AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0043190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043190 MtrunA17_Chr1g0209041 99.440 357 2 0 1 357 1 357 0.0 740
Msa0043190 MtrunA17_Chr5g0442111 83.784 74 3 1 272 345 24 88 1.55e-39 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043190 AT1G68200.1 48.693 306 110 8 62 352 29 302 1.97e-84 258
Msa0043190 AT1G68200.5 48.693 306 110 8 62 352 29 302 1.97e-84 258
Msa0043190 AT1G68200.2 48.366 306 110 8 62 352 29 301 6.84e-83 254
Msa0043190 AT1G68200.6 48.366 306 110 8 62 352 29 301 6.84e-83 254
Msa0043190 AT1G66810.1 62.329 146 46 1 200 345 168 304 4.86e-56 186
Msa0043190 AT1G66810.3 62.329 146 46 1 200 345 168 304 4.86e-56 186
Msa0043190 AT1G68200.4 41.026 156 72 5 62 217 29 164 4.94e-22 92.8
Msa0043190 AT1G68200.3 41.026 156 72 5 62 217 29 164 4.94e-22 92.8

Find 130 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGCAGGATGGTCCTTGC+TGG 0.159266 1_1:-74288875 Msa0043190:CDS
CTGCAGAGCTTCAACTTCTT+TGG 0.179049 1_1:+74291447 None:intergenic
TCTTTCCAGCTTCATTGATC+TGG 0.216499 1_1:+74288772 None:intergenic
AATTCAAAGTGTCAAACTTA+TGG 0.217105 1_1:+74288511 None:intergenic
ATTGCTAACTTTGCAGAGTA+TGG 0.254484 1_1:+74288379 None:intergenic
GCCGCCGTTGCTGCTGTTTC+CGG 0.266911 1_1:+74291588 None:intergenic
GCCGATGCCGTAACCGCTTT+TGG 0.267264 1_1:+74291699 None:intergenic
CAACTTCTTTGGAACTTTCC+AGG 0.279329 1_1:+74291458 None:intergenic
TAGCGTGGGTGGCGGATCAC+TGG 0.295264 1_1:+74288908 None:intergenic
GATCTAACAGAAATGCTCTT+TGG 0.302932 1_1:+74291118 None:intergenic
GCGGGAGCGAGTAGCGCTTT+TGG 0.327959 1_1:+74291033 None:intergenic
ATTCAAAGTGTCAAACTTAT+GGG 0.343284 1_1:+74288512 None:intergenic
GTCAATTCGCTCATGGCATT+GGG 0.349776 1_1:-74288940 Msa0043190:CDS
GGTTTCCGTGGCTTGAATCT+TGG 0.355570 1_1:-74291283 Msa0043190:CDS
CTTTCCAGCTTCATTGATCT+GGG 0.356760 1_1:+74288773 None:intergenic
TCCCTTTGGTTCGTTATGTT+GGG 0.356995 1_1:+74288455 None:intergenic
TTCCCTTTGGTTCGTTATGT+TGG 0.360686 1_1:+74288454 None:intergenic
CATGACGGAAATGGCATCTA+TGG 0.367595 1_1:+74288834 None:intergenic
TTCATAGAGTACCTTCCCTT+TGG 0.372233 1_1:+74288441 None:intergenic
CTTTATCCTTACTCTGACCT+TGG 0.377357 1_1:-74291556 Msa0043190:CDS
AATTACAACAATTTACAAAC+AGG 0.378341 1_1:-74288676 Msa0043190:three_prime_UTR
GAAACTGGCACATGCCCTTA+TGG 0.383739 1_1:-74288971 Msa0043190:CDS
TAATAATAACAAGGAGTTGC+AGG 0.387088 1_1:-74291215 Msa0043190:CDS
TGACATAGCTTTCTCTTGTT+CGG 0.389780 1_1:+74288805 None:intergenic
CCGTCATCCAAAAGCGGTTA+CGG 0.390482 1_1:-74291706 Msa0043190:CDS
GATACAGAAGCATCAGGATA+TGG 0.396830 1_1:-74291512 Msa0043190:CDS
CTGTTTCCGGCGAGCGATGA+TGG 0.396990 1_1:+74291601 None:intergenic
TGTAACAAATGGCAGGAAAC+TGG 0.399409 1_1:-74288986 Msa0043190:CDS
TCTGCAGGATGGTCCTTGCT+GGG 0.402584 1_1:-74288874 Msa0043190:CDS
CGGTAAGTGCATGACGGAAA+TGG 0.404017 1_1:+74288825 None:intergenic
CTTCTGCAACTCTTTGTTCA+CGG 0.410248 1_1:+74291402 None:intergenic
ACATACAAATACGTCTATAT+TGG 0.413990 1_1:-74288479 Msa0043190:three_prime_UTR
CCTTCTCGTTCAAGCTTCGC+TGG 0.421155 1_1:-74291371 Msa0043190:CDS
TATGTTTCTCAGTCGTCTCC+TGG 0.438714 1_1:-74291476 Msa0043190:CDS
CAAACGGAGTTGATTGAGTC+TGG 0.444450 1_1:+74291317 None:intergenic
TGTCAATTCGCTCATGGCAT+TGG 0.444853 1_1:-74288941 Msa0043190:CDS
AATTTAGAAAGAGAATGATA+TGG 0.456154 1_1:+74292154 None:intergenic
CTTGAAGCTTGCTCCGCCTC+CGG 0.468503 1_1:-74291086 Msa0043190:CDS
AATTGACAGTGGTCTCCATA+AGG 0.472418 1_1:+74288956 None:intergenic
CGTGGCTTGAATCTTGGAGA+TGG 0.475661 1_1:-74291277 Msa0043190:CDS
GAAAGGAAAACTGTGCTGAT+TGG 0.476246 1_1:-74291255 Msa0043190:CDS
GGCGTTCGACTGCATGTGAC+CGG 0.476954 1_1:+74291666 None:intergenic
CGAGAAGCTTCTGCTTGTGA+AGG 0.483077 1_1:-74292104 Msa0043190:five_prime_UTR
AGCATTTCTGTTAGATCCAA+TGG 0.486635 1_1:-74291112 Msa0043190:CDS
TCCAAAAGCGGTTACGGCAT+CGG 0.490846 1_1:-74291700 Msa0043190:CDS
CGTCGGACTCTCATCAGATT+CGG 0.492348 1_1:+74291186 None:intergenic
GAAGCTCTGCAGCAGGAAAA+CGG 0.500754 1_1:-74291436 Msa0043190:CDS
AAACCTTGCAACACATCAAA+CGG 0.507246 1_1:+74291301 None:intergenic
TGAGAATAACGGTGTTGAAA+CGG 0.507485 1_1:-74291155 Msa0043190:CDS
AGCGTGGGTGGCGGATCACT+GGG 0.510898 1_1:+74288909 None:intergenic
AAATGGCATCTATGGCCATA+CGG 0.511220 1_1:+74288842 None:intergenic
ATGCGTGATACAGAAGCATC+AGG 0.518868 1_1:-74291518 Msa0043190:CDS
TCGCTGGAGAACCGATTCAA+TGG 0.519751 1_1:-74291355 Msa0043190:CDS
ATTCTTGAGGAGAATGTGTA+TGG 0.519892 1_1:-74288559 Msa0043190:three_prime_UTR
GCTGGGGTTGTATGCCCGTA+TGG 0.521541 1_1:-74288857 Msa0043190:CDS
CTCGCCGGAAACAGCAGCAA+CGG 0.524709 1_1:-74291592 Msa0043190:CDS
GGAAACAGCAGCAACGGCGG+CGG 0.524773 1_1:-74291586 Msa0043190:CDS
GCCGGAAACAGCAGCAACGG+CGG 0.525054 1_1:-74291589 Msa0043190:CDS
GCTACAAAACTGAGGTCTGC+AGG 0.527724 1_1:-74288889 Msa0043190:CDS
AATGGCATCTATGGCCATAC+GGG 0.528487 1_1:+74288843 None:intergenic
TTAGTTACGACGGCCGGAGG+CGG 0.529646 1_1:+74291073 None:intergenic
AGAAGTTGAAGCTCTGCAGC+AGG 0.529958 1_1:-74291443 Msa0043190:CDS
ATTGACAGTGGTCTCCATAA+GGG 0.530052 1_1:+74288957 None:intergenic
TAAGCCCAGATCAATGAAGC+TGG 0.530814 1_1:-74288777 Msa0043190:CDS
AGCAAGCTTCAAGTAGCCAT+TGG 0.531440 1_1:+74291096 None:intergenic
AGACTGAGCTCTGTAACAAA+TGG 0.531908 1_1:-74288997 Msa0043190:CDS
AGGATCCGCCACCATTGAAT+CGG 0.534519 1_1:+74291344 None:intergenic
GGAACGCTTGCAGCAAATTG+AGG 0.538123 1_1:-74288593 Msa0043190:three_prime_UTR
GCTCAGTCTTGAACATCCCC+TGG 0.541107 1_1:+74289011 None:intergenic
GAAGCTTCTGCTTGTGAAGG+TGG 0.541524 1_1:-74292101 Msa0043190:five_prime_UTR
AATGAAGCTGGAAAGATGAA+TGG 0.545232 1_1:-74288765 Msa0043190:exon
TCTGTTCCAAGGTCAGAGTA+AGG 0.546191 1_1:+74291550 None:intergenic
CGAATTTGATCGTAACAGAA+AGG 0.555671 1_1:+74292058 None:intergenic
TTGTAATATGATGTTTCTAG+TGG 0.555975 1_1:-74288344 Msa0043190:three_prime_UTR
GATCTTCCATCATCGCTCGC+CGG 0.559218 1_1:-74291607 Msa0043190:CDS
ACTCCGTTTGATGTGTTGCA+AGG 0.560653 1_1:-74291304 Msa0043190:CDS
TGAGCTCTGTAACAAATGGC+AGG 0.566245 1_1:-74288993 Msa0043190:CDS
AGCAAATTGAGGTCTATAGC+AGG 0.566632 1_1:-74288582 Msa0043190:three_prime_UTR
AGCATTGTTGTTAGTTACGA+CGG 0.567553 1_1:+74291063 None:intergenic
CATCTCCAAGATTCAAGCCA+CGG 0.567612 1_1:+74291278 None:intergenic
TGTGCGAGGAGGGCAGAAAG+AGG 0.570699 1_1:-74289062 Msa0043190:CDS
GACCACTGTCAATTCGCTCA+TGG 0.571725 1_1:-74288947 Msa0043190:CDS
TTCAAAGTGTCAAACTTATG+GGG 0.572051 1_1:+74288513 None:intergenic
CTGCAGGATGGTCCTTGCTG+GGG 0.572424 1_1:-74288873 Msa0043190:CDS
AGAGGAAGAGCCTCTTGAGA+TGG 0.573431 1_1:-74289044 Msa0043190:CDS
AAAAGGTATTTGTGCGAGGA+GGG 0.574881 1_1:-74289072 Msa0043190:CDS
GAGAACCGATTCAATGGTGG+CGG 0.578241 1_1:-74291349 Msa0043190:CDS
CCAGCGAAGCTTGAACGAGA+AGG 0.578885 1_1:+74291371 None:intergenic
TACAACTGTATCAGATTGAG+TGG 0.578967 1_1:+74291003 None:intergenic
TGAGATGGTTGTGTACAACC+AGG 0.582022 1_1:-74289029 Msa0043190:CDS
CTTGAATCTTGGAGATGGAA+AGG 0.582921 1_1:-74291272 Msa0043190:CDS
CAGATTGAGTGGAGGAAGCG+CGG 0.588323 1_1:+74291014 None:intergenic
TGGAAAGATGAATGGTCTCA+TGG 0.589960 1_1:-74288757 Msa0043190:exon
CGGAGTTGATTGAGTCTGGA+CGG 0.589982 1_1:+74291321 None:intergenic
GGTCTATAGCAGGATTCTTG+AGG 0.591010 1_1:-74288572 Msa0043190:three_prime_UTR
GTCCCAACATAACGAACCAA+AGG 0.592529 1_1:-74288457 Msa0043190:three_prime_UTR
TCCCAACATAACGAACCAAA+GGG 0.594883 1_1:-74288456 Msa0043190:three_prime_UTR
GCAACTCTTTGTTCACGGCA+CGG 0.595404 1_1:+74291407 None:intergenic
AGATTGAGTGGAGGAAGCGC+GGG 0.600576 1_1:+74291015 None:intergenic
CAAAAGGTATTTGTGCGAGG+AGG 0.603500 1_1:-74289073 Msa0043190:CDS
TTGTTGTTAGTTACGACGGC+CGG 0.605294 1_1:+74291067 None:intergenic
CTTGTTCGGTAAGTGCATGA+CGG 0.607121 1_1:+74288819 None:intergenic
GATGTGTTGCAAGGTTTCCG+TGG 0.607851 1_1:-74291295 Msa0043190:CDS
GGTCACATGCAGTCGAACGC+CGG 0.607925 1_1:-74291664 Msa0043190:CDS
CAAAACTGAGGTCTGCAGGA+TGG 0.616724 1_1:-74288885 Msa0043190:CDS
ACGAGTGTGATTGAGAATAA+CGG 0.622937 1_1:-74291166 Msa0043190:CDS
ATGAGTCGTACTCTGTTCCA+AGG 0.623681 1_1:+74291539 None:intergenic
CAGCAAAAGGTATTTGTGCG+AGG 0.628338 1_1:-74289076 Msa0043190:CDS
CTGGAGAACCGATTCAATGG+TGG 0.634958 1_1:-74291352 Msa0043190:CDS
TGTTCTCCGTCATCCAAAAG+CGG 0.637659 1_1:-74291712 Msa0043190:CDS
TCAAAGTGTCAAACTTATGG+GGG 0.638301 1_1:+74288514 None:intergenic
GAGATGGTTGTGTACAACCA+GGG 0.638365 1_1:-74289028 Msa0043190:CDS
TTGTTAGTTACGACGGCCGG+AGG 0.641381 1_1:+74291070 None:intergenic
GGCATCGGCGTCAACAACGC+CGG 0.645707 1_1:-74291685 Msa0043190:CDS
TCAATTCGCTCATGGCATTG+GGG 0.646224 1_1:-74288939 Msa0043190:CDS
TTGTACACAACCATCTCAAG+AGG 0.647753 1_1:+74289034 None:intergenic
ATTACAACAATTTACAAACA+GGG 0.648532 1_1:-74288675 Msa0043190:three_prime_UTR
AACATAACGAACCAAAGGGA+AGG 0.651792 1_1:-74288452 Msa0043190:three_prime_UTR
ACCGATCAAAATGCATAACA+AGG 0.654571 1_1:-74291740 Msa0043190:exon
AACTGTATCAGATTGAGTGG+AGG 0.659126 1_1:+74291006 None:intergenic
TAACATCAATAATAATAACA+AGG 0.675567 1_1:-74291224 Msa0043190:CDS
TGCCATGAGCGAATTGACAG+TGG 0.682669 1_1:+74288945 None:intergenic
TTATTCTCAATCACACTCGT+CGG 0.688787 1_1:+74291169 None:intergenic
AGTTGATTGAGTCTGGACGG+AGG 0.689033 1_1:+74291324 None:intergenic
ACGGGCATACAACCCCAGCA+AGG 0.691546 1_1:+74288861 None:intergenic
ATAACGGTGTTGAAACGGAG+AGG 0.717587 1_1:-74291150 Msa0043190:CDS
CCACCCACGCTACAAAACTG+AGG 0.721664 1_1:-74288897 Msa0043190:CDS
TTGACTCAAAGCATATACAA+CGG 0.726287 1_1:-74288724 Msa0043190:three_prime_UTR
AGATGGTTGTGTACAACCAG+GGG 0.741581 1_1:-74289027 Msa0043190:CDS
GTACAACGAAGCAAACACGC+CGG 0.782658 1_1:+74291645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTATGTTGAAAATA+AGG - chr1_1:74290951-74290970 Msa0043190:intron 10.0%
!! TAACATCAATAATAATAACA+AGG - chr1_1:74289144-74289163 Msa0043190:intron 15.0%
!! ATTATAATGTAAAAACTGTA+TGG + chr1_1:74290408-74290427 None:intergenic 15.0%
!!! CAGTTTTTACATTATAATTA+AGG - chr1_1:74290410-74290429 Msa0043190:intron 15.0%
!!! TTTTTACATTATAATTAAGG+TGG - chr1_1:74290413-74290432 Msa0043190:intron 15.0%
!! TAACAAAACAAATAACTAAA+TGG + chr1_1:74290835-74290854 None:intergenic 15.0%
!! AAAGCATATATTAATAATAG+AGG + chr1_1:74290930-74290949 None:intergenic 15.0%
!! AAAGTAATACCAAAAAAAAA+GGG - chr1_1:74291754-74291773 Msa0043190:intron 15.0%
!!! TATGAAATAATACCATTTTT+TGG - chr1_1:74291944-74291963 Msa0043190:intron 15.0%
!!! TTTCTATACTTATTCTTTTA+AGG - chr1_1:74292060-74292079 Msa0043190:five_prime_UTR 15.0%
!!! TCAAGTAAACTTTTTTTTTT+TGG - chr1_1:74292116-74292135 Msa0043190:five_prime_UTR 15.0%
!! AATTTAGAAAGAGAATGATA+TGG + chr1_1:74288217-74288236 None:intergenic 20.0%
!!! GTTTGTATATTTTCTTGAAT+CGG - chr1_1:74288424-74288443 Msa0043190:three_prime_UTR 20.0%
!! TCTCTAAATCTATGATATAA+AGG + chr1_1:74290110-74290129 None:intergenic 20.0%
!!! CGATATTTTAAACTAATAGA+TGG - chr1_1:74290147-74290166 Msa0043190:intron 20.0%
!!! GCATCAAAATTTAACTTAAT+TGG + chr1_1:74290383-74290402 None:intergenic 20.0%
!!! TTTAAAACTTAGAAAAACCA+AGG + chr1_1:74290667-74290686 None:intergenic 20.0%
!!! TTGGTTTTTCTAAGTTTTAA+AGG - chr1_1:74290666-74290685 Msa0043190:intron 20.0%
!!! TGGTTTTTCTAAGTTTTAAA+GGG - chr1_1:74290667-74290686 Msa0043190:intron 20.0%
!!! AATTGTGTTCAATTTTGAAA+TGG - chr1_1:74291009-74291028 Msa0043190:CDS 20.0%
!! TAGATTTGATTGTTGATATT+CGG - chr1_1:74291230-74291249 Msa0043190:CDS 20.0%
!! AATTACAACAATTTACAAAC+AGG - chr1_1:74291692-74291711 Msa0043190:CDS 20.0%
!! ATTACAACAATTTACAAACA+GGG - chr1_1:74291693-74291712 Msa0043190:CDS 20.0%
!!! TTTTTGGTATTACTTTCTAA+TGG + chr1_1:74291750-74291769 None:intergenic 20.0%
!! GAAAGTAATACCAAAAAAAA+AGG - chr1_1:74291753-74291772 Msa0043190:intron 20.0%
!! ATTACAAAACTACCAAAAAA+TGG + chr1_1:74291959-74291978 None:intergenic 20.0%
!! TATATTTTCTTGAATCGGTT+AGG - chr1_1:74288429-74288448 Msa0043190:three_prime_UTR 25.0%
!! CTATGAATTTTTGTTAATCG+AGG - chr1_1:74288555-74288574 Msa0043190:three_prime_UTR 25.0%
!!! ATGAGATAAAGATTTTAGAG+AGG - chr1_1:74290175-74290194 Msa0043190:intron 25.0%
!!! TAAAGATTTTAGAGAGGAAA+CGG - chr1_1:74290181-74290200 Msa0043190:intron 25.0%
! TCATACAATGTCTACATTAT+AGG - chr1_1:74290514-74290533 Msa0043190:intron 25.0%
!!! ACATTATAGGAGTATTTAAG+AGG - chr1_1:74290527-74290546 Msa0043190:intron 25.0%
!!! AAAAACCAAGGTATTGATTT+TGG + chr1_1:74290655-74290674 None:intergenic 25.0%
!!! GGTTTTTCTAAGTTTTAAAG+GGG - chr1_1:74290668-74290687 Msa0043190:intron 25.0%
!!! TAAGTTTTAAAGGGGATAAA+TGG - chr1_1:74290676-74290695 Msa0043190:intron 25.0%
! TTACATTATTATGAACGTCA+AGG + chr1_1:74291160-74291179 None:intergenic 25.0%
!! ATTCAAAGTGTCAAACTTAT+GGG + chr1_1:74291859-74291878 None:intergenic 25.0%
!! AATTCAAAGTGTCAAACTTA+TGG + chr1_1:74291860-74291879 None:intergenic 25.0%
! ACATACAAATACGTCTATAT+TGG - chr1_1:74291889-74291908 Msa0043190:intron 25.0%
!!! TTGTAATATGATGTTTCTAG+TGG - chr1_1:74292024-74292043 Msa0043190:intron 25.0%
ATCTTCTTCTTCTTCTTCAT+CGG - chr1_1:74288336-74288355 Msa0043190:three_prime_UTR 30.0%
!! TCCTTGTTATGCATTTTGAT+CGG + chr1_1:74288632-74288651 None:intergenic 30.0%
TAATAATAACAAGGAGTTGC+AGG - chr1_1:74289153-74289172 Msa0043190:intron 30.0%
ACTAACAAGCAAGTCAAATT+TGG + chr1_1:74289640-74289659 None:intergenic 30.0%
! AAGGTTTTACTTCATTTGGA+AGG + chr1_1:74289676-74289695 None:intergenic 30.0%
! AAGCAAGGTTTTACTTCATT+TGG + chr1_1:74289680-74289699 None:intergenic 30.0%
GAAAAAACAACCAAACTACA+AGG + chr1_1:74289734-74289753 None:intergenic 30.0%
AACCAACAACTAGTATAAAC+TGG + chr1_1:74289794-74289813 None:intergenic 30.0%
CTGTATATGGTTTCAAATTG+CGG - chr1_1:74289924-74289943 Msa0043190:intron 30.0%
TATATAGAACTAGCAAGACT+AGG - chr1_1:74290479-74290498 Msa0043190:intron 30.0%
ACATTTATGATAGCCATGTA+TGG - chr1_1:74290589-74290608 Msa0043190:intron 30.0%
!! TTTTAAAGGGGATAAATGGT+TGG - chr1_1:74290680-74290699 Msa0043190:intron 30.0%
! TGTCACTCAATTTCTTTTCA+TGG - chr1_1:74290745-74290764 Msa0043190:intron 30.0%
GTAATGTCTTGAATCTTCAT+TGG - chr1_1:74290871-74290890 Msa0043190:intron 30.0%
TACTTCGAGATAAAGATGAA+TGG - chr1_1:74290978-74290997 Msa0043190:intron 30.0%
AAACATTAGTATGACTGTCA+AGG + chr1_1:74291064-74291083 None:intergenic 30.0%
! GTCCACTCATTGTTATTAAT+CGG + chr1_1:74291204-74291223 None:intergenic 30.0%
TTGACTCAAAGCATATACAA+CGG - chr1_1:74291644-74291663 Msa0043190:CDS 30.0%
GAGAAAAAAGAAAGACATGA+GGG + chr1_1:74291835-74291854 None:intergenic 30.0%
! TTCAAAGTGTCAAACTTATG+GGG + chr1_1:74291858-74291877 None:intergenic 30.0%
CGAATTTGATCGTAACAGAA+AGG + chr1_1:74288313-74288332 None:intergenic 35.0%
!!! CACGTTTTTTCATCGTTTTC+TGG - chr1_1:74288585-74288604 Msa0043190:three_prime_UTR 35.0%
ACCGATCAAAATGCATAACA+AGG - chr1_1:74288628-74288647 Msa0043190:three_prime_UTR 35.0%
AAACCTTGCAACACATCAAA+CGG + chr1_1:74289070-74289089 None:intergenic 35.0%
TTATTCTCAATCACACTCGT+CGG + chr1_1:74289202-74289221 None:intergenic 35.0%
ACGAGTGTGATTGAGAATAA+CGG - chr1_1:74289202-74289221 Msa0043190:intron 35.0%
! TGAGAATAACGGTGTTGAAA+CGG - chr1_1:74289213-74289232 Msa0043190:intron 35.0%
GATCTAACAGAAATGCTCTT+TGG + chr1_1:74289253-74289272 None:intergenic 35.0%
AGCATTTCTGTTAGATCCAA+TGG - chr1_1:74289256-74289275 Msa0043190:intron 35.0%
! AGCATTGTTGTTAGTTACGA+CGG + chr1_1:74289308-74289327 None:intergenic 35.0%
TACAACTGTATCAGATTGAG+TGG + chr1_1:74289368-74289387 None:intergenic 35.0%
CTGTAACAAACCTTGTAGTT+TGG - chr1_1:74289721-74289740 Msa0043190:intron 35.0%
CTCCAGTTTATACTAGTTGT+TGG - chr1_1:74289789-74289808 Msa0043190:intron 35.0%
ATGGCAAACTAGAGCTAATT+TGG + chr1_1:74289832-74289851 None:intergenic 35.0%
CAGGTTAAAATGTCACAGAA+AGG + chr1_1:74289885-74289904 None:intergenic 35.0%
AAACCATATACAGAGCACAT+TGG + chr1_1:74289917-74289936 None:intergenic 35.0%
!! AAAATTAAGTTGACGCCACA+AGG - chr1_1:74290258-74290277 Msa0043190:intron 35.0%
CAATAGCTGCAATATTGCAA+AGG - chr1_1:74290297-74290316 Msa0043190:intron 35.0%
!!! ACAACCACGGTTTTAAAATG+CGG + chr1_1:74290341-74290360 None:intergenic 35.0%
TTACAAGTAACAAGTGATGC+AGG - chr1_1:74290710-74290729 Msa0043190:intron 35.0%
TACAAGTAACAAGTGATGCA+GGG - chr1_1:74290711-74290730 Msa0043190:intron 35.0%
TTAGTATGACTGTCAAGGAA+TGG + chr1_1:74291059-74291078 None:intergenic 35.0%
TTATTATGAACGTCAAGGCA+TGG + chr1_1:74291155-74291174 None:intergenic 35.0%
! CACCGATTAATAACAATGAG+TGG - chr1_1:74291199-74291218 Msa0043190:CDS 35.0%
TGACATAGCTTTCTCTTGTT+CGG + chr1_1:74291566-74291585 None:intergenic 35.0%
AATGAAGCTGGAAAGATGAA+TGG - chr1_1:74291603-74291622 Msa0043190:CDS 35.0%
ATTCTTGAGGAGAATGTGTA+TGG - chr1_1:74291809-74291828 Msa0043190:intron 35.0%
GGAGAAAAAAGAAAGACATG+AGG + chr1_1:74291836-74291855 None:intergenic 35.0%
! TCAAAGTGTCAAACTTATGG+GGG + chr1_1:74291857-74291876 None:intergenic 35.0%
ATTGCTAACTTTGCAGAGTA+TGG + chr1_1:74291992-74292011 None:intergenic 35.0%
CTTTATCCTTACTCTGACCT+TGG - chr1_1:74288812-74288831 Msa0043190:CDS 40.0%
!! GATACAGAAGCATCAGGATA+TGG - chr1_1:74288856-74288875 Msa0043190:CDS 40.0%
!! CAACTTCTTTGGAACTTTCC+AGG + chr1_1:74288913-74288932 None:intergenic 40.0%
CTTCTGCAACTCTTTGTTCA+CGG + chr1_1:74288969-74288988 None:intergenic 40.0%
CTTGAATCTTGGAGATGGAA+AGG - chr1_1:74289096-74289115 Msa0043190:intron 40.0%
! GAAAGGAAAACTGTGCTGAT+TGG - chr1_1:74289113-74289132 Msa0043190:intron 40.0%
AACTGTATCAGATTGAGTGG+AGG + chr1_1:74289365-74289384 None:intergenic 40.0%
!! CAAGGTTTGTTACAGCTAAC+AGG + chr1_1:74289716-74289735 None:intergenic 40.0%
! TTGTTGGTTAGTAGTGTTGC+AGG - chr1_1:74289805-74289824 Msa0043190:intron 40.0%
!! ATTAGCTCTAGTTTGCCATG+AGG - chr1_1:74289833-74289852 Msa0043190:intron 40.0%
TTATGAGCACACCACAATTG+CGG + chr1_1:74289996-74290015 None:intergenic 40.0%
GCACTGCAAATTTCCATACA+TGG + chr1_1:74290605-74290624 None:intergenic 40.0%
! ATTTGCAGTGCTGTTAGTAG+TGG - chr1_1:74290614-74290633 Msa0043190:intron 40.0%
AGTCGCCAAAATCAATACCT+TGG - chr1_1:74290647-74290666 Msa0043190:intron 40.0%
ACAAGTAACAAGTGATGCAG+GGG - chr1_1:74290712-74290731 Msa0043190:intron 40.0%
!!! ATGGTTTTATCCACTGCTGT+TGG - chr1_1:74290764-74290783 Msa0043190:intron 40.0%
! TTGTTACTCACTGCTGACTA+TGG - chr1_1:74290849-74290868 Msa0043190:intron 40.0%
!! GAATCTTCATTGGTTAGCCT+TGG - chr1_1:74290881-74290900 Msa0043190:intron 40.0%
TGTTACTATGCTGCAGCAAA+AGG - chr1_1:74291279-74291298 Msa0043190:CDS 40.0%
!! AAAAGGTATTTGTGCGAGGA+GGG - chr1_1:74291296-74291315 Msa0043190:CDS 40.0%
TTGTACACAACCATCTCAAG+AGG + chr1_1:74291337-74291356 None:intergenic 40.0%
AGACTGAGCTCTGTAACAAA+TGG - chr1_1:74291371-74291390 Msa0043190:CDS 40.0%
TGTAACAAATGGCAGGAAAC+TGG - chr1_1:74291382-74291401 Msa0043190:CDS 40.0%
ATTGACAGTGGTCTCCATAA+GGG + chr1_1:74291414-74291433 None:intergenic 40.0%
AATTGACAGTGGTCTCCATA+AGG + chr1_1:74291415-74291434 None:intergenic 40.0%
AAATGGCATCTATGGCCATA+CGG + chr1_1:74291529-74291548 None:intergenic 40.0%
CTTTCCAGCTTCATTGATCT+GGG + chr1_1:74291598-74291617 None:intergenic 40.0%
TCTTTCCAGCTTCATTGATC+TGG + chr1_1:74291599-74291618 None:intergenic 40.0%
TGGAAAGATGAATGGTCTCA+TGG - chr1_1:74291611-74291630 Msa0043190:CDS 40.0%
!!! GCAAGCGTTCCCTTTTTTTT+TGG + chr1_1:74291766-74291785 None:intergenic 40.0%
AGCAAATTGAGGTCTATAGC+AGG - chr1_1:74291786-74291805 Msa0043190:intron 40.0%
TCCCAACATAACGAACCAAA+GGG - chr1_1:74291912-74291931 Msa0043190:intron 40.0%
! TCCCTTTGGTTCGTTATGTT+GGG + chr1_1:74291916-74291935 None:intergenic 40.0%
! TTCCCTTTGGTTCGTTATGT+TGG + chr1_1:74291917-74291936 None:intergenic 40.0%
AACATAACGAACCAAAGGGA+AGG - chr1_1:74291916-74291935 Msa0043190:intron 40.0%
! TTCATAGAGTACCTTCCCTT+TGG + chr1_1:74291930-74291949 None:intergenic 40.0%
TGTTCTCCGTCATCCAAAAG+CGG - chr1_1:74288656-74288675 Msa0043190:three_prime_UTR 45.0%
TCTGTTCCAAGGTCAGAGTA+AGG + chr1_1:74288821-74288840 None:intergenic 45.0%
ATGAGTCGTACTCTGTTCCA+AGG + chr1_1:74288832-74288851 None:intergenic 45.0%
!! ATGCGTGATACAGAAGCATC+AGG - chr1_1:74288850-74288869 Msa0043190:CDS 45.0%
TATGTTTCTCAGTCGTCTCC+TGG - chr1_1:74288892-74288911 Msa0043190:CDS 45.0%
CTGCAGAGCTTCAACTTCTT+TGG + chr1_1:74288924-74288943 None:intergenic 45.0%
! CAAACGGAGTTGATTGAGTC+TGG + chr1_1:74289054-74289073 None:intergenic 45.0%
ACTCCGTTTGATGTGTTGCA+AGG - chr1_1:74289064-74289083 Msa0043190:CDS 45.0%
CATCTCCAAGATTCAAGCCA+CGG + chr1_1:74289093-74289112 None:intergenic 45.0%
! ATAACGGTGTTGAAACGGAG+AGG - chr1_1:74289218-74289237 Msa0043190:intron 45.0%
AGCAAGCTTCAAGTAGCCAT+TGG + chr1_1:74289275-74289294 None:intergenic 45.0%
! TTGTTGTTAGTTACGACGGC+CGG + chr1_1:74289304-74289323 None:intergenic 45.0%
GGTAATGACACAGACAAGCA+AGG + chr1_1:74289695-74289714 None:intergenic 45.0%
! AGCTCATCTGTTTTGCCTCA+TGG + chr1_1:74289851-74289870 None:intergenic 45.0%
GTGCCAATGTGCTCTGTATA+TGG - chr1_1:74289911-74289930 Msa0043190:intron 45.0%
GCGATTGCAGACAATACCAT+GGG + chr1_1:74289967-74289986 None:intergenic 45.0%
TGCGATTGCAGACAATACCA+TGG + chr1_1:74289968-74289987 None:intergenic 45.0%
AGTGCCGTAATGAGGGAATT+GGG - chr1_1:74290038-74290057 Msa0043190:intron 45.0%
TGCACCCAATTCCCTCATTA+CGG + chr1_1:74290045-74290064 None:intergenic 45.0%
GATGTGTATTGTCGTCCTTG+TGG + chr1_1:74290276-74290295 None:intergenic 45.0%
AAACCGTGGTTGTTTGTGCT+TGG - chr1_1:74290348-74290367 Msa0043190:intron 45.0%
ACACCAAGCACAAACAACCA+CGG + chr1_1:74290354-74290373 None:intergenic 45.0%
AAGGGGATAAATGGTTGGAC+TGG - chr1_1:74290685-74290704 Msa0043190:intron 45.0%
CTTGGACACATCTTGTGCTT+GGG - chr1_1:74290899-74290918 Msa0043190:intron 45.0%
ATGACTGTCAAGGAATGGCA+AGG + chr1_1:74291054-74291073 None:intergenic 45.0%
!! CAGCAAAAGGTATTTGTGCG+AGG - chr1_1:74291292-74291311 Msa0043190:CDS 45.0%
!! CAAAAGGTATTTGTGCGAGG+AGG - chr1_1:74291295-74291314 Msa0043190:CDS 45.0%
TGAGATGGTTGTGTACAACC+AGG - chr1_1:74291339-74291358 Msa0043190:CDS 45.0%
GAGATGGTTGTGTACAACCA+GGG - chr1_1:74291340-74291359 Msa0043190:CDS 45.0%
AGATGGTTGTGTACAACCAG+GGG - chr1_1:74291341-74291360 Msa0043190:CDS 45.0%
TGAGCTCTGTAACAAATGGC+AGG - chr1_1:74291375-74291394 Msa0043190:CDS 45.0%
TGTCAATTCGCTCATGGCAT+TGG - chr1_1:74291427-74291446 Msa0043190:CDS 45.0%
GTCAATTCGCTCATGGCATT+GGG - chr1_1:74291428-74291447 Msa0043190:CDS 45.0%
TCAATTCGCTCATGGCATTG+GGG - chr1_1:74291429-74291448 Msa0043190:CDS 45.0%
!! AGACCTCAGTTTTGTAGCGT+GGG + chr1_1:74291477-74291496 None:intergenic 45.0%
AATGGCATCTATGGCCATAC+GGG + chr1_1:74291528-74291547 None:intergenic 45.0%
! CATGACGGAAATGGCATCTA+TGG + chr1_1:74291537-74291556 None:intergenic 45.0%
CTTGTTCGGTAAGTGCATGA+CGG + chr1_1:74291552-74291571 None:intergenic 45.0%
TAAGCCCAGATCAATGAAGC+TGG - chr1_1:74291591-74291610 Msa0043190:CDS 45.0%
GGTCTATAGCAGGATTCTTG+AGG - chr1_1:74291796-74291815 Msa0043190:intron 45.0%
GTCCCAACATAACGAACCAA+AGG - chr1_1:74291911-74291930 Msa0043190:intron 45.0%
!!! ATTTACTATTATTTATTTTA+TGG + chr1_1:74290219-74290238 None:intergenic 5.0%
CGAGAAGCTTCTGCTTGTGA+AGG - chr1_1:74288264-74288283 Msa0043190:three_prime_UTR 50.0%
GAAGCTTCTGCTTGTGAAGG+TGG - chr1_1:74288267-74288286 Msa0043190:three_prime_UTR 50.0%
!! CCGTAACCGCTTTTGGATGA+CGG + chr1_1:74288665-74288684 None:intergenic 50.0%
CCGTCATCCAAAAGCGGTTA+CGG - chr1_1:74288662-74288681 Msa0043190:three_prime_UTR 50.0%
TCCAAAAGCGGTTACGGCAT+CGG - chr1_1:74288668-74288687 Msa0043190:three_prime_UTR 50.0%
GTACAACGAAGCAAACACGC+CGG + chr1_1:74288726-74288745 None:intergenic 50.0%
AGAAGTTGAAGCTCTGCAGC+AGG - chr1_1:74288925-74288944 Msa0043190:CDS 50.0%
GAAGCTCTGCAGCAGGAAAA+CGG - chr1_1:74288932-74288951 Msa0043190:CDS 50.0%
GCAACTCTTTGTTCACGGCA+CGG + chr1_1:74288964-74288983 None:intergenic 50.0%
! TCGCTGGAGAACCGATTCAA+TGG - chr1_1:74289013-74289032 Msa0043190:CDS 50.0%
! CTGGAGAACCGATTCAATGG+TGG - chr1_1:74289016-74289035 Msa0043190:CDS 50.0%
! GAGAACCGATTCAATGGTGG+CGG - chr1_1:74289019-74289038 Msa0043190:CDS 50.0%
AGGATCCGCCACCATTGAAT+CGG + chr1_1:74289027-74289046 None:intergenic 50.0%
AGTTGATTGAGTCTGGACGG+AGG + chr1_1:74289047-74289066 None:intergenic 50.0%
! CGGAGTTGATTGAGTCTGGA+CGG + chr1_1:74289050-74289069 None:intergenic 50.0%
GATGTGTTGCAAGGTTTCCG+TGG - chr1_1:74289073-74289092 Msa0043190:CDS 50.0%
GGTTTCCGTGGCTTGAATCT+TGG - chr1_1:74289085-74289104 Msa0043190:intron 50.0%
CGTGGCTTGAATCTTGGAGA+TGG - chr1_1:74289091-74289110 Msa0043190:intron 50.0%
CGTCGGACTCTCATCAGATT+CGG + chr1_1:74289185-74289204 None:intergenic 50.0%
AGCACATTGGCACAGAACAC+AGG + chr1_1:74289904-74289923 None:intergenic 50.0%
ATCGCATCAAGCCGCAATTG+TGG - chr1_1:74289982-74290001 Msa0043190:intron 50.0%
CAGTGCCGTAATGAGGGAAT+TGG - chr1_1:74290037-74290056 Msa0043190:intron 50.0%
GAAAGCTACACCAACAGCAG+TGG + chr1_1:74290777-74290796 None:intergenic 50.0%
CCAAGCACAAGATGTGTCCA+AGG + chr1_1:74290901-74290920 None:intergenic 50.0%
CCTTGGACACATCTTGTGCT+TGG - chr1_1:74290898-74290917 Msa0043190:intron 50.0%
AGAGGAAGAGCCTCTTGAGA+TGG - chr1_1:74291324-74291343 Msa0043190:CDS 50.0%
GAAACTGGCACATGCCCTTA+TGG - chr1_1:74291397-74291416 Msa0043190:CDS 50.0%
GACCACTGTCAATTCGCTCA+TGG - chr1_1:74291421-74291440 Msa0043190:CDS 50.0%
TGCCATGAGCGAATTGACAG+TGG + chr1_1:74291426-74291445 None:intergenic 50.0%
!! CAGACCTCAGTTTTGTAGCG+TGG + chr1_1:74291478-74291497 None:intergenic 50.0%
GCTACAAAACTGAGGTCTGC+AGG - chr1_1:74291479-74291498 Msa0043190:CDS 50.0%
CAAAACTGAGGTCTGCAGGA+TGG - chr1_1:74291483-74291502 Msa0043190:CDS 50.0%
! CGGTAAGTGCATGACGGAAA+TGG + chr1_1:74291546-74291565 None:intergenic 50.0%
GGAACGCTTGCAGCAAATTG+AGG - chr1_1:74291775-74291794 Msa0043190:intron 50.0%
GATCTTCCATCATCGCTCGC+CGG - chr1_1:74288761-74288780 Msa0043190:exon 55.0%
CCAGCGAAGCTTGAACGAGA+AGG + chr1_1:74289000-74289019 None:intergenic 55.0%
CCTTCTCGTTCAAGCTTCGC+TGG - chr1_1:74288997-74289016 Msa0043190:CDS 55.0%
TTGTTAGTTACGACGGCCGG+AGG + chr1_1:74289301-74289320 None:intergenic 55.0%
! AGCGAGTAGCGCTTTTGGTG+CGG + chr1_1:74289333-74289352 None:intergenic 55.0%
! AGATTGAGTGGAGGAAGCGC+GGG + chr1_1:74289356-74289375 None:intergenic 55.0%
CAGATTGAGTGGAGGAAGCG+CGG + chr1_1:74289357-74289376 None:intergenic 55.0%
GACAATACCATGGGCGCATC+AGG + chr1_1:74289958-74289977 None:intergenic 55.0%
ACGTCGCAGTGCCGTAATGA+GGG - chr1_1:74290031-74290050 Msa0043190:intron 55.0%
AAAGGCAGCGACTGCAACAG+CGG - chr1_1:74290315-74290334 Msa0043190:intron 55.0%
!!! GCGGCCGCATTTTAAAACCG+TGG - chr1_1:74290334-74290353 Msa0043190:intron 55.0%
CTGTCAAGGAATGGCAAGGC+AGG + chr1_1:74291050-74291069 None:intergenic 55.0%
GCTCAGTCTTGAACATCCCC+TGG + chr1_1:74291360-74291379 None:intergenic 55.0%
!! CAGTTTTGTAGCGTGGGTGG+CGG + chr1_1:74291471-74291490 None:intergenic 55.0%
!! CCTCAGTTTTGTAGCGTGGG+TGG + chr1_1:74291474-74291493 None:intergenic 55.0%
CCACCCACGCTACAAAACTG+AGG - chr1_1:74291471-74291490 Msa0043190:CDS 55.0%
TCTGCAGGATGGTCCTTGCT+GGG - chr1_1:74291494-74291513 Msa0043190:CDS 55.0%
! GCCGATGCCGTAACCGCTTT+TGG + chr1_1:74288672-74288691 None:intergenic 60.0%
GGCGTTCGACTGCATGTGAC+CGG + chr1_1:74288705-74288724 None:intergenic 60.0%
GGTCACATGCAGTCGAACGC+CGG - chr1_1:74288704-74288723 Msa0043190:three_prime_UTR 60.0%
CTGTTTCCGGCGAGCGATGA+TGG + chr1_1:74288770-74288789 None:intergenic 60.0%
CTCGCCGGAAACAGCAGCAA+CGG - chr1_1:74288776-74288795 Msa0043190:CDS 60.0%
! CTTGAAGCTTGCTCCGCCTC+CGG - chr1_1:74289282-74289301 Msa0043190:intron 60.0%
TTAGTTACGACGGCCGGAGG+CGG + chr1_1:74289298-74289317 None:intergenic 60.0%
TGCATCACCTGATGCGCCCA+TGG - chr1_1:74289948-74289967 Msa0043190:intron 60.0%
CTCATTACGGCACTGCGACG+TGG + chr1_1:74290032-74290051 None:intergenic 60.0%
CACGTCGCAGTGCCGTAATG+AGG - chr1_1:74290030-74290049 Msa0043190:intron 60.0%
TGTGCGAGGAGGGCAGAAAG+AGG - chr1_1:74291306-74291325 Msa0043190:CDS 60.0%
GTCTGCAGGATGGTCCTTGC+TGG - chr1_1:74291493-74291512 Msa0043190:CDS 60.0%
CTGCAGGATGGTCCTTGCTG+GGG - chr1_1:74291495-74291514 Msa0043190:CDS 60.0%
ACGGGCATACAACCCCAGCA+AGG + chr1_1:74291510-74291529 None:intergenic 60.0%
GCTGGGGTTGTATGCCCGTA+TGG - chr1_1:74291511-74291530 Msa0043190:CDS 60.0%
!! GGCATCGGCGTCAACAACGC+CGG - chr1_1:74288683-74288702 Msa0043190:three_prime_UTR 65.0%
GCCGGAAACAGCAGCAACGG+CGG - chr1_1:74288779-74288798 Msa0043190:CDS 65.0%
!! GCCGCCGTTGCTGCTGTTTC+CGG + chr1_1:74288783-74288802 None:intergenic 65.0%
GGAAACAGCAGCAACGGCGG+CGG - chr1_1:74288782-74288801 Msa0043190:CDS 65.0%
! GCGGGAGCGAGTAGCGCTTT+TGG + chr1_1:74289338-74289357 None:intergenic 65.0%
!! AGCGTGGGTGGCGGATCACT+GGG + chr1_1:74291462-74291481 None:intergenic 65.0%
!! TAGCGTGGGTGGCGGATCAC+TGG + chr1_1:74291463-74291482 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 74288208 74292182 74288208 ID=Msa0043190;Name=Msa0043190
chr1_1 mRNA 74288208 74292182 74288208 ID=Msa0043190-mRNA-1;Parent=Msa0043190;Name=Msa0043190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=169|1|1|1|0.5|0.66|3|561|357
chr1_1 exon 74288208 74289095 74288208 ID=Msa0043190-mRNA-1:exon:25023;Parent=Msa0043190-mRNA-1
chr1_1 exon 74291006 74291771 74291006 ID=Msa0043190-mRNA-1:exon:25022;Parent=Msa0043190-mRNA-1
chr1_1 exon 74292033 74292182 74292033 ID=Msa0043190-mRNA-1:exon:25021;Parent=Msa0043190-mRNA-1
chr1_1 five_prime_UTR 74292033 74292182 74292033 ID=Msa0043190-mRNA-1:five_prime_utr;Parent=Msa0043190-mRNA-1
chr1_1 five_prime_UTR 74291753 74291771 74291753 ID=Msa0043190-mRNA-1:five_prime_utr;Parent=Msa0043190-mRNA-1
chr1_1 CDS 74291006 74291752 74291006 ID=Msa0043190-mRNA-1:cds;Parent=Msa0043190-mRNA-1
chr1_1 CDS 74288769 74289095 74288769 ID=Msa0043190-mRNA-1:cds;Parent=Msa0043190-mRNA-1
chr1_1 three_prime_UTR 74288208 74288768 74288208 ID=Msa0043190-mRNA-1:three_prime_utr;Parent=Msa0043190-mRNA-1
Gene Sequence

>Msa0043190

ATGCATAACAAGGACGTTTGTTCTCCGTCATCCAAAAGCGGTTACGGCATCGGCGTCAACAACGCCGGTCACATGCAGTCGAACGCCGGCGTGTTTGCTTCGTTGTACTCTGCTCTGAGTAATGATCTTCCATCATCGCTCGCCGGAAACAGCAGCAACGGCGGCGGATTTTCGCTTTATCCTTACTCTGACCTTGGAACAGAGTACGACTCATGCGTGATACAGAAGCATCAGGATATGGTGAATCGTCACAGTATGTTTCTCAGTCGTCTCCTGGAAAGTTCCAAAGAAGTTGAAGCTCTGCAGCAGGAAAACGGACAGCTCCGTGCCGTGAACAAAGAGTTGCAGAAGAATCTGAACCTTCTCGTTCAAGCTTCGCTGGAGAACCGATTCAATGGTGGCGGATCCTCCGTCCAGACTCAATCAACTCCGTTTGATGTGTTGCAAGGTTTCCGTGGCTTGAATCTTGGAGATGGAAAGGAAAACTGTGCTGATTGGAATAGCAATAACATCAATAATAATAACAAGGAGTTGCAGGAAGCTTCCGAATCTGATGAGAGTCCGACGAGTGTGATTGAGAATAACGGTGTTGAAACGGAGAGGTTCTCGCTTCCAAAGAGCATTTCTGTTAGATCCAATGGCTACTTGAAGCTTGCTCCGCCTCCGGCCGTCGTAACTAACAACAATGCTTGCCGCACCAAAAGCGCTACTCGCTCCCGCGCTTCCTCCACTCAATCTGATACAGTTCAAAAGGTATTTGTGCGAGGAGGGCAGAAAGAGGAAGAGCCTCTTGAGATGGTTGTGTACAACCAGGGGATGTTCAAGACTGAGCTCTGTAACAAATGGCAGGAAACTGGCACATGCCCTTATGGAGACCACTGTCAATTCGCTCATGGCATTGGGGAGCTTCGCCCAGTGATCCGCCACCCACGCTACAAAACTGAGGTCTGCAGGATGGTCCTTGCTGGGGTTGTATGCCCGTATGGCCATAGATGCCATTTCCGTCATGCACTTACCGAACAAGAGAAAGCTATGTCACAATCTAAGCCCAGATCAATGAAGCTGGAAAGATGA
Protein sequence

>Msa0043190

MHNKDVCSPSSKSGYGIGVNNAGHMQSNAGVFASLYSALSNDLPSSLAGNSSNGGGFSLYPYSDLGTEYDSCVIQKHQDMVNRHSMFLSRLLESSKEVEALQQENGQLRAVNKELQKNLNLLVQASLENRFNGGGSSVQTQSTPFDVLQGFRGLNLGDGKENCADWNSNNINNNNKELQEASESDESPTSVIENNGVETERFSLPKSISVRSNGYLKLAPPPAVVTNNNACRTKSATRSRASSTQSDTVQKVFVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAMSQSKPRSMKLER*