Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381520 | XP_003603117.1 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381520 | sp|Q9FMR9|RIN1_ARATH | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381520 | G7J7J7 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041490 | Msa0381520 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
| Msa0140600 | Msa0381520 | 0.977709 | 2.517232e-144 | -8.615850e-47 |
| Msa0381520 | Msa0520000 | 0.994600 | 1.351619e-208 | -8.615850e-47 |
| Msa0381520 | Msa1119100 | 0.826097 | 3.270311e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381520 | MtrunA17_Chr3g0135461 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Msa0381520 | MtrunA17_Chr6g0459171 | 85.714 | 238 | 11 | 2 | 4 | 239 | 1 | 217 | 6.73e-135 | 387 |
| Msa0381520 | MtrunA17_Chr3g0103451 | 44.421 | 466 | 232 | 7 | 1 | 457 | 1 | 448 | 1.29e-120 | 360 |
| Msa0381520 | MtrunA17_Chr6g0459181 | 80.909 | 220 | 7 | 1 | 239 | 458 | 25 | 209 | 1.66e-119 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381520 | AT5G22330.1 | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Msa0381520 | AT3G49830.1 | 42.048 | 459 | 254 | 5 | 1 | 457 | 1 | 449 | 3.64e-120 | 359 |
| Msa0381520 | AT5G67630.1 | 43.777 | 466 | 235 | 7 | 1 | 457 | 1 | 448 | 1.54e-119 | 358 |
Find 157 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTTGTTCACTTTATT+TGG | 0.114144 | 3_1:-83753266 | Msa0381520:CDS |
| GGCGGTAGCGGCTAGGTTTA+AGG | 0.154661 | 3_1:+83758497 | None:intergenic |
| CCTTGCCAGCCATCTTCTTC+TGG | 0.261287 | 3_1:+83757239 | None:intergenic |
| GGCTATCGGTCTACGTATTA+AGG | 0.266184 | 3_1:-83756982 | Msa0381520:CDS |
| GCTACTCACACTCACATTAA+AGG | 0.267682 | 3_1:-83757606 | Msa0381520:CDS |
| AGTATCAGCCATGTGATAAT+TGG | 0.271135 | 3_1:-83756746 | Msa0381520:CDS |
| AATGCAGTCTTTCCGGTTCC+AGG | 0.283045 | 3_1:+83757196 | None:intergenic |
| TGGCATACCTGTTGACCTAT+TGG | 0.318630 | 3_1:-83753774 | Msa0381520:CDS |
| TGTTATACTCTCAGTTTCTT+CGG | 0.319337 | 3_1:+83756784 | None:intergenic |
| AAGTGCTAATGCAGTCTTTC+CGG | 0.320842 | 3_1:+83757189 | None:intergenic |
| TCTACGTATTAAGGAAAATA+AGG | 0.329275 | 3_1:-83756973 | Msa0381520:CDS |
| AAAGAAGACCGAGGTTCTTA+TGG | 0.330990 | 3_1:-83757018 | Msa0381520:CDS |
| GGATGTAACCCTACATGATT+TGG | 0.331586 | 3_1:-83754939 | Msa0381520:CDS |
| TTTGTGGCAAAGATTACTAT+TGG | 0.345084 | 3_1:+83754162 | None:intergenic |
| GTTATACTCTCAGTTTCTTC+GGG | 0.346912 | 3_1:+83756785 | None:intergenic |
| TTAGCTTTCCTTGGGGAGAT+TGG | 0.351825 | 3_1:-83753551 | Msa0381520:CDS |
| CGGTCCAGCTGAAATAATTC+AGG | 0.353377 | 3_1:-83753720 | Msa0381520:intron |
| TCTTCCTAGGTTTCATCATC+TGG | 0.372923 | 3_1:+83754864 | None:intergenic |
| GTTGTCTCTGCCATTTATCT+TGG | 0.373972 | 3_1:+83753397 | None:intergenic |
| ACGTCTACAACATGCTCAAT+AGG | 0.374968 | 3_1:+83753040 | None:intergenic |
| GTTGAGACAAGAAATTAATA+AGG | 0.382068 | 3_1:-83754825 | Msa0381520:intron |
| GGGGTCCAACTTTAGTTGCT+TGG | 0.386390 | 3_1:+83756703 | None:intergenic |
| AGCGTTGTTGCCAAGATAAA+TGG | 0.390480 | 3_1:-83753407 | Msa0381520:CDS |
| GCCGTAAGAGAAAGCGATTC+CGG | 0.392302 | 3_1:-83758477 | Msa0381520:five_prime_UTR |
| GAGGAAAGTTTAGCTTTCCT+TGG | 0.401642 | 3_1:-83753560 | Msa0381520:CDS |
| TTTCTTGTGAACCTCTCCCT+TGG | 0.403331 | 3_1:+83756350 | None:intergenic |
| CAATAGGAAATGCAGCAATT+AGG | 0.406014 | 3_1:+83753056 | None:intergenic |
| GTGCACCGTCGGCGAGCTCT+TGG | 0.411404 | 3_1:+83758452 | None:intergenic |
| AGGAAAGTTTAGCTTTCCTT+GGG | 0.411802 | 3_1:-83753559 | Msa0381520:CDS |
| GCCGGAATCGCTTTCTCTTA+CGG | 0.414767 | 3_1:+83758476 | None:intergenic |
| TTGGGATATGTCAGGAGCTT+GGG | 0.414954 | 3_1:-83757168 | Msa0381520:CDS |
| TCTCCATCTCTTTCTAGATA+AGG | 0.416271 | 3_1:+83757676 | None:intergenic |
| AGTGCATATTCCTCTATTTG+TGG | 0.417327 | 3_1:+83754146 | None:intergenic |
| GGCAAGGCACTCCTTCTCGC+CGG | 0.423804 | 3_1:-83757223 | Msa0381520:CDS |
| GCAAGGCACTCCTTCTCGCC+GGG | 0.424279 | 3_1:-83757222 | Msa0381520:CDS |
| TTCTTGTGAACCTCTCCCTT+GGG | 0.424676 | 3_1:+83756351 | None:intergenic |
| GAAGAAACTGAGAGTATAAC+AGG | 0.425557 | 3_1:-83756782 | Msa0381520:CDS |
| CTCTTACGGCGGTAGCGGCT+AGG | 0.426214 | 3_1:+83758490 | None:intergenic |
| TTTACCTGAATTATTTCAGC+TGG | 0.429224 | 3_1:+83753716 | None:intergenic |
| CAAATAGTGGGGCTGTGAAA+AGG | 0.431610 | 3_1:-83756437 | Msa0381520:CDS |
| GCGGTAGCGGCTAGGTTTAA+GGG | 0.434408 | 3_1:+83758498 | None:intergenic |
| ACAGGTGCATATGCTAGATA+TGG | 0.434605 | 3_1:-83754229 | Msa0381520:intron |
| CAACACCTTCATCGATATAT+CGG | 0.435831 | 3_1:+83754366 | None:intergenic |
| GGTGTTGCAGAACTTGTCCC+TGG | 0.444117 | 3_1:-83754350 | Msa0381520:CDS |
| AATCGATCCAATAGGTCAAC+AGG | 0.450490 | 3_1:+83753767 | None:intergenic |
| TCAGTGATTTCCGTCTTCCT+AGG | 0.453246 | 3_1:+83754851 | None:intergenic |
| GAGAGTATAACAGGAGGTTA+TGG | 0.453991 | 3_1:-83756773 | Msa0381520:CDS |
| CTCTAAAGCACGATTAAGAT+AGG | 0.457106 | 3_1:+83754197 | None:intergenic |
| ATTGCTGTAGCTACTTCATC+AGG | 0.460412 | 3_1:-83758387 | Msa0381520:intron |
| CGCTGTCCAGTGAGCTGAGA+GGG | 0.460788 | 3_1:+83758421 | None:intergenic |
| GTAATCTTTGCCACAAATAG+AGG | 0.461084 | 3_1:-83754156 | Msa0381520:CDS |
| ACACTGTGCAGGTAGCTGTC+GGG | 0.466455 | 3_1:-83756479 | Msa0381520:intron |
| TTGCTGCTCTTGGAGAAGCT+TGG | 0.474441 | 3_1:+83753228 | None:intergenic |
| GCTGCCAACGCGCGACCTCA+AGG | 0.479841 | 3_1:-83754914 | Msa0381520:CDS |
| GAACATACTCCTCAGCTTCA+AGG | 0.485334 | 3_1:+83756379 | None:intergenic |
| GTAGGTTCCATTCTGCCCAA+TGG | 0.486511 | 3_1:-83757069 | Msa0381520:intron |
| TGATCACCAATCGATCCAAT+AGG | 0.490658 | 3_1:+83753759 | None:intergenic |
| TGAACCTCTCCCTTGGGAAG+TGG | 0.494094 | 3_1:+83756357 | None:intergenic |
| ATGCAGTCTTTCCGGTTCCA+GGG | 0.495649 | 3_1:+83757197 | None:intergenic |
| TTGAGCATGTTGTAGACGTA+AGG | 0.496878 | 3_1:-83753036 | Msa0381520:three_prime_UTR |
| TTGGACAACGGACATCTCTA+AGG | 0.496930 | 3_1:-83753532 | Msa0381520:intron |
| TGATGCCTTGATCAAGGAAA+AGG | 0.497216 | 3_1:-83756672 | Msa0381520:intron |
| CATTAAAGGCCTAGGTCTTG+AGG | 0.497845 | 3_1:-83757592 | Msa0381520:intron |
| AGGAACCAAGCAACTAAAGT+TGG | 0.499343 | 3_1:-83756708 | Msa0381520:CDS |
| CGTCGGCGAGCTCTTGGTGC+CGG | 0.499869 | 3_1:+83758458 | None:intergenic |
| ATATATATTGAGGCAAATAG+TGG | 0.501344 | 3_1:-83756450 | Msa0381520:CDS |
| AAATAGTGGGGCTGTGAAAA+GGG | 0.503086 | 3_1:-83756436 | Msa0381520:CDS |
| GTGTTGCAGAACTTGTCCCT+GGG | 0.505714 | 3_1:-83754349 | Msa0381520:CDS |
| ACGGAACCCTCTCAGCTCAC+TGG | 0.509311 | 3_1:-83758427 | Msa0381520:five_prime_UTR |
| TGCCAACGCGCGACCTCAAG+GGG | 0.510126 | 3_1:-83754912 | Msa0381520:CDS |
| CTGCCAACGCGCGACCTCAA+GGG | 0.511088 | 3_1:-83754913 | Msa0381520:CDS |
| GATATATGATGCCTTGATCA+AGG | 0.512614 | 3_1:-83756678 | Msa0381520:CDS |
| AGTTTCTTCGGGAGAGAGCT+CGG | 0.512821 | 3_1:+83756796 | None:intergenic |
| GTTCCATTCTGCCCAATGGT+TGG | 0.513570 | 3_1:-83757065 | Msa0381520:CDS |
| CTTGGGATATGTCAGGAGCT+TGG | 0.517088 | 3_1:-83757169 | Msa0381520:CDS |
| AACAGGTATGCCATGAGGAC+TGG | 0.517649 | 3_1:+83753784 | None:intergenic |
| GAAAATAAGGAAGTATATGA+AGG | 0.518525 | 3_1:-83756960 | Msa0381520:CDS |
| TATATATTGAGGCAAATAGT+GGG | 0.524529 | 3_1:-83756449 | Msa0381520:CDS |
| ATTAGCACTTGGGATATGTC+AGG | 0.527405 | 3_1:-83757176 | Msa0381520:CDS |
| ATAGAGGAATATGCACTGTA+AGG | 0.528143 | 3_1:-83754140 | Msa0381520:intron |
| CCCACAAACCCAGAAGCAAA+AGG | 0.531554 | 3_1:+83757310 | None:intergenic |
| GAACCAACCATTGGGCAGAA+TGG | 0.533082 | 3_1:+83757062 | None:intergenic |
| ATACTTCTGAACCAACCATT+GGG | 0.533730 | 3_1:+83757054 | None:intergenic |
| CACACTGTGCAGGTAGCTGT+CGG | 0.538379 | 3_1:-83756480 | Msa0381520:intron |
| TGGGTTTGTGGGACAAGCTG+AGG | 0.538586 | 3_1:-83757299 | Msa0381520:CDS |
| ATCTTGGCAACAACGCTCGC+AGG | 0.542251 | 3_1:+83753413 | None:intergenic |
| CGGGGATGTTATATATATTG+AGG | 0.543594 | 3_1:-83756460 | Msa0381520:CDS |
| GGAAAGACTGCATTAGCACT+TGG | 0.544549 | 3_1:-83757187 | Msa0381520:CDS |
| GGAGAAGATGAAAATTGAAG+AGG | 0.545555 | 3_1:-83757658 | Msa0381520:CDS |
| ATCAAGGCATCATATATCGT+GGG | 0.547921 | 3_1:+83756683 | None:intergenic |
| CCAGAAGAAGATGGCTGGCA+AGG | 0.548161 | 3_1:-83757239 | Msa0381520:CDS |
| GCTCGCCGACGGTGCACTCA+CGG | 0.549829 | 3_1:-83758446 | Msa0381520:five_prime_UTR |
| TGCAGTCTTTCCGGTTCCAG+GGG | 0.550380 | 3_1:+83757198 | None:intergenic |
| AAACCTTATCTAGAAAGAGA+TGG | 0.551090 | 3_1:-83757679 | Msa0381520:exon |
| AACAAAACGAGAAAGAAGAG+AGG | 0.553707 | 3_1:+83758564 | None:intergenic |
| TATACTTCTGAACCAACCAT+TGG | 0.554977 | 3_1:+83757053 | None:intergenic |
| GTCAACCGATATATCGATGA+AGG | 0.558745 | 3_1:-83754371 | Msa0381520:CDS |
| ATGGAAATAGTTTCCTACCT+AGG | 0.560067 | 3_1:-83753124 | Msa0381520:intron |
| TGTTGACCTATTGGATCGAT+TGG | 0.564185 | 3_1:-83753765 | Msa0381520:CDS |
| ATGTCAGGAGCTTGGGACCA+AGG | 0.564237 | 3_1:-83757161 | Msa0381520:intron |
| CATGATACGCCAGAAGAAGA+TGG | 0.565068 | 3_1:-83757248 | Msa0381520:CDS |
| TCGTCAATAAACAGAACCCC+AGG | 0.567100 | 3_1:+83754332 | None:intergenic |
| ATTGGATTGAAGACAGTGAA+AGG | 0.567859 | 3_1:-83756728 | Msa0381520:CDS |
| CAAGTTCCTCCACTTGAGCT+CGG | 0.568699 | 3_1:+83753591 | None:intergenic |
| TGGCAGCATCCAAATCATGT+AGG | 0.570363 | 3_1:+83754930 | None:intergenic |
| TGGGGTTCTGTTTATTGACG+AGG | 0.574623 | 3_1:-83754330 | Msa0381520:intron |
| ACTGATATGACCAGTCCTCA+TGG | 0.575171 | 3_1:-83753794 | Msa0381520:CDS |
| GGCAGCATCCAAATCATGTA+GGG | 0.577366 | 3_1:+83754931 | None:intergenic |
| AATTATTTCAGCTGGACCGT+AGG | 0.577744 | 3_1:+83753724 | None:intergenic |
| TGTTCCACTTCCCAAGGGAG+AGG | 0.578685 | 3_1:-83756361 | Msa0381520:CDS |
| GGAGGAACTTGCTGTGGATG+AGG | 0.580534 | 3_1:-83753579 | Msa0381520:CDS |
| CACTGTGCAGGTAGCTGTCG+GGG | 0.583392 | 3_1:-83756478 | Msa0381520:intron |
| ATACGCCAGAAGAAGATGGC+TGG | 0.584035 | 3_1:-83757244 | Msa0381520:CDS |
| GCTTTCTCTTACGGCGGTAG+CGG | 0.584795 | 3_1:+83758485 | None:intergenic |
| AAGAGAAGCGTGTGGCCTTG+TGG | 0.587053 | 3_1:-83757275 | Msa0381520:CDS |
| GAAAGACTGCATTAGCACTT+GGG | 0.592181 | 3_1:-83757186 | Msa0381520:CDS |
| TGAGTTTGACCTTGAAGCTG+AGG | 0.593567 | 3_1:-83756388 | Msa0381520:CDS |
| AGTGGGGCTGTGAAAAGGGT+TGG | 0.593627 | 3_1:-83756432 | Msa0381520:CDS |
| GGAGTATGTTCCACTTCCCA+AGG | 0.593628 | 3_1:-83756367 | Msa0381520:CDS |
| CACACTCACATTAAAGGCCT+AGG | 0.594901 | 3_1:-83757600 | Msa0381520:CDS |
| TCTAGCTATCCGAGCTCAAG+TGG | 0.596118 | 3_1:-83753600 | Msa0381520:CDS |
| GGAATCGCTTTCTCTTACGG+CGG | 0.600440 | 3_1:+83758479 | None:intergenic |
| GGGTTCCGTGAGTGCACCGT+CGG | 0.602677 | 3_1:+83758441 | None:intergenic |
| TGGGCCAGATGATGAAACCT+AGG | 0.605557 | 3_1:-83754868 | Msa0381520:CDS |
| GATCAAGGCATCATATATCG+TGG | 0.609216 | 3_1:+83756682 | None:intergenic |
| GATGATGAAACCTAGGAAGA+CGG | 0.610580 | 3_1:-83754861 | Msa0381520:CDS |
| TGAGCATGTTGTAGACGTAA+GGG | 0.610868 | 3_1:-83753035 | Msa0381520:three_prime_UTR |
| ATCATTCGAACACAAACCTA+CGG | 0.612451 | 3_1:-83753740 | Msa0381520:CDS |
| GAGAACAAACCTCAAGACCT+AGG | 0.613415 | 3_1:+83757583 | None:intergenic |
| GGCGTATCATGTCGACCACA+AGG | 0.614191 | 3_1:+83757260 | None:intergenic |
| TAAGGAAGTATATGAAGGCG+AGG | 0.615764 | 3_1:-83756955 | Msa0381520:intron |
| GCAGCAATTAGGCACTTCCA+AGG | 0.619171 | 3_1:+83753067 | None:intergenic |
| TCAAGTGGAGGAACTTGCTG+TGG | 0.623698 | 3_1:-83753585 | Msa0381520:CDS |
| CCAACGCGCGACCTCAAGGG+GGG | 0.640330 | 3_1:-83754910 | Msa0381520:CDS |
| TCCGTTGTCCAATCTCCCCA+AGG | 0.641969 | 3_1:+83753543 | None:intergenic |
| CGGCACCAAGAGCTCGCCGA+CGG | 0.642680 | 3_1:-83758457 | Msa0381520:five_prime_UTR |
| TGTTGCAGAACTTGTCCCTG+GGG | 0.644580 | 3_1:-83754348 | Msa0381520:CDS |
| AGCTATCCGAGCTCAAGTGG+AGG | 0.646357 | 3_1:-83753597 | Msa0381520:CDS |
| CAGTAGCAAAAGCATCACTT+CGG | 0.650349 | 3_1:+83756409 | None:intergenic |
| GCCAACGCGCGACCTCAAGG+GGG | 0.651411 | 3_1:-83754911 | Msa0381520:CDS |
| TCTTCAATCCAATTATCACA+TGG | 0.652745 | 3_1:+83756738 | None:intergenic |
| TGGCAGAGACAACATCTGCA+AGG | 0.661224 | 3_1:-83753387 | Msa0381520:intron |
| TGATGAAGTAGCTACAGCAA+TGG | 0.666224 | 3_1:+83758389 | None:intergenic |
| TCCTTGGGGAGATTGGACAA+CGG | 0.674974 | 3_1:-83753544 | Msa0381520:CDS |
| TGGTTCAGAAGTATACTCAA+CGG | 0.677153 | 3_1:-83757045 | Msa0381520:CDS |
| GAGTATGTTCCACTTCCCAA+GGG | 0.680518 | 3_1:-83756366 | Msa0381520:CDS |
| GCAGTCTTTCCGGTTCCAGG+GGG | 0.687329 | 3_1:+83757199 | None:intergenic |
| ATATATTGAGGCAAATAGTG+GGG | 0.693226 | 3_1:-83756448 | Msa0381520:CDS |
| GGAAAGTTTAGCTTTCCTTG+GGG | 0.696347 | 3_1:-83753558 | Msa0381520:CDS |
| TCAAGGCATCATATATCGTG+GGG | 0.702794 | 3_1:+83756684 | None:intergenic |
| CGTCAATAAACAGAACCCCA+GGG | 0.715606 | 3_1:+83754333 | None:intergenic |
| TCGCTGTCCAGTGAGCTGAG+AGG | 0.721210 | 3_1:+83758420 | None:intergenic |
| ATTCACAGAAGACTATAACA+AGG | 0.722051 | 3_1:+83753001 | None:intergenic |
| GCTGAGGCAAGAGAAGCGTG+TGG | 0.722369 | 3_1:-83757283 | Msa0381520:CDS |
| GAAACTGAGAGTATAACAGG+AGG | 0.727490 | 3_1:-83756779 | Msa0381520:CDS |
| AGGTCAACAGGTATGCCATG+AGG | 0.729642 | 3_1:+83753779 | None:intergenic |
| AACGGAAGTAAAGAAGACCG+AGG | 0.771401 | 3_1:-83757027 | Msa0381520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTATACTTTTATT+TGG | - | chr3_1:83754971-83754990 | Msa0381520:intron | 10.0% |
| !!! | TTTGTTTTATACTTTTATTT+GGG | - | chr3_1:83754972-83754991 | Msa0381520:intron | 10.0% |
| !!! | TTTTAAATCTATACAAATAT+TGG | - | chr3_1:83755018-83755037 | Msa0381520:intron | 10.0% |
| !! | AAAAAAATAAAATAAAGCTT+AGG | - | chr3_1:83755488-83755507 | Msa0381520:intron | 10.0% |
| !! | TTCATTTATTAAAATGAAAT+TGG | - | chr3_1:83757052-83757071 | Msa0381520:CDS | 10.0% |
| !! | CATGATAAAAATAATTAAAA+TGG | + | chr3_1:83757703-83757722 | None:intergenic | 10.0% |
| !! | TAGTAACATTAAAAGAATTA+GGG | + | chr3_1:83753816-83753835 | None:intergenic | 15.0% |
| !! | TTAGTAACATTAAAAGAATT+AGG | + | chr3_1:83753817-83753836 | None:intergenic | 15.0% |
| !! | GAAAAAAACTTATTAAATTG+AGG | + | chr3_1:83754004-83754023 | None:intergenic | 15.0% |
| !!! | TCATTTTTAATTTATGTTTC+TGG | - | chr3_1:83756138-83756157 | Msa0381520:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTCTCAA+AGG | - | chr3_1:83756599-83756618 | Msa0381520:intron | 15.0% |
| !! | TGAATAATAATCATACATGT+TGG | + | chr3_1:83753310-83753329 | None:intergenic | 20.0% |
| !!! | TTGATAGTATTGTGTTTTTT+TGG | - | chr3_1:83753711-83753730 | Msa0381520:intron | 20.0% |
| !!! | TGATAGTATTGTGTTTTTTT+GGG | - | chr3_1:83753712-83753731 | Msa0381520:intron | 20.0% |
| !! | AGTAACATTAAAAGAATTAG+GGG | + | chr3_1:83753815-83753834 | None:intergenic | 20.0% |
| !!! | TAGAATACAAGAATGATTTT+TGG | + | chr3_1:83754431-83754450 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTGATGTGATTT+TGG | - | chr3_1:83754725-83754744 | Msa0381520:intron | 20.0% |
| !!! | ATTCTTTTCTCTTTTTTGAA+AGG | - | chr3_1:83754925-83754944 | Msa0381520:CDS | 20.0% |
| !!! | TTTTATACTTTTATTTGGGT+GGG | - | chr3_1:83754976-83754995 | Msa0381520:intron | 20.0% |
| !! | ACATCACATGAATATAATAA+TGG | + | chr3_1:83755266-83755285 | None:intergenic | 20.0% |
| !! | GTAAATTATATTTGAATCCT+TGG | - | chr3_1:83755307-83755326 | Msa0381520:intron | 20.0% |
| !!! | TTTTATTTTTTTCAGAGCTA+AGG | + | chr3_1:83755480-83755499 | None:intergenic | 20.0% |
| !! | TATACATACACAAATAGTTA+TGG | + | chr3_1:83755583-83755602 | None:intergenic | 20.0% |
| !!! | CACTTTTTAAATTTCTGTTT+AGG | - | chr3_1:83756227-83756246 | Msa0381520:intron | 20.0% |
| !! | AAACATTAAGCAAATTTCTA+TGG | - | chr3_1:83756466-83756485 | Msa0381520:CDS | 20.0% |
| !! | GTTTAAATAAAATTTGTCAG+AGG | - | chr3_1:83756513-83756532 | Msa0381520:intron | 20.0% |
| !! | TGTTTAATTGTTTAACTAGA+AGG | - | chr3_1:83756780-83756799 | Msa0381520:CDS | 20.0% |
| !! | GTTTAATTGTTTAACTAGAA+GGG | - | chr3_1:83756781-83756800 | Msa0381520:CDS | 20.0% |
| !! | TTTAATTGTTTAACTAGAAG+GGG | - | chr3_1:83756782-83756801 | Msa0381520:CDS | 20.0% |
| !!! | TTATGTTACCTTTTTTCATT+TGG | - | chr3_1:83756937-83756956 | Msa0381520:intron | 20.0% |
| !!! | AATAAATTTTGATTGTCCTT+GGG | - | chr3_1:83757005-83757024 | Msa0381520:CDS | 20.0% |
| !! | AAAAGTTTCTTAACACAAAA+TGG | - | chr3_1:83757640-83757659 | Msa0381520:CDS | 20.0% |
| !!! | TGAAATTTGTTCACTTTATT+TGG | - | chr3_1:83758293-83758312 | Msa0381520:intron | 20.0% |
| !!! | TGCTTAGTATTATTTTTGTA+TGG | - | chr3_1:83758416-83758435 | Msa0381520:five_prime_UTR | 20.0% |
| ! | AACAAAACAAACACTTAAAC+TGG | + | chr3_1:83753278-83753297 | None:intergenic | 25.0% |
| ! | TGTGTATATTTAGAAAGATG+AGG | - | chr3_1:83753427-83753446 | Msa0381520:CDS | 25.0% |
| ! | GTGTATATTTAGAAAGATGA+GGG | - | chr3_1:83753428-83753447 | Msa0381520:CDS | 25.0% |
| !!! | CTTCTGATTTTTAAGTCTTT+AGG | - | chr3_1:83753581-83753600 | Msa0381520:CDS | 25.0% |
| !!! | GATAGTATTGTGTTTTTTTG+GGG | - | chr3_1:83753713-83753732 | Msa0381520:intron | 25.0% |
| !!! | ATAGTATTGTGTTTTTTTGG+GGG | - | chr3_1:83753714-83753733 | Msa0381520:intron | 25.0% |
| ! | AAGAAATAAGCAAAAGGATT+TGG | + | chr3_1:83754132-83754151 | None:intergenic | 25.0% |
| ! | ATTTATTTATACCGCTTTGT+AGG | - | chr3_1:83754472-83754491 | Msa0381520:intron | 25.0% |
| !! | AAAATTTTCCATAAGAACCT+CGG | + | chr3_1:83754552-83754571 | None:intergenic | 25.0% |
| !! | TTCTTATGGAAAATTTTCGA+CGG | - | chr3_1:83754555-83754574 | Msa0381520:intron | 25.0% |
| ! | TCTACGTATTAAGGAAAATA+AGG | - | chr3_1:83754586-83754605 | Msa0381520:intron | 25.0% |
| !! | GAAAATAAGGAAGTATATGA+AGG | - | chr3_1:83754599-83754618 | Msa0381520:intron | 25.0% |
| !!! | GTTTTATACTTTTATTTGGG+TGG | - | chr3_1:83754975-83754994 | Msa0381520:intron | 25.0% |
| ! | ATATATATTGAGGCAAATAG+TGG | - | chr3_1:83755109-83755128 | Msa0381520:intron | 25.0% |
| ! | TATATATTGAGGCAAATAGT+GGG | - | chr3_1:83755110-83755129 | Msa0381520:intron | 25.0% |
| !!! | GTTTTGTTTGAAGTTGATAA+TGG | - | chr3_1:83755401-83755420 | Msa0381520:intron | 25.0% |
| !!! | AGCTTAGGATATAATTTGTT+TGG | - | chr3_1:83755503-83755522 | Msa0381520:intron | 25.0% |
| !!! | GCTTAGGATATAATTTGTTT+GGG | - | chr3_1:83755504-83755523 | Msa0381520:intron | 25.0% |
| ! | ATTTGTGTATGTATAGAGAA+TGG | - | chr3_1:83755555-83755574 | Msa0381520:intron | 25.0% |
| ! | ATTTGTGTATGTATAGAGAA+TGG | - | chr3_1:83755555-83755574 | Msa0381520:intron | 25.0% |
| ! | TATATGTAATAGTGGTATAG+CGG | + | chr3_1:83755839-83755858 | None:intergenic | 25.0% |
| ! | CTATACCACTATTACATATA+GGG | - | chr3_1:83755839-83755858 | Msa0381520:intron | 25.0% |
| !! | AAAATAAAATAGTGCTGAGT+TGG | - | chr3_1:83755982-83756001 | Msa0381520:intron | 25.0% |
| !! | TATTTCTCATATCGGATTTT+TGG | - | chr3_1:83756344-83756363 | Msa0381520:CDS | 25.0% |
| ! | AAAACCAGTGTTATAAATAG+CGG | + | chr3_1:83756391-83756410 | None:intergenic | 25.0% |
| ! | TAAATAAAATTTGTCAGAGG+AGG | - | chr3_1:83756516-83756535 | Msa0381520:intron | 25.0% |
| !! | CAAGATATTTTGTCTCTTAT+GGG | - | chr3_1:83756672-83756691 | Msa0381520:intron | 25.0% |
| ! | GTTGAGACAAGAAATTAATA+AGG | - | chr3_1:83756734-83756753 | Msa0381520:CDS | 25.0% |
| !! | GTTTTCTTCCAAATGAAAAA+AGG | + | chr3_1:83756948-83756967 | None:intergenic | 25.0% |
| ! | AATCTCATTTCTTAGATTGT+TGG | + | chr3_1:83756970-83756989 | None:intergenic | 25.0% |
| !!! | CAATAAATTTTGATTGTCCT+TGG | - | chr3_1:83757004-83757023 | Msa0381520:CDS | 25.0% |
| ! | GTTTACAAAAATGCTTATGT+TGG | - | chr3_1:83757156-83757175 | Msa0381520:intron | 25.0% |
| !! | TAAATTGCAGGCTTTAATTA+GGG | + | chr3_1:83757276-83757295 | None:intergenic | 25.0% |
| !! | ATAAATTGCAGGCTTTAATT+AGG | + | chr3_1:83757277-83757296 | None:intergenic | 25.0% |
| ! | AGCATTAGAACTTCATTAAA+TGG | + | chr3_1:83757305-83757324 | None:intergenic | 25.0% |
| ! | ATTAAGACCTCAAAAATGAT+GGG | + | chr3_1:83757530-83757549 | None:intergenic | 25.0% |
| !!! | ATTGACTGTTTTTTTTACAG+AGG | - | chr3_1:83757741-83757760 | Msa0381520:intron | 25.0% |
| !!! | TTGACTGTTTTTTTTACAGA+GGG | - | chr3_1:83757742-83757761 | Msa0381520:intron | 25.0% |
| ! | GAAATAATTCAGGTAAATGA+TGG | - | chr3_1:83757849-83757868 | Msa0381520:intron | 25.0% |
| !!! | TATGTGTTGTTTATCATATC+AGG | - | chr3_1:83758102-83758121 | Msa0381520:intron | 25.0% |
| ! | TAGCAACTCAATTAGTTAAA+GGG | + | chr3_1:83758244-83758263 | None:intergenic | 25.0% |
| !! | CTATTTTCAAACTGTTGAAA+TGG | - | chr3_1:83758374-83758393 | Msa0381520:intron | 25.0% |
| ! | TAAGTCTTTAGGCTTTTTGT+CGG | - | chr3_1:83753592-83753611 | Msa0381520:CDS | 30.0% |
| !!! | TAGTATTGTGTTTTTTTGGG+GGG | - | chr3_1:83753715-83753734 | Msa0381520:intron | 30.0% |
| ! | CTCTTTCTAGATAAGGTTTT+CGG | + | chr3_1:83753879-83753898 | None:intergenic | 30.0% |
| AAACCTTATCTAGAAAGAGA+TGG | - | chr3_1:83753880-83753899 | Msa0381520:intron | 30.0% | |
| CTCATTTGGATCTATTGTTA+AGG | + | chr3_1:83754065-83754084 | None:intergenic | 30.0% | |
| CATAGCAAGAAATAAGCAAA+AGG | + | chr3_1:83754138-83754157 | None:intergenic | 30.0% | |
| !!! | GCTAACAACTACTTGTTTTT+TGG | - | chr3_1:83754187-83754206 | Msa0381520:CDS | 30.0% |
| !!! | CAACTACTTGTTTTTTGGTT+TGG | - | chr3_1:83754192-83754211 | Msa0381520:CDS | 30.0% |
| !! | GTTTGGTTATTGTTTTGTTC+AGG | - | chr3_1:83754209-83754228 | Msa0381520:CDS | 30.0% |
| !!! | TGATTTTTGGTACAAAACCT+TGG | + | chr3_1:83754418-83754437 | None:intergenic | 30.0% |
| ! | TCTTATGGAAAATTTTCGAC+GGG | - | chr3_1:83754556-83754575 | Msa0381520:intron | 30.0% |
| AAAATATGTAGCAGACAAAG+TGG | + | chr3_1:83754697-83754716 | None:intergenic | 30.0% | |
| TGTTATACTCTCAGTTTCTT+CGG | + | chr3_1:83754778-83754797 | None:intergenic | 30.0% | |
| TCTTCAATCCAATTATCACA+TGG | + | chr3_1:83754824-83754843 | None:intergenic | 30.0% | |
| ! | ATTCTACAGCTTTGATACAT+GGG | - | chr3_1:83755049-83755068 | Msa0381520:intron | 30.0% |
| ATATATTGAGGCAAATAGTG+GGG | - | chr3_1:83755111-83755130 | Msa0381520:intron | 30.0% | |
| CAAGAAAAAAGAGATTGTTC+AGG | - | chr3_1:83755225-83755244 | Msa0381520:intron | 30.0% | |
| ATGAAACCTGATTCATAGTA+CGG | + | chr3_1:83755340-83755359 | None:intergenic | 30.0% | |
| CATATAGATGATAACAACGT+AGG | - | chr3_1:83755427-83755446 | Msa0381520:intron | 30.0% | |
| !! | AACGTAGGATATAGTTTGTT+TGG | - | chr3_1:83755442-83755461 | Msa0381520:intron | 30.0% |
| !! | ACGTAGGATATAGTTTGTTT+GGG | - | chr3_1:83755443-83755462 | Msa0381520:intron | 30.0% |
| !!! | TATTTTTTTCAGAGCTAAGG+AGG | + | chr3_1:83755477-83755496 | None:intergenic | 30.0% |
| !!! | GGTAACATTTTGATTGTTTC+CGG | - | chr3_1:83755525-83755544 | Msa0381520:intron | 30.0% |
| ACATACACAAATAGTTGTAC+CGG | + | chr3_1:83755547-83755566 | None:intergenic | 30.0% | |
| TGAACTGGAAACAATCAAAA+TGG | + | chr3_1:83755616-83755635 | None:intergenic | 30.0% | |
| ! | TAGAGAATTTAAGCATTGCA+AGG | - | chr3_1:83755652-83755671 | Msa0381520:intron | 30.0% |
| TCTTACAATGGTCAAATATC+AGG | + | chr3_1:83755679-83755698 | None:intergenic | 30.0% | |
| GATGGAAAACTTTCTTACAA+TGG | + | chr3_1:83755691-83755710 | None:intergenic | 30.0% | |
| !!! | ATTTTAATTCAGAGCCTTTG+CGG | + | chr3_1:83755779-83755798 | None:intergenic | 30.0% |
| !! | CAAAGGCTCTGAATTAAAAT+TGG | - | chr3_1:83755779-83755798 | Msa0381520:intron | 30.0% |
| GCTATACCACTATTACATAT+AGG | - | chr3_1:83755838-83755857 | Msa0381520:intron | 30.0% | |
| CAAATCCCTATATGTAATAG+TGG | + | chr3_1:83755847-83755866 | None:intergenic | 30.0% | |
| CACTATTACATATAGGGATT+TGG | - | chr3_1:83755845-83755864 | Msa0381520:intron | 30.0% | |
| AAATCCGATATGAGAAATAG+CGG | + | chr3_1:83756343-83756362 | None:intergenic | 30.0% | |
| ACCTTACTAGAAGAAAAGTA+CGG | + | chr3_1:83756495-83756514 | None:intergenic | 30.0% | |
| !! | GAAAATATTTTTGCAGAGTC+TGG | + | chr3_1:83756543-83756562 | None:intergenic | 30.0% |
| ! | GCAAGATATTTTGTCTCTTA+TGG | - | chr3_1:83756671-83756690 | Msa0381520:intron | 30.0% |
| ACTAAATAGCATCTTCATGA+TGG | + | chr3_1:83756916-83756935 | None:intergenic | 30.0% | |
| AAGAATAACTATTATGCCCA+AGG | + | chr3_1:83757024-83757043 | None:intergenic | 30.0% | |
| ACTTGTGAACAAAAAAGCAA+AGG | - | chr3_1:83757087-83757106 | Msa0381520:intron | 30.0% | |
| CTTGTGAACAAAAAAGCAAA+GGG | - | chr3_1:83757088-83757107 | Msa0381520:intron | 30.0% | |
| AGCAAAGGGTAAAAAAATGT+AGG | - | chr3_1:83757102-83757121 | Msa0381520:intron | 30.0% | |
| GGAGTGATATAAAAACAAGA+AGG | - | chr3_1:83757123-83757142 | Msa0381520:intron | 30.0% | |
| AAATGGATGCAATAAATTGC+AGG | + | chr3_1:83757288-83757307 | None:intergenic | 30.0% | |
| ! | AAGTTCTAATGCTTCTTTAC+AGG | - | chr3_1:83757312-83757331 | Msa0381520:CDS | 30.0% |
| TTTGTGGCAAAGATTACTAT+TGG | + | chr3_1:83757400-83757419 | None:intergenic | 30.0% | |
| ! | TGTATTAAGTTTTGCTGAAG+TGG | - | chr3_1:83757461-83757480 | Msa0381520:intron | 30.0% |
| GATTAAGACCTCAAAAATGA+TGG | + | chr3_1:83757531-83757550 | None:intergenic | 30.0% | |
| ! | TTTGAGGTCTTAATCTTCTT+CGG | - | chr3_1:83757536-83757555 | Msa0381520:intron | 30.0% |
| ! | TGATTTTGCAGTATCTCAAT+GGG | - | chr3_1:83757584-83757603 | Msa0381520:intron | 30.0% |
| ! | TCTCTGTTTTCATGATTAGT+TGG | - | chr3_1:83757612-83757631 | Msa0381520:CDS | 30.0% |
| !! | CTCTGTTTTCATGATTAGTT+GGG | - | chr3_1:83757613-83757632 | Msa0381520:CDS | 30.0% |
| !! | TCTGTTTTCATGATTAGTTG+GGG | - | chr3_1:83757614-83757633 | Msa0381520:CDS | 30.0% |
| TTTACCTGAATTATTTCAGC+TGG | + | chr3_1:83757846-83757865 | None:intergenic | 30.0% | |
| GCTATTTGAAAGAAGGTTAA+GGG | + | chr3_1:83757875-83757894 | None:intergenic | 30.0% | |
| TTGAAAGGCTATTTGAAAGA+AGG | + | chr3_1:83757882-83757901 | None:intergenic | 30.0% | |
| ! | TATGCCAAACATGCTAATTT+TGG | - | chr3_1:83757902-83757921 | Msa0381520:intron | 30.0% |
| ATGCAAATAAGTGTGTATGT+TGG | + | chr3_1:83757933-83757952 | None:intergenic | 30.0% | |
| ACATATAAGTCACATACGAA+AGG | + | chr3_1:83758087-83758106 | None:intergenic | 30.0% | |
| GTAGCAACTCAATTAGTTAA+AGG | + | chr3_1:83758245-83758264 | None:intergenic | 30.0% | |
| !!! | GCTACTGTTTTGAAATTTGT+AGG | - | chr3_1:83758260-83758279 | Msa0381520:intron | 30.0% |
| !!! | ACTGTTTTGAAATTTGTAGG+CGG | - | chr3_1:83758263-83758282 | Msa0381520:intron | 30.0% |
| ATTCACAGAAGACTATAACA+AGG | + | chr3_1:83758561-83758580 | None:intergenic | 30.0% | |
| AGCTTTGCATATGGACATAT+AGG | + | chr3_1:83753502-83753521 | None:intergenic | 35.0% | |
| ! | AAGTCTTTAGGCTTTTTGTC+GGG | - | chr3_1:83753593-83753612 | Msa0381520:CDS | 35.0% |
| !!! | TTTTTTTGGGGGGTTTTCTT+AGG | - | chr3_1:83753725-83753744 | Msa0381520:CDS | 35.0% |
| ! | TTTCGGTTTTCACTTTGCAA+TGG | + | chr3_1:83753862-83753881 | None:intergenic | 35.0% |
| TCTCCATCTCTTTCTAGATA+AGG | + | chr3_1:83753886-83753905 | None:intergenic | 35.0% | |
| GGAGAAGATGAAAATTGAAG+AGG | - | chr3_1:83753901-83753920 | Msa0381520:intron | 35.0% | |
| ACACAAAATCTGTGCTCATT+TGG | + | chr3_1:83754079-83754098 | None:intergenic | 35.0% | |
| !! | TATTGTTTTGTTCAGGTCAG+TGG | - | chr3_1:83754216-83754235 | Msa0381520:CDS | 35.0% |
| ATACTTCTGAACCAACCATT+GGG | + | chr3_1:83754508-83754527 | None:intergenic | 35.0% | |
| TATACTTCTGAACCAACCAT+TGG | + | chr3_1:83754509-83754528 | None:intergenic | 35.0% | |
| ! | TGGTTCAGAAGTATACTCAA+CGG | - | chr3_1:83754514-83754533 | Msa0381520:intron | 35.0% |
| TGTGATTCCCTTGTTAAAAC+TGG | - | chr3_1:83754636-83754655 | Msa0381520:intron | 35.0% | |
| GTGATTCCCTTGTTAAAACT+GGG | - | chr3_1:83754637-83754656 | Msa0381520:intron | 35.0% | |
| !! | CAGATTCCCAGTTTTAACAA+GGG | + | chr3_1:83754646-83754665 | None:intergenic | 35.0% |
| CTTGTTAAAACTGGGAATCT+GGG | - | chr3_1:83754645-83754664 | Msa0381520:intron | 35.0% | |
| GTTATACTCTCAGTTTCTTC+GGG | + | chr3_1:83754777-83754796 | None:intergenic | 35.0% | |
| ! | GAAGAAACTGAGAGTATAAC+AGG | - | chr3_1:83754777-83754796 | Msa0381520:intron | 35.0% |
| AGTATCAGCCATGTGATAAT+TGG | - | chr3_1:83754813-83754832 | Msa0381520:intron | 35.0% | |
| ATTGGATTGAAGACAGTGAA+AGG | - | chr3_1:83754831-83754850 | Msa0381520:CDS | 35.0% | |
| ! | ATCAAGGCATCATATATCGT+GGG | + | chr3_1:83754879-83754898 | None:intergenic | 35.0% |
| GATATATGATGCCTTGATCA+AGG | - | chr3_1:83754881-83754900 | Msa0381520:CDS | 35.0% | |
| ! | CATTCTACAGCTTTGATACA+TGG | - | chr3_1:83755048-83755067 | Msa0381520:intron | 35.0% |
| CGGGGATGTTATATATATTG+AGG | - | chr3_1:83755099-83755118 | Msa0381520:intron | 35.0% | |
| GATAAACCGTACTATGAATC+AGG | - | chr3_1:83755331-83755350 | Msa0381520:intron | 35.0% | |
| !! | CGTAGGATATAGTTTGTTTG+GGG | - | chr3_1:83755444-83755463 | Msa0381520:intron | 35.0% |
| GCATACACAAATAGTTGAAC+TGG | + | chr3_1:83755631-83755650 | None:intergenic | 35.0% | |
| AAAAGTCACCACTATTGCAA+TGG | + | chr3_1:83755913-83755932 | None:intergenic | 35.0% | |
| ATGAAGTGATGAGAGAAGAT+GGG | + | chr3_1:83756084-83756103 | None:intergenic | 35.0% | |
| TATGAAGTGATGAGAGAAGA+TGG | + | chr3_1:83756085-83756104 | None:intergenic | 35.0% | |
| CATTTACTTCAACCACTTTG+CGG | - | chr3_1:83756291-83756310 | Msa0381520:intron | 35.0% | |
| !! | GTGTTATAAATAGCGGATTG+CGG | + | chr3_1:83756384-83756403 | None:intergenic | 35.0% |
| CAATCCGCTATTTATAACAC+TGG | - | chr3_1:83756384-83756403 | Msa0381520:CDS | 35.0% | |
| ! | TCTTTTCGTGAAAGATGATG+AGG | - | chr3_1:83756442-83756461 | Msa0381520:CDS | 35.0% |
| ! | ACCGTACTTTTCTTCTAGTA+AGG | - | chr3_1:83756491-83756510 | Msa0381520:intron | 35.0% |
| !! | TCTAGACACTTGCTATATAC+TGG | - | chr3_1:83756561-83756580 | Msa0381520:intron | 35.0% |
| CAACTCTGACTGATATGTAA+AGG | + | chr3_1:83756810-83756829 | None:intergenic | 35.0% | |
| AGAGTTGTTGTCATGTAATC+AGG | - | chr3_1:83756823-83756842 | Msa0381520:intron | 35.0% | |
| ATAAGTTCAAACACCTGGTA+AGG | - | chr3_1:83756848-83756867 | Msa0381520:intron | 35.0% | |
| !! | AAAATGCTTATGTTGGTGAC+AGG | - | chr3_1:83757163-83757182 | Msa0381520:CDS | 35.0% |
| CAACACCTTCATCGATATAT+CGG | + | chr3_1:83757196-83757215 | None:intergenic | 35.0% | |
| !! | CTCTAAAGCACGATTAAGAT+AGG | + | chr3_1:83757365-83757384 | None:intergenic | 35.0% |
| GTAATCTTTGCCACAAATAG+AGG | - | chr3_1:83757403-83757422 | Msa0381520:intron | 35.0% | |
| AGTGCATATTCCTCTATTTG+TGG | + | chr3_1:83757416-83757435 | None:intergenic | 35.0% | |
| ATAGAGGAATATGCACTGTA+AGG | - | chr3_1:83757419-83757438 | Msa0381520:intron | 35.0% | |
| CATTGAGATACTGCAAAATC+AGG | + | chr3_1:83757585-83757604 | None:intergenic | 35.0% | |
| ! | CTGATTTTGCAGTATCTCAA+TGG | - | chr3_1:83757583-83757602 | Msa0381520:intron | 35.0% |
| ! | GATTTTGCAGTATCTCAATG+GGG | - | chr3_1:83757585-83757604 | Msa0381520:intron | 35.0% |
| ATCATTCGAACACAAACCTA+CGG | - | chr3_1:83757819-83757838 | Msa0381520:intron | 35.0% | |
| GGCTATTTGAAAGAAGGTTA+AGG | + | chr3_1:83757876-83757895 | None:intergenic | 35.0% | |
| AGCATGTTTGGCATATTGAA+AGG | + | chr3_1:83757897-83757916 | None:intergenic | 35.0% | |
| GCATCCAAAATTAGCATGTT+TGG | + | chr3_1:83757909-83757928 | None:intergenic | 35.0% | |
| !! | AGGAAAGTTTAGCTTTCCTT+GGG | - | chr3_1:83758000-83758019 | Msa0381520:intron | 35.0% |
| ! | TGTATTTTTCTTGCTGCTCT+TGG | + | chr3_1:83758344-83758363 | None:intergenic | 35.0% |
| ATGGAAATAGTTTCCTACCT+AGG | - | chr3_1:83758435-83758454 | Msa0381520:five_prime_UTR | 35.0% | |
| GGTCTAACAAAATGGATCAA+AGG | + | chr3_1:83758474-83758493 | None:intergenic | 35.0% | |
| ! | TGATCCATTTTGTTAGACCT+TGG | - | chr3_1:83758475-83758494 | Msa0381520:five_prime_UTR | 35.0% |
| ACTTCCAAGGTCTAACAAAA+TGG | + | chr3_1:83758482-83758501 | None:intergenic | 35.0% | |
| CAATAGGAAATGCAGCAATT+AGG | + | chr3_1:83758506-83758525 | None:intergenic | 35.0% | |
| TGATGAAGTAGCTACAGCAA+TGG | + | chr3_1:83753173-83753192 | None:intergenic | 40.0% | |
| ATTGCTGTAGCTACTTCATC+AGG | - | chr3_1:83753172-83753191 | Msa0381520:three_prime_UTR | 40.0% | |
| ACGTTCATGAGCTTTGCATA+TGG | + | chr3_1:83753511-83753530 | None:intergenic | 40.0% | |
| ! | AGTCTTTAGGCTTTTTGTCG+GGG | - | chr3_1:83753594-83753613 | Msa0381520:CDS | 40.0% |
| GGAAACTGAGACACAAAGAT+AGG | + | chr3_1:83753841-83753860 | None:intergenic | 40.0% | |
| GCTACTCACACTCACATTAA+AGG | - | chr3_1:83753953-83753972 | Msa0381520:intron | 40.0% | |
| ! | TTACACATGCCTGTTTGTTG+CGG | - | chr3_1:83754100-83754119 | Msa0381520:intron | 40.0% |
| ! | AAAGCAGTTCCTTTTGCTTC+TGG | - | chr3_1:83754240-83754259 | Msa0381520:intron | 40.0% |
| ! | AAGCAGTTCCTTTTGCTTCT+GGG | - | chr3_1:83754241-83754260 | Msa0381520:intron | 40.0% |
| AAGTGCTAATGCAGTCTTTC+CGG | + | chr3_1:83754373-83754392 | None:intergenic | 40.0% | |
| GAAAGACTGCATTAGCACTT+GGG | - | chr3_1:83754373-83754392 | Msa0381520:CDS | 40.0% | |
| ATTAGCACTTGGGATATGTC+AGG | - | chr3_1:83754383-83754402 | Msa0381520:intron | 40.0% | |
| AAAGAAGACCGAGGTTCTTA+TGG | - | chr3_1:83754541-83754560 | Msa0381520:intron | 40.0% | |
| !!! | GAAAATTTTCGACGGGCTAT+CGG | - | chr3_1:83754563-83754582 | Msa0381520:intron | 40.0% |
| ! | TAAGGAAGTATATGAAGGCG+AGG | - | chr3_1:83754604-83754623 | Msa0381520:intron | 40.0% |
| !! | CCAGATTCCCAGTTTTAACA+AGG | + | chr3_1:83754647-83754666 | None:intergenic | 40.0% |
| CCTTGTTAAAACTGGGAATC+TGG | - | chr3_1:83754644-83754663 | Msa0381520:intron | 40.0% | |
| !! | AAACTGGGAATCTGGGATTT+TGG | - | chr3_1:83754652-83754671 | Msa0381520:intron | 40.0% |
| AGCAGACAAAGTGGTAACAA+GGG | + | chr3_1:83754688-83754707 | None:intergenic | 40.0% | |
| TAGCAGACAAAGTGGTAACA+AGG | + | chr3_1:83754689-83754708 | None:intergenic | 40.0% | |
| ! | GAAACTGAGAGTATAACAGG+AGG | - | chr3_1:83754780-83754799 | Msa0381520:intron | 40.0% |
| ! | GAGAGTATAACAGGAGGTTA+TGG | - | chr3_1:83754786-83754805 | Msa0381520:intron | 40.0% |
| AGGAACCAAGCAACTAAAGT+TGG | - | chr3_1:83754851-83754870 | Msa0381520:CDS | 40.0% | |
| ! | TCAAGGCATCATATATCGTG+GGG | + | chr3_1:83754878-83754897 | None:intergenic | 40.0% |
| ! | GATCAAGGCATCATATATCG+TGG | + | chr3_1:83754880-83754899 | None:intergenic | 40.0% |
| TGATGCCTTGATCAAGGAAA+AGG | - | chr3_1:83754887-83754906 | Msa0381520:CDS | 40.0% | |
| !! | ACTTTTATTTGGGTGGGAAC+TGG | - | chr3_1:83754982-83755001 | Msa0381520:intron | 40.0% |
| !! | CTTTTATTTGGGTGGGAACT+GGG | - | chr3_1:83754983-83755002 | Msa0381520:intron | 40.0% |
| ! | AAATAGTGGGGCTGTGAAAA+GGG | - | chr3_1:83755123-83755142 | Msa0381520:intron | 40.0% |
| !! | CAGTAGCAAAAGCATCACTT+CGG | + | chr3_1:83755153-83755172 | None:intergenic | 40.0% |
| CTTTGCGGAGTAACATCTTA+GGG | + | chr3_1:83755764-83755783 | None:intergenic | 40.0% | |
| TTCTGCTACCATTGCAATAG+TGG | - | chr3_1:83755902-83755921 | Msa0381520:intron | 40.0% | |
| TGAAGTGATGAGAGAAGATG+GGG | + | chr3_1:83756083-83756102 | None:intergenic | 40.0% | |
| !! | CTGTCCGCTATTTCTCATAT+CGG | - | chr3_1:83756336-83756355 | Msa0381520:CDS | 40.0% |
| !! | TAGCGGATTGCGGAAAATAA+CGG | + | chr3_1:83756374-83756393 | None:intergenic | 40.0% |
| GGATGTAACCCTACATGATT+TGG | - | chr3_1:83756620-83756639 | Msa0381520:intron | 40.0% | |
| TCTTCCTAGGTTTCATCATC+TGG | + | chr3_1:83756698-83756717 | None:intergenic | 40.0% | |
| GATGATGAAACCTAGGAAGA+CGG | - | chr3_1:83756698-83756717 | Msa0381520:CDS | 40.0% | |
| AGGTCATAAGTTCAAACACC+TGG | - | chr3_1:83756843-83756862 | Msa0381520:intron | 40.0% | |
| !! | ATTCTAAAGCAGACCCACAA+TGG | - | chr3_1:83756872-83756891 | Msa0381520:intron | 40.0% |
| !! | TTCTAAAGCAGACCCACAAT+GGG | - | chr3_1:83756873-83756892 | Msa0381520:intron | 40.0% |
| ACATAAAGTCTGCCCATTGT+GGG | + | chr3_1:83756888-83756907 | None:intergenic | 40.0% | |
| GTCAACCGATATATCGATGA+AGG | - | chr3_1:83757188-83757207 | Msa0381520:CDS | 40.0% | |
| ACAGGTGCATATGCTAGATA+TGG | - | chr3_1:83757330-83757349 | Msa0381520:CDS | 40.0% | |
| !! | CTAGTAGCCCATCATTTTTG+AGG | - | chr3_1:83757520-83757539 | Msa0381520:intron | 40.0% |
| ACTGCAAAATCAGGTCTTCT+AGG | + | chr3_1:83757576-83757595 | None:intergenic | 40.0% | |
| AATCGATCCAATAGGTCAAC+AGG | + | chr3_1:83757795-83757814 | None:intergenic | 40.0% | |
| TGTTGACCTATTGGATCGAT+TGG | - | chr3_1:83757794-83757813 | Msa0381520:intron | 40.0% | |
| TGATCACCAATCGATCCAAT+AGG | + | chr3_1:83757803-83757822 | None:intergenic | 40.0% | |
| AATTATTTCAGCTGGACCGT+AGG | + | chr3_1:83757838-83757857 | None:intergenic | 40.0% | |
| !! | GAGGAAAGTTTAGCTTTCCT+TGG | - | chr3_1:83757999-83758018 | Msa0381520:intron | 40.0% |
| !! | GGAAAGTTTAGCTTTCCTTG+GGG | - | chr3_1:83758001-83758020 | Msa0381520:intron | 40.0% |
| AGCGTTGTTGCCAAGATAAA+TGG | - | chr3_1:83758152-83758171 | Msa0381520:intron | 40.0% | |
| ! | GTTGTCTCTGCCATTTATCT+TGG | + | chr3_1:83758165-83758184 | None:intergenic | 40.0% |
| ACGTCTACAACATGCTCAAT+AGG | + | chr3_1:83758522-83758541 | None:intergenic | 40.0% | |
| TTGAGCATGTTGTAGACGTA+AGG | - | chr3_1:83758523-83758542 | Msa0381520:five_prime_UTR | 40.0% | |
| TGAGCATGTTGTAGACGTAA+GGG | - | chr3_1:83758524-83758543 | Msa0381520:five_prime_UTR | 40.0% | |
| CACACTCACATTAAAGGCCT+AGG | - | chr3_1:83753959-83753978 | Msa0381520:intron | 45.0% | |
| CATTAAAGGCCTAGGTCTTG+AGG | - | chr3_1:83753967-83753986 | Msa0381520:intron | 45.0% | |
| GAGAACAAACCTCAAGACCT+AGG | + | chr3_1:83753979-83753998 | None:intergenic | 45.0% | |
| ! | TACACATGCCTGTTTGTTGC+GGG | - | chr3_1:83754101-83754120 | Msa0381520:intron | 45.0% |
| ! | TCCTTTTGCTTCTGGGTTTG+TGG | - | chr3_1:83754248-83754267 | Msa0381520:intron | 45.0% |
| ! | CCTTTTGCTTCTGGGTTTGT+GGG | - | chr3_1:83754249-83754268 | Msa0381520:intron | 45.0% |
| CATGATACGCCAGAAGAAGA+TGG | - | chr3_1:83754311-83754330 | Msa0381520:intron | 45.0% | |
| GGAAAGACTGCATTAGCACT+TGG | - | chr3_1:83754372-83754391 | Msa0381520:CDS | 45.0% | |
| TTGGGATATGTCAGGAGCTT+GGG | - | chr3_1:83754391-83754410 | Msa0381520:intron | 45.0% | |
| GCAGAATGGAACCTACAAAG+CGG | + | chr3_1:83754486-83754505 | None:intergenic | 45.0% | |
| AACGGAAGTAAAGAAGACCG+AGG | - | chr3_1:83754532-83754551 | Msa0381520:intron | 45.0% | |
| GGCTATCGGTCTACGTATTA+AGG | - | chr3_1:83754577-83754596 | Msa0381520:intron | 45.0% | |
| AGTGGTAACAAGGGAATCAC+AGG | + | chr3_1:83754679-83754698 | None:intergenic | 45.0% | |
| !! | TGTGATTTTGGTCCTGTGCA+AGG | - | chr3_1:83754737-83754756 | Msa0381520:intron | 45.0% |
| CCTTGATCAAGGAAAAGGTG+CGG | - | chr3_1:83754892-83754911 | Msa0381520:CDS | 45.0% | |
| ! | CAAATAGTGGGGCTGTGAAA+AGG | - | chr3_1:83755122-83755141 | Msa0381520:intron | 45.0% |
| TGAGTTTGACCTTGAAGCTG+AGG | - | chr3_1:83755171-83755190 | Msa0381520:intron | 45.0% | |
| GAACATACTCCTCAGCTTCA+AGG | + | chr3_1:83755183-83755202 | None:intergenic | 45.0% | |
| GAGTATGTTCCACTTCCCAA+GGG | - | chr3_1:83755193-83755212 | Msa0381520:intron | 45.0% | |
| TTCTTGTGAACCTCTCCCTT+GGG | + | chr3_1:83755211-83755230 | None:intergenic | 45.0% | |
| TTTCTTGTGAACCTCTCCCT+TGG | + | chr3_1:83755212-83755231 | None:intergenic | 45.0% | |
| CATAGTACGGTTTATCGCCA+AGG | + | chr3_1:83755327-83755346 | None:intergenic | 45.0% | |
| GTCTAGCAGAGGAACTAGTT+TGG | - | chr3_1:83755720-83755739 | Msa0381520:intron | 45.0% | |
| ! | TAGCAGAGGAACTAGTTTGG+TGG | - | chr3_1:83755723-83755742 | Msa0381520:intron | 45.0% |
| CCTTTGCGGAGTAACATCTT+AGG | + | chr3_1:83755765-83755784 | None:intergenic | 45.0% | |
| CCTAAGATGTTACTCCGCAA+AGG | - | chr3_1:83755762-83755781 | Msa0381520:intron | 45.0% | |
| GCAGAATCGCAATAGCGTAT+CGG | + | chr3_1:83755888-83755907 | None:intergenic | 45.0% | |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | + | chr3_1:83756032-83756051 | None:intergenic | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | + | chr3_1:83756033-83756052 | None:intergenic | 45.0% |
| TGAGAGGTTACCTAGGTAGT+GGG | + | chr3_1:83756040-83756059 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | + | chr3_1:83756041-83756060 | None:intergenic | 45.0% | |
| TCAGTGATGAGAGGTTACCT+AGG | + | chr3_1:83756047-83756066 | None:intergenic | 45.0% | |
| ACAGCATAGCGCGATATTAG+CGG | + | chr3_1:83756320-83756339 | None:intergenic | 45.0% | |
| GGCAGCATCCAAATCATGTA+GGG | + | chr3_1:83756631-83756650 | None:intergenic | 45.0% | |
| TGGCAGCATCCAAATCATGT+AGG | + | chr3_1:83756632-83756651 | None:intergenic | 45.0% | |
| AAAATATCTTGCCCCCCTTG+AGG | + | chr3_1:83756663-83756682 | None:intergenic | 45.0% | |
| TCAGTGATTTCCGTCTTCCT+AGG | + | chr3_1:83756711-83756730 | None:intergenic | 45.0% | |
| !! | CTGCTTTAGAATGCCTTACC+AGG | + | chr3_1:83756864-83756883 | None:intergenic | 45.0% |
| CACATAAAGTCTGCCCATTG+TGG | + | chr3_1:83756889-83756908 | None:intergenic | 45.0% | |
| CACAATGGGCAGACTTTATG+TGG | - | chr3_1:83756887-83756906 | Msa0381520:intron | 45.0% | |
| CGTCAATAAACAGAACCCCA+GGG | + | chr3_1:83757229-83757248 | None:intergenic | 45.0% | |
| TCGTCAATAAACAGAACCCC+AGG | + | chr3_1:83757230-83757249 | None:intergenic | 45.0% | |
| TGGGGTTCTGTTTATTGACG+AGG | - | chr3_1:83757229-83757248 | Msa0381520:CDS | 45.0% | |
| ACTGATATGACCAGTCCTCA+TGG | - | chr3_1:83757765-83757784 | Msa0381520:intron | 45.0% | |
| TGGCATACCTGTTGACCTAT+TGG | - | chr3_1:83757785-83757804 | Msa0381520:intron | 45.0% | |
| CGGTCCAGCTGAAATAATTC+AGG | - | chr3_1:83757839-83757858 | Msa0381520:intron | 45.0% | |
| ! | TTAGCTTTCCTTGGGGAGAT+TGG | - | chr3_1:83758008-83758027 | Msa0381520:intron | 45.0% |
| TTGGACAACGGACATCTCTA+AGG | - | chr3_1:83758027-83758046 | Msa0381520:intron | 45.0% | |
| ATTGCGTGTTTGTCCTAGGT+AGG | + | chr3_1:83758451-83758470 | None:intergenic | 45.0% | |
| AAGGATTGCGTGTTTGTCCT+AGG | + | chr3_1:83758455-83758474 | None:intergenic | 45.0% | |
| !! | TAGTATTTATATAAAAAATT+TGG | - | chr3_1:83753537-83753556 | Msa0381520:CDS | 5.0% |
| !! | ATGATAAAAATAATTAAAAT+GGG | + | chr3_1:83757702-83757721 | None:intergenic | 5.0% |
| GGAATCGCTTTCTCTTACGG+CGG | + | chr3_1:83753083-83753102 | None:intergenic | 50.0% | |
| GCCGTAAGAGAAAGCGATTC+CGG | - | chr3_1:83753082-83753101 | Msa0381520:intron | 50.0% | |
| GCCGGAATCGCTTTCTCTTA+CGG | + | chr3_1:83753086-83753105 | None:intergenic | 50.0% | |
| CCATAGAGCACGCAGAATTG+TGG | + | chr3_1:83753638-83753657 | None:intergenic | 50.0% | |
| CCACAATTCTGCGTGCTCTA+TGG | - | chr3_1:83753635-83753654 | Msa0381520:intron | 50.0% | |
| TGGTTTCACCCGCAACAAAC+AGG | + | chr3_1:83754112-83754131 | None:intergenic | 50.0% | |
| CCCACAAACCCAGAAGCAAA+AGG | + | chr3_1:83754252-83754271 | None:intergenic | 50.0% | |
| ATACGCCAGAAGAAGATGGC+TGG | - | chr3_1:83754315-83754334 | Msa0381520:intron | 50.0% | |
| ATGCAGTCTTTCCGGTTCCA+GGG | + | chr3_1:83754365-83754384 | None:intergenic | 50.0% | |
| AATGCAGTCTTTCCGGTTCC+AGG | + | chr3_1:83754366-83754385 | None:intergenic | 50.0% | |
| CTTGGGATATGTCAGGAGCT+TGG | - | chr3_1:83754390-83754409 | Msa0381520:intron | 50.0% | |
| GTAGGTTCCATTCTGCCCAA+TGG | - | chr3_1:83754490-83754509 | Msa0381520:intron | 50.0% | |
| GTTCCATTCTGCCCAATGGT+TGG | - | chr3_1:83754494-83754513 | Msa0381520:intron | 50.0% | |
| GAACCAACCATTGGGCAGAA+TGG | + | chr3_1:83754500-83754519 | None:intergenic | 50.0% | |
| AGTTTCTTCGGGAGAGAGCT+CGG | + | chr3_1:83754766-83754785 | None:intergenic | 50.0% | |
| GGGGTCCAACTTTAGTTGCT+TGG | + | chr3_1:83754859-83754878 | None:intergenic | 50.0% | |
| ! | CCGCACCTTTTCCTTGATCA+AGG | + | chr3_1:83754895-83754914 | None:intergenic | 50.0% |
| GGGATTTATGCACACTGTGC+AGG | - | chr3_1:83755069-83755088 | Msa0381520:intron | 50.0% | |
| GGAGTATGTTCCACTTCCCA+AGG | - | chr3_1:83755192-83755211 | Msa0381520:intron | 50.0% | |
| CTGCTAGACTGCTATGCAGA+TGG | + | chr3_1:83755709-83755728 | None:intergenic | 50.0% | |
| TCTGCATAGCAGTCTAGCAG+AGG | - | chr3_1:83755709-83755728 | Msa0381520:intron | 50.0% | |
| !! | GCTGAGTTGGTGATGAGATG+AGG | - | chr3_1:83755995-83756014 | Msa0381520:intron | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | + | chr3_1:83756031-83756050 | None:intergenic | 50.0% |
| GAGAGGTTACCTAGGTAGTG+GGG | + | chr3_1:83756039-83756058 | None:intergenic | 50.0% | |
| AGAGGAGGTTCAGTGATGAG+AGG | + | chr3_1:83756056-83756075 | None:intergenic | 50.0% | |
| AGTGATGAGAGAAGATGGGG+AGG | + | chr3_1:83756080-83756099 | None:intergenic | 50.0% | |
| TATTAGCGGAAGCCGCAAAG+TGG | + | chr3_1:83756306-83756325 | None:intergenic | 50.0% | |
| TGGGCCAGATGATGAAACCT+AGG | - | chr3_1:83756691-83756710 | Msa0381520:CDS | 50.0% | |
| GTGTTGCAGAACTTGTCCCT+GGG | - | chr3_1:83757210-83757229 | Msa0381520:CDS | 50.0% | |
| TGTTGCAGAACTTGTCCCTG+GGG | - | chr3_1:83757211-83757230 | Msa0381520:CDS | 50.0% | |
| AACAGGTATGCCATGAGGAC+TGG | + | chr3_1:83757778-83757797 | None:intergenic | 50.0% | |
| AGGTCAACAGGTATGCCATG+AGG | + | chr3_1:83757783-83757802 | None:intergenic | 50.0% | |
| TCTAGCTATCCGAGCTCAAG+TGG | - | chr3_1:83757959-83757978 | Msa0381520:intron | 50.0% | |
| CAAGTTCCTCCACTTGAGCT+CGG | + | chr3_1:83757971-83757990 | None:intergenic | 50.0% | |
| !! | TCAAGTGGAGGAACTTGCTG+TGG | - | chr3_1:83757974-83757993 | Msa0381520:intron | 50.0% |
| TCCTTGGGGAGATTGGACAA+CGG | - | chr3_1:83758015-83758034 | Msa0381520:intron | 50.0% | |
| TGGCAGAGACAACATCTGCA+AGG | - | chr3_1:83758172-83758191 | Msa0381520:intron | 50.0% | |
| TTGCTGCTCTTGGAGAAGCT+TGG | + | chr3_1:83758334-83758353 | None:intergenic | 50.0% | |
| GCAGCAATTAGGCACTTCCA+AGG | + | chr3_1:83758495-83758514 | None:intergenic | 50.0% | |
| ! | GCGGTAGCGGCTAGGTTTAA+GGG | + | chr3_1:83753064-83753083 | None:intergenic | 55.0% |
| GCTTTCTCTTACGGCGGTAG+CGG | + | chr3_1:83753077-83753096 | None:intergenic | 55.0% | |
| TGGGTTTGTGGGACAAGCTG+AGG | - | chr3_1:83754260-83754279 | Msa0381520:intron | 55.0% | |
| ! | AAGAGAAGCGTGTGGCCTTG+TGG | - | chr3_1:83754284-83754303 | Msa0381520:intron | 55.0% |
| GGCGTATCATGTCGACCACA+AGG | + | chr3_1:83754302-83754321 | None:intergenic | 55.0% | |
| CCTTGCCAGCCATCTTCTTC+TGG | + | chr3_1:83754323-83754342 | None:intergenic | 55.0% | |
| CCAGAAGAAGATGGCTGGCA+AGG | - | chr3_1:83754320-83754339 | Msa0381520:intron | 55.0% | |
| TGCAGTCTTTCCGGTTCCAG+GGG | + | chr3_1:83754364-83754383 | None:intergenic | 55.0% | |
| ATGTCAGGAGCTTGGGACCA+AGG | - | chr3_1:83754398-83754417 | Msa0381520:intron | 55.0% | |
| CACACTGTGCAGGTAGCTGT+CGG | - | chr3_1:83755079-83755098 | Msa0381520:intron | 55.0% | |
| ACACTGTGCAGGTAGCTGTC+GGG | - | chr3_1:83755080-83755099 | Msa0381520:intron | 55.0% | |
| AGTGGGGCTGTGAAAAGGGT+TGG | - | chr3_1:83755127-83755146 | Msa0381520:intron | 55.0% | |
| TGTTCCACTTCCCAAGGGAG+AGG | - | chr3_1:83755198-83755217 | Msa0381520:intron | 55.0% | |
| TGAACCTCTCCCTTGGGAAG+TGG | + | chr3_1:83755205-83755224 | None:intergenic | 55.0% | |
| ACCCCTAAACCCCACTACCT+AGG | - | chr3_1:83756027-83756046 | Msa0381520:intron | 55.0% | |
| ! | GGTGTTGCAGAACTTGTCCC+TGG | - | chr3_1:83757209-83757228 | Msa0381520:CDS | 55.0% |
| AGCTATCCGAGCTCAAGTGG+AGG | - | chr3_1:83757962-83757981 | Msa0381520:intron | 55.0% | |
| TCCGTTGTCCAATCTCCCCA+AGG | + | chr3_1:83758019-83758038 | None:intergenic | 55.0% | |
| ATCTTGGCAACAACGCTCGC+AGG | + | chr3_1:83758149-83758168 | None:intergenic | 55.0% | |
| ! | GGCGGTAGCGGCTAGGTTTA+AGG | + | chr3_1:83753065-83753084 | None:intergenic | 60.0% |
| ACGGAACCCTCTCAGCTCAC+TGG | - | chr3_1:83753132-83753151 | Msa0381520:three_prime_UTR | 60.0% | |
| CGCTGTCCAGTGAGCTGAGA+GGG | + | chr3_1:83753141-83753160 | None:intergenic | 60.0% | |
| TCGCTGTCCAGTGAGCTGAG+AGG | + | chr3_1:83753142-83753161 | None:intergenic | 60.0% | |
| ! | GCTGAGGCAAGAGAAGCGTG+TGG | - | chr3_1:83754276-83754295 | Msa0381520:intron | 60.0% |
| GCAGTCTTTCCGGTTCCAGG+GGG | + | chr3_1:83754363-83754382 | None:intergenic | 60.0% | |
| AGAGCTCGGTCACCTTGCAC+AGG | + | chr3_1:83754752-83754771 | None:intergenic | 60.0% | |
| CACTGTGCAGGTAGCTGTCG+GGG | - | chr3_1:83755081-83755100 | Msa0381520:intron | 60.0% | |
| AGAAGATGGGGAGGCAGAGG+AGG | + | chr3_1:83756071-83756090 | None:intergenic | 60.0% | |
| GAGAGAAGATGGGGAGGCAG+AGG | + | chr3_1:83756074-83756093 | None:intergenic | 60.0% | |
| ! | CTCTTACGGCGGTAGCGGCT+AGG | + | chr3_1:83753072-83753091 | None:intergenic | 65.0% |
| GGGTTCCGTGAGTGCACCGT+CGG | + | chr3_1:83753121-83753140 | None:intergenic | 65.0% | |
| ! | GGCAAGGCACTCCTTCTCGC+CGG | - | chr3_1:83754336-83754355 | Msa0381520:CDS | 65.0% |
| ! | GCAAGGCACTCCTTCTCGCC+GGG | - | chr3_1:83754337-83754356 | Msa0381520:CDS | 65.0% |
| CTGCCAACGCGCGACCTCAA+GGG | - | chr3_1:83756646-83756665 | Msa0381520:intron | 65.0% | |
| TGCCAACGCGCGACCTCAAG+GGG | - | chr3_1:83756647-83756666 | Msa0381520:intron | 65.0% | |
| ! | CGTCGGCGAGCTCTTGGTGC+CGG | + | chr3_1:83753104-83753123 | None:intergenic | 70.0% |
| CGGCACCAAGAGCTCGCCGA+CGG | - | chr3_1:83753102-83753121 | Msa0381520:intron | 70.0% | |
| GTGCACCGTCGGCGAGCTCT+TGG | + | chr3_1:83753110-83753129 | None:intergenic | 70.0% | |
| GCTCGCCGACGGTGCACTCA+CGG | - | chr3_1:83753113-83753132 | Msa0381520:intron | 70.0% | |
| CTTTCCGGTTCCAGGGGGCC+CGG | + | chr3_1:83754358-83754377 | None:intergenic | 70.0% | |
| GCTGCCAACGCGCGACCTCA+AGG | - | chr3_1:83756645-83756664 | Msa0381520:intron | 70.0% | |
| GCCAACGCGCGACCTCAAGG+GGG | - | chr3_1:83756648-83756667 | Msa0381520:intron | 70.0% | |
| CCAACGCGCGACCTCAAGGG+GGG | - | chr3_1:83756649-83756668 | Msa0381520:intron | 70.0% | |
| TTCCAGGGGGCCCGGCGAGA+AGG | + | chr3_1:83754350-83754369 | None:intergenic | 75.0% | |
| CCCCCCTTGAGGTCGCGCGT+TGG | + | chr3_1:83756652-83756671 | None:intergenic | 75.0% | |
| ! | CTCCTTCTCGCCGGGCCCCC+TGG | - | chr3_1:83754345-83754364 | Msa0381520:CDS | 80.0% |
| ! | CTCGCCGGGCCCCCTGGAAC+CGG | - | chr3_1:83754351-83754370 | Msa0381520:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 83752998 | 83758583 | 83752998 | ID=Msa0381520;Name=Msa0381520 |
| chr3_1 | mRNA | 83752998 | 83758583 | 83752998 | ID=Msa0381520-mRNA-1;Parent=Msa0381520;Name=Msa0381520-mRNA-1;_AED=0.15;_eAED=0.15;_QI=239|1|1|1|0.84|0.71|14|176|458 |
| chr3_1 | exon | 83752998 | 83753090 | 83752998 | ID=Msa0381520-mRNA-1:exon:21613;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83753127 | 83753299 | 83753127 | ID=Msa0381520-mRNA-1:exon:21612;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83753388 | 83753457 | 83753388 | ID=Msa0381520-mRNA-1:exon:21611;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83753533 | 83753624 | 83753533 | ID=Msa0381520-mRNA-1:exon:21610;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83753721 | 83753820 | 83753721 | ID=Msa0381520-mRNA-1:exon:21609;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83754141 | 83754247 | 83754141 | ID=Msa0381520-mRNA-1:exon:21608;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83754331 | 83754396 | 83754331 | ID=Msa0381520-mRNA-1:exon:21607;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83754826 | 83754960 | 83754826 | ID=Msa0381520-mRNA-1:exon:21606;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83756335 | 83756490 | 83756335 | ID=Msa0381520-mRNA-1:exon:21605;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83756673 | 83756822 | 83756673 | ID=Msa0381520-mRNA-1:exon:21604;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83756956 | 83757087 | 83756956 | ID=Msa0381520-mRNA-1:exon:21603;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83757162 | 83757350 | 83757162 | ID=Msa0381520-mRNA-1:exon:21602;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83757593 | 83757725 | 83757593 | ID=Msa0381520-mRNA-1:exon:21601;Parent=Msa0381520-mRNA-1 |
| chr3_1 | exon | 83758388 | 83758583 | 83758388 | ID=Msa0381520-mRNA-1:exon:21600;Parent=Msa0381520-mRNA-1 |
| chr3_1 | five_prime_UTR | 83758388 | 83758583 | 83758388 | ID=Msa0381520-mRNA-1:five_prime_utr;Parent=Msa0381520-mRNA-1 |
| chr3_1 | five_prime_UTR | 83757683 | 83757725 | 83757683 | ID=Msa0381520-mRNA-1:five_prime_utr;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83757593 | 83757682 | 83757593 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83757162 | 83757350 | 83757162 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83756956 | 83757087 | 83756956 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83756673 | 83756822 | 83756673 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83756335 | 83756490 | 83756335 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83754826 | 83754960 | 83754826 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83754331 | 83754396 | 83754331 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83754141 | 83754247 | 83754141 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83753721 | 83753820 | 83753721 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83753533 | 83753624 | 83753533 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83753388 | 83753457 | 83753388 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | CDS | 83753210 | 83753299 | 83753210 | ID=Msa0381520-mRNA-1:cds;Parent=Msa0381520-mRNA-1 |
| chr3_1 | three_prime_UTR | 83753127 | 83753209 | 83753127 | ID=Msa0381520-mRNA-1:three_prime_utr;Parent=Msa0381520-mRNA-1 |
| chr3_1 | three_prime_UTR | 83752998 | 83753090 | 83752998 | ID=Msa0381520-mRNA-1:three_prime_utr;Parent=Msa0381520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
