Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520000 | XP_003603117.1 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520000 | sp|Q9FMR9|RIN1_ARATH | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520000 | G7J7J7 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041490 | Msa0520000 | 0.813713 | 2.227059e-51 | -8.615850e-47 |
| Msa0140600 | Msa0520000 | 0.982193 | 1.816283e-154 | -8.615850e-47 |
| Msa0381520 | Msa0520000 | 0.994600 | 1.351619e-208 | -8.615850e-47 |
| Msa0520000 | Msa1119100 | 0.821440 | 4.032442e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520000 | MtrunA17_Chr3g0135461 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Msa0520000 | MtrunA17_Chr6g0459171 | 85.714 | 238 | 11 | 2 | 4 | 239 | 1 | 217 | 6.73e-135 | 387 |
| Msa0520000 | MtrunA17_Chr3g0103451 | 44.421 | 466 | 232 | 7 | 1 | 457 | 1 | 448 | 1.29e-120 | 360 |
| Msa0520000 | MtrunA17_Chr6g0459181 | 80.909 | 220 | 7 | 1 | 239 | 458 | 25 | 209 | 1.66e-119 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520000 | AT5G22330.1 | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Msa0520000 | AT3G49830.1 | 42.048 | 459 | 254 | 5 | 1 | 457 | 1 | 449 | 3.64e-120 | 359 |
| Msa0520000 | AT5G67630.1 | 43.777 | 466 | 235 | 7 | 1 | 457 | 1 | 448 | 1.54e-119 | 358 |
Find 157 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTTGTTCACTTTATT+TGG | 0.114144 | 3_4:-72383660 | Msa0520000:CDS |
| GGCGGTAGCGGCTAGGTTTA+AGG | 0.154661 | 3_4:+72388858 | None:intergenic |
| CCTTGCCAGCCATCTTCTTC+TGG | 0.261287 | 3_4:+72387600 | None:intergenic |
| GGCTATCGGTCTACGTATTA+AGG | 0.266184 | 3_4:-72387343 | Msa0520000:CDS |
| GCTACTCACACTCACATTAA+AGG | 0.267682 | 3_4:-72387967 | Msa0520000:CDS |
| AGTATCAGCCATGTGATAAT+TGG | 0.271135 | 3_4:-72387107 | Msa0520000:CDS |
| AATGCAGTCTTTCCGGTTCC+AGG | 0.283045 | 3_4:+72387557 | None:intergenic |
| TGGCATACCTGTTGACCTAT+TGG | 0.318630 | 3_4:-72384168 | Msa0520000:CDS |
| TGTTATACTCTCAGTTTCTT+CGG | 0.319337 | 3_4:+72387145 | None:intergenic |
| AAGTGCTAATGCAGTCTTTC+CGG | 0.320842 | 3_4:+72387550 | None:intergenic |
| TCTACGTATTAAGGAAAATA+AGG | 0.329275 | 3_4:-72387334 | Msa0520000:CDS |
| AAAGAAGACCGAGGTTCTTA+TGG | 0.330990 | 3_4:-72387379 | Msa0520000:CDS |
| GGATGTAACCCTACATGATT+TGG | 0.331586 | 3_4:-72385333 | Msa0520000:CDS |
| TTTGTGGCAAAGATTACTAT+TGG | 0.345084 | 3_4:+72384556 | None:intergenic |
| GTTATACTCTCAGTTTCTTC+GGG | 0.346912 | 3_4:+72387146 | None:intergenic |
| TTAGCTTTCCTTGGGGAGAT+TGG | 0.351825 | 3_4:-72383945 | Msa0520000:CDS |
| CGGTCCAGCTGAAATAATTC+AGG | 0.353377 | 3_4:-72384114 | Msa0520000:intron |
| TCTTCCTAGGTTTCATCATC+TGG | 0.372923 | 3_4:+72385258 | None:intergenic |
| GTTGTCTCTGCCATTTATCT+TGG | 0.373972 | 3_4:+72383791 | None:intergenic |
| ACGTCTACAACATGCTCAAT+AGG | 0.374968 | 3_4:+72383434 | None:intergenic |
| GTTGAGACAAGAAATTAATA+AGG | 0.382068 | 3_4:-72385219 | Msa0520000:intron |
| GGGGTCCAACTTTAGTTGCT+TGG | 0.386390 | 3_4:+72387064 | None:intergenic |
| AGCGTTGTTGCCAAGATAAA+TGG | 0.390480 | 3_4:-72383801 | Msa0520000:CDS |
| GCCGTAAGAGAAAGCGATTC+CGG | 0.392302 | 3_4:-72388838 | Msa0520000:five_prime_UTR |
| GAGGAAAGTTTAGCTTTCCT+TGG | 0.401642 | 3_4:-72383954 | Msa0520000:CDS |
| TTTCTTGTGAACCTCTCCCT+TGG | 0.403331 | 3_4:+72386711 | None:intergenic |
| CAATAGGAAATGCAGCAATT+AGG | 0.406014 | 3_4:+72383450 | None:intergenic |
| GTGCACCGTCGGCGAGCTCT+TGG | 0.411404 | 3_4:+72388813 | None:intergenic |
| AGGAAAGTTTAGCTTTCCTT+GGG | 0.411802 | 3_4:-72383953 | Msa0520000:CDS |
| GCCGGAATCGCTTTCTCTTA+CGG | 0.414767 | 3_4:+72388837 | None:intergenic |
| TTGGGATATGTCAGGAGCTT+GGG | 0.414954 | 3_4:-72387529 | Msa0520000:CDS |
| TCTCCATCTCTTTCTAGATA+AGG | 0.416271 | 3_4:+72388037 | None:intergenic |
| AGTGCATATTCCTCTATTTG+TGG | 0.417327 | 3_4:+72384540 | None:intergenic |
| GGCAAGGCACTCCTTCTCGC+CGG | 0.423804 | 3_4:-72387584 | Msa0520000:CDS |
| GCAAGGCACTCCTTCTCGCC+GGG | 0.424279 | 3_4:-72387583 | Msa0520000:CDS |
| TTCTTGTGAACCTCTCCCTT+GGG | 0.424676 | 3_4:+72386712 | None:intergenic |
| GAAGAAACTGAGAGTATAAC+AGG | 0.425557 | 3_4:-72387143 | Msa0520000:CDS |
| CTCTTACGGCGGTAGCGGCT+AGG | 0.426214 | 3_4:+72388851 | None:intergenic |
| TTTACCTGAATTATTTCAGC+TGG | 0.429224 | 3_4:+72384110 | None:intergenic |
| CAAATAGTGGGGCTGTGAAA+AGG | 0.431610 | 3_4:-72386798 | Msa0520000:CDS |
| GCGGTAGCGGCTAGGTTTAA+GGG | 0.434408 | 3_4:+72388859 | None:intergenic |
| ACAGGTGCATATGCTAGATA+TGG | 0.434605 | 3_4:-72384623 | Msa0520000:intron |
| CAACACCTTCATCGATATAT+CGG | 0.435831 | 3_4:+72384760 | None:intergenic |
| GGTGTTGCAGAACTTGTCCC+TGG | 0.444117 | 3_4:-72384744 | Msa0520000:CDS |
| AATCGATCCAATAGGTCAAC+AGG | 0.450490 | 3_4:+72384161 | None:intergenic |
| TCAGTGATTTCCGTCTTCCT+AGG | 0.453246 | 3_4:+72385245 | None:intergenic |
| GAGAGTATAACAGGAGGTTA+TGG | 0.453991 | 3_4:-72387134 | Msa0520000:CDS |
| CTCTAAAGCACGATTAAGAT+AGG | 0.457106 | 3_4:+72384591 | None:intergenic |
| ATTGCTGTAGCTACTTCATC+AGG | 0.460412 | 3_4:-72388748 | Msa0520000:intron |
| CGCTGTCCAGTGAGCTGAGA+GGG | 0.460788 | 3_4:+72388782 | None:intergenic |
| GTAATCTTTGCCACAAATAG+AGG | 0.461084 | 3_4:-72384550 | Msa0520000:CDS |
| ACACTGTGCAGGTAGCTGTC+GGG | 0.466455 | 3_4:-72386840 | Msa0520000:intron |
| TTGCTGCTCTTGGAGAAGCT+TGG | 0.474441 | 3_4:+72383622 | None:intergenic |
| GCTGCCAACGCGCGACCTCA+AGG | 0.479841 | 3_4:-72385308 | Msa0520000:CDS |
| GAACATACTCCTCAGCTTCA+AGG | 0.485334 | 3_4:+72386740 | None:intergenic |
| GTAGGTTCCATTCTGCCCAA+TGG | 0.486511 | 3_4:-72387430 | Msa0520000:intron |
| TGATCACCAATCGATCCAAT+AGG | 0.490658 | 3_4:+72384153 | None:intergenic |
| TGAACCTCTCCCTTGGGAAG+TGG | 0.494094 | 3_4:+72386718 | None:intergenic |
| ATGCAGTCTTTCCGGTTCCA+GGG | 0.495649 | 3_4:+72387558 | None:intergenic |
| TTGAGCATGTTGTAGACGTA+AGG | 0.496878 | 3_4:-72383430 | Msa0520000:three_prime_UTR |
| TTGGACAACGGACATCTCTA+AGG | 0.496930 | 3_4:-72383926 | Msa0520000:intron |
| TGATGCCTTGATCAAGGAAA+AGG | 0.497216 | 3_4:-72387033 | Msa0520000:intron |
| CATTAAAGGCCTAGGTCTTG+AGG | 0.497845 | 3_4:-72387953 | Msa0520000:intron |
| AGGAACCAAGCAACTAAAGT+TGG | 0.499343 | 3_4:-72387069 | Msa0520000:CDS |
| CGTCGGCGAGCTCTTGGTGC+CGG | 0.499869 | 3_4:+72388819 | None:intergenic |
| ATATATATTGAGGCAAATAG+TGG | 0.501344 | 3_4:-72386811 | Msa0520000:CDS |
| AAATAGTGGGGCTGTGAAAA+GGG | 0.503086 | 3_4:-72386797 | Msa0520000:CDS |
| GTGTTGCAGAACTTGTCCCT+GGG | 0.505714 | 3_4:-72384743 | Msa0520000:CDS |
| ACGGAACCCTCTCAGCTCAC+TGG | 0.509311 | 3_4:-72388788 | Msa0520000:five_prime_UTR |
| TGCCAACGCGCGACCTCAAG+GGG | 0.510126 | 3_4:-72385306 | Msa0520000:CDS |
| CTGCCAACGCGCGACCTCAA+GGG | 0.511088 | 3_4:-72385307 | Msa0520000:CDS |
| GATATATGATGCCTTGATCA+AGG | 0.512614 | 3_4:-72387039 | Msa0520000:CDS |
| AGTTTCTTCGGGAGAGAGCT+CGG | 0.512821 | 3_4:+72387157 | None:intergenic |
| GTTCCATTCTGCCCAATGGT+TGG | 0.513570 | 3_4:-72387426 | Msa0520000:CDS |
| CTTGGGATATGTCAGGAGCT+TGG | 0.517088 | 3_4:-72387530 | Msa0520000:CDS |
| AACAGGTATGCCATGAGGAC+TGG | 0.517649 | 3_4:+72384178 | None:intergenic |
| GAAAATAAGGAAGTATATGA+AGG | 0.518525 | 3_4:-72387321 | Msa0520000:CDS |
| TATATATTGAGGCAAATAGT+GGG | 0.524529 | 3_4:-72386810 | Msa0520000:CDS |
| ATTAGCACTTGGGATATGTC+AGG | 0.527405 | 3_4:-72387537 | Msa0520000:CDS |
| ATAGAGGAATATGCACTGTA+AGG | 0.528143 | 3_4:-72384534 | Msa0520000:intron |
| CCCACAAACCCAGAAGCAAA+AGG | 0.531554 | 3_4:+72387671 | None:intergenic |
| GAACCAACCATTGGGCAGAA+TGG | 0.533082 | 3_4:+72387423 | None:intergenic |
| ATACTTCTGAACCAACCATT+GGG | 0.533730 | 3_4:+72387415 | None:intergenic |
| CACACTGTGCAGGTAGCTGT+CGG | 0.538379 | 3_4:-72386841 | Msa0520000:intron |
| TGGGTTTGTGGGACAAGCTG+AGG | 0.538586 | 3_4:-72387660 | Msa0520000:CDS |
| ATCTTGGCAACAACGCTCGC+AGG | 0.542251 | 3_4:+72383807 | None:intergenic |
| CGGGGATGTTATATATATTG+AGG | 0.543594 | 3_4:-72386821 | Msa0520000:CDS |
| GGAAAGACTGCATTAGCACT+TGG | 0.544549 | 3_4:-72387548 | Msa0520000:CDS |
| GGAGAAGATGAAAATTGAAG+AGG | 0.545555 | 3_4:-72388019 | Msa0520000:CDS |
| ATCAAGGCATCATATATCGT+GGG | 0.547921 | 3_4:+72387044 | None:intergenic |
| CCAGAAGAAGATGGCTGGCA+AGG | 0.548161 | 3_4:-72387600 | Msa0520000:CDS |
| GCTCGCCGACGGTGCACTCA+CGG | 0.549829 | 3_4:-72388807 | Msa0520000:five_prime_UTR |
| TGCAGTCTTTCCGGTTCCAG+GGG | 0.550380 | 3_4:+72387559 | None:intergenic |
| AAACCTTATCTAGAAAGAGA+TGG | 0.551090 | 3_4:-72388040 | Msa0520000:exon |
| AACAAAACGAGAAAGAAGAG+AGG | 0.553707 | 3_4:+72388925 | None:intergenic |
| TATACTTCTGAACCAACCAT+TGG | 0.554977 | 3_4:+72387414 | None:intergenic |
| GTCAACCGATATATCGATGA+AGG | 0.558745 | 3_4:-72384765 | Msa0520000:CDS |
| ATGGAAATAGTTTCCTACCT+AGG | 0.560067 | 3_4:-72383518 | Msa0520000:intron |
| TGTTGACCTATTGGATCGAT+TGG | 0.564185 | 3_4:-72384159 | Msa0520000:CDS |
| ATGTCAGGAGCTTGGGACCA+AGG | 0.564237 | 3_4:-72387522 | Msa0520000:intron |
| CATGATACGCCAGAAGAAGA+TGG | 0.565068 | 3_4:-72387609 | Msa0520000:CDS |
| TCGTCAATAAACAGAACCCC+AGG | 0.567100 | 3_4:+72384726 | None:intergenic |
| ATTGGATTGAAGACAGTGAA+AGG | 0.567859 | 3_4:-72387089 | Msa0520000:CDS |
| CAAGTTCCTCCACTTGAGCT+CGG | 0.568699 | 3_4:+72383985 | None:intergenic |
| TGGCAGCATCCAAATCATGT+AGG | 0.570363 | 3_4:+72385324 | None:intergenic |
| TGGGGTTCTGTTTATTGACG+AGG | 0.574623 | 3_4:-72384724 | Msa0520000:intron |
| ACTGATATGACCAGTCCTCA+TGG | 0.575171 | 3_4:-72384188 | Msa0520000:CDS |
| GGCAGCATCCAAATCATGTA+GGG | 0.577366 | 3_4:+72385325 | None:intergenic |
| AATTATTTCAGCTGGACCGT+AGG | 0.577744 | 3_4:+72384118 | None:intergenic |
| TGTTCCACTTCCCAAGGGAG+AGG | 0.578685 | 3_4:-72386722 | Msa0520000:CDS |
| GGAGGAACTTGCTGTGGATG+AGG | 0.580534 | 3_4:-72383973 | Msa0520000:CDS |
| CACTGTGCAGGTAGCTGTCG+GGG | 0.583392 | 3_4:-72386839 | Msa0520000:intron |
| ATACGCCAGAAGAAGATGGC+TGG | 0.584035 | 3_4:-72387605 | Msa0520000:CDS |
| GCTTTCTCTTACGGCGGTAG+CGG | 0.584795 | 3_4:+72388846 | None:intergenic |
| AAGAGAAGCGTGTGGCCTTG+TGG | 0.587053 | 3_4:-72387636 | Msa0520000:CDS |
| GAAAGACTGCATTAGCACTT+GGG | 0.592181 | 3_4:-72387547 | Msa0520000:CDS |
| TGAGTTTGACCTTGAAGCTG+AGG | 0.593567 | 3_4:-72386749 | Msa0520000:CDS |
| AGTGGGGCTGTGAAAAGGGT+TGG | 0.593627 | 3_4:-72386793 | Msa0520000:CDS |
| GGAGTATGTTCCACTTCCCA+AGG | 0.593628 | 3_4:-72386728 | Msa0520000:CDS |
| CACACTCACATTAAAGGCCT+AGG | 0.594901 | 3_4:-72387961 | Msa0520000:CDS |
| TCTAGCTATCCGAGCTCAAG+TGG | 0.596118 | 3_4:-72383994 | Msa0520000:CDS |
| GGAATCGCTTTCTCTTACGG+CGG | 0.600440 | 3_4:+72388840 | None:intergenic |
| GGGTTCCGTGAGTGCACCGT+CGG | 0.602677 | 3_4:+72388802 | None:intergenic |
| TGGGCCAGATGATGAAACCT+AGG | 0.605557 | 3_4:-72385262 | Msa0520000:CDS |
| GATCAAGGCATCATATATCG+TGG | 0.609216 | 3_4:+72387043 | None:intergenic |
| GATGATGAAACCTAGGAAGA+CGG | 0.610580 | 3_4:-72385255 | Msa0520000:CDS |
| TGAGCATGTTGTAGACGTAA+GGG | 0.610868 | 3_4:-72383429 | Msa0520000:three_prime_UTR |
| ATCATTCGAACACAAACCTA+CGG | 0.612451 | 3_4:-72384134 | Msa0520000:CDS |
| GAGAACAAACCTCAAGACCT+AGG | 0.613415 | 3_4:+72387944 | None:intergenic |
| GGCGTATCATGTCGACCACA+AGG | 0.614191 | 3_4:+72387621 | None:intergenic |
| TAAGGAAGTATATGAAGGCG+AGG | 0.615764 | 3_4:-72387316 | Msa0520000:intron |
| GCAGCAATTAGGCACTTCCA+AGG | 0.619171 | 3_4:+72383461 | None:intergenic |
| TCAAGTGGAGGAACTTGCTG+TGG | 0.623698 | 3_4:-72383979 | Msa0520000:CDS |
| CCAACGCGCGACCTCAAGGG+GGG | 0.640330 | 3_4:-72385304 | Msa0520000:CDS |
| TCCGTTGTCCAATCTCCCCA+AGG | 0.641969 | 3_4:+72383937 | None:intergenic |
| CGGCACCAAGAGCTCGCCGA+CGG | 0.642680 | 3_4:-72388818 | Msa0520000:five_prime_UTR |
| TGTTGCAGAACTTGTCCCTG+GGG | 0.644580 | 3_4:-72384742 | Msa0520000:CDS |
| AGCTATCCGAGCTCAAGTGG+AGG | 0.646357 | 3_4:-72383991 | Msa0520000:CDS |
| CAGTAGCAAAAGCATCACTT+CGG | 0.650349 | 3_4:+72386770 | None:intergenic |
| GCCAACGCGCGACCTCAAGG+GGG | 0.651411 | 3_4:-72385305 | Msa0520000:CDS |
| TCTTCAATCCAATTATCACA+TGG | 0.652745 | 3_4:+72387099 | None:intergenic |
| TGGCAGAGACAACATCTGCA+AGG | 0.661224 | 3_4:-72383781 | Msa0520000:intron |
| TGATGAAGTAGCTACAGCAA+TGG | 0.666224 | 3_4:+72388750 | None:intergenic |
| TCCTTGGGGAGATTGGACAA+CGG | 0.674974 | 3_4:-72383938 | Msa0520000:CDS |
| TGGTTCAGAAGTATACTCAA+CGG | 0.677153 | 3_4:-72387406 | Msa0520000:CDS |
| GAGTATGTTCCACTTCCCAA+GGG | 0.680518 | 3_4:-72386727 | Msa0520000:CDS |
| GCAGTCTTTCCGGTTCCAGG+GGG | 0.687329 | 3_4:+72387560 | None:intergenic |
| ATATATTGAGGCAAATAGTG+GGG | 0.693226 | 3_4:-72386809 | Msa0520000:CDS |
| GGAAAGTTTAGCTTTCCTTG+GGG | 0.696347 | 3_4:-72383952 | Msa0520000:CDS |
| TCAAGGCATCATATATCGTG+GGG | 0.702794 | 3_4:+72387045 | None:intergenic |
| CGTCAATAAACAGAACCCCA+GGG | 0.715606 | 3_4:+72384727 | None:intergenic |
| TCGCTGTCCAGTGAGCTGAG+AGG | 0.721210 | 3_4:+72388781 | None:intergenic |
| ATTCACAGAAGACTATAACA+AGG | 0.722051 | 3_4:+72383395 | None:intergenic |
| GCTGAGGCAAGAGAAGCGTG+TGG | 0.722369 | 3_4:-72387644 | Msa0520000:CDS |
| GAAACTGAGAGTATAACAGG+AGG | 0.727490 | 3_4:-72387140 | Msa0520000:CDS |
| AGGTCAACAGGTATGCCATG+AGG | 0.729642 | 3_4:+72384173 | None:intergenic |
| AACGGAAGTAAAGAAGACCG+AGG | 0.771401 | 3_4:-72387388 | Msa0520000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTATACTTTTATT+TGG | - | chr3_4:72385365-72385384 | Msa0520000:intron | 10.0% |
| !!! | TTTGTTTTATACTTTTATTT+GGG | - | chr3_4:72385366-72385385 | Msa0520000:intron | 10.0% |
| !!! | TTTTAAATCTATACAAATAT+TGG | - | chr3_4:72385412-72385431 | Msa0520000:intron | 10.0% |
| !! | AAAAAAATAAAATAAAGCTT+AGG | - | chr3_4:72385882-72385901 | Msa0520000:intron | 10.0% |
| !! | TTCATTTATTAAAATGAAAT+TGG | - | chr3_4:72387413-72387432 | Msa0520000:CDS | 10.0% |
| !! | CATGATAAAAATAATTAAAA+TGG | + | chr3_4:72388064-72388083 | None:intergenic | 10.0% |
| !! | TAGTAACATTAAAAGAATTA+GGG | + | chr3_4:72384210-72384229 | None:intergenic | 15.0% |
| !! | TTAGTAACATTAAAAGAATT+AGG | + | chr3_4:72384211-72384230 | None:intergenic | 15.0% |
| !! | GAAAAAAACTTATTAAATTG+AGG | + | chr3_4:72384398-72384417 | None:intergenic | 15.0% |
| !!! | TCATTTTTAATTTATGTTTC+TGG | - | chr3_4:72386499-72386518 | Msa0520000:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTCTCAA+AGG | - | chr3_4:72386960-72386979 | Msa0520000:intron | 15.0% |
| !! | TGAATAATAATCATACATGT+TGG | + | chr3_4:72383704-72383723 | None:intergenic | 20.0% |
| !!! | TTGATAGTATTGTGTTTTTT+TGG | - | chr3_4:72384105-72384124 | Msa0520000:intron | 20.0% |
| !!! | TGATAGTATTGTGTTTTTTT+GGG | - | chr3_4:72384106-72384125 | Msa0520000:intron | 20.0% |
| !! | AGTAACATTAAAAGAATTAG+GGG | + | chr3_4:72384209-72384228 | None:intergenic | 20.0% |
| !!! | TAGAATACAAGAATGATTTT+TGG | + | chr3_4:72384825-72384844 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTGATGTGATTT+TGG | - | chr3_4:72385119-72385138 | Msa0520000:intron | 20.0% |
| !!! | ATTCTTTTCTCTTTTTTGAA+AGG | - | chr3_4:72385319-72385338 | Msa0520000:CDS | 20.0% |
| !!! | TTTTATACTTTTATTTGGGT+GGG | - | chr3_4:72385370-72385389 | Msa0520000:intron | 20.0% |
| !! | ACATCACATGAATATAATAA+TGG | + | chr3_4:72385660-72385679 | None:intergenic | 20.0% |
| !! | GTAAATTATATTTGAATCCT+TGG | - | chr3_4:72385701-72385720 | Msa0520000:intron | 20.0% |
| !!! | TTTTATTTTTTTCAGAGCTA+AGG | + | chr3_4:72385874-72385893 | None:intergenic | 20.0% |
| !!! | CACTTTTTAAATTTCTGTTT+AGG | - | chr3_4:72386588-72386607 | Msa0520000:intron | 20.0% |
| !! | AAACATTAAGCAAATTTCTA+TGG | - | chr3_4:72386827-72386846 | Msa0520000:CDS | 20.0% |
| !! | GTTTAAATAAAATTTGTCAG+AGG | - | chr3_4:72386874-72386893 | Msa0520000:intron | 20.0% |
| !! | TGTTTAATTGTTTAACTAGA+AGG | - | chr3_4:72387141-72387160 | Msa0520000:CDS | 20.0% |
| !! | GTTTAATTGTTTAACTAGAA+GGG | - | chr3_4:72387142-72387161 | Msa0520000:CDS | 20.0% |
| !! | TTTAATTGTTTAACTAGAAG+GGG | - | chr3_4:72387143-72387162 | Msa0520000:CDS | 20.0% |
| !!! | TTATGTTACCTTTTTTCATT+TGG | - | chr3_4:72387298-72387317 | Msa0520000:intron | 20.0% |
| !!! | AATAAATTTTGATTGTCCTT+GGG | - | chr3_4:72387366-72387385 | Msa0520000:CDS | 20.0% |
| !! | AAAAGTTTCTTAACACAAAA+TGG | - | chr3_4:72388001-72388020 | Msa0520000:CDS | 20.0% |
| !!! | TGAAATTTGTTCACTTTATT+TGG | - | chr3_4:72388654-72388673 | Msa0520000:intron | 20.0% |
| !!! | TGCTTAGTATTATTTTTGTA+TGG | - | chr3_4:72388777-72388796 | Msa0520000:five_prime_UTR | 20.0% |
| ! | AACAAAACAAACACTTAAAC+TGG | + | chr3_4:72383672-72383691 | None:intergenic | 25.0% |
| ! | TGTGTATATTTAGAAAGATG+AGG | - | chr3_4:72383821-72383840 | Msa0520000:CDS | 25.0% |
| ! | GTGTATATTTAGAAAGATGA+GGG | - | chr3_4:72383822-72383841 | Msa0520000:CDS | 25.0% |
| !!! | CTTCTGATTTTTAAGTCTTT+AGG | - | chr3_4:72383975-72383994 | Msa0520000:CDS | 25.0% |
| !!! | GATAGTATTGTGTTTTTTTG+GGG | - | chr3_4:72384107-72384126 | Msa0520000:intron | 25.0% |
| !!! | ATAGTATTGTGTTTTTTTGG+GGG | - | chr3_4:72384108-72384127 | Msa0520000:intron | 25.0% |
| ! | AAGAAATAAGCAAAAGGATT+TGG | + | chr3_4:72384526-72384545 | None:intergenic | 25.0% |
| ! | ATTTATTTATACCGCTTTGT+AGG | - | chr3_4:72384866-72384885 | Msa0520000:intron | 25.0% |
| !! | AAAATTTTCCATAAGAACCT+CGG | + | chr3_4:72384946-72384965 | None:intergenic | 25.0% |
| !! | TTCTTATGGAAAATTTTCGA+CGG | - | chr3_4:72384949-72384968 | Msa0520000:intron | 25.0% |
| ! | TCTACGTATTAAGGAAAATA+AGG | - | chr3_4:72384980-72384999 | Msa0520000:intron | 25.0% |
| !! | GAAAATAAGGAAGTATATGA+AGG | - | chr3_4:72384993-72385012 | Msa0520000:intron | 25.0% |
| !!! | GTTTTATACTTTTATTTGGG+TGG | - | chr3_4:72385369-72385388 | Msa0520000:intron | 25.0% |
| ! | ATATATATTGAGGCAAATAG+TGG | - | chr3_4:72385503-72385522 | Msa0520000:intron | 25.0% |
| ! | TATATATTGAGGCAAATAGT+GGG | - | chr3_4:72385504-72385523 | Msa0520000:intron | 25.0% |
| !!! | GTTTTGTTTGAAGTTGATAA+TGG | - | chr3_4:72385795-72385814 | Msa0520000:intron | 25.0% |
| !!! | AGCTTAGGATATAATTTGTT+TGG | - | chr3_4:72385897-72385916 | Msa0520000:intron | 25.0% |
| !!! | GCTTAGGATATAATTTGTTT+GGG | - | chr3_4:72385898-72385917 | Msa0520000:intron | 25.0% |
| ! | ATTTGTGTATGTATAGAGAA+TGG | - | chr3_4:72385949-72385968 | Msa0520000:intron | 25.0% |
| ! | TATATGTAATAGTGGTATAG+CGG | + | chr3_4:72386200-72386219 | None:intergenic | 25.0% |
| ! | CTATACCACTATTACATATA+GGG | - | chr3_4:72386200-72386219 | Msa0520000:intron | 25.0% |
| !! | AAAATAAAATAGTGCTGAGT+TGG | - | chr3_4:72386343-72386362 | Msa0520000:intron | 25.0% |
| !! | TATTTCTCATATCGGATTTT+TGG | - | chr3_4:72386705-72386724 | Msa0520000:CDS | 25.0% |
| ! | AAAACCAGTGTTATAAATAG+CGG | + | chr3_4:72386752-72386771 | None:intergenic | 25.0% |
| ! | TAAATAAAATTTGTCAGAGG+AGG | - | chr3_4:72386877-72386896 | Msa0520000:intron | 25.0% |
| !! | CAAGATATTTTGTCTCTTAT+GGG | - | chr3_4:72387033-72387052 | Msa0520000:intron | 25.0% |
| ! | GTTGAGACAAGAAATTAATA+AGG | - | chr3_4:72387095-72387114 | Msa0520000:CDS | 25.0% |
| !! | GTTTTCTTCCAAATGAAAAA+AGG | + | chr3_4:72387309-72387328 | None:intergenic | 25.0% |
| ! | AATCTCATTTCTTAGATTGT+TGG | + | chr3_4:72387331-72387350 | None:intergenic | 25.0% |
| !!! | CAATAAATTTTGATTGTCCT+TGG | - | chr3_4:72387365-72387384 | Msa0520000:CDS | 25.0% |
| ! | GTTTACAAAAATGCTTATGT+TGG | - | chr3_4:72387517-72387536 | Msa0520000:intron | 25.0% |
| !! | TAAATTGCAGGCTTTAATTA+GGG | + | chr3_4:72387637-72387656 | None:intergenic | 25.0% |
| !! | ATAAATTGCAGGCTTTAATT+AGG | + | chr3_4:72387638-72387657 | None:intergenic | 25.0% |
| ! | AGCATTAGAACTTCATTAAA+TGG | + | chr3_4:72387666-72387685 | None:intergenic | 25.0% |
| ! | ATTAAGACCTCAAAAATGAT+GGG | + | chr3_4:72387891-72387910 | None:intergenic | 25.0% |
| !!! | ATTGACTGTTTTTTTTACAG+AGG | - | chr3_4:72388102-72388121 | Msa0520000:intron | 25.0% |
| !!! | TTGACTGTTTTTTTTACAGA+GGG | - | chr3_4:72388103-72388122 | Msa0520000:intron | 25.0% |
| ! | GAAATAATTCAGGTAAATGA+TGG | - | chr3_4:72388210-72388229 | Msa0520000:intron | 25.0% |
| !!! | TATGTGTTGTTTATCATATC+AGG | - | chr3_4:72388463-72388482 | Msa0520000:intron | 25.0% |
| ! | TAGCAACTCAATTAGTTAAA+GGG | + | chr3_4:72388605-72388624 | None:intergenic | 25.0% |
| !! | CTATTTTCAAACTGTTGAAA+TGG | - | chr3_4:72388735-72388754 | Msa0520000:intron | 25.0% |
| ! | TAAGTCTTTAGGCTTTTTGT+CGG | - | chr3_4:72383986-72384005 | Msa0520000:CDS | 30.0% |
| !!! | TAGTATTGTGTTTTTTTGGG+GGG | - | chr3_4:72384109-72384128 | Msa0520000:intron | 30.0% |
| ! | CTCTTTCTAGATAAGGTTTT+CGG | + | chr3_4:72384273-72384292 | None:intergenic | 30.0% |
| AAACCTTATCTAGAAAGAGA+TGG | - | chr3_4:72384274-72384293 | Msa0520000:intron | 30.0% | |
| CTCATTTGGATCTATTGTTA+AGG | + | chr3_4:72384459-72384478 | None:intergenic | 30.0% | |
| CATAGCAAGAAATAAGCAAA+AGG | + | chr3_4:72384532-72384551 | None:intergenic | 30.0% | |
| !!! | GCTAACAACTACTTGTTTTT+TGG | - | chr3_4:72384581-72384600 | Msa0520000:CDS | 30.0% |
| !!! | CAACTACTTGTTTTTTGGTT+TGG | - | chr3_4:72384586-72384605 | Msa0520000:CDS | 30.0% |
| !! | GTTTGGTTATTGTTTTGTTC+AGG | - | chr3_4:72384603-72384622 | Msa0520000:CDS | 30.0% |
| !!! | TGATTTTTGGTACAAAACCT+TGG | + | chr3_4:72384812-72384831 | None:intergenic | 30.0% |
| ! | TCTTATGGAAAATTTTCGAC+GGG | - | chr3_4:72384950-72384969 | Msa0520000:intron | 30.0% |
| AAAATATGTAGCAGACAAAG+TGG | + | chr3_4:72385091-72385110 | None:intergenic | 30.0% | |
| TGTTATACTCTCAGTTTCTT+CGG | + | chr3_4:72385172-72385191 | None:intergenic | 30.0% | |
| TCTTCAATCCAATTATCACA+TGG | + | chr3_4:72385218-72385237 | None:intergenic | 30.0% | |
| ! | ATTCTACAGCTTTGATACAT+GGG | - | chr3_4:72385443-72385462 | Msa0520000:intron | 30.0% |
| ATATATTGAGGCAAATAGTG+GGG | - | chr3_4:72385505-72385524 | Msa0520000:intron | 30.0% | |
| CAAGAAAAAAGAGATTGTTC+AGG | - | chr3_4:72385619-72385638 | Msa0520000:intron | 30.0% | |
| ATGAAACCTGATTCATAGTA+CGG | + | chr3_4:72385734-72385753 | None:intergenic | 30.0% | |
| CATATAGATGATAACAACGT+AGG | - | chr3_4:72385821-72385840 | Msa0520000:intron | 30.0% | |
| !! | AACGTAGGATATAGTTTGTT+TGG | - | chr3_4:72385836-72385855 | Msa0520000:intron | 30.0% |
| !! | ACGTAGGATATAGTTTGTTT+GGG | - | chr3_4:72385837-72385856 | Msa0520000:intron | 30.0% |
| !!! | TATTTTTTTCAGAGCTAAGG+AGG | + | chr3_4:72385871-72385890 | None:intergenic | 30.0% |
| !!! | GGTAACATTTTGATTGTTTC+CGG | - | chr3_4:72385919-72385938 | Msa0520000:intron | 30.0% |
| ACATACACAAATAGTTGTAC+CGG | + | chr3_4:72385941-72385960 | None:intergenic | 30.0% | |
| TGAACTGGAAACAATCAAAA+TGG | + | chr3_4:72385977-72385996 | None:intergenic | 30.0% | |
| ! | TAGAGAATTTAAGCATTGCA+AGG | - | chr3_4:72386013-72386032 | Msa0520000:intron | 30.0% |
| TCTTACAATGGTCAAATATC+AGG | + | chr3_4:72386040-72386059 | None:intergenic | 30.0% | |
| GATGGAAAACTTTCTTACAA+TGG | + | chr3_4:72386052-72386071 | None:intergenic | 30.0% | |
| !!! | ATTTTAATTCAGAGCCTTTG+CGG | + | chr3_4:72386140-72386159 | None:intergenic | 30.0% |
| !! | CAAAGGCTCTGAATTAAAAT+TGG | - | chr3_4:72386140-72386159 | Msa0520000:intron | 30.0% |
| GCTATACCACTATTACATAT+AGG | - | chr3_4:72386199-72386218 | Msa0520000:intron | 30.0% | |
| CAAATCCCTATATGTAATAG+TGG | + | chr3_4:72386208-72386227 | None:intergenic | 30.0% | |
| CACTATTACATATAGGGATT+TGG | - | chr3_4:72386206-72386225 | Msa0520000:intron | 30.0% | |
| AAATCCGATATGAGAAATAG+CGG | + | chr3_4:72386704-72386723 | None:intergenic | 30.0% | |
| ACCTTACTAGAAGAAAAGTA+CGG | + | chr3_4:72386856-72386875 | None:intergenic | 30.0% | |
| !! | GAAAATATTTTTGCAGAGTC+TGG | + | chr3_4:72386904-72386923 | None:intergenic | 30.0% |
| ! | GCAAGATATTTTGTCTCTTA+TGG | - | chr3_4:72387032-72387051 | Msa0520000:intron | 30.0% |
| ACTAAATAGCATCTTCATGA+TGG | + | chr3_4:72387277-72387296 | None:intergenic | 30.0% | |
| AAGAATAACTATTATGCCCA+AGG | + | chr3_4:72387385-72387404 | None:intergenic | 30.0% | |
| ACTTGTGAACAAAAAAGCAA+AGG | - | chr3_4:72387448-72387467 | Msa0520000:intron | 30.0% | |
| CTTGTGAACAAAAAAGCAAA+GGG | - | chr3_4:72387449-72387468 | Msa0520000:intron | 30.0% | |
| AGCAAAGGGTAAAAAAATGT+AGG | - | chr3_4:72387463-72387482 | Msa0520000:intron | 30.0% | |
| GGAGTGATATAAAAACAAGA+AGG | - | chr3_4:72387484-72387503 | Msa0520000:intron | 30.0% | |
| AAATGGATGCAATAAATTGC+AGG | + | chr3_4:72387649-72387668 | None:intergenic | 30.0% | |
| ! | AAGTTCTAATGCTTCTTTAC+AGG | - | chr3_4:72387673-72387692 | Msa0520000:CDS | 30.0% |
| TTTGTGGCAAAGATTACTAT+TGG | + | chr3_4:72387761-72387780 | None:intergenic | 30.0% | |
| ! | TGTATTAAGTTTTGCTGAAG+TGG | - | chr3_4:72387822-72387841 | Msa0520000:intron | 30.0% |
| GATTAAGACCTCAAAAATGA+TGG | + | chr3_4:72387892-72387911 | None:intergenic | 30.0% | |
| ! | TTTGAGGTCTTAATCTTCTT+CGG | - | chr3_4:72387897-72387916 | Msa0520000:intron | 30.0% |
| ! | TGATTTTGCAGTATCTCAAT+GGG | - | chr3_4:72387945-72387964 | Msa0520000:intron | 30.0% |
| ! | TCTCTGTTTTCATGATTAGT+TGG | - | chr3_4:72387973-72387992 | Msa0520000:CDS | 30.0% |
| !! | CTCTGTTTTCATGATTAGTT+GGG | - | chr3_4:72387974-72387993 | Msa0520000:CDS | 30.0% |
| !! | TCTGTTTTCATGATTAGTTG+GGG | - | chr3_4:72387975-72387994 | Msa0520000:CDS | 30.0% |
| TTTACCTGAATTATTTCAGC+TGG | + | chr3_4:72388207-72388226 | None:intergenic | 30.0% | |
| GCTATTTGAAAGAAGGTTAA+GGG | + | chr3_4:72388236-72388255 | None:intergenic | 30.0% | |
| TTGAAAGGCTATTTGAAAGA+AGG | + | chr3_4:72388243-72388262 | None:intergenic | 30.0% | |
| ! | TATGCCAAACATGCTAATTT+TGG | - | chr3_4:72388263-72388282 | Msa0520000:intron | 30.0% |
| ATGCAAATAAGTGTGTATGT+TGG | + | chr3_4:72388294-72388313 | None:intergenic | 30.0% | |
| ACATATAAGTCACATACGAA+AGG | + | chr3_4:72388448-72388467 | None:intergenic | 30.0% | |
| GTAGCAACTCAATTAGTTAA+AGG | + | chr3_4:72388606-72388625 | None:intergenic | 30.0% | |
| !!! | GCTACTGTTTTGAAATTTGT+AGG | - | chr3_4:72388621-72388640 | Msa0520000:intron | 30.0% |
| !!! | ACTGTTTTGAAATTTGTAGG+CGG | - | chr3_4:72388624-72388643 | Msa0520000:intron | 30.0% |
| ATTCACAGAAGACTATAACA+AGG | + | chr3_4:72388922-72388941 | None:intergenic | 30.0% | |
| AGCTTTGCATATGGACATAT+AGG | + | chr3_4:72383896-72383915 | None:intergenic | 35.0% | |
| ! | AAGTCTTTAGGCTTTTTGTC+GGG | - | chr3_4:72383987-72384006 | Msa0520000:CDS | 35.0% |
| !!! | TTTTTTTGGGGGGTTTTCTT+AGG | - | chr3_4:72384119-72384138 | Msa0520000:CDS | 35.0% |
| ! | TTTCGGTTTTCACTTTGCAA+TGG | + | chr3_4:72384256-72384275 | None:intergenic | 35.0% |
| TCTCCATCTCTTTCTAGATA+AGG | + | chr3_4:72384280-72384299 | None:intergenic | 35.0% | |
| GGAGAAGATGAAAATTGAAG+AGG | - | chr3_4:72384295-72384314 | Msa0520000:intron | 35.0% | |
| ACACAAAATCTGTGCTCATT+TGG | + | chr3_4:72384473-72384492 | None:intergenic | 35.0% | |
| !! | TATTGTTTTGTTCAGGTCAG+TGG | - | chr3_4:72384610-72384629 | Msa0520000:CDS | 35.0% |
| ATACTTCTGAACCAACCATT+GGG | + | chr3_4:72384902-72384921 | None:intergenic | 35.0% | |
| TATACTTCTGAACCAACCAT+TGG | + | chr3_4:72384903-72384922 | None:intergenic | 35.0% | |
| ! | TGGTTCAGAAGTATACTCAA+CGG | - | chr3_4:72384908-72384927 | Msa0520000:intron | 35.0% |
| TGTGATTCCCTTGTTAAAAC+TGG | - | chr3_4:72385030-72385049 | Msa0520000:intron | 35.0% | |
| GTGATTCCCTTGTTAAAACT+GGG | - | chr3_4:72385031-72385050 | Msa0520000:intron | 35.0% | |
| !! | CAGATTCCCAGTTTTAACAA+GGG | + | chr3_4:72385040-72385059 | None:intergenic | 35.0% |
| CTTGTTAAAACTGGGAATCT+GGG | - | chr3_4:72385039-72385058 | Msa0520000:intron | 35.0% | |
| GTTATACTCTCAGTTTCTTC+GGG | + | chr3_4:72385171-72385190 | None:intergenic | 35.0% | |
| ! | GAAGAAACTGAGAGTATAAC+AGG | - | chr3_4:72385171-72385190 | Msa0520000:intron | 35.0% |
| AGTATCAGCCATGTGATAAT+TGG | - | chr3_4:72385207-72385226 | Msa0520000:intron | 35.0% | |
| ATTGGATTGAAGACAGTGAA+AGG | - | chr3_4:72385225-72385244 | Msa0520000:CDS | 35.0% | |
| ! | ATCAAGGCATCATATATCGT+GGG | + | chr3_4:72385273-72385292 | None:intergenic | 35.0% |
| GATATATGATGCCTTGATCA+AGG | - | chr3_4:72385275-72385294 | Msa0520000:CDS | 35.0% | |
| ! | CATTCTACAGCTTTGATACA+TGG | - | chr3_4:72385442-72385461 | Msa0520000:intron | 35.0% |
| CGGGGATGTTATATATATTG+AGG | - | chr3_4:72385493-72385512 | Msa0520000:intron | 35.0% | |
| GATAAACCGTACTATGAATC+AGG | - | chr3_4:72385725-72385744 | Msa0520000:intron | 35.0% | |
| !! | CGTAGGATATAGTTTGTTTG+GGG | - | chr3_4:72385838-72385857 | Msa0520000:intron | 35.0% |
| GCATACACAAATAGTTGAAC+TGG | + | chr3_4:72385992-72386011 | None:intergenic | 35.0% | |
| AAAAGTCACCACTATTGCAA+TGG | + | chr3_4:72386274-72386293 | None:intergenic | 35.0% | |
| ATGAAGTGATGAGAGAAGAT+GGG | + | chr3_4:72386445-72386464 | None:intergenic | 35.0% | |
| TATGAAGTGATGAGAGAAGA+TGG | + | chr3_4:72386446-72386465 | None:intergenic | 35.0% | |
| CATTTACTTCAACCACTTTG+CGG | - | chr3_4:72386652-72386671 | Msa0520000:intron | 35.0% | |
| !! | GTGTTATAAATAGCGGATTG+CGG | + | chr3_4:72386745-72386764 | None:intergenic | 35.0% |
| CAATCCGCTATTTATAACAC+TGG | - | chr3_4:72386745-72386764 | Msa0520000:CDS | 35.0% | |
| ! | TCTTTTCGTGAAAGATGATG+AGG | - | chr3_4:72386803-72386822 | Msa0520000:CDS | 35.0% |
| ! | ACCGTACTTTTCTTCTAGTA+AGG | - | chr3_4:72386852-72386871 | Msa0520000:intron | 35.0% |
| !! | TCTAGACACTTGCTATATAC+TGG | - | chr3_4:72386922-72386941 | Msa0520000:intron | 35.0% |
| CAACTCTGACTGATATGTAA+AGG | + | chr3_4:72387171-72387190 | None:intergenic | 35.0% | |
| AGAGTTGTTGTCATGTAATC+AGG | - | chr3_4:72387184-72387203 | Msa0520000:intron | 35.0% | |
| ATAAGTTCAAACACCTGGTA+AGG | - | chr3_4:72387209-72387228 | Msa0520000:intron | 35.0% | |
| !! | AAAATGCTTATGTTGGTGAC+AGG | - | chr3_4:72387524-72387543 | Msa0520000:CDS | 35.0% |
| CAACACCTTCATCGATATAT+CGG | + | chr3_4:72387557-72387576 | None:intergenic | 35.0% | |
| !! | CTCTAAAGCACGATTAAGAT+AGG | + | chr3_4:72387726-72387745 | None:intergenic | 35.0% |
| GTAATCTTTGCCACAAATAG+AGG | - | chr3_4:72387764-72387783 | Msa0520000:intron | 35.0% | |
| AGTGCATATTCCTCTATTTG+TGG | + | chr3_4:72387777-72387796 | None:intergenic | 35.0% | |
| ATAGAGGAATATGCACTGTA+AGG | - | chr3_4:72387780-72387799 | Msa0520000:intron | 35.0% | |
| CATTGAGATACTGCAAAATC+AGG | + | chr3_4:72387946-72387965 | None:intergenic | 35.0% | |
| ! | CTGATTTTGCAGTATCTCAA+TGG | - | chr3_4:72387944-72387963 | Msa0520000:intron | 35.0% |
| ! | GATTTTGCAGTATCTCAATG+GGG | - | chr3_4:72387946-72387965 | Msa0520000:intron | 35.0% |
| ATCATTCGAACACAAACCTA+CGG | - | chr3_4:72388180-72388199 | Msa0520000:intron | 35.0% | |
| GGCTATTTGAAAGAAGGTTA+AGG | + | chr3_4:72388237-72388256 | None:intergenic | 35.0% | |
| AGCATGTTTGGCATATTGAA+AGG | + | chr3_4:72388258-72388277 | None:intergenic | 35.0% | |
| GCATCCAAAATTAGCATGTT+TGG | + | chr3_4:72388270-72388289 | None:intergenic | 35.0% | |
| !! | AGGAAAGTTTAGCTTTCCTT+GGG | - | chr3_4:72388361-72388380 | Msa0520000:intron | 35.0% |
| ! | TGTATTTTTCTTGCTGCTCT+TGG | + | chr3_4:72388705-72388724 | None:intergenic | 35.0% |
| ATGGAAATAGTTTCCTACCT+AGG | - | chr3_4:72388796-72388815 | Msa0520000:five_prime_UTR | 35.0% | |
| GGTCTAACAAAATGGATCAA+AGG | + | chr3_4:72388835-72388854 | None:intergenic | 35.0% | |
| ! | TGATCCATTTTGTTAGACCT+TGG | - | chr3_4:72388836-72388855 | Msa0520000:five_prime_UTR | 35.0% |
| ACTTCCAAGGTCTAACAAAA+TGG | + | chr3_4:72388843-72388862 | None:intergenic | 35.0% | |
| CAATAGGAAATGCAGCAATT+AGG | + | chr3_4:72388867-72388886 | None:intergenic | 35.0% | |
| TGATGAAGTAGCTACAGCAA+TGG | + | chr3_4:72383567-72383586 | None:intergenic | 40.0% | |
| ATTGCTGTAGCTACTTCATC+AGG | - | chr3_4:72383566-72383585 | Msa0520000:three_prime_UTR | 40.0% | |
| ACGTTCATGAGCTTTGCATA+TGG | + | chr3_4:72383905-72383924 | None:intergenic | 40.0% | |
| ! | AGTCTTTAGGCTTTTTGTCG+GGG | - | chr3_4:72383988-72384007 | Msa0520000:CDS | 40.0% |
| GGAAACTGAGACACAAAGAT+AGG | + | chr3_4:72384235-72384254 | None:intergenic | 40.0% | |
| GCTACTCACACTCACATTAA+AGG | - | chr3_4:72384347-72384366 | Msa0520000:intron | 40.0% | |
| ! | TTACACATGCCTGTTTGTTG+CGG | - | chr3_4:72384494-72384513 | Msa0520000:intron | 40.0% |
| ! | AAAGCAGTTCCTTTTGCTTC+TGG | - | chr3_4:72384634-72384653 | Msa0520000:intron | 40.0% |
| ! | AAGCAGTTCCTTTTGCTTCT+GGG | - | chr3_4:72384635-72384654 | Msa0520000:intron | 40.0% |
| AAGTGCTAATGCAGTCTTTC+CGG | + | chr3_4:72384767-72384786 | None:intergenic | 40.0% | |
| GAAAGACTGCATTAGCACTT+GGG | - | chr3_4:72384767-72384786 | Msa0520000:CDS | 40.0% | |
| ATTAGCACTTGGGATATGTC+AGG | - | chr3_4:72384777-72384796 | Msa0520000:intron | 40.0% | |
| AAAGAAGACCGAGGTTCTTA+TGG | - | chr3_4:72384935-72384954 | Msa0520000:intron | 40.0% | |
| !!! | GAAAATTTTCGACGGGCTAT+CGG | - | chr3_4:72384957-72384976 | Msa0520000:intron | 40.0% |
| ! | TAAGGAAGTATATGAAGGCG+AGG | - | chr3_4:72384998-72385017 | Msa0520000:intron | 40.0% |
| !! | CCAGATTCCCAGTTTTAACA+AGG | + | chr3_4:72385041-72385060 | None:intergenic | 40.0% |
| CCTTGTTAAAACTGGGAATC+TGG | - | chr3_4:72385038-72385057 | Msa0520000:intron | 40.0% | |
| !! | AAACTGGGAATCTGGGATTT+TGG | - | chr3_4:72385046-72385065 | Msa0520000:intron | 40.0% |
| AGCAGACAAAGTGGTAACAA+GGG | + | chr3_4:72385082-72385101 | None:intergenic | 40.0% | |
| TAGCAGACAAAGTGGTAACA+AGG | + | chr3_4:72385083-72385102 | None:intergenic | 40.0% | |
| ! | GAAACTGAGAGTATAACAGG+AGG | - | chr3_4:72385174-72385193 | Msa0520000:intron | 40.0% |
| ! | GAGAGTATAACAGGAGGTTA+TGG | - | chr3_4:72385180-72385199 | Msa0520000:intron | 40.0% |
| AGGAACCAAGCAACTAAAGT+TGG | - | chr3_4:72385245-72385264 | Msa0520000:CDS | 40.0% | |
| ! | TCAAGGCATCATATATCGTG+GGG | + | chr3_4:72385272-72385291 | None:intergenic | 40.0% |
| ! | GATCAAGGCATCATATATCG+TGG | + | chr3_4:72385274-72385293 | None:intergenic | 40.0% |
| TGATGCCTTGATCAAGGAAA+AGG | - | chr3_4:72385281-72385300 | Msa0520000:CDS | 40.0% | |
| !! | ACTTTTATTTGGGTGGGAAC+TGG | - | chr3_4:72385376-72385395 | Msa0520000:intron | 40.0% |
| !! | CTTTTATTTGGGTGGGAACT+GGG | - | chr3_4:72385377-72385396 | Msa0520000:intron | 40.0% |
| ! | AAATAGTGGGGCTGTGAAAA+GGG | - | chr3_4:72385517-72385536 | Msa0520000:intron | 40.0% |
| !! | CAGTAGCAAAAGCATCACTT+CGG | + | chr3_4:72385547-72385566 | None:intergenic | 40.0% |
| CTTTGCGGAGTAACATCTTA+GGG | + | chr3_4:72386125-72386144 | None:intergenic | 40.0% | |
| TTCTGCTACCATTGCAATAG+TGG | - | chr3_4:72386263-72386282 | Msa0520000:intron | 40.0% | |
| TGAAGTGATGAGAGAAGATG+GGG | + | chr3_4:72386444-72386463 | None:intergenic | 40.0% | |
| !! | CTGTCCGCTATTTCTCATAT+CGG | - | chr3_4:72386697-72386716 | Msa0520000:CDS | 40.0% |
| !! | TAGCGGATTGCGGAAAATAA+CGG | + | chr3_4:72386735-72386754 | None:intergenic | 40.0% |
| GGATGTAACCCTACATGATT+TGG | - | chr3_4:72386981-72387000 | Msa0520000:intron | 40.0% | |
| TCTTCCTAGGTTTCATCATC+TGG | + | chr3_4:72387059-72387078 | None:intergenic | 40.0% | |
| GATGATGAAACCTAGGAAGA+CGG | - | chr3_4:72387059-72387078 | Msa0520000:CDS | 40.0% | |
| AGGTCATAAGTTCAAACACC+TGG | - | chr3_4:72387204-72387223 | Msa0520000:intron | 40.0% | |
| !! | ATTCTAAAGCAGACCCACAA+TGG | - | chr3_4:72387233-72387252 | Msa0520000:intron | 40.0% |
| !! | TTCTAAAGCAGACCCACAAT+GGG | - | chr3_4:72387234-72387253 | Msa0520000:intron | 40.0% |
| ACATAAAGTCTGCCCATTGT+GGG | + | chr3_4:72387249-72387268 | None:intergenic | 40.0% | |
| GTCAACCGATATATCGATGA+AGG | - | chr3_4:72387549-72387568 | Msa0520000:CDS | 40.0% | |
| ACAGGTGCATATGCTAGATA+TGG | - | chr3_4:72387691-72387710 | Msa0520000:CDS | 40.0% | |
| !! | CTAGTAGCCCATCATTTTTG+AGG | - | chr3_4:72387881-72387900 | Msa0520000:intron | 40.0% |
| ACTGCAAAATCAGGTCTTCT+AGG | + | chr3_4:72387937-72387956 | None:intergenic | 40.0% | |
| AATCGATCCAATAGGTCAAC+AGG | + | chr3_4:72388156-72388175 | None:intergenic | 40.0% | |
| TGTTGACCTATTGGATCGAT+TGG | - | chr3_4:72388155-72388174 | Msa0520000:intron | 40.0% | |
| TGATCACCAATCGATCCAAT+AGG | + | chr3_4:72388164-72388183 | None:intergenic | 40.0% | |
| AATTATTTCAGCTGGACCGT+AGG | + | chr3_4:72388199-72388218 | None:intergenic | 40.0% | |
| !! | GAGGAAAGTTTAGCTTTCCT+TGG | - | chr3_4:72388360-72388379 | Msa0520000:intron | 40.0% |
| !! | GGAAAGTTTAGCTTTCCTTG+GGG | - | chr3_4:72388362-72388381 | Msa0520000:intron | 40.0% |
| AGCGTTGTTGCCAAGATAAA+TGG | - | chr3_4:72388513-72388532 | Msa0520000:intron | 40.0% | |
| ! | GTTGTCTCTGCCATTTATCT+TGG | + | chr3_4:72388526-72388545 | None:intergenic | 40.0% |
| ACGTCTACAACATGCTCAAT+AGG | + | chr3_4:72388883-72388902 | None:intergenic | 40.0% | |
| TTGAGCATGTTGTAGACGTA+AGG | - | chr3_4:72388884-72388903 | Msa0520000:five_prime_UTR | 40.0% | |
| TGAGCATGTTGTAGACGTAA+GGG | - | chr3_4:72388885-72388904 | Msa0520000:five_prime_UTR | 40.0% | |
| CACACTCACATTAAAGGCCT+AGG | - | chr3_4:72384353-72384372 | Msa0520000:intron | 45.0% | |
| CATTAAAGGCCTAGGTCTTG+AGG | - | chr3_4:72384361-72384380 | Msa0520000:intron | 45.0% | |
| GAGAACAAACCTCAAGACCT+AGG | + | chr3_4:72384373-72384392 | None:intergenic | 45.0% | |
| ! | TACACATGCCTGTTTGTTGC+GGG | - | chr3_4:72384495-72384514 | Msa0520000:intron | 45.0% |
| ! | TCCTTTTGCTTCTGGGTTTG+TGG | - | chr3_4:72384642-72384661 | Msa0520000:intron | 45.0% |
| ! | CCTTTTGCTTCTGGGTTTGT+GGG | - | chr3_4:72384643-72384662 | Msa0520000:intron | 45.0% |
| CATGATACGCCAGAAGAAGA+TGG | - | chr3_4:72384705-72384724 | Msa0520000:intron | 45.0% | |
| GGAAAGACTGCATTAGCACT+TGG | - | chr3_4:72384766-72384785 | Msa0520000:CDS | 45.0% | |
| TTGGGATATGTCAGGAGCTT+GGG | - | chr3_4:72384785-72384804 | Msa0520000:intron | 45.0% | |
| GCAGAATGGAACCTACAAAG+CGG | + | chr3_4:72384880-72384899 | None:intergenic | 45.0% | |
| AACGGAAGTAAAGAAGACCG+AGG | - | chr3_4:72384926-72384945 | Msa0520000:intron | 45.0% | |
| GGCTATCGGTCTACGTATTA+AGG | - | chr3_4:72384971-72384990 | Msa0520000:intron | 45.0% | |
| AGTGGTAACAAGGGAATCAC+AGG | + | chr3_4:72385073-72385092 | None:intergenic | 45.0% | |
| !! | TGTGATTTTGGTCCTGTGCA+AGG | - | chr3_4:72385131-72385150 | Msa0520000:intron | 45.0% |
| CCTTGATCAAGGAAAAGGTG+CGG | - | chr3_4:72385286-72385305 | Msa0520000:CDS | 45.0% | |
| ! | CAAATAGTGGGGCTGTGAAA+AGG | - | chr3_4:72385516-72385535 | Msa0520000:intron | 45.0% |
| TGAGTTTGACCTTGAAGCTG+AGG | - | chr3_4:72385565-72385584 | Msa0520000:intron | 45.0% | |
| GAACATACTCCTCAGCTTCA+AGG | + | chr3_4:72385577-72385596 | None:intergenic | 45.0% | |
| GAGTATGTTCCACTTCCCAA+GGG | - | chr3_4:72385587-72385606 | Msa0520000:intron | 45.0% | |
| TTCTTGTGAACCTCTCCCTT+GGG | + | chr3_4:72385605-72385624 | None:intergenic | 45.0% | |
| TTTCTTGTGAACCTCTCCCT+TGG | + | chr3_4:72385606-72385625 | None:intergenic | 45.0% | |
| CATAGTACGGTTTATCGCCA+AGG | + | chr3_4:72385721-72385740 | None:intergenic | 45.0% | |
| GTCTAGCAGAGGAACTAGTT+TGG | - | chr3_4:72386081-72386100 | Msa0520000:intron | 45.0% | |
| ! | TAGCAGAGGAACTAGTTTGG+TGG | - | chr3_4:72386084-72386103 | Msa0520000:intron | 45.0% |
| CCTTTGCGGAGTAACATCTT+AGG | + | chr3_4:72386126-72386145 | None:intergenic | 45.0% | |
| CCTAAGATGTTACTCCGCAA+AGG | - | chr3_4:72386123-72386142 | Msa0520000:intron | 45.0% | |
| GCAGAATCGCAATAGCGTAT+CGG | + | chr3_4:72386249-72386268 | None:intergenic | 45.0% | |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | + | chr3_4:72386393-72386412 | None:intergenic | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | + | chr3_4:72386394-72386413 | None:intergenic | 45.0% |
| TGAGAGGTTACCTAGGTAGT+GGG | + | chr3_4:72386401-72386420 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | + | chr3_4:72386402-72386421 | None:intergenic | 45.0% | |
| TCAGTGATGAGAGGTTACCT+AGG | + | chr3_4:72386408-72386427 | None:intergenic | 45.0% | |
| ACAGCATAGCGCGATATTAG+CGG | + | chr3_4:72386681-72386700 | None:intergenic | 45.0% | |
| GGCAGCATCCAAATCATGTA+GGG | + | chr3_4:72386992-72387011 | None:intergenic | 45.0% | |
| TGGCAGCATCCAAATCATGT+AGG | + | chr3_4:72386993-72387012 | None:intergenic | 45.0% | |
| AAAATATCTTGCCCCCCTTG+AGG | + | chr3_4:72387024-72387043 | None:intergenic | 45.0% | |
| TCAGTGATTTCCGTCTTCCT+AGG | + | chr3_4:72387072-72387091 | None:intergenic | 45.0% | |
| !! | CTGCTTTAGAATGCCTTACC+AGG | + | chr3_4:72387225-72387244 | None:intergenic | 45.0% |
| CACATAAAGTCTGCCCATTG+TGG | + | chr3_4:72387250-72387269 | None:intergenic | 45.0% | |
| CACAATGGGCAGACTTTATG+TGG | - | chr3_4:72387248-72387267 | Msa0520000:intron | 45.0% | |
| CGTCAATAAACAGAACCCCA+GGG | + | chr3_4:72387590-72387609 | None:intergenic | 45.0% | |
| TCGTCAATAAACAGAACCCC+AGG | + | chr3_4:72387591-72387610 | None:intergenic | 45.0% | |
| TGGGGTTCTGTTTATTGACG+AGG | - | chr3_4:72387590-72387609 | Msa0520000:CDS | 45.0% | |
| ACTGATATGACCAGTCCTCA+TGG | - | chr3_4:72388126-72388145 | Msa0520000:intron | 45.0% | |
| TGGCATACCTGTTGACCTAT+TGG | - | chr3_4:72388146-72388165 | Msa0520000:intron | 45.0% | |
| CGGTCCAGCTGAAATAATTC+AGG | - | chr3_4:72388200-72388219 | Msa0520000:intron | 45.0% | |
| ATTGCGTGTTTGTCCTAGGT+AGG | + | chr3_4:72388812-72388831 | None:intergenic | 45.0% | |
| AAGGATTGCGTGTTTGTCCT+AGG | + | chr3_4:72388816-72388835 | None:intergenic | 45.0% | |
| !! | TAGTATTTATATAAAAAATT+TGG | - | chr3_4:72383931-72383950 | Msa0520000:CDS | 5.0% |
| !! | ATGATAAAAATAATTAAAAT+GGG | + | chr3_4:72388063-72388082 | None:intergenic | 5.0% |
| GGAATCGCTTTCTCTTACGG+CGG | + | chr3_4:72383477-72383496 | None:intergenic | 50.0% | |
| GCCGTAAGAGAAAGCGATTC+CGG | - | chr3_4:72383476-72383495 | Msa0520000:intron | 50.0% | |
| GCCGGAATCGCTTTCTCTTA+CGG | + | chr3_4:72383480-72383499 | None:intergenic | 50.0% | |
| CCATAGAGCACGCAGAATTG+TGG | + | chr3_4:72384032-72384051 | None:intergenic | 50.0% | |
| CCACAATTCTGCGTGCTCTA+TGG | - | chr3_4:72384029-72384048 | Msa0520000:intron | 50.0% | |
| TGGTTTCACCCGCAACAAAC+AGG | + | chr3_4:72384506-72384525 | None:intergenic | 50.0% | |
| CCCACAAACCCAGAAGCAAA+AGG | + | chr3_4:72384646-72384665 | None:intergenic | 50.0% | |
| ATACGCCAGAAGAAGATGGC+TGG | - | chr3_4:72384709-72384728 | Msa0520000:intron | 50.0% | |
| ATGCAGTCTTTCCGGTTCCA+GGG | + | chr3_4:72384759-72384778 | None:intergenic | 50.0% | |
| AATGCAGTCTTTCCGGTTCC+AGG | + | chr3_4:72384760-72384779 | None:intergenic | 50.0% | |
| CTTGGGATATGTCAGGAGCT+TGG | - | chr3_4:72384784-72384803 | Msa0520000:intron | 50.0% | |
| GTAGGTTCCATTCTGCCCAA+TGG | - | chr3_4:72384884-72384903 | Msa0520000:intron | 50.0% | |
| GTTCCATTCTGCCCAATGGT+TGG | - | chr3_4:72384888-72384907 | Msa0520000:intron | 50.0% | |
| GAACCAACCATTGGGCAGAA+TGG | + | chr3_4:72384894-72384913 | None:intergenic | 50.0% | |
| AGTTTCTTCGGGAGAGAGCT+CGG | + | chr3_4:72385160-72385179 | None:intergenic | 50.0% | |
| GGGGTCCAACTTTAGTTGCT+TGG | + | chr3_4:72385253-72385272 | None:intergenic | 50.0% | |
| ! | CCGCACCTTTTCCTTGATCA+AGG | + | chr3_4:72385289-72385308 | None:intergenic | 50.0% |
| GGGATTTATGCACACTGTGC+AGG | - | chr3_4:72385463-72385482 | Msa0520000:intron | 50.0% | |
| GGAGTATGTTCCACTTCCCA+AGG | - | chr3_4:72385586-72385605 | Msa0520000:intron | 50.0% | |
| CTGCTAGACTGCTATGCAGA+TGG | + | chr3_4:72386070-72386089 | None:intergenic | 50.0% | |
| TCTGCATAGCAGTCTAGCAG+AGG | - | chr3_4:72386070-72386089 | Msa0520000:intron | 50.0% | |
| !! | GCTGAGTTGGTGATGAGATG+AGG | - | chr3_4:72386356-72386375 | Msa0520000:intron | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | + | chr3_4:72386392-72386411 | None:intergenic | 50.0% |
| GAGAGGTTACCTAGGTAGTG+GGG | + | chr3_4:72386400-72386419 | None:intergenic | 50.0% | |
| AGAGGAGGTTCAGTGATGAG+AGG | + | chr3_4:72386417-72386436 | None:intergenic | 50.0% | |
| AGTGATGAGAGAAGATGGGG+AGG | + | chr3_4:72386441-72386460 | None:intergenic | 50.0% | |
| TATTAGCGGAAGCCGCAAAG+TGG | + | chr3_4:72386667-72386686 | None:intergenic | 50.0% | |
| TGGGCCAGATGATGAAACCT+AGG | - | chr3_4:72387052-72387071 | Msa0520000:CDS | 50.0% | |
| GTGTTGCAGAACTTGTCCCT+GGG | - | chr3_4:72387571-72387590 | Msa0520000:CDS | 50.0% | |
| TGTTGCAGAACTTGTCCCTG+GGG | - | chr3_4:72387572-72387591 | Msa0520000:CDS | 50.0% | |
| AACAGGTATGCCATGAGGAC+TGG | + | chr3_4:72388139-72388158 | None:intergenic | 50.0% | |
| AGGTCAACAGGTATGCCATG+AGG | + | chr3_4:72388144-72388163 | None:intergenic | 50.0% | |
| TCTAGCTATCCGAGCTCAAG+TGG | - | chr3_4:72388320-72388339 | Msa0520000:intron | 50.0% | |
| CAAGTTCCTCCACTTGAGCT+CGG | + | chr3_4:72388332-72388351 | None:intergenic | 50.0% | |
| !! | TCAAGTGGAGGAACTTGCTG+TGG | - | chr3_4:72388335-72388354 | Msa0520000:intron | 50.0% |
| TGGCAGAGACAACATCTGCA+AGG | - | chr3_4:72388533-72388552 | Msa0520000:intron | 50.0% | |
| TTGCTGCTCTTGGAGAAGCT+TGG | + | chr3_4:72388695-72388714 | None:intergenic | 50.0% | |
| GCAGCAATTAGGCACTTCCA+AGG | + | chr3_4:72388856-72388875 | None:intergenic | 50.0% | |
| ! | GCGGTAGCGGCTAGGTTTAA+GGG | + | chr3_4:72383458-72383477 | None:intergenic | 55.0% |
| GCTTTCTCTTACGGCGGTAG+CGG | + | chr3_4:72383471-72383490 | None:intergenic | 55.0% | |
| TGGGTTTGTGGGACAAGCTG+AGG | - | chr3_4:72384654-72384673 | Msa0520000:intron | 55.0% | |
| ! | AAGAGAAGCGTGTGGCCTTG+TGG | - | chr3_4:72384678-72384697 | Msa0520000:intron | 55.0% |
| GGCGTATCATGTCGACCACA+AGG | + | chr3_4:72384696-72384715 | None:intergenic | 55.0% | |
| CCTTGCCAGCCATCTTCTTC+TGG | + | chr3_4:72384717-72384736 | None:intergenic | 55.0% | |
| CCAGAAGAAGATGGCTGGCA+AGG | - | chr3_4:72384714-72384733 | Msa0520000:intron | 55.0% | |
| TGCAGTCTTTCCGGTTCCAG+GGG | + | chr3_4:72384758-72384777 | None:intergenic | 55.0% | |
| ATGTCAGGAGCTTGGGACCA+AGG | - | chr3_4:72384792-72384811 | Msa0520000:intron | 55.0% | |
| CACACTGTGCAGGTAGCTGT+CGG | - | chr3_4:72385473-72385492 | Msa0520000:intron | 55.0% | |
| ACACTGTGCAGGTAGCTGTC+GGG | - | chr3_4:72385474-72385493 | Msa0520000:intron | 55.0% | |
| AGTGGGGCTGTGAAAAGGGT+TGG | - | chr3_4:72385521-72385540 | Msa0520000:intron | 55.0% | |
| TGTTCCACTTCCCAAGGGAG+AGG | - | chr3_4:72385592-72385611 | Msa0520000:intron | 55.0% | |
| TGAACCTCTCCCTTGGGAAG+TGG | + | chr3_4:72385599-72385618 | None:intergenic | 55.0% | |
| ACCCCTAAACCCCACTACCT+AGG | - | chr3_4:72386388-72386407 | Msa0520000:intron | 55.0% | |
| ! | GGTGTTGCAGAACTTGTCCC+TGG | - | chr3_4:72387570-72387589 | Msa0520000:CDS | 55.0% |
| AGCTATCCGAGCTCAAGTGG+AGG | - | chr3_4:72388323-72388342 | Msa0520000:intron | 55.0% | |
| !! | GGAGGAACTTGCTGTGGATG+AGG | - | chr3_4:72388341-72388360 | Msa0520000:intron | 55.0% |
| ATCTTGGCAACAACGCTCGC+AGG | + | chr3_4:72388510-72388529 | None:intergenic | 55.0% | |
| ! | GGCGGTAGCGGCTAGGTTTA+AGG | + | chr3_4:72383459-72383478 | None:intergenic | 60.0% |
| ACGGAACCCTCTCAGCTCAC+TGG | - | chr3_4:72383526-72383545 | Msa0520000:three_prime_UTR | 60.0% | |
| CGCTGTCCAGTGAGCTGAGA+GGG | + | chr3_4:72383535-72383554 | None:intergenic | 60.0% | |
| TCGCTGTCCAGTGAGCTGAG+AGG | + | chr3_4:72383536-72383555 | None:intergenic | 60.0% | |
| ! | GCTGAGGCAAGAGAAGCGTG+TGG | - | chr3_4:72384670-72384689 | Msa0520000:intron | 60.0% |
| GCAGTCTTTCCGGTTCCAGG+GGG | + | chr3_4:72384757-72384776 | None:intergenic | 60.0% | |
| AGAGCTCGGTCACCTTGCAC+AGG | + | chr3_4:72385146-72385165 | None:intergenic | 60.0% | |
| CACTGTGCAGGTAGCTGTCG+GGG | - | chr3_4:72385475-72385494 | Msa0520000:intron | 60.0% | |
| AGAAGATGGGGAGGCAGAGG+AGG | + | chr3_4:72386432-72386451 | None:intergenic | 60.0% | |
| GAGAGAAGATGGGGAGGCAG+AGG | + | chr3_4:72386435-72386454 | None:intergenic | 60.0% | |
| ! | CTCTTACGGCGGTAGCGGCT+AGG | + | chr3_4:72383466-72383485 | None:intergenic | 65.0% |
| GGGTTCCGTGAGTGCACCGT+CGG | + | chr3_4:72383515-72383534 | None:intergenic | 65.0% | |
| ! | GGCAAGGCACTCCTTCTCGC+CGG | - | chr3_4:72384730-72384749 | Msa0520000:CDS | 65.0% |
| ! | GCAAGGCACTCCTTCTCGCC+GGG | - | chr3_4:72384731-72384750 | Msa0520000:CDS | 65.0% |
| CTGCCAACGCGCGACCTCAA+GGG | - | chr3_4:72387007-72387026 | Msa0520000:intron | 65.0% | |
| TGCCAACGCGCGACCTCAAG+GGG | - | chr3_4:72387008-72387027 | Msa0520000:intron | 65.0% | |
| ! | CGTCGGCGAGCTCTTGGTGC+CGG | + | chr3_4:72383498-72383517 | None:intergenic | 70.0% |
| CGGCACCAAGAGCTCGCCGA+CGG | - | chr3_4:72383496-72383515 | Msa0520000:intron | 70.0% | |
| GTGCACCGTCGGCGAGCTCT+TGG | + | chr3_4:72383504-72383523 | None:intergenic | 70.0% | |
| GCTCGCCGACGGTGCACTCA+CGG | - | chr3_4:72383507-72383526 | Msa0520000:intron | 70.0% | |
| CTTTCCGGTTCCAGGGGGCC+CGG | + | chr3_4:72384752-72384771 | None:intergenic | 70.0% | |
| GCTGCCAACGCGCGACCTCA+AGG | - | chr3_4:72387006-72387025 | Msa0520000:intron | 70.0% | |
| GCCAACGCGCGACCTCAAGG+GGG | - | chr3_4:72387009-72387028 | Msa0520000:intron | 70.0% | |
| CCAACGCGCGACCTCAAGGG+GGG | - | chr3_4:72387010-72387029 | Msa0520000:intron | 70.0% | |
| TTCCAGGGGGCCCGGCGAGA+AGG | + | chr3_4:72384744-72384763 | None:intergenic | 75.0% | |
| CCCCCCTTGAGGTCGCGCGT+TGG | + | chr3_4:72387013-72387032 | None:intergenic | 75.0% | |
| ! | CTCCTTCTCGCCGGGCCCCC+TGG | - | chr3_4:72384739-72384758 | Msa0520000:CDS | 80.0% |
| ! | CTCGCCGGGCCCCCTGGAAC+CGG | - | chr3_4:72384745-72384764 | Msa0520000:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 72383392 | 72388944 | 72383392 | ID=Msa0520000;Name=Msa0520000 |
| chr3_4 | mRNA | 72383392 | 72388944 | 72383392 | ID=Msa0520000-mRNA-1;Parent=Msa0520000;Name=Msa0520000-mRNA-1;_AED=0.15;_eAED=0.15;_QI=239|1|1|1|0.84|0.71|14|176|458 |
| chr3_4 | exon | 72383392 | 72383484 | 72383392 | ID=Msa0520000-mRNA-1:exon:19976;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72383521 | 72383693 | 72383521 | ID=Msa0520000-mRNA-1:exon:19975;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72383782 | 72383851 | 72383782 | ID=Msa0520000-mRNA-1:exon:19974;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72383927 | 72384018 | 72383927 | ID=Msa0520000-mRNA-1:exon:19973;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72384115 | 72384214 | 72384115 | ID=Msa0520000-mRNA-1:exon:19972;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72384535 | 72384641 | 72384535 | ID=Msa0520000-mRNA-1:exon:19971;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72384725 | 72384790 | 72384725 | ID=Msa0520000-mRNA-1:exon:19970;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72385220 | 72385354 | 72385220 | ID=Msa0520000-mRNA-1:exon:19969;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72386696 | 72386851 | 72386696 | ID=Msa0520000-mRNA-1:exon:19968;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72387034 | 72387183 | 72387034 | ID=Msa0520000-mRNA-1:exon:19967;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72387317 | 72387448 | 72387317 | ID=Msa0520000-mRNA-1:exon:19966;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72387523 | 72387711 | 72387523 | ID=Msa0520000-mRNA-1:exon:19965;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72387954 | 72388086 | 72387954 | ID=Msa0520000-mRNA-1:exon:19964;Parent=Msa0520000-mRNA-1 |
| chr3_4 | exon | 72388749 | 72388944 | 72388749 | ID=Msa0520000-mRNA-1:exon:19963;Parent=Msa0520000-mRNA-1 |
| chr3_4 | five_prime_UTR | 72388749 | 72388944 | 72388749 | ID=Msa0520000-mRNA-1:five_prime_utr;Parent=Msa0520000-mRNA-1 |
| chr3_4 | five_prime_UTR | 72388044 | 72388086 | 72388044 | ID=Msa0520000-mRNA-1:five_prime_utr;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72387954 | 72388043 | 72387954 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72387523 | 72387711 | 72387523 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72387317 | 72387448 | 72387317 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72387034 | 72387183 | 72387034 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72386696 | 72386851 | 72386696 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72385220 | 72385354 | 72385220 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72384725 | 72384790 | 72384725 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72384535 | 72384641 | 72384535 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72384115 | 72384214 | 72384115 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72383927 | 72384018 | 72383927 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72383782 | 72383851 | 72383782 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | CDS | 72383604 | 72383693 | 72383604 | ID=Msa0520000-mRNA-1:cds;Parent=Msa0520000-mRNA-1 |
| chr3_4 | three_prime_UTR | 72383521 | 72383603 | 72383521 | ID=Msa0520000-mRNA-1:three_prime_utr;Parent=Msa0520000-mRNA-1 |
| chr3_4 | three_prime_UTR | 72383392 | 72383484 | 72383392 | ID=Msa0520000-mRNA-1:three_prime_utr;Parent=Msa0520000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
