Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140600 | XP_003603117.1 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140600 | sp|Q9FMR9|RIN1_ARATH | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140600 | G7J7J7 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041490 | Msa0140600 | 0.801955 | 7.051256e-49 | -8.615850e-47 |
| Msa0081060 | Msa0140600 | 0.805923 | 1.055996e-49 | -8.615850e-47 |
| Msa0140600 | Msa0381520 | 0.977709 | 2.517232e-144 | -8.615850e-47 |
| Msa0140600 | Msa0520000 | 0.982193 | 1.816283e-154 | -8.615850e-47 |
| Msa0140600 | Msa0532160 | 0.810296 | 1.237197e-50 | -8.615850e-47 |
| Msa0140600 | Msa1119100 | 0.800658 | 1.299544e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140600 | MtrunA17_Chr3g0135461 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| Msa0140600 | MtrunA17_Chr6g0459171 | 85.714 | 238 | 11 | 2 | 4 | 239 | 1 | 217 | 6.73e-135 | 387 |
| Msa0140600 | MtrunA17_Chr3g0103451 | 44.421 | 466 | 232 | 7 | 1 | 457 | 1 | 448 | 1.29e-120 | 360 |
| Msa0140600 | MtrunA17_Chr6g0459181 | 80.909 | 220 | 7 | 1 | 239 | 458 | 25 | 209 | 1.66e-119 | 347 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140600 | AT5G22330.1 | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| Msa0140600 | AT3G49830.1 | 42.048 | 459 | 254 | 5 | 1 | 457 | 1 | 449 | 3.64e-120 | 359 |
| Msa0140600 | AT5G67630.1 | 43.777 | 466 | 235 | 7 | 1 | 457 | 1 | 448 | 1.54e-119 | 358 |
Find 157 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTTGTTCACTTTATT+TGG | 0.114144 | 1_3:+74834637 | Msa0140600:CDS |
| GGCGGTAGCGGCTAGGTTTA+AGG | 0.154661 | 1_3:-74829442 | None:intergenic |
| CCTTGCCAGCCATCTTCTTC+TGG | 0.261287 | 1_3:-74830700 | None:intergenic |
| GGCTATCGGTCTACGTATTA+AGG | 0.266184 | 1_3:+74830957 | Msa0140600:CDS |
| GCTACTCACACTCACATTAA+AGG | 0.267682 | 1_3:+74830333 | Msa0140600:CDS |
| AGTATCAGCCATGTGATAAT+TGG | 0.271135 | 1_3:+74831190 | Msa0140600:CDS |
| AATGCAGTCTTTCCGGTTCC+AGG | 0.283045 | 1_3:-74830743 | None:intergenic |
| TGGCATACCTGTTGACCTAT+TGG | 0.318630 | 1_3:+74834129 | Msa0140600:CDS |
| TGTTATACTCTCAGTTTCTT+CGG | 0.319337 | 1_3:-74831152 | None:intergenic |
| AAGTGCTAATGCAGTCTTTC+CGG | 0.320842 | 1_3:-74830750 | None:intergenic |
| TCTACGTATTAAGGAAAATA+AGG | 0.329275 | 1_3:+74830966 | Msa0140600:CDS |
| AAAGAAGACCGAGGTTCTTA+TGG | 0.330990 | 1_3:+74830921 | Msa0140600:CDS |
| GGATGTAACCCTACATGATT+TGG | 0.331586 | 1_3:+74832964 | Msa0140600:intron |
| TTTGTGGCAAAGATTACTAT+TGG | 0.345084 | 1_3:-74833741 | None:intergenic |
| GTTATACTCTCAGTTTCTTC+GGG | 0.346912 | 1_3:-74831151 | None:intergenic |
| TTAGCTTTCCTTGGGGAGAT+TGG | 0.351825 | 1_3:+74834352 | Msa0140600:CDS |
| CGGTCCAGCTGAAATAATTC+AGG | 0.353377 | 1_3:+74834183 | Msa0140600:CDS |
| TCTTCCTAGGTTTCATCATC+TGG | 0.372923 | 1_3:-74833039 | None:intergenic |
| GTTGTCTCTGCCATTTATCT+TGG | 0.373972 | 1_3:-74834506 | None:intergenic |
| ACGTCTACAACATGCTCAAT+AGG | 0.374968 | 1_3:-74834863 | None:intergenic |
| GTTGAGACAAGAAATTAATA+AGG | 0.382068 | 1_3:+74833078 | Msa0140600:CDS |
| GGGGTCCAACTTTAGTTGCT+TGG | 0.386390 | 1_3:-74831233 | None:intergenic |
| AGCGTTGTTGCCAAGATAAA+TGG | 0.390480 | 1_3:+74834496 | Msa0140600:CDS |
| GCCGTAAGAGAAAGCGATTC+CGG | 0.392302 | 1_3:+74829462 | Msa0140600:five_prime_UTR |
| GAGGAAAGTTTAGCTTTCCT+TGG | 0.401642 | 1_3:+74834343 | Msa0140600:CDS |
| TTTCTTGTGAACCTCTCCCT+TGG | 0.403331 | 1_3:-74831586 | None:intergenic |
| CAATAGGAAATGCAGCAATT+AGG | 0.406014 | 1_3:-74834847 | None:intergenic |
| GTGCACCGTCGGCGAGCTCT+TGG | 0.411404 | 1_3:-74829487 | None:intergenic |
| AGGAAAGTTTAGCTTTCCTT+GGG | 0.411802 | 1_3:+74834344 | Msa0140600:CDS |
| GCCGGAATCGCTTTCTCTTA+CGG | 0.414767 | 1_3:-74829463 | None:intergenic |
| TTGGGATATGTCAGGAGCTT+GGG | 0.414954 | 1_3:+74830771 | Msa0140600:CDS |
| TCTCCATCTCTTTCTAGATA+AGG | 0.416271 | 1_3:-74830263 | None:intergenic |
| AGTGCATATTCCTCTATTTG+TGG | 0.417327 | 1_3:-74833757 | None:intergenic |
| GGCAAGGCACTCCTTCTCGC+CGG | 0.423804 | 1_3:+74830716 | Msa0140600:CDS |
| GCAAGGCACTCCTTCTCGCC+GGG | 0.424279 | 1_3:+74830717 | Msa0140600:CDS |
| TTCTTGTGAACCTCTCCCTT+GGG | 0.424676 | 1_3:-74831585 | None:intergenic |
| GAAGAAACTGAGAGTATAAC+AGG | 0.425557 | 1_3:+74831154 | Msa0140600:CDS |
| CTCTTACGGCGGTAGCGGCT+AGG | 0.426214 | 1_3:-74829449 | None:intergenic |
| TTTACCTGAATTATTTCAGC+TGG | 0.429224 | 1_3:-74834187 | None:intergenic |
| CAAATAGTGGGGCTGTGAAA+AGG | 0.431610 | 1_3:+74831499 | Msa0140600:CDS |
| GCGGTAGCGGCTAGGTTTAA+GGG | 0.434408 | 1_3:-74829441 | None:intergenic |
| ACAGGTGCATATGCTAGATA+TGG | 0.434605 | 1_3:+74833674 | Msa0140600:intron |
| CAACACCTTCATCGATATAT+CGG | 0.435831 | 1_3:-74833537 | None:intergenic |
| GGTGTTGCAGAACTTGTCCC+TGG | 0.444117 | 1_3:+74833553 | Msa0140600:CDS |
| AATCGATCCAATAGGTCAAC+AGG | 0.450490 | 1_3:-74834136 | None:intergenic |
| TCAGTGATTTCCGTCTTCCT+AGG | 0.453246 | 1_3:-74833052 | None:intergenic |
| GAGAGTATAACAGGAGGTTA+TGG | 0.453991 | 1_3:+74831163 | Msa0140600:CDS |
| CTCTAAAGCACGATTAAGAT+AGG | 0.457106 | 1_3:-74833706 | None:intergenic |
| ATTGCTGTAGCTACTTCATC+AGG | 0.460412 | 1_3:+74829552 | Msa0140600:five_prime_UTR |
| CGCTGTCCAGTGAGCTGAGA+GGG | 0.460788 | 1_3:-74829518 | None:intergenic |
| GTAATCTTTGCCACAAATAG+AGG | 0.461084 | 1_3:+74833747 | Msa0140600:CDS |
| ACACTGTGCAGGTAGCTGTC+GGG | 0.466455 | 1_3:+74831457 | Msa0140600:intron |
| TTGCTGCTCTTGGAGAAGCT+TGG | 0.474441 | 1_3:-74834675 | None:intergenic |
| GCTGCCAACGCGCGACCTCA+AGG | 0.479841 | 1_3:+74832989 | Msa0140600:CDS |
| GAACATACTCCTCAGCTTCA+AGG | 0.485334 | 1_3:-74831557 | None:intergenic |
| GTAGGTTCCATTCTGCCCAA+TGG | 0.486511 | 1_3:+74830870 | Msa0140600:intron |
| TGATCACCAATCGATCCAAT+AGG | 0.490658 | 1_3:-74834144 | None:intergenic |
| TGAACCTCTCCCTTGGGAAG+TGG | 0.494094 | 1_3:-74831579 | None:intergenic |
| ATGCAGTCTTTCCGGTTCCA+GGG | 0.495649 | 1_3:-74830742 | None:intergenic |
| TTGAGCATGTTGTAGACGTA+AGG | 0.496878 | 1_3:+74834867 | Msa0140600:three_prime_UTR |
| TTGGACAACGGACATCTCTA+AGG | 0.496930 | 1_3:+74834371 | Msa0140600:CDS |
| TGATGCCTTGATCAAGGAAA+AGG | 0.497216 | 1_3:+74831264 | Msa0140600:CDS |
| CATTAAAGGCCTAGGTCTTG+AGG | 0.497845 | 1_3:+74830347 | Msa0140600:CDS |
| AGGAACCAAGCAACTAAAGT+TGG | 0.499343 | 1_3:+74831228 | Msa0140600:CDS |
| CGTCGGCGAGCTCTTGGTGC+CGG | 0.499869 | 1_3:-74829481 | None:intergenic |
| ATATATATTGAGGCAAATAG+TGG | 0.501344 | 1_3:+74831486 | Msa0140600:CDS |
| AAATAGTGGGGCTGTGAAAA+GGG | 0.503086 | 1_3:+74831500 | Msa0140600:CDS |
| GTGTTGCAGAACTTGTCCCT+GGG | 0.505714 | 1_3:+74833554 | Msa0140600:CDS |
| ACGGAACCCTCTCAGCTCAC+TGG | 0.509311 | 1_3:+74829512 | Msa0140600:five_prime_UTR |
| TGCCAACGCGCGACCTCAAG+GGG | 0.510126 | 1_3:+74832991 | Msa0140600:CDS |
| CTGCCAACGCGCGACCTCAA+GGG | 0.511088 | 1_3:+74832990 | Msa0140600:CDS |
| GATATATGATGCCTTGATCA+AGG | 0.512614 | 1_3:+74831258 | Msa0140600:CDS |
| AGTTTCTTCGGGAGAGAGCT+CGG | 0.512821 | 1_3:-74831140 | None:intergenic |
| GTTCCATTCTGCCCAATGGT+TGG | 0.513570 | 1_3:+74830874 | Msa0140600:CDS |
| CTTGGGATATGTCAGGAGCT+TGG | 0.517088 | 1_3:+74830770 | Msa0140600:CDS |
| AACAGGTATGCCATGAGGAC+TGG | 0.517649 | 1_3:-74834119 | None:intergenic |
| GAAAATAAGGAAGTATATGA+AGG | 0.518525 | 1_3:+74830979 | Msa0140600:CDS |
| TATATATTGAGGCAAATAGT+GGG | 0.524529 | 1_3:+74831487 | Msa0140600:CDS |
| ATTAGCACTTGGGATATGTC+AGG | 0.527405 | 1_3:+74830763 | Msa0140600:CDS |
| ATAGAGGAATATGCACTGTA+AGG | 0.528143 | 1_3:+74833763 | Msa0140600:CDS |
| CCCACAAACCCAGAAGCAAA+AGG | 0.531554 | 1_3:-74830629 | None:intergenic |
| GAACCAACCATTGGGCAGAA+TGG | 0.533082 | 1_3:-74830877 | None:intergenic |
| ATACTTCTGAACCAACCATT+GGG | 0.533730 | 1_3:-74830885 | None:intergenic |
| CACACTGTGCAGGTAGCTGT+CGG | 0.538379 | 1_3:+74831456 | Msa0140600:intron |
| TGGGTTTGTGGGACAAGCTG+AGG | 0.538586 | 1_3:+74830640 | Msa0140600:CDS |
| ATCTTGGCAACAACGCTCGC+AGG | 0.542251 | 1_3:-74834490 | None:intergenic |
| CGGGGATGTTATATATATTG+AGG | 0.543594 | 1_3:+74831476 | Msa0140600:CDS |
| GGAAAGACTGCATTAGCACT+TGG | 0.544549 | 1_3:+74830752 | Msa0140600:CDS |
| GGAGAAGATGAAAATTGAAG+AGG | 0.545555 | 1_3:+74830281 | Msa0140600:CDS |
| ATCAAGGCATCATATATCGT+GGG | 0.547921 | 1_3:-74831253 | None:intergenic |
| CCAGAAGAAGATGGCTGGCA+AGG | 0.548161 | 1_3:+74830700 | Msa0140600:CDS |
| GCTCGCCGACGGTGCACTCA+CGG | 0.549829 | 1_3:+74829493 | Msa0140600:five_prime_UTR |
| TGCAGTCTTTCCGGTTCCAG+GGG | 0.550380 | 1_3:-74830741 | None:intergenic |
| AAACCTTATCTAGAAAGAGA+TGG | 0.551090 | 1_3:+74830260 | Msa0140600:exon |
| AACAAAACGAGAAAGAAGAG+AGG | 0.553707 | 1_3:-74829375 | None:intergenic |
| TATACTTCTGAACCAACCAT+TGG | 0.554977 | 1_3:-74830886 | None:intergenic |
| GTCAACCGATATATCGATGA+AGG | 0.558745 | 1_3:+74833532 | Msa0140600:CDS |
| ATGGAAATAGTTTCCTACCT+AGG | 0.560067 | 1_3:+74834779 | Msa0140600:three_prime_UTR |
| TGTTGACCTATTGGATCGAT+TGG | 0.564185 | 1_3:+74834138 | Msa0140600:CDS |
| ATGTCAGGAGCTTGGGACCA+AGG | 0.564237 | 1_3:+74830778 | Msa0140600:CDS |
| CATGATACGCCAGAAGAAGA+TGG | 0.565068 | 1_3:+74830691 | Msa0140600:CDS |
| TCGTCAATAAACAGAACCCC+AGG | 0.567100 | 1_3:-74833571 | None:intergenic |
| ATTGGATTGAAGACAGTGAA+AGG | 0.567859 | 1_3:+74831208 | Msa0140600:CDS |
| CAAGTTCCTCCACTTGAGCT+CGG | 0.568699 | 1_3:-74834312 | None:intergenic |
| TGGCAGCATCCAAATCATGT+AGG | 0.570363 | 1_3:-74832973 | None:intergenic |
| TGGGGTTCTGTTTATTGACG+AGG | 0.574623 | 1_3:+74833573 | Msa0140600:CDS |
| ACTGATATGACCAGTCCTCA+TGG | 0.575171 | 1_3:+74834109 | Msa0140600:CDS |
| GGCAGCATCCAAATCATGTA+GGG | 0.577366 | 1_3:-74832972 | None:intergenic |
| AATTATTTCAGCTGGACCGT+AGG | 0.577744 | 1_3:-74834179 | None:intergenic |
| TGTTCCACTTCCCAAGGGAG+AGG | 0.578685 | 1_3:+74831575 | Msa0140600:CDS |
| GGAGGAACTTGCTGTGGATG+AGG | 0.580534 | 1_3:+74834324 | Msa0140600:CDS |
| CACTGTGCAGGTAGCTGTCG+GGG | 0.583392 | 1_3:+74831458 | Msa0140600:intron |
| ATACGCCAGAAGAAGATGGC+TGG | 0.584035 | 1_3:+74830695 | Msa0140600:CDS |
| GCTTTCTCTTACGGCGGTAG+CGG | 0.584795 | 1_3:-74829454 | None:intergenic |
| AAGAGAAGCGTGTGGCCTTG+TGG | 0.587053 | 1_3:+74830664 | Msa0140600:CDS |
| GAAAGACTGCATTAGCACTT+GGG | 0.592181 | 1_3:+74830753 | Msa0140600:CDS |
| TGAGTTTGACCTTGAAGCTG+AGG | 0.593567 | 1_3:+74831548 | Msa0140600:CDS |
| AGTGGGGCTGTGAAAAGGGT+TGG | 0.593627 | 1_3:+74831504 | Msa0140600:CDS |
| GGAGTATGTTCCACTTCCCA+AGG | 0.593628 | 1_3:+74831569 | Msa0140600:CDS |
| CACACTCACATTAAAGGCCT+AGG | 0.594901 | 1_3:+74830339 | Msa0140600:CDS |
| TCTAGCTATCCGAGCTCAAG+TGG | 0.596118 | 1_3:+74834303 | Msa0140600:CDS |
| GGAATCGCTTTCTCTTACGG+CGG | 0.600440 | 1_3:-74829460 | None:intergenic |
| GGGTTCCGTGAGTGCACCGT+CGG | 0.602677 | 1_3:-74829498 | None:intergenic |
| TGGGCCAGATGATGAAACCT+AGG | 0.605557 | 1_3:+74833035 | Msa0140600:CDS |
| GATCAAGGCATCATATATCG+TGG | 0.609216 | 1_3:-74831254 | None:intergenic |
| GATGATGAAACCTAGGAAGA+CGG | 0.610580 | 1_3:+74833042 | Msa0140600:CDS |
| TGAGCATGTTGTAGACGTAA+GGG | 0.610868 | 1_3:+74834868 | Msa0140600:three_prime_UTR |
| ATCATTCGAACACAAACCTA+CGG | 0.612451 | 1_3:+74834163 | Msa0140600:CDS |
| GAGAACAAACCTCAAGACCT+AGG | 0.613415 | 1_3:-74830356 | None:intergenic |
| GGCGTATCATGTCGACCACA+AGG | 0.614191 | 1_3:-74830679 | None:intergenic |
| TAAGGAAGTATATGAAGGCG+AGG | 0.615764 | 1_3:+74830984 | Msa0140600:CDS |
| GCAGCAATTAGGCACTTCCA+AGG | 0.619171 | 1_3:-74834836 | None:intergenic |
| TCAAGTGGAGGAACTTGCTG+TGG | 0.623698 | 1_3:+74834318 | Msa0140600:CDS |
| CCAACGCGCGACCTCAAGGG+GGG | 0.640330 | 1_3:+74832993 | Msa0140600:CDS |
| TCCGTTGTCCAATCTCCCCA+AGG | 0.641969 | 1_3:-74834360 | None:intergenic |
| CGGCACCAAGAGCTCGCCGA+CGG | 0.642680 | 1_3:+74829482 | Msa0140600:five_prime_UTR |
| TGTTGCAGAACTTGTCCCTG+GGG | 0.644580 | 1_3:+74833555 | Msa0140600:CDS |
| AGCTATCCGAGCTCAAGTGG+AGG | 0.646357 | 1_3:+74834306 | Msa0140600:CDS |
| CAGTAGCAAAAGCATCACTT+CGG | 0.650349 | 1_3:-74831527 | None:intergenic |
| GCCAACGCGCGACCTCAAGG+GGG | 0.651411 | 1_3:+74832992 | Msa0140600:CDS |
| TCTTCAATCCAATTATCACA+TGG | 0.652745 | 1_3:-74831198 | None:intergenic |
| TGGCAGAGACAACATCTGCA+AGG | 0.661224 | 1_3:+74834516 | Msa0140600:CDS |
| TGATGAAGTAGCTACAGCAA+TGG | 0.666224 | 1_3:-74829550 | None:intergenic |
| TCCTTGGGGAGATTGGACAA+CGG | 0.674974 | 1_3:+74834359 | Msa0140600:CDS |
| TGGTTCAGAAGTATACTCAA+CGG | 0.677153 | 1_3:+74830894 | Msa0140600:CDS |
| GAGTATGTTCCACTTCCCAA+GGG | 0.680518 | 1_3:+74831570 | Msa0140600:CDS |
| GCAGTCTTTCCGGTTCCAGG+GGG | 0.687329 | 1_3:-74830740 | None:intergenic |
| ATATATTGAGGCAAATAGTG+GGG | 0.693226 | 1_3:+74831488 | Msa0140600:CDS |
| GGAAAGTTTAGCTTTCCTTG+GGG | 0.696347 | 1_3:+74834345 | Msa0140600:CDS |
| TCAAGGCATCATATATCGTG+GGG | 0.702794 | 1_3:-74831252 | None:intergenic |
| CGTCAATAAACAGAACCCCA+GGG | 0.715606 | 1_3:-74833570 | None:intergenic |
| TCGCTGTCCAGTGAGCTGAG+AGG | 0.721210 | 1_3:-74829519 | None:intergenic |
| ATTCACAGAAGACTATAACA+AGG | 0.722051 | 1_3:-74834902 | None:intergenic |
| GCTGAGGCAAGAGAAGCGTG+TGG | 0.722369 | 1_3:+74830656 | Msa0140600:CDS |
| GAAACTGAGAGTATAACAGG+AGG | 0.727490 | 1_3:+74831157 | Msa0140600:CDS |
| AGGTCAACAGGTATGCCATG+AGG | 0.729642 | 1_3:-74834124 | None:intergenic |
| AACGGAAGTAAAGAAGACCG+AGG | 0.771401 | 1_3:+74830912 | Msa0140600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTATACTTTTATT+TGG | + | chr1_3:74831348-74831367 | Msa0140600:intron | 10.0% |
| !!! | TTTGTTTTATACTTTTATTT+GGG | + | chr1_3:74831349-74831368 | Msa0140600:intron | 10.0% |
| !!! | TTTTAAATCTATACAAATAT+TGG | + | chr1_3:74831395-74831414 | Msa0140600:intron | 10.0% |
| !! | AAAAAAATAAAATAAAGCTT+AGG | + | chr1_3:74831865-74831884 | Msa0140600:intron | 10.0% |
| !! | TTCATTTATTAAAATGAAAT+TGG | + | chr1_3:74833396-74833415 | Msa0140600:intron | 10.0% |
| !! | CATGATAAAAATAATTAAAA+TGG | - | chr1_3:74834047-74834066 | None:intergenic | 10.0% |
| !! | TAGTAACATTAAAAGAATTA+GGG | - | chr1_3:74830196-74830215 | None:intergenic | 15.0% |
| !! | TTAGTAACATTAAAAGAATT+AGG | - | chr1_3:74830197-74830216 | None:intergenic | 15.0% |
| !! | GAAAAAAACTTATTAAATTG+AGG | - | chr1_3:74830384-74830403 | None:intergenic | 15.0% |
| !!! | TCATTTTTAATTTATGTTTC+TGG | + | chr1_3:74832482-74832501 | Msa0140600:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTCTCAA+AGG | + | chr1_3:74832943-74832962 | Msa0140600:intron | 15.0% |
| !! | TGAATAATAATCATACATGT+TGG | - | chr1_3:74829691-74829710 | None:intergenic | 20.0% |
| !!! | TTGATAGTATTGTGTTTTTT+TGG | + | chr1_3:74830092-74830111 | Msa0140600:intron | 20.0% |
| !!! | TGATAGTATTGTGTTTTTTT+GGG | + | chr1_3:74830093-74830112 | Msa0140600:intron | 20.0% |
| !! | AGTAACATTAAAAGAATTAG+GGG | - | chr1_3:74830195-74830214 | None:intergenic | 20.0% |
| !!! | TAGAATACAAGAATGATTTT+TGG | - | chr1_3:74830811-74830830 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTGATGTGATTT+TGG | + | chr1_3:74831102-74831121 | Msa0140600:intron | 20.0% |
| !!! | ATTCTTTTCTCTTTTTTGAA+AGG | + | chr1_3:74831302-74831321 | Msa0140600:intron | 20.0% |
| !!! | TTTTATACTTTTATTTGGGT+GGG | + | chr1_3:74831353-74831372 | Msa0140600:intron | 20.0% |
| !! | ACATCACATGAATATAATAA+TGG | - | chr1_3:74831643-74831662 | None:intergenic | 20.0% |
| !! | GTAAATTATATTTGAATCCT+TGG | + | chr1_3:74831684-74831703 | Msa0140600:intron | 20.0% |
| !!! | TTTTATTTTTTTCAGAGCTA+AGG | - | chr1_3:74831857-74831876 | None:intergenic | 20.0% |
| !!! | CACTTTTTAAATTTCTGTTT+AGG | + | chr1_3:74832571-74832590 | Msa0140600:intron | 20.0% |
| !! | AAACATTAAGCAAATTTCTA+TGG | + | chr1_3:74832810-74832829 | Msa0140600:intron | 20.0% |
| !! | GTTTAAATAAAATTTGTCAG+AGG | + | chr1_3:74832857-74832876 | Msa0140600:intron | 20.0% |
| !! | TGTTTAATTGTTTAACTAGA+AGG | + | chr1_3:74833124-74833143 | Msa0140600:intron | 20.0% |
| !! | GTTTAATTGTTTAACTAGAA+GGG | + | chr1_3:74833125-74833144 | Msa0140600:intron | 20.0% |
| !! | TTTAATTGTTTAACTAGAAG+GGG | + | chr1_3:74833126-74833145 | Msa0140600:intron | 20.0% |
| !!! | TTATGTTACCTTTTTTCATT+TGG | + | chr1_3:74833281-74833300 | Msa0140600:intron | 20.0% |
| !!! | AATAAATTTTGATTGTCCTT+GGG | + | chr1_3:74833349-74833368 | Msa0140600:intron | 20.0% |
| !! | AAAAGTTTCTTAACACAAAA+TGG | + | chr1_3:74833984-74834003 | Msa0140600:intron | 20.0% |
| !!! | TGAAATTTGTTCACTTTATT+TGG | + | chr1_3:74834637-74834656 | Msa0140600:CDS | 20.0% |
| !!! | TGCTTAGTATTATTTTTGTA+TGG | + | chr1_3:74834760-74834779 | Msa0140600:three_prime_UTR | 20.0% |
| ! | AACAAAACAAACACTTAAAC+TGG | - | chr1_3:74829659-74829678 | None:intergenic | 25.0% |
| ! | TGTGTATATTTAGAAAGATG+AGG | + | chr1_3:74829808-74829827 | Msa0140600:intron | 25.0% |
| ! | GTGTATATTTAGAAAGATGA+GGG | + | chr1_3:74829809-74829828 | Msa0140600:intron | 25.0% |
| !!! | CTTCTGATTTTTAAGTCTTT+AGG | + | chr1_3:74829962-74829981 | Msa0140600:intron | 25.0% |
| !!! | GATAGTATTGTGTTTTTTTG+GGG | + | chr1_3:74830094-74830113 | Msa0140600:intron | 25.0% |
| !!! | ATAGTATTGTGTTTTTTTGG+GGG | + | chr1_3:74830095-74830114 | Msa0140600:intron | 25.0% |
| ! | AAGAAATAAGCAAAAGGATT+TGG | - | chr1_3:74830512-74830531 | None:intergenic | 25.0% |
| ! | ATTTATTTATACCGCTTTGT+AGG | + | chr1_3:74830852-74830871 | Msa0140600:intron | 25.0% |
| !! | AAAATTTTCCATAAGAACCT+CGG | - | chr1_3:74830932-74830951 | None:intergenic | 25.0% |
| !! | TTCTTATGGAAAATTTTCGA+CGG | + | chr1_3:74830935-74830954 | Msa0140600:CDS | 25.0% |
| ! | TCTACGTATTAAGGAAAATA+AGG | + | chr1_3:74830966-74830985 | Msa0140600:CDS | 25.0% |
| !! | GAAAATAAGGAAGTATATGA+AGG | + | chr1_3:74830979-74830998 | Msa0140600:CDS | 25.0% |
| !!! | GTTTTATACTTTTATTTGGG+TGG | + | chr1_3:74831352-74831371 | Msa0140600:intron | 25.0% |
| ! | ATATATATTGAGGCAAATAG+TGG | + | chr1_3:74831486-74831505 | Msa0140600:CDS | 25.0% |
| ! | TATATATTGAGGCAAATAGT+GGG | + | chr1_3:74831487-74831506 | Msa0140600:CDS | 25.0% |
| !!! | GTTTTGTTTGAAGTTGATAA+TGG | + | chr1_3:74831778-74831797 | Msa0140600:intron | 25.0% |
| !!! | AGCTTAGGATATAATTTGTT+TGG | + | chr1_3:74831880-74831899 | Msa0140600:intron | 25.0% |
| !!! | GCTTAGGATATAATTTGTTT+GGG | + | chr1_3:74831881-74831900 | Msa0140600:intron | 25.0% |
| ! | ATTTGTGTATGTATAGAGAA+TGG | + | chr1_3:74831932-74831951 | Msa0140600:intron | 25.0% |
| ! | TATATGTAATAGTGGTATAG+CGG | - | chr1_3:74832183-74832202 | None:intergenic | 25.0% |
| ! | CTATACCACTATTACATATA+GGG | + | chr1_3:74832183-74832202 | Msa0140600:intron | 25.0% |
| !! | AAAATAAAATAGTGCTGAGT+TGG | + | chr1_3:74832326-74832345 | Msa0140600:intron | 25.0% |
| !! | TATTTCTCATATCGGATTTT+TGG | + | chr1_3:74832688-74832707 | Msa0140600:intron | 25.0% |
| ! | AAAACCAGTGTTATAAATAG+CGG | - | chr1_3:74832735-74832754 | None:intergenic | 25.0% |
| ! | TAAATAAAATTTGTCAGAGG+AGG | + | chr1_3:74832860-74832879 | Msa0140600:intron | 25.0% |
| !! | CAAGATATTTTGTCTCTTAT+GGG | + | chr1_3:74833016-74833035 | Msa0140600:CDS | 25.0% |
| ! | GTTGAGACAAGAAATTAATA+AGG | + | chr1_3:74833078-74833097 | Msa0140600:CDS | 25.0% |
| !! | GTTTTCTTCCAAATGAAAAA+AGG | - | chr1_3:74833292-74833311 | None:intergenic | 25.0% |
| ! | AATCTCATTTCTTAGATTGT+TGG | - | chr1_3:74833314-74833333 | None:intergenic | 25.0% |
| !!! | CAATAAATTTTGATTGTCCT+TGG | + | chr1_3:74833348-74833367 | Msa0140600:intron | 25.0% |
| ! | GTTTACAAAAATGCTTATGT+TGG | + | chr1_3:74833500-74833519 | Msa0140600:intron | 25.0% |
| !! | TAAATTGCAGGCTTTAATTA+GGG | - | chr1_3:74833620-74833639 | None:intergenic | 25.0% |
| !! | ATAAATTGCAGGCTTTAATT+AGG | - | chr1_3:74833621-74833640 | None:intergenic | 25.0% |
| ! | AGCATTAGAACTTCATTAAA+TGG | - | chr1_3:74833649-74833668 | None:intergenic | 25.0% |
| ! | ATTAAGACCTCAAAAATGAT+GGG | - | chr1_3:74833874-74833893 | None:intergenic | 25.0% |
| !!! | ATTGACTGTTTTTTTTACAG+AGG | + | chr1_3:74834085-74834104 | Msa0140600:intron | 25.0% |
| !!! | TTGACTGTTTTTTTTACAGA+GGG | + | chr1_3:74834086-74834105 | Msa0140600:intron | 25.0% |
| ! | GAAATAATTCAGGTAAATGA+TGG | + | chr1_3:74834193-74834212 | Msa0140600:intron | 25.0% |
| !!! | TATGTGTTGTTTATCATATC+AGG | + | chr1_3:74834446-74834465 | Msa0140600:intron | 25.0% |
| ! | TAGCAACTCAATTAGTTAAA+GGG | - | chr1_3:74834588-74834607 | None:intergenic | 25.0% |
| !! | CTATTTTCAAACTGTTGAAA+TGG | + | chr1_3:74834718-74834737 | Msa0140600:three_prime_UTR | 25.0% |
| ! | TAAGTCTTTAGGCTTTTTGT+CGG | + | chr1_3:74829973-74829992 | Msa0140600:intron | 30.0% |
| ! | CTCTTTCTAGATAAGGTTTT+CGG | - | chr1_3:74830259-74830278 | None:intergenic | 30.0% |
| AAACCTTATCTAGAAAGAGA+TGG | + | chr1_3:74830260-74830279 | Msa0140600:exon | 30.0% | |
| CTCATTTGGATCTATTGTTA+AGG | - | chr1_3:74830445-74830464 | None:intergenic | 30.0% | |
| CATAGCAAGAAATAAGCAAA+AGG | - | chr1_3:74830518-74830537 | None:intergenic | 30.0% | |
| !!! | GCTAACAACTACTTGTTTTT+TGG | + | chr1_3:74830567-74830586 | Msa0140600:intron | 30.0% |
| !!! | CAACTACTTGTTTTTTGGTT+TGG | + | chr1_3:74830572-74830591 | Msa0140600:intron | 30.0% |
| !! | GTTTGGTTATTGTTTTGTTC+AGG | + | chr1_3:74830589-74830608 | Msa0140600:intron | 30.0% |
| !!! | TGATTTTTGGTACAAAACCT+TGG | - | chr1_3:74830798-74830817 | None:intergenic | 30.0% |
| ! | TCTTATGGAAAATTTTCGAC+GGG | + | chr1_3:74830936-74830955 | Msa0140600:CDS | 30.0% |
| AAAATATGTAGCAGACAAAG+TGG | - | chr1_3:74831074-74831093 | None:intergenic | 30.0% | |
| TGTTATACTCTCAGTTTCTT+CGG | - | chr1_3:74831155-74831174 | None:intergenic | 30.0% | |
| TCTTCAATCCAATTATCACA+TGG | - | chr1_3:74831201-74831220 | None:intergenic | 30.0% | |
| ! | ATTCTACAGCTTTGATACAT+GGG | + | chr1_3:74831426-74831445 | Msa0140600:intron | 30.0% |
| ATATATTGAGGCAAATAGTG+GGG | + | chr1_3:74831488-74831507 | Msa0140600:CDS | 30.0% | |
| CAAGAAAAAAGAGATTGTTC+AGG | + | chr1_3:74831602-74831621 | Msa0140600:CDS | 30.0% | |
| ATGAAACCTGATTCATAGTA+CGG | - | chr1_3:74831717-74831736 | None:intergenic | 30.0% | |
| CATATAGATGATAACAACGT+AGG | + | chr1_3:74831804-74831823 | Msa0140600:intron | 30.0% | |
| !! | AACGTAGGATATAGTTTGTT+TGG | + | chr1_3:74831819-74831838 | Msa0140600:intron | 30.0% |
| !! | ACGTAGGATATAGTTTGTTT+GGG | + | chr1_3:74831820-74831839 | Msa0140600:intron | 30.0% |
| !!! | TATTTTTTTCAGAGCTAAGG+AGG | - | chr1_3:74831854-74831873 | None:intergenic | 30.0% |
| !!! | GGTAACATTTTGATTGTTTC+CGG | + | chr1_3:74831902-74831921 | Msa0140600:intron | 30.0% |
| ACATACACAAATAGTTGTAC+CGG | - | chr1_3:74831924-74831943 | None:intergenic | 30.0% | |
| TGAACTGGAAACAATCAAAA+TGG | - | chr1_3:74831960-74831979 | None:intergenic | 30.0% | |
| ! | TAGAGAATTTAAGCATTGCA+AGG | + | chr1_3:74831996-74832015 | Msa0140600:intron | 30.0% |
| TCTTACAATGGTCAAATATC+AGG | - | chr1_3:74832023-74832042 | None:intergenic | 30.0% | |
| GATGGAAAACTTTCTTACAA+TGG | - | chr1_3:74832035-74832054 | None:intergenic | 30.0% | |
| !!! | ATTTTAATTCAGAGCCTTTG+CGG | - | chr1_3:74832123-74832142 | None:intergenic | 30.0% |
| !! | CAAAGGCTCTGAATTAAAAT+TGG | + | chr1_3:74832123-74832142 | Msa0140600:intron | 30.0% |
| GCTATACCACTATTACATAT+AGG | + | chr1_3:74832182-74832201 | Msa0140600:intron | 30.0% | |
| CAAATCCCTATATGTAATAG+TGG | - | chr1_3:74832191-74832210 | None:intergenic | 30.0% | |
| CACTATTACATATAGGGATT+TGG | + | chr1_3:74832189-74832208 | Msa0140600:intron | 30.0% | |
| AAATCCGATATGAGAAATAG+CGG | - | chr1_3:74832687-74832706 | None:intergenic | 30.0% | |
| ACCTTACTAGAAGAAAAGTA+CGG | - | chr1_3:74832839-74832858 | None:intergenic | 30.0% | |
| !! | GAAAATATTTTTGCAGAGTC+TGG | - | chr1_3:74832887-74832906 | None:intergenic | 30.0% |
| ! | GCAAGATATTTTGTCTCTTA+TGG | + | chr1_3:74833015-74833034 | Msa0140600:CDS | 30.0% |
| ACTAAATAGCATCTTCATGA+TGG | - | chr1_3:74833260-74833279 | None:intergenic | 30.0% | |
| AAGAATAACTATTATGCCCA+AGG | - | chr1_3:74833368-74833387 | None:intergenic | 30.0% | |
| ACTTGTGAACAAAAAAGCAA+AGG | + | chr1_3:74833431-74833450 | Msa0140600:intron | 30.0% | |
| CTTGTGAACAAAAAAGCAAA+GGG | + | chr1_3:74833432-74833451 | Msa0140600:intron | 30.0% | |
| AGCAAAGGGTAAAAAAATGT+AGG | + | chr1_3:74833446-74833465 | Msa0140600:intron | 30.0% | |
| GGAGTGATATAAAAACAAGA+AGG | + | chr1_3:74833467-74833486 | Msa0140600:intron | 30.0% | |
| AAATGGATGCAATAAATTGC+AGG | - | chr1_3:74833632-74833651 | None:intergenic | 30.0% | |
| ! | AAGTTCTAATGCTTCTTTAC+AGG | + | chr1_3:74833656-74833675 | Msa0140600:intron | 30.0% |
| TTTGTGGCAAAGATTACTAT+TGG | - | chr1_3:74833744-74833763 | None:intergenic | 30.0% | |
| ! | TGTATTAAGTTTTGCTGAAG+TGG | + | chr1_3:74833805-74833824 | Msa0140600:intron | 30.0% |
| GATTAAGACCTCAAAAATGA+TGG | - | chr1_3:74833875-74833894 | None:intergenic | 30.0% | |
| ! | TTTGAGGTCTTAATCTTCTT+CGG | + | chr1_3:74833880-74833899 | Msa0140600:intron | 30.0% |
| ! | TGATTTTGCAGTATCTCAAT+GGG | + | chr1_3:74833928-74833947 | Msa0140600:intron | 30.0% |
| ! | TCTCTGTTTTCATGATTAGT+TGG | + | chr1_3:74833956-74833975 | Msa0140600:intron | 30.0% |
| !! | CTCTGTTTTCATGATTAGTT+GGG | + | chr1_3:74833957-74833976 | Msa0140600:intron | 30.0% |
| !! | TCTGTTTTCATGATTAGTTG+GGG | + | chr1_3:74833958-74833977 | Msa0140600:intron | 30.0% |
| TTTACCTGAATTATTTCAGC+TGG | - | chr1_3:74834190-74834209 | None:intergenic | 30.0% | |
| GCTATTTGAAAGAAGGTTAA+GGG | - | chr1_3:74834219-74834238 | None:intergenic | 30.0% | |
| TTGAAAGGCTATTTGAAAGA+AGG | - | chr1_3:74834226-74834245 | None:intergenic | 30.0% | |
| ! | TATGCCAAACATGCTAATTT+TGG | + | chr1_3:74834246-74834265 | Msa0140600:intron | 30.0% |
| ATGCAAATAAGTGTGTATGT+TGG | - | chr1_3:74834277-74834296 | None:intergenic | 30.0% | |
| ACATATAAGTCACATACGAA+AGG | - | chr1_3:74834431-74834450 | None:intergenic | 30.0% | |
| GTAGCAACTCAATTAGTTAA+AGG | - | chr1_3:74834589-74834608 | None:intergenic | 30.0% | |
| !!! | GCTACTGTTTTGAAATTTGT+AGG | + | chr1_3:74834604-74834623 | Msa0140600:intron | 30.0% |
| !!! | ACTGTTTTGAAATTTGTAGG+CGG | + | chr1_3:74834607-74834626 | Msa0140600:intron | 30.0% |
| ATTCACAGAAGACTATAACA+AGG | - | chr1_3:74834905-74834924 | None:intergenic | 30.0% | |
| AGCTTTGCATATGGACATAT+AGG | - | chr1_3:74829883-74829902 | None:intergenic | 35.0% | |
| ! | AAGTCTTTAGGCTTTTTGTC+GGG | + | chr1_3:74829974-74829993 | Msa0140600:intron | 35.0% |
| !!! | GTTTTTTTGGGGGTTTTCTT+AGG | + | chr1_3:74830105-74830124 | Msa0140600:intron | 35.0% |
| ! | TTTCGGTTTTCACTTTGCAA+TGG | - | chr1_3:74830242-74830261 | None:intergenic | 35.0% |
| TCTCCATCTCTTTCTAGATA+AGG | - | chr1_3:74830266-74830285 | None:intergenic | 35.0% | |
| GGAGAAGATGAAAATTGAAG+AGG | + | chr1_3:74830281-74830300 | Msa0140600:CDS | 35.0% | |
| ACACAAAATCTGTGCTCATT+TGG | - | chr1_3:74830459-74830478 | None:intergenic | 35.0% | |
| !! | TATTGTTTTGTTCAGGTCAG+TGG | + | chr1_3:74830596-74830615 | Msa0140600:intron | 35.0% |
| ATACTTCTGAACCAACCATT+GGG | - | chr1_3:74830888-74830907 | None:intergenic | 35.0% | |
| TATACTTCTGAACCAACCAT+TGG | - | chr1_3:74830889-74830908 | None:intergenic | 35.0% | |
| ! | TGGTTCAGAAGTATACTCAA+CGG | + | chr1_3:74830894-74830913 | Msa0140600:CDS | 35.0% |
| TGTGATTCCCTTGTTAAAAC+TGG | + | chr1_3:74831016-74831035 | Msa0140600:intron | 35.0% | |
| GTGATTCCCTTGTTAAAACT+GGG | + | chr1_3:74831017-74831036 | Msa0140600:intron | 35.0% | |
| GTTATACTCTCAGTTTCTTC+GGG | - | chr1_3:74831154-74831173 | None:intergenic | 35.0% | |
| ! | GAAGAAACTGAGAGTATAAC+AGG | + | chr1_3:74831154-74831173 | Msa0140600:CDS | 35.0% |
| AGTATCAGCCATGTGATAAT+TGG | + | chr1_3:74831190-74831209 | Msa0140600:CDS | 35.0% | |
| ATTGGATTGAAGACAGTGAA+AGG | + | chr1_3:74831208-74831227 | Msa0140600:CDS | 35.0% | |
| ! | ATCAAGGCATCATATATCGT+GGG | - | chr1_3:74831256-74831275 | None:intergenic | 35.0% |
| GATATATGATGCCTTGATCA+AGG | + | chr1_3:74831258-74831277 | Msa0140600:CDS | 35.0% | |
| ! | CATTCTACAGCTTTGATACA+TGG | + | chr1_3:74831425-74831444 | Msa0140600:intron | 35.0% |
| CGGGGATGTTATATATATTG+AGG | + | chr1_3:74831476-74831495 | Msa0140600:CDS | 35.0% | |
| GATAAACCGTACTATGAATC+AGG | + | chr1_3:74831708-74831727 | Msa0140600:intron | 35.0% | |
| !! | CGTAGGATATAGTTTGTTTG+GGG | + | chr1_3:74831821-74831840 | Msa0140600:intron | 35.0% |
| GCATACACAAATAGTTGAAC+TGG | - | chr1_3:74831975-74831994 | None:intergenic | 35.0% | |
| AAAAGTCACCACTATTGCAA+TGG | - | chr1_3:74832257-74832276 | None:intergenic | 35.0% | |
| ATGAAGTGATGAGAGAAGAT+GGG | - | chr1_3:74832428-74832447 | None:intergenic | 35.0% | |
| TATGAAGTGATGAGAGAAGA+TGG | - | chr1_3:74832429-74832448 | None:intergenic | 35.0% | |
| CATTTACTTCAACCACTTTG+CGG | + | chr1_3:74832635-74832654 | Msa0140600:intron | 35.0% | |
| !! | GTGTTATAAATAGCGGATTG+CGG | - | chr1_3:74832728-74832747 | None:intergenic | 35.0% |
| CAATCCGCTATTTATAACAC+TGG | + | chr1_3:74832728-74832747 | Msa0140600:intron | 35.0% | |
| ! | TCTTTTCGTGAAAGATGATG+AGG | + | chr1_3:74832786-74832805 | Msa0140600:intron | 35.0% |
| ! | ACCGTACTTTTCTTCTAGTA+AGG | + | chr1_3:74832835-74832854 | Msa0140600:intron | 35.0% |
| !! | TCTAGACACTTGCTATATAC+TGG | + | chr1_3:74832905-74832924 | Msa0140600:intron | 35.0% |
| CAACTCTGACTGATATGTAA+AGG | - | chr1_3:74833154-74833173 | None:intergenic | 35.0% | |
| AGAGTTGTTGTCATGTAATC+AGG | + | chr1_3:74833167-74833186 | Msa0140600:intron | 35.0% | |
| ATAAGTTCAAACACCTGGTA+AGG | + | chr1_3:74833192-74833211 | Msa0140600:intron | 35.0% | |
| !! | AAAATGCTTATGTTGGTGAC+AGG | + | chr1_3:74833507-74833526 | Msa0140600:intron | 35.0% |
| CAACACCTTCATCGATATAT+CGG | - | chr1_3:74833540-74833559 | None:intergenic | 35.0% | |
| !! | CTCTAAAGCACGATTAAGAT+AGG | - | chr1_3:74833709-74833728 | None:intergenic | 35.0% |
| GTAATCTTTGCCACAAATAG+AGG | + | chr1_3:74833747-74833766 | Msa0140600:CDS | 35.0% | |
| AGTGCATATTCCTCTATTTG+TGG | - | chr1_3:74833760-74833779 | None:intergenic | 35.0% | |
| ATAGAGGAATATGCACTGTA+AGG | + | chr1_3:74833763-74833782 | Msa0140600:CDS | 35.0% | |
| CATTGAGATACTGCAAAATC+AGG | - | chr1_3:74833929-74833948 | None:intergenic | 35.0% | |
| ! | CTGATTTTGCAGTATCTCAA+TGG | + | chr1_3:74833927-74833946 | Msa0140600:intron | 35.0% |
| ! | GATTTTGCAGTATCTCAATG+GGG | + | chr1_3:74833929-74833948 | Msa0140600:intron | 35.0% |
| ATCATTCGAACACAAACCTA+CGG | + | chr1_3:74834163-74834182 | Msa0140600:CDS | 35.0% | |
| GGCTATTTGAAAGAAGGTTA+AGG | - | chr1_3:74834220-74834239 | None:intergenic | 35.0% | |
| AGCATGTTTGGCATATTGAA+AGG | - | chr1_3:74834241-74834260 | None:intergenic | 35.0% | |
| GCATCCAAAATTAGCATGTT+TGG | - | chr1_3:74834253-74834272 | None:intergenic | 35.0% | |
| !! | AGGAAAGTTTAGCTTTCCTT+GGG | + | chr1_3:74834344-74834363 | Msa0140600:CDS | 35.0% |
| ! | TGTATTTTTCTTGCTGCTCT+TGG | - | chr1_3:74834688-74834707 | None:intergenic | 35.0% |
| ATGGAAATAGTTTCCTACCT+AGG | + | chr1_3:74834779-74834798 | Msa0140600:three_prime_UTR | 35.0% | |
| GGTCTAACAAAATGGATCAA+AGG | - | chr1_3:74834818-74834837 | None:intergenic | 35.0% | |
| ! | TGATCCATTTTGTTAGACCT+TGG | + | chr1_3:74834819-74834838 | Msa0140600:intron | 35.0% |
| ACTTCCAAGGTCTAACAAAA+TGG | - | chr1_3:74834826-74834845 | None:intergenic | 35.0% | |
| CAATAGGAAATGCAGCAATT+AGG | - | chr1_3:74834850-74834869 | None:intergenic | 35.0% | |
| TGATGAAGTAGCTACAGCAA+TGG | - | chr1_3:74829553-74829572 | None:intergenic | 40.0% | |
| ATTGCTGTAGCTACTTCATC+AGG | + | chr1_3:74829552-74829571 | Msa0140600:five_prime_UTR | 40.0% | |
| ACGTTCATGAGCTTTGCATA+TGG | - | chr1_3:74829892-74829911 | None:intergenic | 40.0% | |
| ! | AGTCTTTAGGCTTTTTGTCG+GGG | + | chr1_3:74829975-74829994 | Msa0140600:intron | 40.0% |
| GGAAACTGAGACACAAAGAT+AGG | - | chr1_3:74830221-74830240 | None:intergenic | 40.0% | |
| GCTACTCACACTCACATTAA+AGG | + | chr1_3:74830333-74830352 | Msa0140600:CDS | 40.0% | |
| ! | TTACACATGCCTGTTTGTTG+CGG | + | chr1_3:74830480-74830499 | Msa0140600:intron | 40.0% |
| ! | AAAGCAGTTCCTTTTGCTTC+TGG | + | chr1_3:74830620-74830639 | Msa0140600:CDS | 40.0% |
| ! | AAGCAGTTCCTTTTGCTTCT+GGG | + | chr1_3:74830621-74830640 | Msa0140600:CDS | 40.0% |
| AAGTGCTAATGCAGTCTTTC+CGG | - | chr1_3:74830753-74830772 | None:intergenic | 40.0% | |
| GAAAGACTGCATTAGCACTT+GGG | + | chr1_3:74830753-74830772 | Msa0140600:CDS | 40.0% | |
| ATTAGCACTTGGGATATGTC+AGG | + | chr1_3:74830763-74830782 | Msa0140600:CDS | 40.0% | |
| AAAGAAGACCGAGGTTCTTA+TGG | + | chr1_3:74830921-74830940 | Msa0140600:CDS | 40.0% | |
| !!! | GAAAATTTTCGACGGGCTAT+CGG | + | chr1_3:74830943-74830962 | Msa0140600:CDS | 40.0% |
| ! | TAAGGAAGTATATGAAGGCG+AGG | + | chr1_3:74830984-74831003 | Msa0140600:CDS | 40.0% |
| !! | TTAAAACTGGGCTGGGATTT+TGG | + | chr1_3:74831029-74831048 | Msa0140600:intron | 40.0% |
| AGCAGACAAAGTGGTAACAA+GGG | - | chr1_3:74831065-74831084 | None:intergenic | 40.0% | |
| TAGCAGACAAAGTGGTAACA+AGG | - | chr1_3:74831066-74831085 | None:intergenic | 40.0% | |
| ! | GAAACTGAGAGTATAACAGG+AGG | + | chr1_3:74831157-74831176 | Msa0140600:CDS | 40.0% |
| ! | GAGAGTATAACAGGAGGTTA+TGG | + | chr1_3:74831163-74831182 | Msa0140600:CDS | 40.0% |
| AGGAACCAAGCAACTAAAGT+TGG | + | chr1_3:74831228-74831247 | Msa0140600:CDS | 40.0% | |
| ! | TCAAGGCATCATATATCGTG+GGG | - | chr1_3:74831255-74831274 | None:intergenic | 40.0% |
| ! | GATCAAGGCATCATATATCG+TGG | - | chr1_3:74831257-74831276 | None:intergenic | 40.0% |
| TGATGCCTTGATCAAGGAAA+AGG | + | chr1_3:74831264-74831283 | Msa0140600:CDS | 40.0% | |
| !! | ACTTTTATTTGGGTGGGAAC+TGG | + | chr1_3:74831359-74831378 | Msa0140600:intron | 40.0% |
| !! | CTTTTATTTGGGTGGGAACT+GGG | + | chr1_3:74831360-74831379 | Msa0140600:intron | 40.0% |
| ! | AAATAGTGGGGCTGTGAAAA+GGG | + | chr1_3:74831500-74831519 | Msa0140600:CDS | 40.0% |
| !! | CAGTAGCAAAAGCATCACTT+CGG | - | chr1_3:74831530-74831549 | None:intergenic | 40.0% |
| CTTTGCGGAGTAACATCTTA+GGG | - | chr1_3:74832108-74832127 | None:intergenic | 40.0% | |
| TTCTGCTACCATTGCAATAG+TGG | + | chr1_3:74832246-74832265 | Msa0140600:intron | 40.0% | |
| TGAAGTGATGAGAGAAGATG+GGG | - | chr1_3:74832427-74832446 | None:intergenic | 40.0% | |
| !! | CTGTCCGCTATTTCTCATAT+CGG | + | chr1_3:74832680-74832699 | Msa0140600:intron | 40.0% |
| !! | TAGCGGATTGCGGAAAATAA+CGG | - | chr1_3:74832718-74832737 | None:intergenic | 40.0% |
| GGATGTAACCCTACATGATT+TGG | + | chr1_3:74832964-74832983 | Msa0140600:intron | 40.0% | |
| TCTTCCTAGGTTTCATCATC+TGG | - | chr1_3:74833042-74833061 | None:intergenic | 40.0% | |
| GATGATGAAACCTAGGAAGA+CGG | + | chr1_3:74833042-74833061 | Msa0140600:CDS | 40.0% | |
| AGGTCATAAGTTCAAACACC+TGG | + | chr1_3:74833187-74833206 | Msa0140600:intron | 40.0% | |
| !! | ATTCTAAAGCAGACCCACAA+TGG | + | chr1_3:74833216-74833235 | Msa0140600:intron | 40.0% |
| !! | TTCTAAAGCAGACCCACAAT+GGG | + | chr1_3:74833217-74833236 | Msa0140600:intron | 40.0% |
| ACATAAAGTCTGCCCATTGT+GGG | - | chr1_3:74833232-74833251 | None:intergenic | 40.0% | |
| GTCAACCGATATATCGATGA+AGG | + | chr1_3:74833532-74833551 | Msa0140600:CDS | 40.0% | |
| ACAGGTGCATATGCTAGATA+TGG | + | chr1_3:74833674-74833693 | Msa0140600:intron | 40.0% | |
| !! | CTAGTAGCCCATCATTTTTG+AGG | + | chr1_3:74833864-74833883 | Msa0140600:intron | 40.0% |
| ACTGCAAAATCAGGTCTTCT+AGG | - | chr1_3:74833920-74833939 | None:intergenic | 40.0% | |
| AATCGATCCAATAGGTCAAC+AGG | - | chr1_3:74834139-74834158 | None:intergenic | 40.0% | |
| TGTTGACCTATTGGATCGAT+TGG | + | chr1_3:74834138-74834157 | Msa0140600:CDS | 40.0% | |
| TGATCACCAATCGATCCAAT+AGG | - | chr1_3:74834147-74834166 | None:intergenic | 40.0% | |
| AATTATTTCAGCTGGACCGT+AGG | - | chr1_3:74834182-74834201 | None:intergenic | 40.0% | |
| !! | GAGGAAAGTTTAGCTTTCCT+TGG | + | chr1_3:74834343-74834362 | Msa0140600:CDS | 40.0% |
| !! | GGAAAGTTTAGCTTTCCTTG+GGG | + | chr1_3:74834345-74834364 | Msa0140600:CDS | 40.0% |
| AGCGTTGTTGCCAAGATAAA+TGG | + | chr1_3:74834496-74834515 | Msa0140600:CDS | 40.0% | |
| ! | GTTGTCTCTGCCATTTATCT+TGG | - | chr1_3:74834509-74834528 | None:intergenic | 40.0% |
| ACGTCTACAACATGCTCAAT+AGG | - | chr1_3:74834866-74834885 | None:intergenic | 40.0% | |
| TTGAGCATGTTGTAGACGTA+AGG | + | chr1_3:74834867-74834886 | Msa0140600:three_prime_UTR | 40.0% | |
| TGAGCATGTTGTAGACGTAA+GGG | + | chr1_3:74834868-74834887 | Msa0140600:three_prime_UTR | 40.0% | |
| CACACTCACATTAAAGGCCT+AGG | + | chr1_3:74830339-74830358 | Msa0140600:CDS | 45.0% | |
| CATTAAAGGCCTAGGTCTTG+AGG | + | chr1_3:74830347-74830366 | Msa0140600:CDS | 45.0% | |
| GAGAACAAACCTCAAGACCT+AGG | - | chr1_3:74830359-74830378 | None:intergenic | 45.0% | |
| ! | TACACATGCCTGTTTGTTGC+GGG | + | chr1_3:74830481-74830500 | Msa0140600:intron | 45.0% |
| ! | TCCTTTTGCTTCTGGGTTTG+TGG | + | chr1_3:74830628-74830647 | Msa0140600:CDS | 45.0% |
| ! | CCTTTTGCTTCTGGGTTTGT+GGG | + | chr1_3:74830629-74830648 | Msa0140600:CDS | 45.0% |
| CATGATACGCCAGAAGAAGA+TGG | + | chr1_3:74830691-74830710 | Msa0140600:CDS | 45.0% | |
| GGAAAGACTGCATTAGCACT+TGG | + | chr1_3:74830752-74830771 | Msa0140600:CDS | 45.0% | |
| TTGGGATATGTCAGGAGCTT+GGG | + | chr1_3:74830771-74830790 | Msa0140600:CDS | 45.0% | |
| GCAGAATGGAACCTACAAAG+CGG | - | chr1_3:74830866-74830885 | None:intergenic | 45.0% | |
| AACGGAAGTAAAGAAGACCG+AGG | + | chr1_3:74830912-74830931 | Msa0140600:CDS | 45.0% | |
| GGCTATCGGTCTACGTATTA+AGG | + | chr1_3:74830957-74830976 | Msa0140600:CDS | 45.0% | |
| TTCCCTTGTTAAAACTGGGC+TGG | + | chr1_3:74831021-74831040 | Msa0140600:intron | 45.0% | |
| TCCCTTGTTAAAACTGGGCT+GGG | + | chr1_3:74831022-74831041 | Msa0140600:intron | 45.0% | |
| !! | TCCCAGCCCAGTTTTAACAA+GGG | - | chr1_3:74831026-74831045 | None:intergenic | 45.0% |
| !! | ATCCCAGCCCAGTTTTAACA+AGG | - | chr1_3:74831027-74831046 | None:intergenic | 45.0% |
| AGTGGTAACAAGGGAATCAC+AGG | - | chr1_3:74831056-74831075 | None:intergenic | 45.0% | |
| !! | TGTGATTTTGGTCCTGTGCA+AGG | + | chr1_3:74831114-74831133 | Msa0140600:intron | 45.0% |
| CCTTGATCAAGGAAAAGGTG+CGG | + | chr1_3:74831269-74831288 | Msa0140600:intron | 45.0% | |
| ! | CAAATAGTGGGGCTGTGAAA+AGG | + | chr1_3:74831499-74831518 | Msa0140600:CDS | 45.0% |
| TGAGTTTGACCTTGAAGCTG+AGG | + | chr1_3:74831548-74831567 | Msa0140600:CDS | 45.0% | |
| GAACATACTCCTCAGCTTCA+AGG | - | chr1_3:74831560-74831579 | None:intergenic | 45.0% | |
| GAGTATGTTCCACTTCCCAA+GGG | + | chr1_3:74831570-74831589 | Msa0140600:CDS | 45.0% | |
| TTCTTGTGAACCTCTCCCTT+GGG | - | chr1_3:74831588-74831607 | None:intergenic | 45.0% | |
| TTTCTTGTGAACCTCTCCCT+TGG | - | chr1_3:74831589-74831608 | None:intergenic | 45.0% | |
| CATAGTACGGTTTATCGCCA+AGG | - | chr1_3:74831704-74831723 | None:intergenic | 45.0% | |
| GTCTAGCAGAGGAACTAGTT+TGG | + | chr1_3:74832064-74832083 | Msa0140600:intron | 45.0% | |
| ! | TAGCAGAGGAACTAGTTTGG+TGG | + | chr1_3:74832067-74832086 | Msa0140600:intron | 45.0% |
| CCTTTGCGGAGTAACATCTT+AGG | - | chr1_3:74832109-74832128 | None:intergenic | 45.0% | |
| CCTAAGATGTTACTCCGCAA+AGG | + | chr1_3:74832106-74832125 | Msa0140600:intron | 45.0% | |
| GCAGAATCGCAATAGCGTAT+CGG | - | chr1_3:74832232-74832251 | None:intergenic | 45.0% | |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | - | chr1_3:74832376-74832395 | None:intergenic | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | - | chr1_3:74832377-74832396 | None:intergenic | 45.0% |
| TGAGAGGTTACCTAGGTAGT+GGG | - | chr1_3:74832384-74832403 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | - | chr1_3:74832385-74832404 | None:intergenic | 45.0% | |
| TCAGTGATGAGAGGTTACCT+AGG | - | chr1_3:74832391-74832410 | None:intergenic | 45.0% | |
| ACAGCATAGCGCGATATTAG+CGG | - | chr1_3:74832664-74832683 | None:intergenic | 45.0% | |
| GGCAGCATCCAAATCATGTA+GGG | - | chr1_3:74832975-74832994 | None:intergenic | 45.0% | |
| TGGCAGCATCCAAATCATGT+AGG | - | chr1_3:74832976-74832995 | None:intergenic | 45.0% | |
| AAAATATCTTGCCCCCCTTG+AGG | - | chr1_3:74833007-74833026 | None:intergenic | 45.0% | |
| TCAGTGATTTCCGTCTTCCT+AGG | - | chr1_3:74833055-74833074 | None:intergenic | 45.0% | |
| !! | CTGCTTTAGAATGCCTTACC+AGG | - | chr1_3:74833208-74833227 | None:intergenic | 45.0% |
| CACATAAAGTCTGCCCATTG+TGG | - | chr1_3:74833233-74833252 | None:intergenic | 45.0% | |
| CACAATGGGCAGACTTTATG+TGG | + | chr1_3:74833231-74833250 | Msa0140600:intron | 45.0% | |
| CGTCAATAAACAGAACCCCA+GGG | - | chr1_3:74833573-74833592 | None:intergenic | 45.0% | |
| TCGTCAATAAACAGAACCCC+AGG | - | chr1_3:74833574-74833593 | None:intergenic | 45.0% | |
| TGGGGTTCTGTTTATTGACG+AGG | + | chr1_3:74833573-74833592 | Msa0140600:CDS | 45.0% | |
| ACTGATATGACCAGTCCTCA+TGG | + | chr1_3:74834109-74834128 | Msa0140600:CDS | 45.0% | |
| TGGCATACCTGTTGACCTAT+TGG | + | chr1_3:74834129-74834148 | Msa0140600:CDS | 45.0% | |
| CGGTCCAGCTGAAATAATTC+AGG | + | chr1_3:74834183-74834202 | Msa0140600:CDS | 45.0% | |
| ! | TTAGCTTTCCTTGGGGAGAT+TGG | + | chr1_3:74834352-74834371 | Msa0140600:CDS | 45.0% |
| ATTGCGTGTTTGTCCTAGGT+AGG | - | chr1_3:74834795-74834814 | None:intergenic | 45.0% | |
| AAGGATTGCGTGTTTGTCCT+AGG | - | chr1_3:74834799-74834818 | None:intergenic | 45.0% | |
| !! | TAGTATTTATATAAAAAATT+TGG | + | chr1_3:74829918-74829937 | Msa0140600:intron | 5.0% |
| !! | ATGATAAAAATAATTAAAAT+GGG | - | chr1_3:74834046-74834065 | None:intergenic | 5.0% |
| GGAATCGCTTTCTCTTACGG+CGG | - | chr1_3:74829463-74829482 | None:intergenic | 50.0% | |
| GCCGTAAGAGAAAGCGATTC+CGG | + | chr1_3:74829462-74829481 | Msa0140600:five_prime_UTR | 50.0% | |
| GCCGGAATCGCTTTCTCTTA+CGG | - | chr1_3:74829466-74829485 | None:intergenic | 50.0% | |
| CCATAGAGCACGCAGAATTG+TGG | - | chr1_3:74830019-74830038 | None:intergenic | 50.0% | |
| CCACAATTCTGCGTGCTCTA+TGG | + | chr1_3:74830016-74830035 | Msa0140600:intron | 50.0% | |
| TGGTTTCACCCGCAACAAAC+AGG | - | chr1_3:74830492-74830511 | None:intergenic | 50.0% | |
| CCCACAAACCCAGAAGCAAA+AGG | - | chr1_3:74830632-74830651 | None:intergenic | 50.0% | |
| ATACGCCAGAAGAAGATGGC+TGG | + | chr1_3:74830695-74830714 | Msa0140600:CDS | 50.0% | |
| ATGCAGTCTTTCCGGTTCCA+GGG | - | chr1_3:74830745-74830764 | None:intergenic | 50.0% | |
| AATGCAGTCTTTCCGGTTCC+AGG | - | chr1_3:74830746-74830765 | None:intergenic | 50.0% | |
| CTTGGGATATGTCAGGAGCT+TGG | + | chr1_3:74830770-74830789 | Msa0140600:CDS | 50.0% | |
| GTAGGTTCCATTCTGCCCAA+TGG | + | chr1_3:74830870-74830889 | Msa0140600:intron | 50.0% | |
| GTTCCATTCTGCCCAATGGT+TGG | + | chr1_3:74830874-74830893 | Msa0140600:CDS | 50.0% | |
| GAACCAACCATTGGGCAGAA+TGG | - | chr1_3:74830880-74830899 | None:intergenic | 50.0% | |
| AGTTTCTTCGGGAGAGAGCT+CGG | - | chr1_3:74831143-74831162 | None:intergenic | 50.0% | |
| GGGGTCCAACTTTAGTTGCT+TGG | - | chr1_3:74831236-74831255 | None:intergenic | 50.0% | |
| ! | CCGCACCTTTTCCTTGATCA+AGG | - | chr1_3:74831272-74831291 | None:intergenic | 50.0% |
| GGGATTTATGCACACTGTGC+AGG | + | chr1_3:74831446-74831465 | Msa0140600:intron | 50.0% | |
| GGAGTATGTTCCACTTCCCA+AGG | + | chr1_3:74831569-74831588 | Msa0140600:CDS | 50.0% | |
| CTGCTAGACTGCTATGCAGA+TGG | - | chr1_3:74832053-74832072 | None:intergenic | 50.0% | |
| TCTGCATAGCAGTCTAGCAG+AGG | + | chr1_3:74832053-74832072 | Msa0140600:intron | 50.0% | |
| !! | GCTGAGTTGGTGATGAGATG+AGG | + | chr1_3:74832339-74832358 | Msa0140600:intron | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | - | chr1_3:74832375-74832394 | None:intergenic | 50.0% |
| GAGAGGTTACCTAGGTAGTG+GGG | - | chr1_3:74832383-74832402 | None:intergenic | 50.0% | |
| AGAGGAGGTTCAGTGATGAG+AGG | - | chr1_3:74832400-74832419 | None:intergenic | 50.0% | |
| AGTGATGAGAGAAGATGGGG+AGG | - | chr1_3:74832424-74832443 | None:intergenic | 50.0% | |
| TATTAGCGGAAGCCGCAAAG+TGG | - | chr1_3:74832650-74832669 | None:intergenic | 50.0% | |
| TGGGCCAGATGATGAAACCT+AGG | + | chr1_3:74833035-74833054 | Msa0140600:CDS | 50.0% | |
| GTGTTGCAGAACTTGTCCCT+GGG | + | chr1_3:74833554-74833573 | Msa0140600:CDS | 50.0% | |
| TGTTGCAGAACTTGTCCCTG+GGG | + | chr1_3:74833555-74833574 | Msa0140600:CDS | 50.0% | |
| AACAGGTATGCCATGAGGAC+TGG | - | chr1_3:74834122-74834141 | None:intergenic | 50.0% | |
| AGGTCAACAGGTATGCCATG+AGG | - | chr1_3:74834127-74834146 | None:intergenic | 50.0% | |
| TCTAGCTATCCGAGCTCAAG+TGG | + | chr1_3:74834303-74834322 | Msa0140600:CDS | 50.0% | |
| CAAGTTCCTCCACTTGAGCT+CGG | - | chr1_3:74834315-74834334 | None:intergenic | 50.0% | |
| !! | TCAAGTGGAGGAACTTGCTG+TGG | + | chr1_3:74834318-74834337 | Msa0140600:CDS | 50.0% |
| TGGCAGAGACAACATCTGCA+AGG | + | chr1_3:74834516-74834535 | Msa0140600:CDS | 50.0% | |
| TTGCTGCTCTTGGAGAAGCT+TGG | - | chr1_3:74834678-74834697 | None:intergenic | 50.0% | |
| GCAGCAATTAGGCACTTCCA+AGG | - | chr1_3:74834839-74834858 | None:intergenic | 50.0% | |
| ! | GCGGTAGCGGCTAGGTTTAA+GGG | - | chr1_3:74829444-74829463 | None:intergenic | 55.0% |
| GCTTTCTCTTACGGCGGTAG+CGG | - | chr1_3:74829457-74829476 | None:intergenic | 55.0% | |
| TGGGTTTGTGGGACAAGCTG+AGG | + | chr1_3:74830640-74830659 | Msa0140600:CDS | 55.0% | |
| ! | AAGAGAAGCGTGTGGCCTTG+TGG | + | chr1_3:74830664-74830683 | Msa0140600:CDS | 55.0% |
| GGCGTATCATGTCGACCACA+AGG | - | chr1_3:74830682-74830701 | None:intergenic | 55.0% | |
| CCTTGCCAGCCATCTTCTTC+TGG | - | chr1_3:74830703-74830722 | None:intergenic | 55.0% | |
| CCAGAAGAAGATGGCTGGCA+AGG | + | chr1_3:74830700-74830719 | Msa0140600:CDS | 55.0% | |
| TGCAGTCTTTCCGGTTCCAG+GGG | - | chr1_3:74830744-74830763 | None:intergenic | 55.0% | |
| ATGTCAGGAGCTTGGGACCA+AGG | + | chr1_3:74830778-74830797 | Msa0140600:CDS | 55.0% | |
| CACACTGTGCAGGTAGCTGT+CGG | + | chr1_3:74831456-74831475 | Msa0140600:intron | 55.0% | |
| ACACTGTGCAGGTAGCTGTC+GGG | + | chr1_3:74831457-74831476 | Msa0140600:intron | 55.0% | |
| AGTGGGGCTGTGAAAAGGGT+TGG | + | chr1_3:74831504-74831523 | Msa0140600:CDS | 55.0% | |
| TGTTCCACTTCCCAAGGGAG+AGG | + | chr1_3:74831575-74831594 | Msa0140600:CDS | 55.0% | |
| TGAACCTCTCCCTTGGGAAG+TGG | - | chr1_3:74831582-74831601 | None:intergenic | 55.0% | |
| ACCCCTAAACCCCACTACCT+AGG | + | chr1_3:74832371-74832390 | Msa0140600:intron | 55.0% | |
| ! | GGTGTTGCAGAACTTGTCCC+TGG | + | chr1_3:74833553-74833572 | Msa0140600:CDS | 55.0% |
| AGCTATCCGAGCTCAAGTGG+AGG | + | chr1_3:74834306-74834325 | Msa0140600:CDS | 55.0% | |
| !! | GGAGGAACTTGCTGTGGATG+AGG | + | chr1_3:74834324-74834343 | Msa0140600:CDS | 55.0% |
| ATCTTGGCAACAACGCTCGC+AGG | - | chr1_3:74834493-74834512 | None:intergenic | 55.0% | |
| ! | GGCGGTAGCGGCTAGGTTTA+AGG | - | chr1_3:74829445-74829464 | None:intergenic | 60.0% |
| ACGGAACCCTCTCAGCTCAC+TGG | + | chr1_3:74829512-74829531 | Msa0140600:five_prime_UTR | 60.0% | |
| CGCTGTCCAGTGAGCTGAGA+GGG | - | chr1_3:74829521-74829540 | None:intergenic | 60.0% | |
| TCGCTGTCCAGTGAGCTGAG+AGG | - | chr1_3:74829522-74829541 | None:intergenic | 60.0% | |
| ! | GCTGAGGCAAGAGAAGCGTG+TGG | + | chr1_3:74830656-74830675 | Msa0140600:CDS | 60.0% |
| GCAGTCTTTCCGGTTCCAGG+GGG | - | chr1_3:74830743-74830762 | None:intergenic | 60.0% | |
| AGAGCTCGGTCACCTTGCAC+AGG | - | chr1_3:74831129-74831148 | None:intergenic | 60.0% | |
| CACTGTGCAGGTAGCTGTCG+GGG | + | chr1_3:74831458-74831477 | Msa0140600:intron | 60.0% | |
| AGAAGATGGGGAGGCAGAGG+AGG | - | chr1_3:74832415-74832434 | None:intergenic | 60.0% | |
| GAGAGAAGATGGGGAGGCAG+AGG | - | chr1_3:74832418-74832437 | None:intergenic | 60.0% | |
| ! | CTCTTACGGCGGTAGCGGCT+AGG | - | chr1_3:74829452-74829471 | None:intergenic | 65.0% |
| GGGTTCCGTGAGTGCACCGT+CGG | - | chr1_3:74829501-74829520 | None:intergenic | 65.0% | |
| ! | GGCAAGGCACTCCTTCTCGC+CGG | + | chr1_3:74830716-74830735 | Msa0140600:CDS | 65.0% |
| ! | GCAAGGCACTCCTTCTCGCC+GGG | + | chr1_3:74830717-74830736 | Msa0140600:CDS | 65.0% |
| CTGCCAACGCGCGACCTCAA+GGG | + | chr1_3:74832990-74833009 | Msa0140600:CDS | 65.0% | |
| TGCCAACGCGCGACCTCAAG+GGG | + | chr1_3:74832991-74833010 | Msa0140600:CDS | 65.0% | |
| ! | CGTCGGCGAGCTCTTGGTGC+CGG | - | chr1_3:74829484-74829503 | None:intergenic | 70.0% |
| CGGCACCAAGAGCTCGCCGA+CGG | + | chr1_3:74829482-74829501 | Msa0140600:five_prime_UTR | 70.0% | |
| GTGCACCGTCGGCGAGCTCT+TGG | - | chr1_3:74829490-74829509 | None:intergenic | 70.0% | |
| GCTCGCCGACGGTGCACTCA+CGG | + | chr1_3:74829493-74829512 | Msa0140600:five_prime_UTR | 70.0% | |
| CTTTCCGGTTCCAGGGGGCC+CGG | - | chr1_3:74830738-74830757 | None:intergenic | 70.0% | |
| GCTGCCAACGCGCGACCTCA+AGG | + | chr1_3:74832989-74833008 | Msa0140600:CDS | 70.0% | |
| GCCAACGCGCGACCTCAAGG+GGG | + | chr1_3:74832992-74833011 | Msa0140600:CDS | 70.0% | |
| CCAACGCGCGACCTCAAGGG+GGG | + | chr1_3:74832993-74833012 | Msa0140600:CDS | 70.0% | |
| TTCCAGGGGGCCCGGCGAGA+AGG | - | chr1_3:74830730-74830749 | None:intergenic | 75.0% | |
| CCCCCCTTGAGGTCGCGCGT+TGG | - | chr1_3:74832996-74833015 | None:intergenic | 75.0% | |
| ! | CTCCTTCTCGCCGGGCCCCC+TGG | + | chr1_3:74830725-74830744 | Msa0140600:CDS | 80.0% |
| ! | CTCGCCGGGCCCCCTGGAAC+CGG | + | chr1_3:74830731-74830750 | Msa0140600:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 74829378 | 74834927 | 74829378 | ID=Msa0140600;Name=Msa0140600 |
| chr1_3 | mRNA | 74829378 | 74834927 | 74829378 | ID=Msa0140600-mRNA-1;Parent=Msa0140600;Name=Msa0140600-mRNA-1;_AED=0.15;_eAED=0.15;_QI=239|1|1|1|0.84|0.71|14|176|458 |
| chr1_3 | exon | 74829378 | 74829573 | 74829378 | ID=Msa0140600-mRNA-1:exon:26126;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74830236 | 74830368 | 74830236 | ID=Msa0140600-mRNA-1:exon:26127;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74830611 | 74830799 | 74830611 | ID=Msa0140600-mRNA-1:exon:26128;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74830874 | 74831005 | 74830874 | ID=Msa0140600-mRNA-1:exon:26129;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74831136 | 74831285 | 74831136 | ID=Msa0140600-mRNA-1:exon:26130;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74831468 | 74831623 | 74831468 | ID=Msa0140600-mRNA-1:exon:26131;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74832965 | 74833099 | 74832965 | ID=Msa0140600-mRNA-1:exon:26132;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74833529 | 74833594 | 74833529 | ID=Msa0140600-mRNA-1:exon:26133;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74833678 | 74833784 | 74833678 | ID=Msa0140600-mRNA-1:exon:26134;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74834105 | 74834204 | 74834105 | ID=Msa0140600-mRNA-1:exon:26135;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74834301 | 74834392 | 74834301 | ID=Msa0140600-mRNA-1:exon:26136;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74834468 | 74834537 | 74834468 | ID=Msa0140600-mRNA-1:exon:26137;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74834626 | 74834798 | 74834626 | ID=Msa0140600-mRNA-1:exon:26138;Parent=Msa0140600-mRNA-1 |
| chr1_3 | exon | 74834835 | 74834927 | 74834835 | ID=Msa0140600-mRNA-1:exon:26139;Parent=Msa0140600-mRNA-1 |
| chr1_3 | five_prime_UTR | 74829378 | 74829573 | 74829378 | ID=Msa0140600-mRNA-1:five_prime_utr;Parent=Msa0140600-mRNA-1 |
| chr1_3 | five_prime_UTR | 74830236 | 74830278 | 74830236 | ID=Msa0140600-mRNA-1:five_prime_utr;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74830279 | 74830368 | 74830279 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74830611 | 74830799 | 74830611 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74830874 | 74831005 | 74830874 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74831136 | 74831285 | 74831136 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74831468 | 74831623 | 74831468 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74832965 | 74833099 | 74832965 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74833529 | 74833594 | 74833529 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74833678 | 74833784 | 74833678 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74834105 | 74834204 | 74834105 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74834301 | 74834392 | 74834301 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74834468 | 74834537 | 74834468 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | CDS | 74834626 | 74834715 | 74834626 | ID=Msa0140600-mRNA-1:cds;Parent=Msa0140600-mRNA-1 |
| chr1_3 | three_prime_UTR | 74834716 | 74834798 | 74834716 | ID=Msa0140600-mRNA-1:three_prime_utr;Parent=Msa0140600-mRNA-1 |
| chr1_3 | three_prime_UTR | 74834835 | 74834927 | 74834835 | ID=Msa0140600-mRNA-1:three_prime_utr;Parent=Msa0140600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
