !! | ATTATTAGCAAAAACTTAAC+AGG | - | tig0026289:3660-3679 | None:intergenic | 20.0% |
| !! | ATTTGACAACAAATGAAAAA+AGG | - | tig0026289:4613-4632 | None:intergenic | 20.0% |
| !! | CATGAATAATATGGAAATAT+AGG | - | tig0026289:4640-4659 | None:intergenic | 20.0% |
| !! | TTCCATATTATTCATGTTAA+TGG | + | tig0026289:4644-4663 | Msa1428000:three_prime_UTR | 20.0% |
| !! | AACCATTAACATGAATAATA+TGG | - | tig0026289:4649-4668 | None:intergenic | 20.0% |
| !! | ATATTATTCATGTTAATGGT+TGG | + | tig0026289:4648-4667 | Msa1428000:three_prime_UTR | 20.0% |
| ! | AAACAATTAGAAGCAGAAAT+CGG | - | tig0026289:2291-2310 | None:intergenic | 25.0% |
| !!! | GTTGATAATCAGATTTGATA+TGG | + | tig0026289:2999-3018 | Msa1428000:intron | 25.0% |
| !! | ATTTGAAGTGCTATAGTAAT+AGG | + | tig0026289:3052-3071 | Msa1428000:intron | 25.0% |
| ! | TCTATGTGTTGTGATAAATT+AGG | + | tig0026289:3174-3193 | Msa1428000:intron | 25.0% |
| ! | TTAGAAGTTGTGATATAACT+TGG | + | tig0026289:3241-3260 | Msa1428000:intron | 25.0% |
| !!! | CACTTTTGATTTCTAAAATC+AGG | + | tig0026289:3410-3429 | Msa1428000:CDS | 25.0% |
| !!! | AAAATGGCTTCTACTTTTAT+TGG | + | tig0026289:4177-4196 | Msa1428000:CDS | 25.0% |
| AGAAGAAAGTGACTTTATAG+CGG | - | tig0026289:1722-1741 | None:intergenic | 30.0% | |
| TCATTTCTCATAGAATTCTC+TGG | + | tig0026289:1760-1779 | Msa1428000:five_prime_UTR | 30.0% | |
| ACACAAAAATTCCTAGATCA+AGG | - | tig0026289:2501-2520 | None:intergenic | 30.0% | |
| ACAAGTTATTCAAAACACAG+TGG | - | tig0026289:3120-3139 | None:intergenic | 30.0% | |
| ! | TTAGTATGTAAGAGCATGTT+TGG | + | tig0026289:3149-3168 | Msa1428000:intron | 30.0% |
| ! | TGAATTTGGGATTTCTAACA+TGG | + | tig0026289:3319-3338 | Msa1428000:intron | 30.0% |
| !! | TTTGATTTCTAAAATCAGGG+AGG | + | tig0026289:3414-3433 | Msa1428000:CDS | 30.0% |
| AACTTAACAGGCAAAAACAT+AGG | - | tig0026289:3648-3667 | None:intergenic | 30.0% | |
| AGATCTGAACCATCTAATTT+CGG | + | tig0026289:3762-3781 | Msa1428000:CDS | 30.0% | |
| ATTCATCATACTTTGTTGAG+TGG | + | tig0026289:4103-4122 | Msa1428000:CDS | 30.0% | |
| ! | AATGCAAGAAAGCTTTTCTA+CGG | - | tig0026289:4263-4282 | None:intergenic | 30.0% |
| !! | TTGTTTGCTATTGTAGTTTC+AGG | + | tig0026289:4573-4592 | Msa1428000:three_prime_UTR | 30.0% |
| TCTTAATCTTACAACTGAAC+TGG | + | tig0026289:4718-4737 | Msa1428000:three_prime_UTR | 30.0% | |
| GAAGAAAGTGACTTTATAGC+GGG | - | tig0026289:1721-1740 | None:intergenic | 35.0% | |
| ! | TGAGTTTGAAGAACGAGTTT+TGG | - | tig0026289:1854-1873 | None:intergenic | 35.0% |
| GAGAATTGTGATTGTCTTCA+AGG | + | tig0026289:2254-2273 | Msa1428000:CDS | 35.0% | |
| !!! | AGAGTTTTGAACCTTGATCT+AGG | + | tig0026289:2800-2819 | Msa1428000:intron | 35.0% |
| ACACAGAAATTCCTAGATCA+AGG | - | tig0026289:2814-2833 | None:intergenic | 35.0% | |
| AATCAGATTTGATATGGGAG+TGG | + | tig0026289:3005-3024 | Msa1428000:intron | 35.0% | |
| TGATATAACTTGGACGTGTA+TGG | + | tig0026289:3251-3270 | Msa1428000:intron | 35.0% | |
| ! | CATGGTTTTCAGAATCTTTC+AGG | + | tig0026289:3337-3356 | Msa1428000:intron | 35.0% |
| !!! | TCAGAATCTTTCAGGTTTTC+AGG | + | tig0026289:3345-3364 | Msa1428000:intron | 35.0% |
| AAGTAAGCATCATTCGATCA+GGG | - | tig0026289:3444-3463 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATTCGATC+AGG | - | tig0026289:3445-3464 | None:intergenic | 35.0% | |
| ATTATGATGAACTCACAGCT+TGG | - | tig0026289:3625-3644 | None:intergenic | 35.0% | |
| ! | AAATTGAGCCTTGTGTTGTT+TGG | + | tig0026289:3729-3748 | Msa1428000:intron | 35.0% |
| ! | ACAGTGGATTTCACATTGTT+GGG | - | tig0026289:4132-4151 | None:intergenic | 35.0% |
| !!! | AGTAGAAGCCATTTTAAGAC+CGG | - | tig0026289:4172-4191 | None:intergenic | 35.0% |
| AAACATCTCCTGAATAGATG+TGG | - | tig0026289:4208-4227 | None:intergenic | 35.0% | |
| CATCTATTCAGGAGATGTTT+AGG | + | tig0026289:4208-4227 | Msa1428000:CDS | 35.0% | |
| TATTCAGGAGATGTTTAGGA+GGG | + | tig0026289:4212-4231 | Msa1428000:CDS | 35.0% | |
| GTAGAAAAGCTTTCTTGCAT+TGG | + | tig0026289:4262-4281 | Msa1428000:CDS | 35.0% | |
| ACAGTAGTATTGTGATGTGA+AGG | + | tig0026289:4444-4463 | Msa1428000:three_prime_UTR | 35.0% | |
| CAGTAGTATTGTGATGTGAA+GGG | + | tig0026289:4445-4464 | Msa1428000:three_prime_UTR | 35.0% | |
| !! | GAAAAAGGTATTCAGGTTTG+GGG | - | tig0026289:4537-4556 | None:intergenic | 35.0% |
| !! | CGAAAAAGGTATTCAGGTTT+GGG | - | tig0026289:4538-4557 | None:intergenic | 35.0% |
| ! | CCAAACCTGAATACCTTTTT+CGG | + | tig0026289:4536-4555 | Msa1428000:three_prime_UTR | 35.0% |
| ! | CAAACCTGAATACCTTTTTC+GGG | + | tig0026289:4537-4556 | Msa1428000:three_prime_UTR | 35.0% |
| !! | AAACCTGAATACCTTTTTCG+GGG | + | tig0026289:4538-4557 | Msa1428000:three_prime_UTR | 35.0% |
| ! | ACTTTATAGCGGGATGTAAC+GGG | - | tig0026289:1711-1730 | None:intergenic | 40.0% |
| ! | GACTTTATAGCGGGATGTAA+CGG | - | tig0026289:1712-1731 | None:intergenic | 40.0% |
| TGTCCAAAGACGAAGTTATC+AGG | - | tig0026289:2143-2162 | None:intergenic | 40.0% | |
| !! | AGGAGCTGAGTTGATTGATT+CGG | + | tig0026289:2205-2224 | Msa1428000:CDS | 40.0% |
| !! | ATTCGGTGCTTGATGTTGTT+AGG | + | tig0026289:2222-2241 | Msa1428000:CDS | 40.0% |
| TGTCAGATACCTTAGGAGAT+GGG | - | tig0026289:3477-3496 | None:intergenic | 40.0% | |
| ACAACAGTGTCAGATACCTT+AGG | - | tig0026289:3484-3503 | None:intergenic | 40.0% | |
| CATCAGCATTCTCAACAAGT+TGG | - | tig0026289:3537-3556 | None:intergenic | 40.0% | |
| TGAGAATGCTGATGAATGCA+TGG | + | tig0026289:3543-3562 | Msa1428000:CDS | 40.0% | |
| GCTTGGAGTAGTGAGTTTAA+GGG | - | tig0026289:3608-3627 | None:intergenic | 40.0% | |
| AGCTTGGAGTAGTGAGTTTA+AGG | - | tig0026289:3609-3628 | None:intergenic | 40.0% | |
| AACTGCAACCAAACAACACA+AGG | - | tig0026289:3740-3759 | None:intergenic | 40.0% | |
| !! | TTGTGTTGTTTGGTTGCAGT+TGG | + | tig0026289:3739-3758 | Msa1428000:intron | 40.0% |
| TCATTGTGGCCGAAATTAGA+TGG | - | tig0026289:3774-3793 | None:intergenic | 40.0% | |
| ACATGTAACACCACTCATTG+TGG | - | tig0026289:3788-3807 | None:intergenic | 40.0% | |
| GATCTGAGTTCAATTGACCA+GGG | - | tig0026289:3822-3841 | None:intergenic | 40.0% | |
| AGATCTGAGTTCAATTGACC+AGG | - | tig0026289:3823-3842 | None:intergenic | 40.0% | |
| GAACTCAGATCTTCGCAAAT+TGG | + | tig0026289:3831-3850 | Msa1428000:CDS | 40.0% | |
| AAGAAATGCAAACGAGGGAA+AGG | - | tig0026289:3871-3890 | None:intergenic | 40.0% | |
| CCATGAAGAAATGCAAACGA+GGG | - | tig0026289:3876-3895 | None:intergenic | 40.0% | |
| ACCATGAAGAAATGCAAACG+AGG | - | tig0026289:3877-3896 | None:intergenic | 40.0% | |
| TCGTTTGCATTTCTTCATGG+TGG | + | tig0026289:3876-3895 | Msa1428000:CDS | 40.0% | |
| CGTTTGCATTTCTTCATGGT+GGG | + | tig0026289:3877-3896 | Msa1428000:CDS | 40.0% | |
| ! | GACAGTGGATTTCACATTGT+TGG | - | tig0026289:4133-4152 | None:intergenic | 40.0% |
| TGGTAACTCCACATCTATTC+AGG | + | tig0026289:4197-4216 | Msa1428000:CDS | 40.0% | |
| CTATTCAGGAGATGTTTAGG+AGG | + | tig0026289:4211-4230 | Msa1428000:CDS | 40.0% | |
| ! | GAAAGCTTTTCTACGGAACA+TGG | - | tig0026289:4256-4275 | None:intergenic | 40.0% |
| ! | GCTTTCTTGCATTGGTATAC+TGG | + | tig0026289:4270-4289 | Msa1428000:CDS | 40.0% |
| ! | TTGCATTGGTATACTGGAGA+GGG | + | tig0026289:4276-4295 | Msa1428000:CDS | 40.0% |
| GTATGACTATGAAGATGAGG+AGG | + | tig0026289:4395-4414 | Msa1428000:CDS | 40.0% | |
| !! | CCGAAAAAGGTATTCAGGTT+TGG | - | tig0026289:4539-4558 | None:intergenic | 40.0% |
| !!! | AACCTGAATACCTTTTTCGG+GGG | + | tig0026289:4539-4558 | Msa1428000:three_prime_UTR | 40.0% |
| AGAGAGAGAGAGAGAGAAGA+AGG | - | tig0026289:1795-1814 | None:intergenic | 45.0% | |
| TCTCTCTCTCGAACTCGTTA+CGG | + | tig0026289:1808-1827 | Msa1428000:five_prime_UTR | 45.0% | |
| !!! | CGAGTTTTGGAGTGAGAAAG+TGG | - | tig0026289:1841-1860 | None:intergenic | 45.0% |
| CGTGAGATTCTTCACATCCA+AGG | + | tig0026289:1885-1904 | Msa1428000:CDS | 45.0% | |
| GAGATTCTTCACATCCAAGG+AGG | + | tig0026289:1888-1907 | Msa1428000:CDS | 45.0% | |
| ACCAAATCGGAGCCAAATTC+TGG | + | tig0026289:1922-1941 | Msa1428000:CDS | 45.0% | |
| CCAAATCGGAGCCAAATTCT+GGG | + | tig0026289:1923-1942 | Msa1428000:CDS | 45.0% | |
| GCACACAACTTCCCAGAATT+TGG | - | tig0026289:1937-1956 | None:intergenic | 45.0% | |
| GTTGAAGATCGTTGTTCCCT+TGG | - | tig0026289:1992-2011 | None:intergenic | 45.0% | |
| TACTACAACGAAGCGAGTTG+TGG | + | tig0026289:2029-2048 | Msa1428000:CDS | 45.0% | |
| AGATCCATGAGAACAGCTCT+AGG | - | tig0026289:2065-2084 | None:intergenic | 45.0% | |
| TAGAGCTGTTCTCATGGATC+TGG | + | tig0026289:2064-2083 | Msa1428000:CDS | 45.0% | |
| ! | GTCCATACGGTCAGATTTTC+CGG | + | tig0026289:2117-2136 | Msa1428000:CDS | 45.0% |
| CAAAGACGAAGTTATCAGGC+CGG | - | tig0026289:2139-2158 | None:intergenic | 45.0% | |
| AACTTCGTCTTTGGACAGTC+CGG | + | tig0026289:2146-2165 | Msa1428000:CDS | 45.0% | |
| GGTGCTTGATGTTGTTAGGA+AGG | + | tig0026289:2226-2245 | Msa1428000:CDS | 45.0% | |
| GCTTGATGTTGTTAGGAAGG+AGG | + | tig0026289:2229-2248 | Msa1428000:CDS | 45.0% | |
| AGAGAATCGAGCCTTGATCT+AGG | + | tig0026289:2487-2506 | Msa1428000:intron | 45.0% | |
| TACCTTAGGAGATGGGAACA+CGG | - | tig0026289:3470-3489 | None:intergenic | 45.0% | |
| GTGTCAGATACCTTAGGAGA+TGG | - | tig0026289:3478-3497 | None:intergenic | 45.0% | |
| ! | ACAGAGAGTGTAGCGTTGTA+AGG | - | tig0026289:3511-3530 | None:intergenic | 45.0% |
| ! | CAGCATTCTCAACAAGTTGG+TGG | - | tig0026289:3534-3553 | None:intergenic | 45.0% |
| TGCTGATGAATGCATGGTTC+TGG | + | tig0026289:3549-3568 | Msa1428000:CDS | 45.0% | |
| GAGTAGTGAGTTTAAGGGTG+CGG | - | tig0026289:3603-3622 | None:intergenic | 45.0% | |
| CTAATTTCGGCCACAATGAG+TGG | + | tig0026289:3775-3794 | Msa1428000:CDS | 45.0% | |
| ACATGTTGTCTTCGATTCCC+TGG | + | tig0026289:3802-3821 | Msa1428000:CDS | 45.0% | |
| CCCTCGTTTGCATTTCTTCA+TGG | + | tig0026289:3873-3892 | Msa1428000:CDS | 45.0% | |
| ATGCTGTCAAATAACGACCG+TGG | - | tig0026289:4014-4033 | None:intergenic | 45.0% | |
| !!! | GAAGCCATTTTAAGACCGGT+TGG | - | tig0026289:4168-4187 | None:intergenic | 45.0% |
| ! | CTTGCATTGGTATACTGGAG+AGG | + | tig0026289:4275-4294 | Msa1428000:CDS | 45.0% |
| TTGGTATACTGGAGAGGGTA+TGG | + | tig0026289:4281-4300 | Msa1428000:CDS | 45.0% | |
| !! | ATTGCTGGTACTCTGAGACA+AGG | - | tig0026289:4347-4366 | None:intergenic | 45.0% |
| CAGTAGCATCTTGGTATTGC+TGG | - | tig0026289:4362-4381 | None:intergenic | 45.0% | |
| CTTCATCTGCAGTAGCATCT+TGG | - | tig0026289:4371-4390 | None:intergenic | 45.0% | |
| AGATGCTACTGCAGATGAAG+AGG | + | tig0026289:4371-4390 | Msa1428000:CDS | 45.0% | |
| GATGCTACTGCAGATGAAGA+GGG | + | tig0026289:4372-4391 | Msa1428000:CDS | 45.0% | |
| ATGCTACTGCAGATGAAGAG+GGG | + | tig0026289:4373-4392 | Msa1428000:CDS | 45.0% | |
| GGGGTATGACTATGAAGATG+AGG | + | tig0026289:4392-4411 | Msa1428000:CDS | 45.0% | |
| AGATGAGGAGGAAGAAGTTC+AGG | + | tig0026289:4407-4426 | Msa1428000:CDS | 45.0% | |
| !! | TACCCCCGAAAAAGGTATTC+AGG | - | tig0026289:4544-4563 | None:intergenic | 45.0% |
| !!! | AATACCTTTTTCGGGGGTAC+TGG | + | tig0026289:4545-4564 | Msa1428000:three_prime_UTR | 45.0% |
| AAATCCAGTACCCCCGAAAA+AGG | - | tig0026289:4552-4571 | None:intergenic | 45.0% | |
| !! | GGGATGTAACGGGTATGTGA+CGG | - | tig0026289:1701-1720 | None:intergenic | 50.0% |
| CACATCCAAGGAGGACAATG+CGG | + | tig0026289:1897-1916 | Msa1428000:CDS | 50.0% | |
| ACATCCAAGGAGGACAATGC+GGG | + | tig0026289:1898-1917 | Msa1428000:CDS | 50.0% | |
| GGACAATGCGGGAACCAAAT+CGG | + | tig0026289:1909-1928 | Msa1428000:CDS | 50.0% | |
| ! | CCCAGAATTTGGCTCCGATT+TGG | - | tig0026289:1926-1945 | None:intergenic | 50.0% |
| GTTGTTCCCTTGGTACCTTC+CGG | - | tig0026289:1982-2001 | None:intergenic | 50.0% | |
| CGTTCCTAGAGCTGTTCTCA+TGG | + | tig0026289:2058-2077 | Msa1428000:CDS | 50.0% | |
| ! | TTCTCATGGATCTGGAGCCA+GGG | + | tig0026289:2072-2091 | Msa1428000:CDS | 50.0% |
| ACTATGGACAGCGTCAGATC+TGG | + | tig0026289:2095-2114 | Msa1428000:CDS | 50.0% | |
| AGCGTCAGATCTGGTCCATA+CGG | + | tig0026289:2104-2123 | Msa1428000:CDS | 50.0% | |
| CGGCCTGATAACTTCGTCTT+TGG | + | tig0026289:2137-2156 | Msa1428000:CDS | 50.0% | |
| ! | ACCTTTCGCCCAGTTGTTTC+CGG | - | tig0026289:2174-2193 | None:intergenic | 50.0% |
| GCGAAAGGTCACTACACTGA+AGG | + | tig0026289:2185-2204 | Msa1428000:CDS | 50.0% | |
| !! | TTTCAGGTTTGCCACTCCCT+TGG | + | tig0026289:3361-3380 | Msa1428000:CDS | 50.0% |
| AGAACCAGTACCACCACCAA+GGG | - | tig0026289:3380-3399 | None:intergenic | 50.0% | |
| !! | TGGTGGTACTGGTTCTGGAA+TGG | + | tig0026289:3384-3403 | Msa1428000:CDS | 50.0% |
| !! | GGTGGTACTGGTTCTGGAAT+GGG | + | tig0026289:3385-3404 | Msa1428000:CDS | 50.0% |
| TGAACCACGAGAAGTGAGTG+GGG | - | tig0026289:3908-3927 | None:intergenic | 50.0% | |
| GTGAACCACGAGAAGTGAGT+GGG | - | tig0026289:3909-3928 | None:intergenic | 50.0% | |
| TGTGAACCACGAGAAGTGAG+TGG | - | tig0026289:3910-3929 | None:intergenic | 50.0% | |
| TCGTGGTTCACAGCAGTACA+GGG | + | tig0026289:3918-3937 | Msa1428000:CDS | 50.0% | |
| CTTCGAATCCCACATCTGCT+GGG | - | tig0026289:3965-3984 | None:intergenic | 50.0% | |
| TCTTCGAATCCCACATCTGC+TGG | - | tig0026289:3966-3985 | None:intergenic | 50.0% | |
| GCTCATCTTACCACGGAACA+TGG | - | tig0026289:4040-4059 | None:intergenic | 50.0% | |
| !! | CCTTGGTGCTCATCTTACCA+CGG | - | tig0026289:4047-4066 | None:intergenic | 50.0% |
| TGGTAAGATGAGCACCAAGG+AGG | + | tig0026289:4047-4066 | Msa1428000:CDS | 50.0% | |
| CATCTGCTCATCAACCTCCT+TGG | - | tig0026289:4064-4083 | None:intergenic | 50.0% | |
| !!! | CCATTTTAAGACCGGTTGGC+GGG | - | tig0026289:4164-4183 | None:intergenic | 50.0% |
| !!! | GCCATTTTAAGACCGGTTGG+CGG | - | tig0026289:4165-4184 | None:intergenic | 50.0% |
| GAGGGTGAGTGAGCAATTCA+CGG | + | tig0026289:4230-4249 | Msa1428000:CDS | 50.0% | |
| ! | TGGAGAGGGTATGGATGAGA+TGG | + | tig0026289:4290-4309 | Msa1428000:CDS | 50.0% |
| TGAGGAGGAAGAAGTTCAGG+AGG | + | tig0026289:4410-4429 | Msa1428000:CDS | 50.0% | |
| GAAGTTGTGTGCGCTGAGCA+CGG | + | tig0026289:1945-1964 | Msa1428000:CDS | 55.0% | |
| AAGTTGTGTGCGCTGAGCAC+GGG | + | tig0026289:1946-1965 | Msa1428000:CDS | 55.0% | |
| !! | ACTCCACCGGAAGGTACCAA+GGG | + | tig0026289:1973-1992 | Msa1428000:CDS | 55.0% |
| ! | GTTCTCATGGATCTGGAGCC+AGG | + | tig0026289:2071-2090 | Msa1428000:CDS | 55.0% |
| GGCCGGAAAATCTGACCGTA+TGG | - | tig0026289:2122-2141 | None:intergenic | 55.0% | |
| CAGAACCAGTACCACCACCA+AGG | - | tig0026289:3381-3400 | None:intergenic | 55.0% | |
| !! | CTTGGTGGTGGTACTGGTTC+TGG | + | tig0026289:3379-3398 | Msa1428000:CDS | 55.0% |
| CTCCGTGTTCCCATCTCCTA+AGG | + | tig0026289:3465-3484 | Msa1428000:CDS | 55.0% | |
| TTTGCCCCACTCACTTCTCG+TGG | + | tig0026289:3901-3920 | Msa1428000:CDS | 55.0% | |
| CTCGTGGTTCACAGCAGTAC+AGG | + | tig0026289:3917-3936 | Msa1428000:CDS | 55.0% | |
| TGAGCTGACCCAGCAGATGT+GGG | + | tig0026289:3954-3973 | Msa1428000:CDS | 55.0% | |
| GTCAAATAACGACCGTGGCG+AGG | - | tig0026289:4009-4028 | None:intergenic | 55.0% | |
| ACAGCATCTGCCATGTTCCG+TGG | + | tig0026289:4027-4046 | Msa1428000:CDS | 55.0% | |
| CCGTGGTAAGATGAGCACCA+AGG | + | tig0026289:4044-4063 | Msa1428000:CDS | 55.0% | |
| TGGCGGGATATCACAGACAG+TGG | - | tig0026289:4148-4167 | None:intergenic | 55.0% | |
| GTCTGTGATATCCCGCCAAC+CGG | + | tig0026289:4150-4169 | Msa1428000:CDS | 55.0% | |
| CCCGCCAACCGGTCTTAAAA+TGG | + | tig0026289:4161-4180 | Msa1428000:CDS | 55.0% | |
| GGTTCCCGCATTGTCCTCCT+TGG | - | tig0026289:1905-1924 | None:intergenic | 60.0% | |
| !! | GACTCCACCGGAAGGTACCA+AGG | + | tig0026289:1972-1991 | Msa1428000:CDS | 60.0% |
| GTTCCCTTGGTACCTTCCGG+TGG | - | tig0026289:1979-1998 | None:intergenic | 60.0% | |
| ! | GGATCTGGAGCCAGGGACTA+TGG | + | tig0026289:2079-2098 | Msa1428000:CDS | 60.0% |
| CTGACGCTGTCCATAGTCCC+TGG | - | tig0026289:2092-2111 | None:intergenic | 60.0% | |
| GTCTTTGGACAGTCCGGTGC+CGG | + | tig0026289:2152-2171 | Msa1428000:CDS | 60.0% | |
| ! | AGTCCGGTGCCGGAAACAAC+TGG | + | tig0026289:2162-2181 | Msa1428000:CDS | 60.0% |
| ! | GTCCGGTGCCGGAAACAACT+GGG | + | tig0026289:2163-2182 | Msa1428000:CDS | 60.0% |
| GCCGGAAACAACTGGGCGAA+AGG | + | tig0026289:2170-2189 | Msa1428000:CDS | 60.0% | |
| CAGGTTTGCCACTCCCTTGG+TGG | + | tig0026289:3364-3383 | Msa1428000:CDS | 60.0% | |
| GTTTGCCACTCCCTTGGTGG+TGG | + | tig0026289:3367-3386 | Msa1428000:CDS | 60.0% | |
| CAGTACCACCACCAAGGGAG+TGG | - | tig0026289:3375-3394 | None:intergenic | 60.0% | |
| !! | CACTCCCTTGGTGGTGGTAC+TGG | + | tig0026289:3373-3392 | Msa1428000:CDS | 60.0% |
| CACATCTGCTGGGTCAGCTC+AGG | - | tig0026289:3955-3974 | None:intergenic | 60.0% | |
| CTGAGCTGACCCAGCAGATG+TGG | + | tig0026289:3953-3972 | Msa1428000:CDS | 60.0% | |
| ! | GAGCACGGGATCGACTCCAC+CGG | + | tig0026289:1960-1979 | Msa1428000:CDS | 65.0% |
| ! | ACGGGATCGACTCCACCGGA+AGG | + | tig0026289:1964-1983 | Msa1428000:CDS | 65.0% |
| ! | CGCCCAGTTGTTTCCGGCAC+CGG | - | tig0026289:2168-2187 | None:intergenic | 65.0% |
| TGCGCTGCTGATCCTCGCCA+CGG | + | tig0026289:3994-4013 | Msa1428000:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026289 | gene | 1697 | 4756 | 1697 | ID=Msa1428000;Name=Msa1428000 |
| tig0026289 | mRNA | 1697 | 4756 | 1697 | ID=Msa1428000-mRNA-1;Parent=Msa1428000;Name=Msa1428000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=185|1|1|1|1|1|3|313|449 |
| tig0026289 | exon | 1697 | 2275 | 1697 | ID=Msa1428000-mRNA-1:exon:5721;Parent=Msa1428000-mRNA-1 |
| tig0026289 | exon | 3359 | 3628 | 3359 | ID=Msa1428000-mRNA-1:exon:5722;Parent=Msa1428000-mRNA-1 |
| tig0026289 | exon | 3758 | 4756 | 3758 | ID=Msa1428000-mRNA-1:exon:5723;Parent=Msa1428000-mRNA-1 |
| tig0026289 | five_prime_UTR | 1697 | 1881 | 1697 | ID=Msa1428000-mRNA-1:five_prime_utr;Parent=Msa1428000-mRNA-1 |
| tig0026289 | CDS | 1882 | 2275 | 1882 | ID=Msa1428000-mRNA-1:cds;Parent=Msa1428000-mRNA-1 |
| tig0026289 | CDS | 3359 | 3628 | 3359 | ID=Msa1428000-mRNA-1:cds;Parent=Msa1428000-mRNA-1 |
| tig0026289 | CDS | 3758 | 4443 | 3758 | ID=Msa1428000-mRNA-1:cds;Parent=Msa1428000-mRNA-1 |
| tig0026289 | three_prime_UTR | 4444 | 4756 | 4444 | ID=Msa1428000-mRNA-1:three_prime_utr;Parent=Msa1428000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
