AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332950 MtrunA17_Chr4g0068511 99.785 929 2 0 1 929 1 929 0.0 1922
Msa1332950 MtrunA17_Chr4g0065401 33.792 654 378 10 216 838 35 664 8.03e-106 344
Msa1332950 MtrunA17_Chr4g0035581 34.206 611 348 10 238 819 152 737 3.11e-102 338
Msa1332950 MtrunA17_Chr4g0052131 38.534 532 294 8 319 819 109 638 6.16e-102 335
Msa1332950 MtrunA17_Chr7g0269941 36.932 528 298 8 304 819 131 635 6.77e-102 333
Msa1332950 MtrunA17_Chr8g0381871 32.929 659 370 12 220 827 20 657 2.11e-97 325
Msa1332950 MtrunA17_Chr2g0296441 31.994 672 377 12 206 827 7 648 7.69e-96 319
Msa1332950 MtrunA17_Chr7g0263661 30.560 661 369 21 231 823 67 705 3.08e-87 296
Msa1332950 MtrunA17_Chr2g0279361 32.953 613 363 16 254 839 41 632 9.21e-84 283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332950 AT1G44900.1 75.628 915 208 6 19 924 20 928 0.0 1363
Msa1332950 AT1G44900.2 75.519 915 207 7 19 924 20 926 0.0 1355
Msa1332950 AT2G16440.1 36.788 579 320 9 266 819 187 744 3.45e-108 354
Msa1332950 AT5G46280.3 39.155 521 288 9 326 819 112 630 5.82e-104 338
Msa1332950 AT5G46280.1 39.155 521 288 9 326 819 112 630 4.02e-103 339
Msa1332950 AT5G46280.2 39.686 509 278 9 326 807 112 618 1.06e-101 330
Msa1332950 AT4G02060.2 36.484 529 301 7 318 834 143 648 5.73e-100 329
Msa1332950 AT4G02060.1 36.484 529 301 7 318 834 143 648 5.73e-100 329
Msa1332950 AT2G07690.1 33.129 652 371 12 219 835 34 655 5.24e-97 321
Msa1332950 AT5G44635.1 35.130 575 305 8 302 827 104 659 1.91e-96 322
Msa1332950 AT5G44635.2 35.315 572 302 8 305 827 107 659 3.72e-96 322
Msa1332950 AT2G07690.2 33.180 654 366 13 219 835 34 653 3.97e-96 318
Msa1332950 AT3G09660.3 33.756 631 350 21 253 823 76 698 1.10e-90 306
Msa1332950 AT5G46280.4 40.263 457 247 8 326 758 112 566 1.28e-90 299
Msa1332950 AT3G09660.2 33.596 634 350 21 253 823 76 701 1.97e-90 304
Msa1332950 AT3G09660.1 33.596 634 350 21 253 823 76 701 3.55e-90 305
Msa1332950 AT2G14050.1 33.892 537 323 13 315 839 117 633 2.16e-82 280
Msa1332950 AT2G14050.2 33.892 537 323 13 315 839 117 633 4.57e-82 278

Find 256 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGAGGAGATTGAAAATT+TGG 0.095183 8_4:+52957550 Msa1332950:CDS
CAAAACTGGCATTTGAAAAT+TGG 0.153921 8_4:-52959876 None:intergenic
TTCTTTATCCAATTCAAAAT+TGG 0.206236 8_4:-52959785 None:intergenic
TGGCAAATGTGGGGCAGTTT+TGG 0.218412 8_4:+52956803 Msa1332950:CDS
TTCATTTCTACCCAAAAGTT+TGG 0.226481 8_4:+52959249 Msa1332950:CDS
ACCTAATAGCCACTGGGTTT+GGG 0.226975 8_4:+52960051 Msa1332950:three_prime_UTR
CTTTCTGCACCCCAAACTTT+TGG 0.230169 8_4:-52959260 None:intergenic
AAGTCTCCATGTTCATTCTT+TGG 0.238314 8_4:-52956263 None:intergenic
AATTGAGACTTTGCTGTTCC+TGG 0.255092 8_4:-52957823 None:intergenic
AGTCTCCATGTTCATTCTTT+GGG 0.267432 8_4:-52956262 None:intergenic
AACCTAATAGCCACTGGGTT+TGG 0.273545 8_4:+52960050 Msa1332950:three_prime_UTR
TAAGAGAAATCTCTTGATAT+TGG 0.279896 8_4:-52960155 None:intergenic
AACAAACCCTTTCTCCAATT+CGG 0.287874 8_4:-52957583 None:intergenic
AAGAGTGGAATAGATGTAAT+TGG 0.289609 8_4:+52960198 Msa1332950:three_prime_UTR
GAGTGTCTTTGTGACCTTCC+AGG 0.294919 8_4:-52955970 None:intergenic
CACTGGGTTTGGGGCCAGTA+TGG 0.299860 8_4:+52960061 Msa1332950:three_prime_UTR
GTTACCTGATATTTCGAATC+TGG 0.302067 8_4:-52956609 None:intergenic
TCATTTCTACCCAAAAGTTT+GGG 0.303343 8_4:+52959250 Msa1332950:CDS
GAAAACCATTCTTTGTGTTC+AGG 0.303531 8_4:-52957445 None:intergenic
ACAAACCCTTTCTCCAATTC+GGG 0.303751 8_4:-52957582 None:intergenic
CCCCAAACCCAGTGGCTATT+AGG 0.319417 8_4:-52960052 None:intergenic
GTCTTCCTGTGTAAGTTTGT+AGG 0.319705 8_4:-52957528 None:intergenic
ACAGTTACAGGCCCTCTAAA+AGG 0.321403 8_4:+52955884 Msa1332950:CDS
GAAGGTGAGGTAGGTGAATC+GGG 0.326947 8_4:-52954972 None:intergenic
TTGAATACAATGATTCGAAT+TGG 0.329550 8_4:+52956720 Msa1332950:CDS
CGTAACCAATGCTTTGCATT+TGG 0.340686 8_4:+52959552 Msa1332950:CDS
TGAATACAATGATTCGAATT+GGG 0.341206 8_4:+52956721 Msa1332950:CDS
CGTCCTGCAGGAACTATTCC+AGG 0.341724 8_4:-52957223 None:intergenic
TAAGAAATCCTTGAATTTCC+TGG 0.343353 8_4:-52956225 None:intergenic
GACATAAATGTTCTTCTTCT+CGG 0.346340 8_4:+52957796 Msa1332950:CDS
GCAATAGCCTTAGCTATGTT+TGG 0.350626 8_4:+52957730 Msa1332950:CDS
CTATACTATAGACAATTTAC+AGG 0.358359 8_4:+52957170 Msa1332950:intron
CTATTCTATATTAGTCTGAT+TGG 0.365042 8_4:+52959976 Msa1332950:three_prime_UTR
TGGAATTGTCACATCTCTTC+AGG 0.367117 8_4:+52958271 Msa1332950:CDS
ATCTTCCTCTTCCTCTGGAT+CGG 0.368288 8_4:-52955093 None:intergenic
ATGACCAGATTCGAAATATC+AGG 0.373434 8_4:+52956605 Msa1332950:CDS
CATACTTAACCTGTTGCAAC+TGG 0.373595 8_4:-52956776 None:intergenic
ACAGGCACCGGGCACCATAC+TGG 0.374113 8_4:-52960075 None:intergenic
AAAGAGGAGATTGAAAATTT+GGG 0.375378 8_4:+52957551 Msa1332950:CDS
ATCGGTTGGGTTGGATGATT+CGG 0.379357 8_4:+52955292 Msa1332950:CDS
TCTCCATCTTCCTCTTCCTC+TGG 0.382680 8_4:-52955098 None:intergenic
TTCGAATCATTGTATTCAAA+TGG 0.384715 8_4:-52956716 None:intergenic
TTCTTCATCCAATACAAAAC+TGG 0.387332 8_4:-52959890 None:intergenic
GTGAACGTAGAGTGCATCTA+TGG 0.389929 8_4:+52959939 Msa1332950:three_prime_UTR
GTCTGAGATGCATTCGCGCA+TGG 0.390090 8_4:-52959173 None:intergenic
CCCTTGTGACTGGATCTTTG+TGG 0.390521 8_4:-52958020 None:intergenic
TGTAGCTAACAAGTGCAGTT+TGG 0.400718 8_4:+52956402 Msa1332950:intron
ATATCGAAACGAGAAATAAT+AGG 0.402565 8_4:-52958542 None:intergenic
TTTCGAATCTGGTCATAAAC+TGG 0.404720 8_4:-52956598 None:intergenic
CTGAGGAAGTTTAGAGCGAT+TGG 0.408232 8_4:-52955399 None:intergenic
GGGTTCGTCGCGGATGATAT+CGG 0.409781 8_4:-52955072 None:intergenic
TGGCAAAGGGGCATCTGCTG+TGG 0.410494 8_4:+52957981 Msa1332950:CDS
TCCATTGCTCCATCAATCTA+TGG 0.416379 8_4:+52957688 Msa1332950:CDS
GTTCTTCTTCTCGGTGATCC+AGG 0.417275 8_4:+52957805 Msa1332950:CDS
GGAAGGTGAGGTAGGTGAAT+CGG 0.421992 8_4:-52954973 None:intergenic
ATACGGATGATGACAGTTAC+AGG 0.426652 8_4:+52955872 Msa1332950:CDS
TTTGCTTACCTCCCTCCAAT+TGG 0.430391 8_4:-52958323 None:intergenic
TGGCATGCCAGATGCATCTT+GGG 0.430722 8_4:-52958760 None:intergenic
ATCGTCTTCAGATGCGCGGC+TGG 0.430731 8_4:-52955033 None:intergenic
TTCAAGGAACTCTTAGAGAA+TGG 0.434661 8_4:+52956171 Msa1332950:CDS
TCTTCCTCTTCCTCTGGATC+GGG 0.435930 8_4:-52955092 None:intergenic
TCTGCTGCTCCATGGCTTCA+TGG 0.436038 8_4:-52958229 None:intergenic
AGCTAGCCAAATGGCAATGT+TGG 0.437518 8_4:-52956458 None:intergenic
ACTAGTGTTAATTACCTTGA+AGG 0.439442 8_4:-52959638 None:intergenic
AAAACCATTCTTTGTGTTCA+GGG 0.440084 8_4:-52957444 None:intergenic
TCCATCCCAACATTGCCATT+TGG 0.443662 8_4:+52956452 Msa1332950:CDS
TCATCGTGACCATAGATTGA+TGG 0.444357 8_4:-52957697 None:intergenic
CATCTACTTTGATATCTACA+TGG 0.455001 8_4:-52959609 None:intergenic
CCGAGCGACGATGATCTTGA+TGG 0.458608 8_4:+52955934 Msa1332950:CDS
TTGGCATGCCAGATGCATCT+TGG 0.460989 8_4:-52958761 None:intergenic
ACAAGGGAATGGACCCTTGA+GGG 0.463606 8_4:+52958036 Msa1332950:CDS
GGAGTTGTAACCAGGCGCTC+TGG 0.464061 8_4:+52956744 Msa1332950:CDS
CATTGCATCTATGAGCGTTA+AGG 0.465349 8_4:-52960269 None:intergenic
GGCAAAGGGGCATCTGCTGT+GGG 0.469869 8_4:+52957982 Msa1332950:CDS
ATCCACAATCCAACAGGCAC+CGG 0.473893 8_4:-52960087 None:intergenic
AGTAGATGATCTCTCCTTCA+AGG 0.474470 8_4:+52959624 Msa1332950:CDS
AGGGTCCATTCCCTTGTGAC+TGG 0.475877 8_4:-52958030 None:intergenic
TATGAGATGTACCGTGTTCA+AGG 0.476676 8_4:+52956155 Msa1332950:CDS
GGTTCGTCGCGGATGATATC+GGG 0.477660 8_4:-52955071 None:intergenic
CAATCAGACTAATATAGAAT+AGG 0.478187 8_4:-52959975 None:intergenic
GTATGGTGCCCGGTGCCTGT+TGG 0.479156 8_4:+52960078 Msa1332950:three_prime_UTR
TTACCTCCCTCCAATTGGAT+TGG 0.479361 8_4:-52958318 None:intergenic
TCTGAGATGCATTCGCGCAT+GGG 0.480022 8_4:-52959172 None:intergenic
TTTCATAGCCAGGAAATTCA+AGG 0.480432 8_4:+52956217 Msa1332950:CDS
GGTCAAGAAAAGAATGTTGA+AGG 0.480571 8_4:+52957754 Msa1332950:CDS
ATTGCTGCTGCCAATCCAAT+TGG 0.480683 8_4:+52958308 Msa1332950:CDS
CATTTGGAAGACATTCTCAC+TGG 0.481401 8_4:+52959568 Msa1332950:CDS
AATCAGCATCATGTAACCTT+GGG 0.481849 8_4:-52958947 None:intergenic
TCACTTCAAGTCACAACCTA+AGG 0.481858 8_4:+52958710 Msa1332950:CDS
GTTCACTGTCAATATTGAAC+AGG 0.481960 8_4:+52956896 Msa1332950:CDS
TCAAGGAACTCTTAGAGAAT+GGG 0.482239 8_4:+52956172 Msa1332950:CDS
CCGATCAGTTCGAATCGGTT+GGG 0.487780 8_4:+52955279 Msa1332950:CDS
CAGTTACAGGCCCTCTAAAA+GGG 0.492794 8_4:+52955885 Msa1332950:CDS
CTGTATACACCACTGGCAAA+GGG 0.493275 8_4:+52957968 Msa1332950:CDS
ATTACTTCTAAAACAGAATG+AGG 0.493415 8_4:-52956487 None:intergenic
CTGATTGACTGTGCTCGACC+TGG 0.494038 8_4:+52957283 Msa1332950:CDS
GCAAGCATTTCATCAGTGAC+TGG 0.494579 8_4:-52958669 None:intergenic
TTCAATGTGCCTTACAGCGA+TGG 0.494731 8_4:-52959127 None:intergenic
GGGGAAAACTCCAGAGCGCC+TGG 0.494777 8_4:-52956754 None:intergenic
AAGTGCGCCGTTTCATAGCC+AGG 0.495372 8_4:+52956207 Msa1332950:CDS
TCTTATTCAGAGGTGAAAGT+TGG 0.496205 8_4:+52956843 Msa1332950:CDS
GCCGATCAGTTCGAATCGGT+TGG 0.497145 8_4:+52955278 Msa1332950:CDS
CGAACCCGATCCAGAGGAAG+AGG 0.498092 8_4:+52955088 Msa1332950:CDS
GGCACATTGAATCAATGATA+AGG 0.501245 8_4:+52959139 Msa1332950:CDS
AAATCAGCATCATGTAACCT+TGG 0.502494 8_4:-52958948 None:intergenic
AGCGAGTCCCAAGATGCATC+TGG 0.502747 8_4:+52958753 Msa1332950:CDS
GTCTTCCAAATGCAAAGCAT+TGG 0.502858 8_4:-52959557 None:intergenic
GAATACAATGATTCGAATTG+GGG 0.503038 8_4:+52956722 Msa1332950:CDS
TTGTCCCTGAACACAAAGAA+TGG 0.503280 8_4:+52957440 Msa1332950:CDS
CTGGTCATAAACTGGTAAGT+TGG 0.504195 8_4:-52956590 None:intergenic
TGCTCATTTATATTCTCCGT+GGG 0.504409 8_4:+52959527 Msa1332950:CDS
GAGTCATTGTTACCACCCTT+AGG 0.504496 8_4:-52958726 None:intergenic
TTTGGGGCCAGTATGGTGCC+CGG 0.504537 8_4:+52960068 Msa1332950:three_prime_UTR
GCTAGCCAAATGGCAATGTT+GGG 0.504935 8_4:-52956457 None:intergenic
CCTTGGGAAAACATTCAACT+TGG 0.505272 8_4:-52958931 None:intergenic
TGAATTTCCTGGCTATGAAA+CGG 0.505781 8_4:-52956214 None:intergenic
GATCCAGAGGAAGAGGAAGA+TGG 0.505978 8_4:+52955095 Msa1332950:CDS
TGTCCTGAGTGTCAATCAAA+AGG 0.507261 8_4:+52956870 Msa1332950:CDS
AGCATAAGCATATCAAAAGC+TGG 0.507543 8_4:+52958251 Msa1332950:CDS
AGAAGACCTGTGATCAGCTC+TGG 0.507814 8_4:-52955908 None:intergenic
CAGACGATCCACAATCCAAC+AGG 0.508919 8_4:-52960093 None:intergenic
GTGAGGACCTCTGGGTCAGT+TGG 0.510672 8_4:-52958780 None:intergenic
AGCAAATACATAACATTCAA+AGG 0.513388 8_4:-52960000 None:intergenic
CTGATAAGTGAAATGGTGTC+AGG 0.514144 8_4:+52956299 Msa1332950:CDS
AAGGAGTCCCCATCGCTGTA+AGG 0.515892 8_4:+52959118 Msa1332950:CDS
GCTTATGCTCTGCTGCTCCA+TGG 0.516044 8_4:-52958237 None:intergenic
GAGCTAGAAGAGAAGAATCA+TGG 0.516515 8_4:+52954926 Msa1332950:exon
TCAGTTCGAATCGGTTGGGT+TGG 0.522218 8_4:+52955283 Msa1332950:CDS
AAGTTGATCGGTGTTAAAAC+CGG 0.523985 8_4:-52954997 None:intergenic
CCTAATAGCCACTGGGTTTG+GGG 0.525134 8_4:+52960052 Msa1332950:three_prime_UTR
TATCTCGGCAGTCGTCCTGC+AGG 0.528983 8_4:-52957235 None:intergenic
GCTGTATACACCACTGGCAA+AGG 0.529151 8_4:+52957967 Msa1332950:CDS
GGTGCAGAAAGCACTGCAAA+AGG 0.532915 8_4:+52959272 Msa1332950:CDS
CTCACTCTTCAAGAGAGCCC+TGG 0.535554 8_4:+52957205 Msa1332950:CDS
AAATATGCTGCTGTTGAAGA+AGG 0.537530 8_4:-52959755 None:intergenic
TCCTCTGTCAGCTAGAACAA+GGG 0.542346 8_4:-52958064 None:intergenic
AGCAGATGCCCCTTTGCCAG+TGG 0.542513 8_4:-52957977 None:intergenic
AGTATCACTTCCTTGTATCT+CGG 0.542848 8_4:-52957250 None:intergenic
TGGGTTGGATGATTCGGTTG+AGG 0.542927 8_4:+52955298 Msa1332950:CDS
AAATGAGGATGATCAATATG+AGG 0.542946 8_4:+52956020 Msa1332950:CDS
AGGACGACTGCCGAGATACA+AGG 0.546392 8_4:+52957240 Msa1332950:CDS
CGATATCCTCTGCGTTGTGA+AGG 0.548274 8_4:+52958559 Msa1332950:CDS
TCCACAATCCAACAGGCACC+GGG 0.549026 8_4:-52960086 None:intergenic
GCCCGGTGCCTGTTGGATTG+TGG 0.549433 8_4:+52960085 Msa1332950:three_prime_UTR
TCAATGTGCCTTACAGCGAT+GGG 0.550127 8_4:-52959126 None:intergenic
TACTTAACCTGTTGCAACTG+GGG 0.551301 8_4:-52956774 None:intergenic
TTCCTCTGTCAGCTAGAACA+AGG 0.553579 8_4:-52958065 None:intergenic
TTGACCTCCAAACATAGCTA+AGG 0.554023 8_4:-52957737 None:intergenic
GATCTTACAATCTCTTCTCC+AGG 0.555605 8_4:-52957301 None:intergenic
CTCTAAGAGTTCCTTGAACA+CGG 0.557484 8_4:-52956166 None:intergenic
AAGTATGACTGTGGCAAATG+TGG 0.558528 8_4:+52956792 Msa1332950:CDS
TGTGCGTCTGATAAGTGAAA+TGG 0.559703 8_4:+52956292 Msa1332950:CDS
AGGTGCATCAGCTAGCCAAA+TGG 0.560236 8_4:-52956467 None:intergenic
ATAGCCTTAGCTATGTTTGG+AGG 0.560247 8_4:+52957733 Msa1332950:CDS
ATTGGTTGCTGTTGAACAAG+GGG 0.562474 8_4:-52959858 None:intergenic
GCTGCTGCCAATCCAATTGG+AGG 0.564451 8_4:+52958311 Msa1332950:CDS
AGCCCTGGAATAGTTCCTGC+AGG 0.565620 8_4:+52957220 Msa1332950:CDS
AACAGTGATTATCAGAGGAT+GGG 0.566353 8_4:+52955251 Msa1332950:intron
ATGCTCATTTATATTCTCCG+TGG 0.566494 8_4:+52959526 Msa1332950:CDS
AAGATCCAGTCACAAGGGAA+TGG 0.567232 8_4:+52958025 Msa1332950:CDS
TCTCTTGTTTAGCACGGACA+AGG 0.568024 8_4:+52959099 Msa1332950:intron
GAACAGTGATTATCAGAGGA+TGG 0.570324 8_4:+52955250 Msa1332950:intron
TCCAACTACTGATCAAAATG+AGG 0.571804 8_4:+52956005 Msa1332950:CDS
TACTTCTTCAACAGATCTTG+AGG 0.573458 8_4:-52958897 None:intergenic
GCCAAATGGCAATGTTGGGA+TGG 0.574556 8_4:-52956453 None:intergenic
GTCAAGAAAAGAATGTTGAA+GGG 0.576184 8_4:+52957755 Msa1332950:CDS
GCATGTCATACAAGAGGATG+TGG 0.578147 8_4:+52959197 Msa1332950:CDS
ATACTTAACCTGTTGCAACT+GGG 0.578409 8_4:-52956775 None:intergenic
AAAGGGCCAGAGCTGATCAC+AGG 0.581068 8_4:+52955902 Msa1332950:CDS
ACAGAACAGTCAAGAAAGAG+TGG 0.582965 8_4:+52960183 Msa1332950:three_prime_UTR
ATCTACTTTGATATCTACAT+GGG 0.586006 8_4:-52959608 None:intergenic
ACAAGATGAATGACCAGGAT+CGG 0.587394 8_4:+52958109 Msa1332950:CDS
TGAAGCCGATCAGTTCGAAT+CGG 0.588426 8_4:+52955274 Msa1332950:CDS
AGTATGACTGTGGCAAATGT+GGG 0.588814 8_4:+52956793 Msa1332950:CDS
AAATTGGTTGCTGTTGAACA+AGG 0.588962 8_4:-52959860 None:intergenic
AAGGGAATGGACCCTTGAGG+GGG 0.591353 8_4:+52958038 Msa1332950:CDS
GTTTAGAGCGATTGGAAGCG+CGG 0.591434 8_4:-52955391 None:intergenic
GCGCGGCTGGTGTGAGTGTG+AGG 0.592379 8_4:-52955020 None:intergenic
ATTTGACAAGATGAATGACC+AGG 0.592449 8_4:+52958104 Msa1332950:CDS
GTATGTGATGGGTTCTATTG+TGG 0.593711 8_4:+52960310 Msa1332950:three_prime_UTR
ACCATAGATTGATGGAGCAA+TGG 0.593829 8_4:-52957689 None:intergenic
CATACAAGAGGATGTGGACA+TGG 0.595431 8_4:+52959203 Msa1332950:CDS
TAAGTTTGTAGGCAGAGAAG+AGG 0.596527 8_4:-52957517 None:intergenic
CATTTCTACCCAAAAGTTTG+GGG 0.599413 8_4:+52959251 Msa1332950:CDS
GTTAAAACCGGCGGAAGGTG+AGG 0.602963 8_4:-52954985 None:intergenic
CTCTGCCTACAAACTTACAC+AGG 0.603392 8_4:+52957523 Msa1332950:CDS
GGTAAGTATCCATGAAGCCA+TGG 0.605274 8_4:+52958220 Msa1332950:CDS
CACTTCAAGTCACAACCTAA+GGG 0.605500 8_4:+52958711 Msa1332950:CDS
ACTTACACAGGAAGACAAAG+AGG 0.607054 8_4:+52957535 Msa1332950:CDS
CGAGCGACGATGATCTTGAT+GGG 0.607601 8_4:+52955935 Msa1332950:CDS
GAAATGGTTTACCTCCGTCA+TGG 0.607967 8_4:-52955427 None:intergenic
CAGAGAGCTGTATACACCAC+TGG 0.608206 8_4:+52957961 Msa1332950:CDS
TCACCTACCTCACCTTCCGC+CGG 0.609324 8_4:+52954978 Msa1332950:CDS
GAAGGTCACAAAGACACTCA+AGG 0.609959 8_4:+52955974 Msa1332950:CDS
AGTAGCCTGTGAGTATGTGA+TGG 0.612486 8_4:+52960298 Msa1332950:three_prime_UTR
TCCACAAAGATCCAGTCACA+AGG 0.613359 8_4:+52958019 Msa1332950:CDS
CCATCAAGATCATCGTCGCT+CGG 0.615269 8_4:-52955934 None:intergenic
AAACCGGCGGAAGGTGAGGT+AGG 0.615670 8_4:-52954981 None:intergenic
GGATGAATAGTTCACCTGGA+AGG 0.618854 8_4:+52955956 Msa1332950:CDS
GATGCACTCTACGTTCACCT+AGG 0.619069 8_4:-52959934 None:intergenic
ACTTAACCTGTTGCAACTGG+GGG 0.621176 8_4:-52956773 None:intergenic
TTATCAGACATTATCTCACT+AGG 0.621430 8_4:+52959815 Msa1332950:CDS
CTGCTGCCAATCCAATTGGA+GGG 0.622054 8_4:+52958312 Msa1332950:CDS
GTCCTGCAGGAACTATTCCA+GGG 0.622175 8_4:-52957222 None:intergenic
GATGGGATGAATAGTTCACC+TGG 0.623036 8_4:+52955952 Msa1332950:CDS
AGAACCCATCACATACTCAC+AGG 0.623430 8_4:-52960303 None:intergenic
CCGCGACGAACCCGATCCAG+AGG 0.623555 8_4:+52955082 Msa1332950:CDS
AAGCATTGGTTACGAGCCCA+CGG 0.623624 8_4:-52959543 None:intergenic
AAGGTGAGGTAGGTGAATCG+GGG 0.624645 8_4:-52954971 None:intergenic
GAGTGATCAGACATAACCCT+AGG 0.624705 8_4:+52959917 Msa1332950:three_prime_UTR
TGTTCAATATTGACAGTGAA+CGG 0.624894 8_4:-52956894 None:intergenic
CCTCCGTCATGGAGAAGCTG+AGG 0.625957 8_4:-52955416 None:intergenic
CAGACAGCATGTCATACAAG+AGG 0.626182 8_4:+52959191 Msa1332950:CDS
CTTCCTCAGCTTCTCCATGA+CGG 0.627552 8_4:+52955413 Msa1332950:CDS
GTGAGTGTGAGGAAGTTGAT+CGG 0.633005 8_4:-52955009 None:intergenic
GTCAACCCAAAGAATGAACA+TGG 0.633377 8_4:+52956257 Msa1332950:CDS
AAACCCTTTCTCCAATTCGG+GGG 0.636685 8_4:-52957580 None:intergenic
TCGGTGTTAAAACCGGCGGA+AGG 0.636744 8_4:-52954990 None:intergenic
AAGGTCACAAAGACACTCAA+GGG 0.639389 8_4:+52955975 Msa1332950:CDS
AGGGAATGGACCCTTGAGGG+GGG 0.639868 8_4:+52958039 Msa1332950:CDS
ATGCACTCTACGTTCACCTA+GGG 0.640354 8_4:-52959933 None:intergenic
GTAGCCTGTGAGTATGTGAT+GGG 0.641506 8_4:+52960299 Msa1332950:three_prime_UTR
CCCAACCGATTCGAACTGAT+CGG 0.645751 8_4:-52955279 None:intergenic
GCGGATGATATCGGGATCAA+CGG 0.645795 8_4:-52955063 None:intergenic
CAAACCCTTTCTCCAATTCG+GGG 0.646236 8_4:-52957581 None:intergenic
AATATGCTGCTGTTGAAGAA+GGG 0.649591 8_4:-52959754 None:intergenic
AATACAATGATTCGAATTGG+GGG 0.654718 8_4:+52956723 Msa1332950:CDS
TGTATACGCAGAACTGCGGA+AGG 0.656499 8_4:+52958986 Msa1332950:CDS
ATAATTAGCCTCAACAACAG+TGG 0.656678 8_4:-52957477 None:intergenic
AATTGGTTGCTGTTGAACAA+GGG 0.657542 8_4:-52959859 None:intergenic
CACAAGGGAATGGACCCTTG+AGG 0.658865 8_4:+52958035 Msa1332950:CDS
CAAGGGAATGGACCCTTGAG+GGG 0.660264 8_4:+52958037 Msa1332950:CDS
TGGCATGCCAACTGACCCAG+AGG 0.667836 8_4:+52958773 Msa1332950:CDS
TGTATACACCACTGGCAAAG+GGG 0.670745 8_4:+52957969 Msa1332950:CDS
CACATGTATACGCAGAACTG+CGG 0.673650 8_4:+52958982 Msa1332950:CDS
TGTTGAACAGTGATTATCAG+AGG 0.677031 8_4:+52955246 Msa1332950:intron
TTTGTATTGGATGAAGAACG+AGG 0.680156 8_4:+52959895 Msa1332950:three_prime_UTR
GCCCTTGTTCTAGCTGACAG+AGG 0.681239 8_4:+52958063 Msa1332950:CDS
TTTGAATTGGATAAAGAACG+AGG 0.681398 8_4:+52959790 Msa1332950:CDS
ATTGAACTTGATACTCGTGA+TGG 0.682549 8_4:+52955368 Msa1332950:CDS
CTGCCAATCCAATTGGAGGG+AGG 0.686702 8_4:+52958315 Msa1332950:CDS
TCAACAACAGTGGAAAACAC+CGG 0.688586 8_4:-52957467 None:intergenic
GTCACAAAGACACTCAAGGG+AGG 0.689454 8_4:+52955978 Msa1332950:CDS
CAACAGGTTAAGTATGACTG+TGG 0.692160 8_4:+52956783 Msa1332950:CDS
CCACAAAGATCCAGTCACAA+GGG 0.693381 8_4:+52958020 Msa1332950:CDS
CCTCTGGATCGGGTTCGTCG+CGG 0.697963 8_4:-52955082 None:intergenic
CAATGTGCCTTACAGCGATG+GGG 0.701292 8_4:-52959125 None:intergenic
TTCAAGTCACAACCTAAGGG+TGG 0.701623 8_4:+52958714 Msa1332950:CDS
AGGTGAGGTAGGTGAATCGG+GGG 0.705990 8_4:-52954970 None:intergenic
CTTCATCGTCTTCAGATGCG+CGG 0.707204 8_4:-52955037 None:intergenic
ACATTACCTTCACAACGCAG+AGG 0.708664 8_4:-52958565 None:intergenic
GAAGGGAAGCATAGACTACG+AGG 0.719952 8_4:+52957772 Msa1332950:CDS
CCTCAGCTTCTCCATGACGG+AGG 0.720807 8_4:+52955416 Msa1332950:CDS
TTGATCGGTGTTAAAACCGG+CGG 0.721341 8_4:-52954994 None:intergenic
CATACTGGCCCCAAACCCAG+TGG 0.727107 8_4:-52960060 None:intergenic
GTATGACTGTGGCAAATGTG+GGG 0.732262 8_4:+52956794 Msa1332950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGAATTGATACTAATTTT+GGG + chr8_4:52955634-52955653 Msa1332950:intron 15.0%
!!! CTATCTTGTTATTTTATTTA+CGG + chr8_4:52956093-52956112 Msa1332950:intron 15.0%
!!! TATCTTGTTATTTTATTTAC+GGG + chr8_4:52956094-52956113 Msa1332950:intron 15.0%
!! AACAATAATCAATATGAATT+GGG - chr8_4:52956996-52957015 None:intergenic 15.0%
!! ATATTCTGATAAAAAAATTC+AGG + chr8_4:52957385-52957404 Msa1332950:intron 15.0%
!! ATCAACAACAAATAATTAAA+TGG - chr8_4:52957638-52957657 None:intergenic 15.0%
!!! ATTTAATTATTTGTTGTTGA+TGG + chr8_4:52957637-52957656 Msa1332950:intron 15.0%
!!! AGTCTTCTTTTAATTTTTAA+TGG + chr8_4:52957878-52957897 Msa1332950:intron 15.0%
!!! TTACAAATTACTTTTTCTTT+TGG + chr8_4:52959352-52959371 Msa1332950:intron 15.0%
!!! GATTCAAAAACTTTTTAAAT+TGG - chr8_4:52960119-52960138 None:intergenic 15.0%
!! AATGAAAAAAAGAGAAATAG+AGG - chr8_4:52955158-52955177 None:intergenic 20.0%
!!! GAATGAATTGATACTAATTT+TGG + chr8_4:52955633-52955652 Msa1332950:intron 20.0%
!!! ATGAATTGATACTAATTTTG+GGG + chr8_4:52955635-52955654 Msa1332950:intron 20.0%
!!! ATTGTTTTTTAGAATGAACA+TGG + chr8_4:52955698-52955717 Msa1332950:intron 20.0%
!! GAAATACTTAGATTTATTGT+TGG + chr8_4:52955784-52955803 Msa1332950:intron 20.0%
!!! TTTATTGTTGGTTTAGTTTT+TGG + chr8_4:52955796-52955815 Msa1332950:intron 20.0%
!! TATAATGACTTATAAGATGT+TGG + chr8_4:52955821-52955840 Msa1332950:intron 20.0%
!!! ATCTTGTTATTTTATTTACG+GGG + chr8_4:52956095-52956114 Msa1332950:intron 20.0%
!!! GAATAAGAATTCTGAAAAAA+TGG - chr8_4:52956831-52956850 None:intergenic 20.0%
!!! TAACTTATTTTGCAAAACTT+TGG - chr8_4:52956952-52956971 None:intergenic 20.0%
!!! TTTTGCAAAATAAGTTAAGA+AGG + chr8_4:52956955-52956974 Msa1332950:intron 20.0%
!! GAACAATAATCAATATGAAT+TGG - chr8_4:52956997-52957016 None:intergenic 20.0%
!!! AACGAATTATAGAACTTTTT+TGG + chr8_4:52957082-52957101 Msa1332950:intron 20.0%
!! AAGAAGACTATAAATAACAA+AGG - chr8_4:52957867-52957886 None:intergenic 20.0%
!! CACTAAGATAAATATTATCA+GGG + chr8_4:52958199-52958218 Msa1332950:intron 20.0%
!!! AACTACTGATTACTAATATA+TGG + chr8_4:52958423-52958442 Msa1332950:intron 20.0%
!!! ATTACTATAGTGATTTTGAT+TGG + chr8_4:52959402-52959421 Msa1332950:intron 20.0%
!! TTCTTTATCCAATTCAAAAT+TGG - chr8_4:52959788-52959807 None:intergenic 20.0%
!!! TTAAAAAGTTTTTGAATCGT+TGG + chr8_4:52960121-52960140 Msa1332950:three_prime_UTR 20.0%
! GAAATGAAATGAAAGAGAAA+TGG - chr8_4:52955446-52955465 None:intergenic 25.0%
! ATGCTTAGTTACTACTATTT+AGG + chr8_4:52955503-52955522 Msa1332950:intron 25.0%
! TGCTTAGTTACTACTATTTA+GGG + chr8_4:52955504-52955523 Msa1332950:intron 25.0%
!!! TTGCAAATGCTATGTTTTTT+AGG + chr8_4:52955571-52955590 Msa1332950:intron 25.0%
!!! GTATTGTAATTTGTTAGTGA+CGG + chr8_4:52955667-52955686 Msa1332950:intron 25.0%
!!! TTTTAGAATGAACATGGATT+AGG + chr8_4:52955704-52955723 Msa1332950:intron 25.0%
!!! ATGCTTATTTTATGCGAATT+AGG + chr8_4:52955759-52955778 Msa1332950:intron 25.0%
!!! TGCTTATTTTATGCGAATTA+GGG + chr8_4:52955760-52955779 Msa1332950:intron 25.0%
! AAAAGACACAATAAATTAGC+TGG - chr8_4:52956380-52956399 None:intergenic 25.0%
!!! ATTACTTCTAAAACAGAATG+AGG - chr8_4:52956490-52956509 None:intergenic 25.0%
!!! TCATTCTGTTTTAGAAGTAA+TGG + chr8_4:52956489-52956508 Msa1332950:CDS 25.0%
! TTCGAATCATTGTATTCAAA+TGG - chr8_4:52956719-52956738 None:intergenic 25.0%
! TTGAATACAATGATTCGAAT+TGG + chr8_4:52956720-52956739 Msa1332950:CDS 25.0%
! TGAATACAATGATTCGAATT+GGG + chr8_4:52956721-52956740 Msa1332950:CDS 25.0%
!! TTTTCAGAATTCTTATTCAG+AGG + chr8_4:52956833-52956852 Msa1332950:CDS 25.0%
! CTATACTATAGACAATTTAC+AGG + chr8_4:52957170-52957189 Msa1332950:intron 25.0%
! ATATAAACAAGTCAAAGTAG+AGG - chr8_4:52957326-52957345 None:intergenic 25.0%
!!! CTACTTTGACTTGTTTATAT+TGG + chr8_4:52957326-52957345 Msa1332950:intron 25.0%
! TTCTGATAAAAAAATTCAGG+AGG + chr8_4:52957388-52957407 Msa1332950:intron 25.0%
! AAAGAGGAGATTGAAAATTT+GGG + chr8_4:52957551-52957570 Msa1332950:CDS 25.0%
! AAATACAACTAGAAGTTCTA+AGG - chr8_4:52957609-52957628 None:intergenic 25.0%
! CCTGATAATATTTATCTTAG+TGG - chr8_4:52958201-52958220 None:intergenic 25.0%
! CCACTAAGATAAATATTATC+AGG + chr8_4:52958198-52958217 Msa1332950:intron 25.0%
!!! GGTTTAGTTTCAATTTTATG+AGG + chr8_4:52958444-52958463 Msa1332950:intron 25.0%
! ATATCGAAACGAGAAATAAT+AGG - chr8_4:52958545-52958564 None:intergenic 25.0%
! TTACCTTAAATTGATGTTAC+TGG - chr8_4:52958822-52958841 None:intergenic 25.0%
! CTTGTGGTTATTATTTGTAA+GGG + chr8_4:52959053-52959072 Msa1332950:intron 25.0%
! AAATCACTATAGTAATGTGA+TGG - chr8_4:52959398-52959417 None:intergenic 25.0%
! ATCTACTTTGATATCTACAT+GGG - chr8_4:52959611-52959630 None:intergenic 25.0%
! CAGTTAGAAAACAAACATAA+AGG - chr8_4:52959664-52959683 None:intergenic 25.0%
!!! TTATGTTTGTTTTCTAACTG+AGG + chr8_4:52959664-52959683 Msa1332950:intron 25.0%
!! TTCAAATGCCAATTTTGAAT+TGG + chr8_4:52959777-52959796 Msa1332950:CDS 25.0%
!!! TGCATCTATGGATTTATTTT+TGG + chr8_4:52959951-52959970 Msa1332950:three_prime_UTR 25.0%
! CAATCAGACTAATATAGAAT+AGG - chr8_4:52959978-52959997 None:intergenic 25.0%
!! CTATTCTATATTAGTCTGAT+TGG + chr8_4:52959976-52959995 Msa1332950:three_prime_UTR 25.0%
! AGCAAATACATAACATTCAA+AGG - chr8_4:52960003-52960022 None:intergenic 25.0%
! TAAGAGAAATCTCTTGATAT+TGG - chr8_4:52960158-52960177 None:intergenic 25.0%
! TTTCATCATATCTACATCTT+TGG + chr8_4:52960242-52960261 Msa1332950:intron 25.0%
! GTTACTACTATTTAGGGTTT+AGG + chr8_4:52955510-52955529 Msa1332950:intron 30.0%
!! GATACTAATTTTGGGGAAAT+TGG + chr8_4:52955642-52955661 Msa1332950:intron 30.0%
TGAACTTTGTATTGCAGATA+CGG + chr8_4:52955855-52955874 Msa1332950:intron 30.0%
AAATGAGGATGATCAATATG+AGG + chr8_4:52956020-52956039 Msa1332950:CDS 30.0%
TAAGAAATCCTTGAATTTCC+TGG - chr8_4:52956228-52956247 None:intergenic 30.0%
!!! ACTATTAGTTTTTCATCCAG+TGG - chr8_4:52956673-52956692 None:intergenic 30.0%
GAATACAATGATTCGAATTG+GGG + chr8_4:52956722-52956741 Msa1332950:CDS 30.0%
AATACAATGATTCGAATTGG+GGG + chr8_4:52956723-52956742 Msa1332950:CDS 30.0%
TGTTCAATATTGACAGTGAA+CGG - chr8_4:52956897-52956916 None:intergenic 30.0%
TGCAAAATAAGTTAAGAAGG+AGG + chr8_4:52956958-52956977 Msa1332950:intron 30.0%
TTATTGTTCTTCACTTTGAC+TGG + chr8_4:52957008-52957027 Msa1332950:intron 30.0%
TATTGTTCTTCACTTTGACT+GGG + chr8_4:52957009-52957028 Msa1332950:intron 30.0%
TGCTACAGTACATCTAAATT+TGG - chr8_4:52957057-52957076 None:intergenic 30.0%
AAAACCATTCTTTGTGTTCA+GGG - chr8_4:52957447-52957466 None:intergenic 30.0%
CAAAGAGGAGATTGAAAATT+TGG + chr8_4:52957550-52957569 Msa1332950:CDS 30.0%
GTCAAGAAAAGAATGTTGAA+GGG + chr8_4:52957755-52957774 Msa1332950:CDS 30.0%
GACATAAATGTTCTTCTTCT+CGG + chr8_4:52957796-52957815 Msa1332950:CDS 30.0%
GTCAGATATGTTGAAAAAAC+TGG + chr8_4:52957937-52957956 Msa1332950:intron 30.0%
! GATTGAGTTCTTGATTTTAC+AGG + chr8_4:52958635-52958654 Msa1332950:intron 30.0%
! TCTGTGACTCAAAACATTTT+TGG + chr8_4:52958857-52958876 Msa1332950:intron 30.0%
TTCGTTAAGTAAAAAGAGAC+AGG - chr8_4:52959027-52959046 None:intergenic 30.0%
! ACTTAACGAAATTTTGCTTG+TGG + chr8_4:52959037-52959056 Msa1332950:intron 30.0%
GCTTGTGGTTATTATTTGTA+AGG + chr8_4:52959052-52959071 Msa1332950:intron 30.0%
! TCTTATTCTCTTGTTTAGCA+CGG + chr8_4:52959093-52959112 Msa1332950:intron 30.0%
TTCATTTCTACCCAAAAGTT+TGG + chr8_4:52959249-52959268 Msa1332950:CDS 30.0%
TCATTTCTACCCAAAAGTTT+GGG + chr8_4:52959250-52959269 Msa1332950:CDS 30.0%
CAAATGCTCTTCCTAAAATA+CGG + chr8_4:52959447-52959466 Msa1332950:intron 30.0%
! CAATATCAAGACCGTATTTT+AGG - chr8_4:52959461-52959480 None:intergenic 30.0%
CATCTACTTTGATATCTACA+TGG - chr8_4:52959612-52959631 None:intergenic 30.0%
ACTAGTGTTAATTACCTTGA+AGG - chr8_4:52959641-52959660 None:intergenic 30.0%
TTTGAATTGGATAAAGAACG+AGG + chr8_4:52959790-52959809 Msa1332950:CDS 30.0%
TTATCAGACATTATCTCACT+AGG + chr8_4:52959815-52959834 Msa1332950:CDS 30.0%
CAAAACTGGCATTTGAAAAT+TGG - chr8_4:52959879-52959898 None:intergenic 30.0%
!! TTCAAATGCCAGTTTTGTAT+TGG + chr8_4:52959882-52959901 Msa1332950:three_prime_UTR 30.0%
TTCTTCATCCAATACAAAAC+TGG - chr8_4:52959893-52959912 None:intergenic 30.0%
!!! TATTTTAACCTAATAGCCAC+TGG + chr8_4:52960044-52960063 Msa1332950:three_prime_UTR 30.0%
!! ATTTTAACCTAATAGCCACT+GGG + chr8_4:52960045-52960064 Msa1332950:three_prime_UTR 30.0%
AAGAGTGGAATAGATGTAAT+TGG + chr8_4:52960198-52960217 Msa1332950:three_prime_UTR 30.0%
!! AAGTTGATCGGTGTTAAAAC+CGG - chr8_4:52955000-52955019 None:intergenic 35.0%
TGTTGAACAGTGATTATCAG+AGG + chr8_4:52955246-52955265 Msa1332950:intron 35.0%
AACAGTGATTATCAGAGGAT+GGG + chr8_4:52955251-52955270 Msa1332950:intron 35.0%
!! GAGAGATTTTGATCAGATCA+TGG + chr8_4:52955325-52955344 Msa1332950:CDS 35.0%
!! AGATTTTGATCAGATCATGG+AGG + chr8_4:52955328-52955347 Msa1332950:CDS 35.0%
ATTGAACTTGATACTCGTGA+TGG + chr8_4:52955368-52955387 Msa1332950:CDS 35.0%
!!! TTTTTTAGGCAACTTCACTC+TGG + chr8_4:52955585-52955604 Msa1332950:intron 35.0%
GGATATATCATAATTCGCTC+TGG + chr8_4:52955725-52955744 Msa1332950:intron 35.0%
TCCAACTACTGATCAAAATG+AGG + chr8_4:52956005-52956024 Msa1332950:CDS 35.0%
!! TCCTCATTTTGATCAGTAGT+TGG - chr8_4:52956009-52956028 None:intergenic 35.0%
!!! AGGATTTTGATGATGAAGCT+GGG + chr8_4:52956132-52956151 Msa1332950:CDS 35.0%
TTCAAGGAACTCTTAGAGAA+TGG + chr8_4:52956171-52956190 Msa1332950:CDS 35.0%
TCAAGGAACTCTTAGAGAAT+GGG + chr8_4:52956172-52956191 Msa1332950:CDS 35.0%
TGAATTTCCTGGCTATGAAA+CGG - chr8_4:52956217-52956236 None:intergenic 35.0%
TTTCATAGCCAGGAAATTCA+AGG + chr8_4:52956217-52956236 Msa1332950:CDS 35.0%
AGTCTCCATGTTCATTCTTT+GGG - chr8_4:52956265-52956284 None:intergenic 35.0%
AAGTCTCCATGTTCATTCTT+TGG - chr8_4:52956266-52956285 None:intergenic 35.0%
TTTCGAATCTGGTCATAAAC+TGG - chr8_4:52956601-52956620 None:intergenic 35.0%
ATGACCAGATTCGAAATATC+AGG + chr8_4:52956605-52956624 Msa1332950:CDS 35.0%
GTTACCTGATATTTCGAATC+TGG - chr8_4:52956612-52956631 None:intergenic 35.0%
! TGGGAGTGTAATATATCAGT+TGG - chr8_4:52956644-52956663 None:intergenic 35.0%
TTTCATCCAGTGGAAGATAT+GGG - chr8_4:52956663-52956682 None:intergenic 35.0%
! TTTTCATCCAGTGGAAGATA+TGG - chr8_4:52956664-52956683 None:intergenic 35.0%
ATACTTAACCTGTTGCAACT+GGG - chr8_4:52956778-52956797 None:intergenic 35.0%
TCTTATTCAGAGGTGAAAGT+TGG + chr8_4:52956843-52956862 Msa1332950:CDS 35.0%
GTTCACTGTCAATATTGAAC+AGG + chr8_4:52956896-52956915 Msa1332950:CDS 35.0%
GTACTTCCTTTCAAATCCTT+GGG + chr8_4:52956918-52956937 Msa1332950:intron 35.0%
TGAAATCCCAAGGATTTGAA+AGG - chr8_4:52956927-52956946 None:intergenic 35.0%
!! AACTTTGGTTTGAAATCCCA+AGG - chr8_4:52956937-52956956 None:intergenic 35.0%
AGTATCACTTCCTTGTATCT+CGG - chr8_4:52957253-52957272 None:intergenic 35.0%
AAATCATTACAGAACACCCA+CGG - chr8_4:52957352-52957371 None:intergenic 35.0%
AAAAAAATTCAGGAGGTCAC+AGG + chr8_4:52957395-52957414 Msa1332950:intron 35.0%
GAAAACCATTCTTTGTGTTC+AGG - chr8_4:52957448-52957467 None:intergenic 35.0%
! GAACACAAAGAATGGTTTTC+CGG + chr8_4:52957448-52957467 Msa1332950:CDS 35.0%
! ATAATTAGCCTCAACAACAG+TGG - chr8_4:52957480-52957499 None:intergenic 35.0%
AACAAACCCTTTCTCCAATT+CGG - chr8_4:52957586-52957605 None:intergenic 35.0%
GGTCAAGAAAAGAATGTTGA+AGG + chr8_4:52957754-52957773 Msa1332950:CDS 35.0%
ATTTGACAAGATGAATGACC+AGG + chr8_4:52958104-52958123 Msa1332950:CDS 35.0%
AGCATAAGCATATCAAAAGC+TGG + chr8_4:52958251-52958270 Msa1332950:CDS 35.0%
TAGAAGATGAAGTCTTGGTT+TGG - chr8_4:52958375-52958394 None:intergenic 35.0%
TGACATAGAAGATGAAGTCT+TGG - chr8_4:52958380-52958399 None:intergenic 35.0%
GGTTTCTAATTGAACTCTGT+TGG + chr8_4:52958465-52958484 Msa1332950:intron 35.0%
CTGCCAGTAACATCAATTTA+AGG + chr8_4:52958816-52958835 Msa1332950:intron 35.0%
TACTTCTTCAACAGATCTTG+AGG - chr8_4:52958900-52958919 None:intergenic 35.0%
AATCAGCATCATGTAACCTT+GGG - chr8_4:52958950-52958969 None:intergenic 35.0%
AAATCAGCATCATGTAACCT+TGG - chr8_4:52958951-52958970 None:intergenic 35.0%
GGCACATTGAATCAATGATA+AGG + chr8_4:52959139-52959158 Msa1332950:CDS 35.0%
CATTTCTACCCAAAAGTTTG+GGG + chr8_4:52959251-52959270 Msa1332950:CDS 35.0%
!!! GTGATTTTGATTGGCATTCA+TGG + chr8_4:52959411-52959430 Msa1332950:intron 35.0%
ATGCTCATTTATATTCTCCG+TGG + chr8_4:52959526-52959545 Msa1332950:CDS 35.0%
TGCTCATTTATATTCTCCGT+GGG + chr8_4:52959527-52959546 Msa1332950:CDS 35.0%
AATATGCTGCTGTTGAAGAA+GGG - chr8_4:52959757-52959776 None:intergenic 35.0%
AAATATGCTGCTGTTGAAGA+AGG - chr8_4:52959758-52959777 None:intergenic 35.0%
! AATTGGTTGCTGTTGAACAA+GGG - chr8_4:52959862-52959881 None:intergenic 35.0%
! AAATTGGTTGCTGTTGAACA+AGG - chr8_4:52959863-52959882 None:intergenic 35.0%
TTTGTATTGGATGAAGAACG+AGG + chr8_4:52959895-52959914 Msa1332950:three_prime_UTR 35.0%
GAGCTAGAAGAGAAGAATCA+TGG + chr8_4:52954926-52954945 Msa1332950:exon 40.0%
GAACAGTGATTATCAGAGGA+TGG + chr8_4:52955250-52955269 Msa1332950:intron 40.0%
ATACGGATGATGACAGTTAC+AGG + chr8_4:52955872-52955891 Msa1332950:CDS 40.0%
AAGGTCACAAAGACACTCAA+GGG + chr8_4:52955975-52955994 Msa1332950:CDS 40.0%
TTTACGGGGTCATTGAATGT+AGG + chr8_4:52956109-52956128 Msa1332950:intron 40.0%
!!! GAGGATTTTGATGATGAAGC+TGG + chr8_4:52956131-52956150 Msa1332950:CDS 40.0%
TATGAGATGTACCGTGTTCA+AGG + chr8_4:52956155-52956174 Msa1332950:CDS 40.0%
! CTCTAAGAGTTCCTTGAACA+CGG - chr8_4:52956169-52956188 None:intergenic 40.0%
GTCAACCCAAAGAATGAACA+TGG + chr8_4:52956257-52956276 Msa1332950:CDS 40.0%
TGTGCGTCTGATAAGTGAAA+TGG + chr8_4:52956292-52956311 Msa1332950:CDS 40.0%
CTGATAAGTGAAATGGTGTC+AGG + chr8_4:52956299-52956318 Msa1332950:CDS 40.0%
TGTAGCTAACAAGTGCAGTT+TGG + chr8_4:52956402-52956421 Msa1332950:intron 40.0%
CTGGTCATAAACTGGTAAGT+TGG - chr8_4:52956593-52956612 None:intergenic 40.0%
ATAGTTGCCTTATATCGAGC+AGG + chr8_4:52956688-52956707 Msa1332950:intron 40.0%
TACTTAACCTGTTGCAACTG+GGG - chr8_4:52956777-52956796 None:intergenic 40.0%
CATACTTAACCTGTTGCAAC+TGG - chr8_4:52956779-52956798 None:intergenic 40.0%
CAACAGGTTAAGTATGACTG+TGG + chr8_4:52956783-52956802 Msa1332950:CDS 40.0%
AAGTATGACTGTGGCAAATG+TGG + chr8_4:52956792-52956811 Msa1332950:CDS 40.0%
AGTATGACTGTGGCAAATGT+GGG + chr8_4:52956793-52956812 Msa1332950:CDS 40.0%
!! TTTTGATTGACACTCAGGAC+AGG - chr8_4:52956871-52956890 None:intergenic 40.0%
TGTCCTGAGTGTCAATCAAA+AGG + chr8_4:52956870-52956889 Msa1332950:CDS 40.0%
GGTACTTCCTTTCAAATCCT+TGG + chr8_4:52956917-52956936 Msa1332950:intron 40.0%
GATCTTACAATCTCTTCTCC+AGG - chr8_4:52957304-52957323 None:intergenic 40.0%
!! TGACTTGTTTATATTGGCCG+TGG + chr8_4:52957332-52957351 Msa1332950:intron 40.0%
! GACTTGTTTATATTGGCCGT+GGG + chr8_4:52957333-52957352 Msa1332950:intron 40.0%
TTGTCCCTGAACACAAAGAA+TGG + chr8_4:52957440-52957459 Msa1332950:CDS 40.0%
TCAACAACAGTGGAAAACAC+CGG - chr8_4:52957470-52957489 None:intergenic 40.0%
TAAGTTTGTAGGCAGAGAAG+AGG - chr8_4:52957520-52957539 None:intergenic 40.0%
GTCTTCCTGTGTAAGTTTGT+AGG - chr8_4:52957531-52957550 None:intergenic 40.0%
ACTTACACAGGAAGACAAAG+AGG + chr8_4:52957535-52957554 Msa1332950:CDS 40.0%
ACAAACCCTTTCTCCAATTC+GGG - chr8_4:52957585-52957604 None:intergenic 40.0%
TCCATTGCTCCATCAATCTA+TGG + chr8_4:52957688-52957707 Msa1332950:CDS 40.0%
ACCATAGATTGATGGAGCAA+TGG - chr8_4:52957692-52957711 None:intergenic 40.0%
TCATCGTGACCATAGATTGA+TGG - chr8_4:52957700-52957719 None:intergenic 40.0%
! GCAATAGCCTTAGCTATGTT+TGG + chr8_4:52957730-52957749 Msa1332950:CDS 40.0%
! ATAGCCTTAGCTATGTTTGG+AGG + chr8_4:52957733-52957752 Msa1332950:CDS 40.0%
TTGACCTCCAAACATAGCTA+AGG - chr8_4:52957740-52957759 None:intergenic 40.0%
!! AATTGAGACTTTGCTGTTCC+TGG - chr8_4:52957826-52957845 None:intergenic 40.0%
ACAAGATGAATGACCAGGAT+CGG + chr8_4:52958109-52958128 Msa1332950:CDS 40.0%
! ATCTATTTTCCTACCGATCC+TGG - chr8_4:52958125-52958144 None:intergenic 40.0%
TGGAATTGTCACATCTCTTC+AGG + chr8_4:52958271-52958290 Msa1332950:CDS 40.0%
TCACTTCAAGTCACAACCTA+AGG + chr8_4:52958710-52958729 Msa1332950:CDS 40.0%
CACTTCAAGTCACAACCTAA+GGG + chr8_4:52958711-52958730 Msa1332950:CDS 40.0%
CCTTGGGAAAACATTCAACT+TGG - chr8_4:52958934-52958953 None:intergenic 40.0%
!! CCAAGTTGAATGTTTTCCCA+AGG + chr8_4:52958931-52958950 Msa1332950:CDS 40.0%
! TTTCTGCACCCCAAACTTTT+GGG - chr8_4:52959262-52959281 None:intergenic 40.0%
!! AGAAAGCACTGCAAAAGGTA+TGG + chr8_4:52959277-52959296 Msa1332950:intron 40.0%
GGCATTCATGGAATTTGTAC+TGG + chr8_4:52959423-52959442 Msa1332950:intron 40.0%
CGTAACCAATGCTTTGCATT+TGG + chr8_4:52959552-52959571 Msa1332950:CDS 40.0%
GTCTTCCAAATGCAAAGCAT+TGG - chr8_4:52959560-52959579 None:intergenic 40.0%
CATTTGGAAGACATTCTCAC+TGG + chr8_4:52959568-52959587 Msa1332950:CDS 40.0%
AGTAGATGATCTCTCCTTCA+AGG + chr8_4:52959624-52959643 Msa1332950:CDS 40.0%
! ATTGGTTGCTGTTGAACAAG+GGG - chr8_4:52959861-52959880 None:intergenic 40.0%
ACAGAACAGTCAAGAAAGAG+TGG + chr8_4:52960183-52960202 Msa1332950:three_prime_UTR 40.0%
CATTGCATCTATGAGCGTTA+AGG - chr8_4:52960272-52960291 None:intergenic 40.0%
!! TTGATCGGTGTTAAAACCGG+CGG - chr8_4:52954997-52955016 None:intergenic 45.0%
! GTGAGTGTGAGGAAGTTGAT+CGG - chr8_4:52955012-52955031 None:intergenic 45.0%
ATCTTCCTCTTCCTCTGGAT+CGG - chr8_4:52955096-52955115 None:intergenic 45.0%
TGAAGCCGATCAGTTCGAAT+CGG + chr8_4:52955274-52955293 Msa1332950:CDS 45.0%
!! ATCGGTTGGGTTGGATGATT+CGG + chr8_4:52955292-52955311 Msa1332950:CDS 45.0%
! CTGAGGAAGTTTAGAGCGAT+TGG - chr8_4:52955402-52955421 None:intergenic 45.0%
GAAATGGTTTACCTCCGTCA+TGG - chr8_4:52955430-52955449 None:intergenic 45.0%
ACAGTTACAGGCCCTCTAAA+AGG + chr8_4:52955884-52955903 Msa1332950:CDS 45.0%
! CAGTTACAGGCCCTCTAAAA+GGG + chr8_4:52955885-52955904 Msa1332950:CDS 45.0%
GATGGGATGAATAGTTCACC+TGG + chr8_4:52955952-52955971 Msa1332950:CDS 45.0%
GGATGAATAGTTCACCTGGA+AGG + chr8_4:52955956-52955975 Msa1332950:CDS 45.0%
GAAGGTCACAAAGACACTCA+AGG + chr8_4:52955974-52955993 Msa1332950:CDS 45.0%
TCCATCCCAACATTGCCATT+TGG + chr8_4:52956452-52956471 Msa1332950:CDS 45.0%
GCTAGCCAAATGGCAATGTT+GGG - chr8_4:52956460-52956479 None:intergenic 45.0%
AGCTAGCCAAATGGCAATGT+TGG - chr8_4:52956461-52956480 None:intergenic 45.0%
TACACTCCCATATCTTCCAC+TGG + chr8_4:52956654-52956673 Msa1332950:intron 45.0%
ACTTAACCTGTTGCAACTGG+GGG - chr8_4:52956776-52956795 None:intergenic 45.0%
GTATGACTGTGGCAAATGTG+GGG + chr8_4:52956794-52956813 Msa1332950:CDS 45.0%
!! GGTCCTTTTGATTGACACTC+AGG - chr8_4:52956876-52956895 None:intergenic 45.0%
! GGTGTTTTCCACTGTTGTTG+AGG + chr8_4:52957469-52957488 Msa1332950:CDS 45.0%
CTCTGCCTACAAACTTACAC+AGG + chr8_4:52957523-52957542 Msa1332950:CDS 45.0%
AAACCCTTTCTCCAATTCGG+GGG - chr8_4:52957583-52957602 None:intergenic 45.0%
CAAACCCTTTCTCCAATTCG+GGG - chr8_4:52957584-52957603 None:intergenic 45.0%
CTGTATACACCACTGGCAAA+GGG + chr8_4:52957968-52957987 Msa1332950:CDS 45.0%
TGTATACACCACTGGCAAAG+GGG + chr8_4:52957969-52957988 Msa1332950:CDS 45.0%
TCCACAAAGATCCAGTCACA+AGG + chr8_4:52958019-52958038 Msa1332950:CDS 45.0%
CCACAAAGATCCAGTCACAA+GGG + chr8_4:52958020-52958039 Msa1332950:CDS 45.0%
AAGATCCAGTCACAAGGGAA+TGG + chr8_4:52958025-52958044 Msa1332950:CDS 45.0%
TCCTCTGTCAGCTAGAACAA+GGG - chr8_4:52958067-52958086 None:intergenic 45.0%
TTCCTCTGTCAGCTAGAACA+AGG - chr8_4:52958068-52958087 None:intergenic 45.0%
GGTAAGTATCCATGAAGCCA+TGG + chr8_4:52958220-52958239 Msa1332950:CDS 45.0%
ATTGCTGCTGCCAATCCAAT+TGG + chr8_4:52958308-52958327 Msa1332950:CDS 45.0%
TTACCTCCCTCCAATTGGAT+TGG - chr8_4:52958321-52958340 None:intergenic 45.0%
TTTGCTTACCTCCCTCCAAT+TGG - chr8_4:52958326-52958345 None:intergenic 45.0%
GGGAGGTAAGCAAATATGCA+AGG + chr8_4:52958332-52958351 Msa1332950:intron 45.0%
ACATTACCTTCACAACGCAG+AGG - chr8_4:52958568-52958587 None:intergenic 45.0%
GCAAGCATTTCATCAGTGAC+TGG - chr8_4:52958672-52958691 None:intergenic 45.0%
TTCAAGTCACAACCTAAGGG+TGG + chr8_4:52958714-52958733 Msa1332950:CDS 45.0%
GAGTCATTGTTACCACCCTT+AGG - chr8_4:52958729-52958748 None:intergenic 45.0%
GGAATTTAGTGAGGACCTCT+GGG - chr8_4:52958791-52958810 None:intergenic 45.0%
AGGAATTTAGTGAGGACCTC+TGG - chr8_4:52958792-52958811 None:intergenic 45.0%
CACATGTATACGCAGAACTG+CGG + chr8_4:52958982-52959001 Msa1332950:CDS 45.0%
! TCTCTTGTTTAGCACGGACA+AGG + chr8_4:52959099-52959118 Msa1332950:intron 45.0%
TCAATGTGCCTTACAGCGAT+GGG - chr8_4:52959129-52959148 None:intergenic 45.0%
TTCAATGTGCCTTACAGCGA+TGG - chr8_4:52959130-52959149 None:intergenic 45.0%
CAGACAGCATGTCATACAAG+AGG + chr8_4:52959191-52959210 Msa1332950:CDS 45.0%
GCATGTCATACAAGAGGATG+TGG + chr8_4:52959197-52959216 Msa1332950:CDS 45.0%
CATACAAGAGGATGTGGACA+TGG + chr8_4:52959203-52959222 Msa1332950:CDS 45.0%
! CTTTCTGCACCCCAAACTTT+TGG - chr8_4:52959263-52959282 None:intergenic 45.0%
!!! GTCGTTTTGTTTGACACTGC+AGG + chr8_4:52959702-52959721 Msa1332950:intron 45.0%
GAGTGATCAGACATAACCCT+AGG + chr8_4:52959917-52959936 Msa1332950:three_prime_UTR 45.0%
ATGCACTCTACGTTCACCTA+GGG - chr8_4:52959936-52959955 None:intergenic 45.0%
GTGAACGTAGAGTGCATCTA+TGG + chr8_4:52959939-52959958 Msa1332950:three_prime_UTR 45.0%
AACCTAATAGCCACTGGGTT+TGG + chr8_4:52960050-52960069 Msa1332950:three_prime_UTR 45.0%
ACCTAATAGCCACTGGGTTT+GGG + chr8_4:52960051-52960070 Msa1332950:three_prime_UTR 45.0%
AGTAGCCTGTGAGTATGTGA+TGG + chr8_4:52960298-52960317 Msa1332950:three_prime_UTR 45.0%
GTAGCCTGTGAGTATGTGAT+GGG + chr8_4:52960299-52960318 Msa1332950:three_prime_UTR 45.0%
AGAACCCATCACATACTCAC+AGG - chr8_4:52960306-52960325 None:intergenic 45.0%
!!! GGGGTTGATGCAGGATTTTC+AGG - chr8_4:52954954-52954973 None:intergenic 50.0%
AAGGTGAGGTAGGTGAATCG+GGG - chr8_4:52954974-52954993 None:intergenic 50.0%
GAAGGTGAGGTAGGTGAATC+GGG - chr8_4:52954975-52954994 None:intergenic 50.0%
GGAAGGTGAGGTAGGTGAAT+CGG - chr8_4:52954976-52954995 None:intergenic 50.0%
CTTCATCGTCTTCAGATGCG+CGG - chr8_4:52955040-52955059 None:intergenic 50.0%
GCGGATGATATCGGGATCAA+CGG - chr8_4:52955066-52955085 None:intergenic 50.0%
TCTTCCTCTTCCTCTGGATC+GGG - chr8_4:52955095-52955114 None:intergenic 50.0%
GATCCAGAGGAAGAGGAAGA+TGG + chr8_4:52955095-52955114 Msa1332950:CDS 50.0%
TCTCCATCTTCCTCTTCCTC+TGG - chr8_4:52955101-52955120 None:intergenic 50.0%
!! CCCAACCGATTCGAACTGAT+CGG - chr8_4:52955282-52955301 None:intergenic 50.0%
CCGATCAGTTCGAATCGGTT+GGG + chr8_4:52955279-52955298 Msa1332950:CDS 50.0%
TCAGTTCGAATCGGTTGGGT+TGG + chr8_4:52955283-52955302 Msa1332950:CDS 50.0%
!! TGGGTTGGATGATTCGGTTG+AGG + chr8_4:52955298-52955317 Msa1332950:CDS 50.0%
! GTTTAGAGCGATTGGAAGCG+CGG - chr8_4:52955394-52955413 None:intergenic 50.0%
CTTCCTCAGCTTCTCCATGA+CGG + chr8_4:52955413-52955432 Msa1332950:CDS 50.0%
!! TCAGCTCTGGCCCTTTTAGA+GGG - chr8_4:52955898-52955917 None:intergenic 50.0%
!! ATCAGCTCTGGCCCTTTTAG+AGG - chr8_4:52955899-52955918 None:intergenic 50.0%
AGAAGACCTGTGATCAGCTC+TGG - chr8_4:52955911-52955930 None:intergenic 50.0%
CCATCAAGATCATCGTCGCT+CGG - chr8_4:52955937-52955956 None:intergenic 50.0%
CGAGCGACGATGATCTTGAT+GGG + chr8_4:52955935-52955954 Msa1332950:CDS 50.0%
GAGTGTCTTTGTGACCTTCC+AGG - chr8_4:52955973-52955992 None:intergenic 50.0%
GTCACAAAGACACTCAAGGG+AGG + chr8_4:52955978-52955997 Msa1332950:CDS 50.0%
ACGGGGTCATTGAATGTAGG+AGG + chr8_4:52956112-52956131 Msa1332950:intron 50.0%
GCCAAATGGCAATGTTGGGA+TGG - chr8_4:52956456-52956475 None:intergenic 50.0%
AGGTGCATCAGCTAGCCAAA+TGG - chr8_4:52956470-52956489 None:intergenic 50.0%
GGATCTGCCTGCTCGATATA+AGG - chr8_4:52956698-52956717 None:intergenic 50.0%
GAATTGGGGGAGTTGTAACC+AGG + chr8_4:52956736-52956755 Msa1332950:CDS 50.0%
! AGTTTTCCCCCAGTTGCAAC+AGG + chr8_4:52956767-52956786 Msa1332950:CDS 50.0%
! TGGCAAATGTGGGGCAGTTT+TGG + chr8_4:52956803-52956822 Msa1332950:CDS 50.0%
! GGCAAATGTGGGGCAGTTTT+GGG + chr8_4:52956804-52956823 Msa1332950:CDS 50.0%
GTCCTGCAGGAACTATTCCA+GGG - chr8_4:52957225-52957244 None:intergenic 50.0%
AAGACCCCCGAATTGGAGAA+AGG + chr8_4:52957576-52957595 Msa1332950:CDS 50.0%
AGACCCCCGAATTGGAGAAA+GGG + chr8_4:52957577-52957596 Msa1332950:CDS 50.0%
! GAAGGGAAGCATAGACTACG+AGG + chr8_4:52957772-52957791 Msa1332950:CDS 50.0%
GTTCTTCTTCTCGGTGATCC+AGG + chr8_4:52957805-52957824 Msa1332950:CDS 50.0%
CAGAGAGCTGTATACACCAC+TGG + chr8_4:52957961-52957980 Msa1332950:CDS 50.0%
GCTGTATACACCACTGGCAA+AGG + chr8_4:52957967-52957986 Msa1332950:CDS 50.0%
CCCTTGTGACTGGATCTTTG+TGG - chr8_4:52958023-52958042 None:intergenic 50.0%
ACAAGGGAATGGACCCTTGA+GGG + chr8_4:52958036-52958055 Msa1332950:CDS 50.0%
GATGAATGACCAGGATCGGT+AGG + chr8_4:52958113-52958132 Msa1332950:intron 50.0%
CTGCTGCCAATCCAATTGGA+GGG + chr8_4:52958312-52958331 Msa1332950:CDS 50.0%
CGATATCCTCTGCGTTGTGA+AGG + chr8_4:52958559-52958578 Msa1332950:CDS 50.0%
TGGCATGCCAGATGCATCTT+GGG - chr8_4:52958763-52958782 None:intergenic 50.0%
TTGGCATGCCAGATGCATCT+TGG - chr8_4:52958764-52958783 None:intergenic 50.0%
GCAGCAGCAGGAATTTAGTG+AGG - chr8_4:52958800-52958819 None:intergenic 50.0%
TTGATGTTACTGGCAGCAGC+AGG - chr8_4:52958812-52958831 None:intergenic 50.0%
TGTATACGCAGAACTGCGGA+AGG + chr8_4:52958986-52959005 Msa1332950:CDS 50.0%
CAATGTGCCTTACAGCGATG+GGG - chr8_4:52959128-52959147 None:intergenic 50.0%
! TCTGAGATGCATTCGCGCAT+GGG - chr8_4:52959175-52959194 None:intergenic 50.0%
!! GGTGCAGAAAGCACTGCAAA+AGG + chr8_4:52959272-52959291 Msa1332950:CDS 50.0%
!! AAGCATTGGTTACGAGCCCA+CGG - chr8_4:52959546-52959565 None:intergenic 50.0%
GATGCACTCTACGTTCACCT+AGG - chr8_4:52959937-52959956 None:intergenic 50.0%
CCTAATAGCCACTGGGTTTG+GGG + chr8_4:52960052-52960071 Msa1332950:three_prime_UTR 50.0%
ATCCACAATCCAACAGGCAC+CGG - chr8_4:52960090-52960109 None:intergenic 50.0%
CAGACGATCCACAATCCAAC+AGG - chr8_4:52960096-52960115 None:intergenic 50.0%
AGGTGAGGTAGGTGAATCGG+GGG - chr8_4:52954973-52954992 None:intergenic 55.0%
GTTAAAACCGGCGGAAGGTG+AGG - chr8_4:52954988-52955007 None:intergenic 55.0%
!! TCGGTGTTAAAACCGGCGGA+AGG - chr8_4:52954993-52955012 None:intergenic 55.0%
GGTTCGTCGCGGATGATATC+GGG - chr8_4:52955074-52955093 None:intergenic 55.0%
GGGTTCGTCGCGGATGATAT+CGG - chr8_4:52955075-52955094 None:intergenic 55.0%
GCCGATCAGTTCGAATCGGT+TGG + chr8_4:52955278-52955297 Msa1332950:CDS 55.0%
AAAGGGCCAGAGCTGATCAC+AGG + chr8_4:52955902-52955921 Msa1332950:CDS 55.0%
CCGAGCGACGATGATCTTGA+TGG + chr8_4:52955934-52955953 Msa1332950:CDS 55.0%
AAGTGCGCCGTTTCATAGCC+AGG + chr8_4:52956207-52956226 Msa1332950:CDS 55.0%
CTCACTCTTCAAGAGAGCCC+TGG + chr8_4:52957205-52957224 Msa1332950:CDS 55.0%
AGCCCTGGAATAGTTCCTGC+AGG + chr8_4:52957220-52957239 Msa1332950:CDS 55.0%
CGTCCTGCAGGAACTATTCC+AGG - chr8_4:52957226-52957245 None:intergenic 55.0%
AGGACGACTGCCGAGATACA+AGG + chr8_4:52957240-52957259 Msa1332950:CDS 55.0%
CTGATTGACTGTGCTCGACC+TGG + chr8_4:52957283-52957302 Msa1332950:CDS 55.0%
TTGGGCAAAGACCCCCGAAT+TGG + chr8_4:52957569-52957588 Msa1332950:CDS 55.0%
AGGGTCCATTCCCTTGTGAC+TGG - chr8_4:52958033-52958052 None:intergenic 55.0%
CACAAGGGAATGGACCCTTG+AGG + chr8_4:52958035-52958054 Msa1332950:CDS 55.0%
CAAGGGAATGGACCCTTGAG+GGG + chr8_4:52958037-52958056 Msa1332950:CDS 55.0%
AAGGGAATGGACCCTTGAGG+GGG + chr8_4:52958038-52958057 Msa1332950:CDS 55.0%
! GCCCTTGTTCTAGCTGACAG+AGG + chr8_4:52958063-52958082 Msa1332950:CDS 55.0%
TCTGCTGCTCCATGGCTTCA+TGG - chr8_4:52958232-52958251 None:intergenic 55.0%
GCTTATGCTCTGCTGCTCCA+TGG - chr8_4:52958240-52958259 None:intergenic 55.0%
GCTGCTGCCAATCCAATTGG+AGG + chr8_4:52958311-52958330 Msa1332950:CDS 55.0%
CTGCCAATCCAATTGGAGGG+AGG + chr8_4:52958315-52958334 Msa1332950:CDS 55.0%
AGCGAGTCCCAAGATGCATC+TGG + chr8_4:52958753-52958772 Msa1332950:CDS 55.0%
AAGGAGTCCCCATCGCTGTA+AGG + chr8_4:52959118-52959137 Msa1332950:CDS 55.0%
! GTCTGAGATGCATTCGCGCA+TGG - chr8_4:52959176-52959195 None:intergenic 55.0%
CCCCAAACCCAGTGGCTATT+AGG - chr8_4:52960055-52960074 None:intergenic 55.0%
TCCACAATCCAACAGGCACC+GGG - chr8_4:52960089-52960108 None:intergenic 55.0%
!! GGTGAATCGGGGGTTGATGC+AGG - chr8_4:52954963-52954982 None:intergenic 60.0%
TCACCTACCTCACCTTCCGC+CGG + chr8_4:52954978-52954997 Msa1332950:CDS 60.0%
AAACCGGCGGAAGGTGAGGT+AGG - chr8_4:52954984-52955003 None:intergenic 60.0%
ATCGTCTTCAGATGCGCGGC+TGG - chr8_4:52955036-52955055 None:intergenic 60.0%
CGAACCCGATCCAGAGGAAG+AGG + chr8_4:52955088-52955107 Msa1332950:CDS 60.0%
CCTCCGTCATGGAGAAGCTG+AGG - chr8_4:52955419-52955438 None:intergenic 60.0%
CCTCAGCTTCTCCATGACGG+AGG + chr8_4:52955416-52955435 Msa1332950:CDS 60.0%
GGAGTTGTAACCAGGCGCTC+TGG + chr8_4:52956744-52956763 Msa1332950:CDS 60.0%
TATCTCGGCAGTCGTCCTGC+AGG - chr8_4:52957238-52957257 None:intergenic 60.0%
AGCAGATGCCCCTTTGCCAG+TGG - chr8_4:52957980-52957999 None:intergenic 60.0%
!! TGGCAAAGGGGCATCTGCTG+TGG + chr8_4:52957981-52958000 Msa1332950:CDS 60.0%
!! GGCAAAGGGGCATCTGCTGT+GGG + chr8_4:52957982-52958001 Msa1332950:CDS 60.0%
AGGGAATGGACCCTTGAGGG+GGG + chr8_4:52958039-52958058 Msa1332950:CDS 60.0%
AACAAGGGCTCCCCCCTCAA+GGG - chr8_4:52958052-52958071 None:intergenic 60.0%
TGGCATGCCAACTGACCCAG+AGG + chr8_4:52958773-52958792 Msa1332950:CDS 60.0%
GTGAGGACCTCTGGGTCAGT+TGG - chr8_4:52958783-52958802 None:intergenic 60.0%
CATACTGGCCCCAAACCCAG+TGG - chr8_4:52960063-52960082 None:intergenic 60.0%
! CACTGGGTTTGGGGCCAGTA+TGG + chr8_4:52960061-52960080 Msa1332950:three_prime_UTR 60.0%
! TTTGGGGCCAGTATGGTGCC+CGG + chr8_4:52960068-52960087 Msa1332950:three_prime_UTR 60.0%
CCTCTGGATCGGGTTCGTCG+CGG - chr8_4:52955085-52955104 None:intergenic 65.0%
! GGGGAAAACTCCAGAGCGCC+TGG - chr8_4:52956757-52956776 None:intergenic 65.0%
GAACAAGGGCTCCCCCCTCA+AGG - chr8_4:52958053-52958072 None:intergenic 65.0%
!! ACAGGCACCGGGCACCATAC+TGG - chr8_4:52960078-52960097 None:intergenic 65.0%
GTATGGTGCCCGGTGCCTGT+TGG + chr8_4:52960078-52960097 Msa1332950:three_prime_UTR 65.0%
GCCCGGTGCCTGTTGGATTG+TGG + chr8_4:52960085-52960104 Msa1332950:three_prime_UTR 65.0%
GCGCGGCTGGTGTGAGTGTG+AGG - chr8_4:52955023-52955042 None:intergenic 70.0%
CCGCGACGAACCCGATCCAG+AGG + chr8_4:52955082-52955101 Msa1332950:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52954880 52960332 52954880 ID=Msa1332950;Name=Msa1332950
chr8_4 mRNA 52954880 52960332 52954880 ID=Msa1332950-mRNA-1;Parent=Msa1332950;Name=Msa1332950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=65|1|1|1|0.94|0.88|18|472|929
chr8_4 exon 52954880 52955147 52954880 ID=Msa1332950-mRNA-1:exon:16035;Parent=Msa1332950-mRNA-1
chr8_4 exon 52955256 52955437 52955256 ID=Msa1332950-mRNA-1:exon:16036;Parent=Msa1332950-mRNA-1
chr8_4 exon 52955872 52956041 52955872 ID=Msa1332950-mRNA-1:exon:16037;Parent=Msa1332950-mRNA-1
chr8_4 exon 52956131 52956320 52956131 ID=Msa1332950-mRNA-1:exon:16038;Parent=Msa1332950-mRNA-1
chr8_4 exon 52956407 52956626 52956407 ID=Msa1332950-mRNA-1:exon:16039;Parent=Msa1332950-mRNA-1
chr8_4 exon 52956710 52956917 52956710 ID=Msa1332950-mRNA-1:exon:16040;Parent=Msa1332950-mRNA-1
chr8_4 exon 52957181 52957315 52957181 ID=Msa1332950-mRNA-1:exon:16041;Parent=Msa1332950-mRNA-1
chr8_4 exon 52957407 52957598 52957407 ID=Msa1332950-mRNA-1:exon:16042;Parent=Msa1332950-mRNA-1
chr8_4 exon 52957679 52957851 52957679 ID=Msa1332950-mRNA-1:exon:16043;Parent=Msa1332950-mRNA-1
chr8_4 exon 52957942 52958130 52957942 ID=Msa1332950-mRNA-1:exon:16044;Parent=Msa1332950-mRNA-1
chr8_4 exon 52958220 52958336 52958220 ID=Msa1332950-mRNA-1:exon:16045;Parent=Msa1332950-mRNA-1
chr8_4 exon 52958496 52958580 52958496 ID=Msa1332950-mRNA-1:exon:16046;Parent=Msa1332950-mRNA-1
chr8_4 exon 52958657 52958794 52958657 ID=Msa1332950-mRNA-1:exon:16047;Parent=Msa1332950-mRNA-1
chr8_4 exon 52958891 52959016 52958891 ID=Msa1332950-mRNA-1:exon:16048;Parent=Msa1332950-mRNA-1
chr8_4 exon 52959111 52959293 52959111 ID=Msa1332950-mRNA-1:exon:16049;Parent=Msa1332950-mRNA-1
chr8_4 exon 52959484 52959645 52959484 ID=Msa1332950-mRNA-1:exon:16050;Parent=Msa1332950-mRNA-1
chr8_4 exon 52959724 52960238 52959724 ID=Msa1332950-mRNA-1:exon:16051;Parent=Msa1332950-mRNA-1
chr8_4 exon 52960259 52960332 52960259 ID=Msa1332950-mRNA-1:exon:16052;Parent=Msa1332950-mRNA-1
chr8_4 five_prime_UTR 52954880 52954944 52954880 ID=Msa1332950-mRNA-1:five_prime_utr;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52954945 52955147 52954945 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52955256 52955437 52955256 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52955872 52956041 52955872 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52956131 52956320 52956131 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52956407 52956626 52956407 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52956710 52956917 52956710 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52957181 52957315 52957181 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52957407 52957598 52957407 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52957679 52957851 52957679 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52957942 52958130 52957942 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52958220 52958336 52958220 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52958496 52958580 52958496 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52958657 52958794 52958657 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52958891 52959016 52958891 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52959111 52959293 52959111 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52959484 52959645 52959484 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 CDS 52959724 52959840 52959724 ID=Msa1332950-mRNA-1:cds;Parent=Msa1332950-mRNA-1
chr8_4 three_prime_UTR 52959841 52960238 52959841 ID=Msa1332950-mRNA-1:three_prime_utr;Parent=Msa1332950-mRNA-1
chr8_4 three_prime_UTR 52960259 52960332 52960259 ID=Msa1332950-mRNA-1:three_prime_utr;Parent=Msa1332950-mRNA-1
Gene Sequence

>Msa1332950

ATGGATCCTGAAAATCCTGCATCAACCCCCGATTCACCTACCTCACCTTCCGCCGGTTTTAACACCGATCAACTTCCTCACACTCACACCAGCCGCGCATCTGAAGACGATGAAGCTTCCGTTGATCCCGATATCATCCGCGACGAACCCGATCCAGAGGAAGAGGAAGATGGAGAAGATCTCTACAATGATAACTTTCTCGATGATTATCAGAGGATGGGTGAAGCCGATCAGTTCGAATCGGTTGGGTTGGATGATTCGGTTGAGGATGAGAGAGATTTTGATCAGATCATGGAGGATCGTAGAGCTGCTGAGATTGAACTTGATACTCGTGATGGCCGCGCTTCCAATCGCTCTAAACTTCCTCAGCTTCTCCATGACGGAGATACGGATGATGACAGTTACAGGCCCTCTAAAAGGGCCAGAGCTGATCACAGGTCTTCTGCACCGAGCGACGATGATCTTGATGGGATGAATAGTTCACCTGGAAGGTCACAAAGACACTCAAGGGAGGATAATCCAACTACTGATCAAAATGAGGATGATCAATATGAGGAGGATTTTGATGATGAAGCTGGGTATGAGATGTACCGTGTTCAAGGAACTCTTAGAGAATGGGTTACAAGAGATGAAGTGCGCCGTTTCATAGCCAGGAAATTCAAGGATTTCTTACTCTCTTACGTCAACCCAAAGAATGAACATGGAGACTTTGAATATGTGCGTCTGATAAGTGAAATGGTGTCAGCTAACAAGTGCAGTTTGGAGATAGATTACAAGCAGTTTATCTATGTCCATCCCAACATTGCCATTTGGCTAGCTGATGCACCTCATTCTGTTTTAGAAGTAATGGAAGATGTTGCTAAAAGTGTTGTCTTTAACTTGCATGCAAATTACAAACATATACATCAAAAGATATATGTTCGCATTACCAACTTACCAGTTTATGACCAGATTCGAAATATCAGGCAGATCCATTTGAATACAATGATTCGAATTGGGGGAGTTGTAACCAGGCGCTCTGGAGTTTTCCCCCAGTTGCAACAGGTTAAGTATGACTGTGGCAAATGTGGGGCAGTTTTGGGACCATTTTTTCAGAATTCTTATTCAGAGGTGAAAGTTGGTTCCTGTCCTGAGTGTCAATCAAAAGGACCGTTCACTGTCAATATTGAACAGACAATTTACAGGAATTTTCAAAAGCTCACTCTTCAAGAGAGCCCTGGAATAGTTCCTGCAGGACGACTGCCGAGATACAAGGAAGTGATACTATTGAATGATCTGATTGACTGTGCTCGACCTGGAGAAGAGATTGAGGTCACAGGTGTTTATACTAATAACTTCGACTTGTCCCTGAACACAAAGAATGGTTTTCCGGTGTTTTCCACTGTTGTTGAGGCTAATTATGTTACAAAGAAGCAAGACCTCTTCTCTGCCTACAAACTTACACAGGAAGACAAAGAGGAGATTGAAAATTTGGGCAAAGACCCCCGAATTGGAGAAAGGATTATCAAGTCCATTGCTCCATCAATCTATGGTCACGATGATATAAAAACTGCAATAGCCTTAGCTATGTTTGGAGGTCAAGAAAAGAATGTTGAAGGGAAGCATAGACTACGAGGAGACATAAATGTTCTTCTTCTCGGTGATCCAGGAACAGCAAAGTCTCAATTTCTTAAATATGTTGAAAAAACTGGACAGAGAGCTGTATACACCACTGGCAAAGGGGCATCTGCTGTGGGTCTCACAGCTGCAGTCCACAAAGATCCAGTCACAAGGGAATGGACCCTTGAGGGGGGAGCCCTTGTTCTAGCTGACAGAGGAATTTGTCTCATTGATGAATTTGACAAGATGAATGACCAGGATCGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGCATAAGCATATCAAAAGCTGGAATTGTCACATCTCTTCAGGCACGCTGTTCTGTCATTGCTGCTGCCAATCCAATTGGAGGGAGATATGATTCATCAAAATTGTTTACTCAAAACGTTGAATTGACAGATCCTATTATTTCTCGTTTCGATATCCTCTGCGTTGTGAAGGATGTAGTTGATCCAGTCACTGATGAAATGCTTGCAAAGTTTGTTGTTGACAGTCACTTCAAGTCACAACCTAAGGGTGGTAACAATGACTCTGTGAGCGAGTCCCAAGATGCATCTGGCATGCCAACTGACCCAGAGATACTTCCTCAAGATCTGTTGAAGAAGTACGTTACATATGCCAAGTTGAATGTTTTCCCAAGGTTACATGATGCTGATTTGAATAAACTTTCACATGTATACGCAGAACTGCGGAAGGAATCATCACACGGACAAGGAGTCCCCATCGCTGTAAGGCACATTGAATCAATGATAAGGATGTCTGAAGCCCATGCGCGAATGCATCTCAGACAGCATGTCATACAAGAGGATGTGGACATGGCAATTCGTGTACTACTTGACTCATTCATTTCTACCCAAAAGTTTGGGGTGCAGAAAGCACTGCAAAAGAGCTTTAGAAAGTATATGACTTTCAAGAAAGACTATAATGATATGCTCATTTATATTCTCCGTGGGCTCGTAACCAATGCTTTGCATTTGGAAGACATTCTCACTGGATCTACATCAAGTCTAACCCATGTAGATATCAAAGTAGATGATCTCTCCTTCAAGGCTCAAGAGCATGAAATATATGATCTGACACCCTTCTTCAACAGCAGCATATTTTCAAATGCCAATTTTGAATTGGATAAAGAACGAGGAGTTATCAGACATTATCTCACTAGGTGA
Protein sequence

>Msa1332950

MDPENPASTPDSPTSPSAGFNTDQLPHTHTSRASEDDEASVDPDIIRDEPDPEEEEDGEDLYNDNFLDDYQRMGEADQFESVGLDDSVEDERDFDQIMEDRRAAEIELDTRDGRASNRSKLPQLLHDGDTDDDSYRPSKRARADHRSSAPSDDDLDGMNSSPGRSQRHSREDNPTTDQNEDDQYEEDFDDEAGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLSYVNPKNEHGDFEYVRLISEMVSANKCSLEIDYKQFIYVHPNIAIWLADAPHSVLEVMEDVAKSVVFNLHANYKHIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCGKCGAVLGPFFQNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGVYTNNFDLSLNTKNGFPVFSTVVEANYVTKKQDLFSAYKLTQEDKEEIENLGKDPRIGERIIKSIAPSIYGHDDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKLFTQNVELTDPIISRFDILCVVKDVVDPVTDEMLAKFVVDSHFKSQPKGGNNDSVSESQDASGMPTDPEILPQDLLKKYVTYAKLNVFPRLHDADLNKLSHVYAELRKESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVIQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNDMLIYILRGLVTNALHLEDILTGSTSSLTHVDIKVDDLSFKAQEHEIYDLTPFFNSSIFSNANFELDKERGVIRHYLTR*