Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050790 | XP_013447669.1 | 97.680 | 431 | 10 | 0 | 1 | 431 | 1 | 431 | 0.0 | 876 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050790 | sp|Q9LFW3|COBL4_ARATH | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050790 | A0A072TW67 | 97.680 | 431 | 10 | 0 | 1 | 431 | 1 | 431 | 0.0 | 876 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043190 | Msa1050790 | 0.863948 | 1.728092e-64 | -8.615850e-47 |
| Msa0089830 | Msa1050790 | 0.833409 | 5.423340e-56 | -8.615850e-47 |
| Msa0137020 | Msa1050790 | 0.845536 | 3.819755e-59 | -8.615850e-47 |
| Msa0980580 | Msa1050790 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
| Msa1050790 | Msa1098190 | 0.943372 | 1.354558e-102 | -8.615850e-47 |
| Msa1050790 | Msa1138230 | 0.924085 | 1.127747e-89 | -8.615850e-47 |
| Msa1050790 | Msa1361830 | 0.832193 | 1.086750e-55 | -8.615850e-47 |
| Msa0532510 | Msa1050790 | 0.808139 | 3.586015e-50 | -8.615850e-47 |
| Msa0548590 | Msa1050790 | 0.817919 | 2.568596e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050790 | MtrunA17_Chr7g0219931 | 97.680 | 431 | 10 | 0 | 1 | 431 | 1 | 431 | 0.0 | 876 |
| Msa1050790 | MtrunA17_Chr6g0455411 | 84.687 | 431 | 66 | 0 | 1 | 431 | 1 | 431 | 0.0 | 780 |
| Msa1050790 | MtrunA17_Chr2g0308371 | 69.118 | 408 | 121 | 2 | 7 | 410 | 13 | 419 | 0.0 | 632 |
| Msa1050790 | MtrunA17_Chr7g0219921 | 68.246 | 422 | 130 | 1 | 14 | 431 | 22 | 443 | 0.0 | 626 |
| Msa1050790 | MtrunA17_Chr2g0308381 | 66.820 | 434 | 136 | 2 | 3 | 428 | 18 | 451 | 0.0 | 622 |
| Msa1050790 | MtrunA17_Chr6g0455401 | 65.197 | 431 | 145 | 2 | 4 | 430 | 13 | 442 | 0.0 | 613 |
| Msa1050790 | MtrunA17_Chr6g0455391 | 65.239 | 397 | 127 | 3 | 17 | 409 | 25 | 414 | 0.0 | 558 |
| Msa1050790 | MtrunA17_Chr2g0333731 | 57.794 | 417 | 171 | 2 | 19 | 430 | 28 | 444 | 0.0 | 533 |
| Msa1050790 | MtrunA17_Chr3g0145441 | 42.630 | 441 | 219 | 11 | 3 | 427 | 33 | 455 | 6.58e-125 | 370 |
| Msa1050790 | MtrunA17_Chr2g0294901 | 28.369 | 423 | 248 | 17 | 26 | 399 | 208 | 624 | 2.28e-36 | 141 |
| Msa1050790 | MtrunA17_Chr2g0319581 | 26.269 | 453 | 265 | 18 | 27 | 426 | 226 | 662 | 8.04e-32 | 128 |
| Msa1050790 | MtrunA17_Chr5g0394101 | 26.991 | 452 | 265 | 21 | 27 | 430 | 26 | 460 | 2.98e-31 | 124 |
| Msa1050790 | MtrunA17_Chr4g0068011 | 26.573 | 429 | 247 | 20 | 26 | 399 | 204 | 619 | 4.10e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050790 | AT5G15630.1 | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Msa1050790 | AT5G15630.3 | 82.828 | 396 | 67 | 1 | 36 | 431 | 1 | 395 | 0.0 | 708 |
| Msa1050790 | AT5G15630.4 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1050790 | AT5G15630.2 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1050790 | AT5G60920.1 | 65.882 | 425 | 139 | 2 | 1 | 419 | 18 | 442 | 0.0 | 613 |
| Msa1050790 | AT3G29810.1 | 66.748 | 412 | 135 | 2 | 19 | 430 | 28 | 437 | 0.0 | 609 |
| Msa1050790 | AT3G02210.1 | 66.667 | 417 | 131 | 4 | 19 | 428 | 33 | 448 | 0.0 | 605 |
| Msa1050790 | AT5G15630.5 | 86.378 | 323 | 44 | 0 | 17 | 339 | 18 | 340 | 0.0 | 603 |
| Msa1050790 | AT5G60920.2 | 67.342 | 395 | 123 | 2 | 31 | 419 | 1 | 395 | 0.0 | 586 |
| Msa1050790 | AT1G09790.2 | 50.856 | 409 | 193 | 5 | 3 | 407 | 8 | 412 | 9.10e-148 | 427 |
| Msa1050790 | AT1G09790.1 | 52.152 | 395 | 181 | 5 | 17 | 407 | 33 | 423 | 2.11e-146 | 424 |
| Msa1050790 | AT5G60950.1 | 53.333 | 210 | 87 | 5 | 1 | 207 | 1 | 202 | 1.35e-68 | 217 |
| Msa1050790 | AT4G16120.1 | 26.651 | 424 | 253 | 17 | 26 | 399 | 216 | 631 | 8.76e-36 | 140 |
| Msa1050790 | AT5G49270.1 | 25.764 | 458 | 273 | 19 | 27 | 428 | 216 | 662 | 8.02e-35 | 137 |
| Msa1050790 | AT4G27110.1 | 25.778 | 450 | 274 | 18 | 26 | 428 | 218 | 654 | 3.61e-30 | 123 |
| Msa1050790 | AT3G20580.1 | 25.821 | 457 | 270 | 18 | 27 | 430 | 229 | 669 | 3.95e-29 | 120 |
| Msa1050790 | AT3G16860.1 | 25.439 | 456 | 273 | 21 | 26 | 430 | 209 | 648 | 4.32e-29 | 120 |
Find 131 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGAAGTAGACTCTTCT+AGG | 0.204492 | 7_2:+16719255 | None:intergenic |
| CCCTACCATGTCTAGGAATT+TGG | 0.235761 | 7_2:+16720077 | None:intergenic |
| ACATTCACAGGTGAAGAATT+AGG | 0.246801 | 7_2:+16719189 | None:intergenic |
| ATAGATTGAATTATTCTCTT+TGG | 0.265682 | 7_2:-16719918 | Msa1050790:CDS |
| GCCAAGAGAGTGAAATTCTT+AGG | 0.266873 | 7_2:+16721237 | None:intergenic |
| ACTACAATCTTATACAAATA+AGG | 0.271232 | 7_2:-16722381 | Msa1050790:five_prime_UTR |
| GATGACACTGGTATGTTCTA+TGG | 0.291498 | 7_2:-16719393 | Msa1050790:CDS |
| TCATTATGTGCCGGTACATT+TGG | 0.302315 | 7_2:+16721556 | None:intergenic |
| TGGTTCTCTTGCTAGCTCTT+TGG | 0.310873 | 7_2:-16719137 | Msa1050790:CDS |
| AATGGTTCATTGTCTCTCTT+TGG | 0.317826 | 7_2:+16720045 | None:intergenic |
| GGGAGGTAAGGGTAGGTATC+AGG | 0.323587 | 7_2:+16719210 | None:intergenic |
| AAACTTACTTATGGATTGAT+AGG | 0.325256 | 7_2:+16719822 | None:intergenic |
| CACATGCCAGTGTACCCTAA+TGG | 0.336728 | 7_2:+16719996 | None:intergenic |
| ATTCTTCAATGATCTGTTGA+TGG | 0.346271 | 7_2:-16719364 | Msa1050790:CDS |
| ACATGCCAGTGTACCCTAAT+GGG | 0.355418 | 7_2:+16719997 | None:intergenic |
| TGACACAATTCTTCTTGTTC+TGG | 0.356305 | 7_2:+16720696 | None:intergenic |
| TGAGTGACATTGTTAAGATT+TGG | 0.358767 | 7_2:+16719877 | None:intergenic |
| CCATCATATGTGCCCCATTA+GGG | 0.375987 | 7_2:-16720010 | Msa1050790:CDS |
| TTTGAGAATTGTTGATTGTA+AGG | 0.376883 | 7_2:+16721372 | None:intergenic |
| ACTCTCTTGGCTCCTGGACC+TGG | 0.379010 | 7_2:-16721225 | Msa1050790:CDS |
| AGTAATTGTTGAATTATAGA+AGG | 0.381462 | 7_2:+16720745 | None:intergenic |
| ACGGAAACATAACGATCAAA+TGG | 0.386008 | 7_2:-16722128 | Msa1050790:CDS |
| CCCTAAGAATTTCACTCTCT+TGG | 0.388760 | 7_2:-16721238 | Msa1050790:CDS |
| GCATGTGAAGACCAACTATA+AGG | 0.392920 | 7_2:-16719980 | Msa1050790:CDS |
| ATGAATCCGGGATGGACATT+AGG | 0.393954 | 7_2:-16721537 | Msa1050790:CDS |
| TATAGTTGCGTATGATCCTT+TGG | 0.397464 | 7_2:-16722157 | Msa1050790:intron |
| CCCATCATATGTGCCCCATT+AGG | 0.397500 | 7_2:-16720011 | Msa1050790:CDS |
| TCCTCGGAATCCGCAATAAC+AGG | 0.398952 | 7_2:-16719053 | Msa1050790:three_prime_UTR |
| CTTAAGAAGAATTCTCTTTG+AGG | 0.402882 | 7_2:+16722447 | None:intergenic |
| CATTCACAGGTGAAGAATTA+GGG | 0.411850 | 7_2:+16719190 | None:intergenic |
| CCCTAATGGGGCACATATGA+TGG | 0.423756 | 7_2:+16720010 | None:intergenic |
| CAGCTTGTCCGACACTAACT+TGG | 0.425727 | 7_2:+16721286 | None:intergenic |
| GGGCTAAGAAAGAAGTTATA+TGG | 0.429585 | 7_2:-16721506 | Msa1050790:CDS |
| AATTTCACTCTCTTGGCTCC+TGG | 0.429983 | 7_2:-16721231 | Msa1050790:CDS |
| TTTCACATGACAATTCAATC+TGG | 0.431383 | 7_2:+16719098 | None:intergenic |
| CCTAGAAGAGTCTACTTCAA+TGG | 0.447276 | 7_2:-16719255 | Msa1050790:CDS |
| TTCTAGGAAATGCCCATCCT+TGG | 0.450855 | 7_2:+16719271 | None:intergenic |
| GTACCGGCACATAATGAATC+CGG | 0.453105 | 7_2:-16721550 | Msa1050790:CDS |
| AAGGCACATACTCAAGCAAT+GGG | 0.457216 | 7_2:-16722313 | Msa1050790:exon |
| TTGATCGTTATGTTTCCGTT+AGG | 0.458263 | 7_2:+16722132 | None:intergenic |
| CGGAAACATAACGATCAAAT+GGG | 0.463111 | 7_2:-16722127 | Msa1050790:CDS |
| AAATTATGATAATATTCTGC+AGG | 0.476800 | 7_2:+16722349 | None:intergenic |
| AATGATCTGTTGATGGAAGC+TGG | 0.476907 | 7_2:-16719357 | Msa1050790:CDS |
| GTGAAGAATTAGGGAGGTAA+GGG | 0.479660 | 7_2:+16719199 | None:intergenic |
| AGACCAACTATAAGGACTAT+TGG | 0.483874 | 7_2:-16719972 | Msa1050790:CDS |
| GGTGAAGAATTAGGGAGGTA+AGG | 0.486426 | 7_2:+16719198 | None:intergenic |
| CCAATGAGAAAATGAATGCT+TGG | 0.488052 | 7_2:+16719157 | None:intergenic |
| CCAAGAGAGTGAAATTCTTA+GGG | 0.492055 | 7_2:+16721238 | None:intergenic |
| CAATTCTCAAACTGTTGTAA+AGG | 0.499405 | 7_2:-16721360 | Msa1050790:CDS |
| CAAGTTAGTGTCGGACAAGC+TGG | 0.500591 | 7_2:-16721285 | Msa1050790:CDS |
| TCTCTTTGAGGTTCAAGTGA+TGG | 0.503965 | 7_2:+16722459 | None:intergenic |
| AGTCTCTTATTCAAATTCCA+TGG | 0.505988 | 7_2:-16722426 | Msa1050790:five_prime_UTR |
| CATTCACACTCAACCAAGGA+TGG | 0.509638 | 7_2:-16719284 | Msa1050790:CDS |
| AGGTGGAGTTGTAGCAGCAT+GGG | 0.513354 | 7_2:-16721340 | Msa1050790:CDS |
| GAAAGAAGTTATATGGTCAA+TGG | 0.516208 | 7_2:-16721499 | Msa1050790:CDS |
| AAGCCAGGTATTGTTATCCT+CGG | 0.516455 | 7_2:-16719069 | Msa1050790:three_prime_UTR |
| AAATGAATGCTTGGAAGTTG+AGG | 0.520645 | 7_2:+16719166 | None:intergenic |
| AAAGCTGAAACTGCTGATGA+AGG | 0.521395 | 7_2:+16721309 | None:intergenic |
| GTCTTTCATACCTGTTATTG+CGG | 0.526525 | 7_2:+16719043 | None:intergenic |
| CCTGGACCTGGCTATACTTG+TGG | 0.535517 | 7_2:-16721213 | Msa1050790:CDS |
| GTGGAAGGAACAATCTTAGC+AGG | 0.535993 | 7_2:+16721189 | None:intergenic |
| AAGGTGGAGTTGTAGCAGCA+TGG | 0.537097 | 7_2:-16721341 | Msa1050790:CDS |
| ACCTGTTATTGCGGATTCCG+AGG | 0.545949 | 7_2:+16719052 | None:intergenic |
| CCTTGTCCTTCTTGTGCATG+TGG | 0.546982 | 7_2:-16720722 | Msa1050790:CDS |
| TCTCCAATAGTCCTTATAGT+TGG | 0.547359 | 7_2:+16719969 | None:intergenic |
| CCAAATTCCTAGACATGGTA+GGG | 0.547458 | 7_2:-16720077 | Msa1050790:CDS |
| GGAGATTGCTCTAAATTCAA+AGG | 0.547885 | 7_2:-16721453 | Msa1050790:CDS |
| GGGAGAAGGTCTACAACTGT+TGG | 0.548912 | 7_2:+16721402 | None:intergenic |
| TACTAAGTGCTTGAGTCTTG+CGG | 0.549741 | 7_2:+16721142 | None:intergenic |
| CCACAAGTATAGCCAGGTCC+AGG | 0.550373 | 7_2:+16721213 | None:intergenic |
| AAAGGCACATACTCAAGCAA+TGG | 0.551615 | 7_2:-16722314 | Msa1050790:exon |
| ATGTTTCCGTTAGGATCCAA+AGG | 0.555246 | 7_2:+16722141 | None:intergenic |
| ATCCCGGATTCATTATGTGC+CGG | 0.555425 | 7_2:+16721547 | None:intergenic |
| TGTTGATTGTAAGGTACACC+AGG | 0.555754 | 7_2:+16721381 | None:intergenic |
| GACCATCCTAATGTCCATCC+CGG | 0.556854 | 7_2:+16721531 | None:intergenic |
| GACAAAGATACACAACAACT+TGG | 0.559821 | 7_2:+16720770 | None:intergenic |
| TTCTATTTGATGCAGTGACA+TGG | 0.562387 | 7_2:-16720835 | Msa1050790:intron |
| TCAGCTCAATGCTATAACCA+TGG | 0.562594 | 7_2:+16722409 | None:intergenic |
| TATTAGAGATAGAATAGCAG+AGG | 0.563686 | 7_2:+16718855 | None:intergenic |
| GATGGACATTAGGATGGTCA+TGG | 0.563833 | 7_2:-16721527 | Msa1050790:CDS |
| TACCGGCACATAATGAATCC+GGG | 0.564236 | 7_2:-16721549 | Msa1050790:CDS |
| TCAAATGGGATGTTGTGTCT+TGG | 0.564466 | 7_2:-16722113 | Msa1050790:CDS |
| TGGAAGTTGAGGACATTCAC+AGG | 0.567315 | 7_2:+16719177 | None:intergenic |
| TTCTCAAACTGTTGTAAAGG+TGG | 0.567727 | 7_2:-16721357 | Msa1050790:CDS |
| TATGTAACCCTACCATGTCT+AGG | 0.570312 | 7_2:+16720070 | None:intergenic |
| AAGCTGAAACTGCTGATGAA+GGG | 0.572187 | 7_2:+16721310 | None:intergenic |
| GCAGGACCACAAGTATAGCC+AGG | 0.572292 | 7_2:+16721207 | None:intergenic |
| CCTAATGGGGCACATATGAT+GGG | 0.574026 | 7_2:+16720011 | None:intergenic |
| TCTGATTGAACATTTCCACT+TGG | 0.576717 | 7_2:+16719333 | None:intergenic |
| GAAGTTATATGGTCAATGGT+AGG | 0.576968 | 7_2:-16721495 | Msa1050790:CDS |
| AGAATTAGGGAGGTAAGGGT+AGG | 0.577816 | 7_2:+16719203 | None:intergenic |
| CTTATCCGTGGTGAGGAAAG+TGG | 0.578365 | 7_2:+16721167 | None:intergenic |
| AATTATGATAATATTCTGCA+GGG | 0.587027 | 7_2:+16722350 | None:intergenic |
| TCAGCTTTCCAAGTTAGTGT+CGG | 0.590717 | 7_2:-16721294 | Msa1050790:CDS |
| ACAGTTGTAGACCTTCTCCC+TGG | 0.591273 | 7_2:-16721399 | Msa1050790:CDS |
| AGTCTTGCGGCGCTTATCCG+TGG | 0.593707 | 7_2:+16721155 | None:intergenic |
| TCCAAATTCCTAGACATGGT+AGG | 0.594448 | 7_2:-16720078 | Msa1050790:CDS |
| TGAGCAATTTCCAAATGTAC+CGG | 0.595133 | 7_2:-16721566 | Msa1050790:CDS |
| TAATTTGATAACATCATCAA+AGG | 0.595516 | 7_2:-16722332 | Msa1050790:five_prime_UTR |
| ATGGATTGATAGGCAAGCAA+AGG | 0.600447 | 7_2:+16719832 | None:intergenic |
| TGATGGGTACACTGCAGCAA+TGG | 0.602343 | 7_2:+16720027 | None:intergenic |
| AAGAAATTGTGAGTATGTGC+AGG | 0.603018 | 7_2:+16720805 | None:intergenic |
| TTCCACCACTTTCCTCACCA+CGG | 0.606067 | 7_2:-16721172 | Msa1050790:CDS |
| GGATCTCAAACAACTGAGCA+AGG | 0.609506 | 7_2:-16721474 | Msa1050790:CDS |
| TAAGGGTAGGTATCAGGTGA+AGG | 0.609655 | 7_2:+16719216 | None:intergenic |
| ATTCCGAGGATAACAATACC+TGG | 0.611200 | 7_2:+16719066 | None:intergenic |
| TGTAAGGTACACCAGGGAGA+AGG | 0.612287 | 7_2:+16721388 | None:intergenic |
| GGCACATAATGAATCCGGGA+TGG | 0.619121 | 7_2:-16721545 | Msa1050790:CDS |
| TATGATCCTTTGGATCCTAA+CGG | 0.620795 | 7_2:-16722147 | Msa1050790:CDS |
| TGGCAGCCACATGCACAAGA+AGG | 0.621914 | 7_2:+16720716 | None:intergenic |
| ATCCGGGATGGACATTAGGA+TGG | 0.625045 | 7_2:-16721533 | Msa1050790:CDS |
| GTTGTGTCTTGGACAGCAGA+TGG | 0.625701 | 7_2:-16722102 | Msa1050790:CDS |
| ATGGTTATAGCATTGAGCTG+AGG | 0.631417 | 7_2:-16722407 | Msa1050790:five_prime_UTR |
| ATTCACACTCAACCAAGGAT+GGG | 0.632798 | 7_2:-16719283 | Msa1050790:CDS |
| ATGGACATTAGGATGGTCAT+GGG | 0.635614 | 7_2:-16721526 | Msa1050790:CDS |
| TGCGGCGCTTATCCGTGGTG+AGG | 0.638044 | 7_2:+16721160 | None:intergenic |
| GTGGTGAGGAAAGTGGTGGA+AGG | 0.649781 | 7_2:+16721174 | None:intergenic |
| TCACTCCAAATTCCTAGACA+TGG | 0.655074 | 7_2:-16720082 | Msa1050790:CDS |
| GGTGGAGTTGTAGCAGCATG+GGG | 0.655728 | 7_2:-16721339 | Msa1050790:CDS |
| AGTGCTTCTTCAAAAGAACA+AGG | 0.656475 | 7_2:-16719310 | Msa1050790:CDS |
| CATGCCAGTGTACCCTAATG+GGG | 0.668279 | 7_2:+16719998 | None:intergenic |
| GAAACATTCACACTCAACCA+AGG | 0.672658 | 7_2:-16719288 | Msa1050790:CDS |
| CCACATGCACAAGAAGGACA+AGG | 0.673507 | 7_2:+16720722 | None:intergenic |
| ATCCGTGGTGAGGAAAGTGG+TGG | 0.681616 | 7_2:+16721170 | None:intergenic |
| AACAGGTATGAAAGACTCTG+AGG | 0.685921 | 7_2:-16719036 | Msa1050790:three_prime_UTR |
| TTGATGGAAGCTGGACCAAG+TGG | 0.686970 | 7_2:-16719348 | Msa1050790:CDS |
| GTTGATTGTAAGGTACACCA+GGG | 0.694046 | 7_2:+16721382 | None:intergenic |
| TTGGACAGCAGATGGCTATG+TGG | 0.698211 | 7_2:-16722094 | Msa1050790:intron |
| ATGTTGTATACAGATGACAC+TGG | 0.702156 | 7_2:-16719405 | Msa1050790:intron |
| TCACAGGTGAAGAATTAGGG+AGG | 0.715117 | 7_2:+16719193 | None:intergenic |
| AGGCACATACTCAAGCAATG+GGG | 0.765843 | 7_2:-16722312 | Msa1050790:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTTATTAGTCATT+CGG | - | chr7_2:16720973-16720992 | Msa1050790:intron | 10.0% |
| !!! | TTTCACTTAAACAATTTTTT+TGG | - | chr7_2:16719002-16719021 | Msa1050790:three_prime_UTR | 15.0% |
| !! | ATACAAATATGAAAATCAAA+AGG | + | chr7_2:16719028-16719047 | None:intergenic | 15.0% |
| !! | ATACTAGTATAAAACAAATA+AGG | + | chr7_2:16719181-16719200 | None:intergenic | 15.0% |
| !!! | TTTTAGAATTGTTGAATATA+GGG | + | chr7_2:16720370-16720389 | None:intergenic | 15.0% |
| !! | ACTACAATCTTATACAAATA+AGG | - | chr7_2:16718852-16718871 | Msa1050790:three_prime_UTR | 20.0% |
| !! | AATTATGATAATATTCTGCA+GGG | + | chr7_2:16718886-16718905 | None:intergenic | 20.0% |
| !! | AAATTATGATAATATTCTGC+AGG | + | chr7_2:16718887-16718906 | None:intergenic | 20.0% |
| !!! | TAATTTGATAACATCATCAA+AGG | - | chr7_2:16718901-16718920 | Msa1050790:three_prime_UTR | 20.0% |
| !!! | ACTTTTTTTCACGAATTTAT+GGG | + | chr7_2:16719211-16719230 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTCACGAATTTA+TGG | + | chr7_2:16719212-16719231 | None:intergenic | 20.0% |
| !!! | TCGTGAAAAAAAGTTTTATT+TGG | - | chr7_2:16719217-16719236 | Msa1050790:CDS | 20.0% |
| !! | TTAGACATACATTAATGTTA+TGG | - | chr7_2:16719265-16719284 | Msa1050790:CDS | 20.0% |
| !! | AGTCAAATCTCTAAATTATA+AGG | - | chr7_2:16719586-16719605 | Msa1050790:intron | 20.0% |
| !! | GATACAATTAAACAACTTAA+AGG | + | chr7_2:16720134-16720153 | None:intergenic | 20.0% |
| !!! | CTTTTAGAATTGTTGAATAT+AGG | + | chr7_2:16720371-16720390 | None:intergenic | 20.0% |
| !! | AGTAATTGTTGAATTATAGA+AGG | + | chr7_2:16720491-16720510 | None:intergenic | 20.0% |
| !!! | TTTAAAACAATGCTTAGAAA+TGG | + | chr7_2:16720600-16720619 | None:intergenic | 20.0% |
| !!! | CTAAGCATTGTTTTAAAATT+AGG | - | chr7_2:16720603-16720622 | Msa1050790:intron | 20.0% |
| !!! | CTAACAAATGTTTTAAAAGT+CGG | - | chr7_2:16720778-16720797 | Msa1050790:CDS | 20.0% |
| !! | AAAAATGCCAAAATAAAAAC+CGG | + | chr7_2:16720934-16720953 | None:intergenic | 20.0% |
| !! | TAAACAAATTGAAACATTTC+TGG | - | chr7_2:16721008-16721027 | Msa1050790:intron | 20.0% |
| !!! | AATAATTAGATTTTCGCTTT+TGG | + | chr7_2:16721102-16721121 | None:intergenic | 20.0% |
| !! | ATAGATTGAATTATTCTCTT+TGG | - | chr7_2:16721315-16721334 | Msa1050790:CDS | 20.0% |
| !! | ATATATCCAAAACTTACTTA+TGG | + | chr7_2:16721423-16721442 | None:intergenic | 20.0% |
| !! | TTATTTCAGCTTATTTCAAT+TGG | - | chr7_2:16721569-16721588 | Msa1050790:CDS | 20.0% |
| !! | TTTACATAAGTCAAAAATCT+TGG | + | chr7_2:16722336-16722355 | None:intergenic | 20.0% |
| !! | TTTGTATACAACTGATTTCT+CGG | - | chr7_2:16719041-16719060 | Msa1050790:three_prime_UTR | 25.0% |
| !!! | CTTTTTTTCACGAATTTATG+GGG | + | chr7_2:16719210-16719229 | None:intergenic | 25.0% |
| ! | GTACAATATCAGTTTGATAA+TGG | - | chr7_2:16719295-16719314 | Msa1050790:CDS | 25.0% |
| ! | ATATAACGTCGCAATATTTA+GGG | - | chr7_2:16719350-16719369 | Msa1050790:CDS | 25.0% |
| ! | ACTATTGATGAATAAATCTG+AGG | - | chr7_2:16719452-16719471 | Msa1050790:intron | 25.0% |
| ! | TGTACATACATAACAAATCA+TGG | - | chr7_2:16719486-16719505 | Msa1050790:intron | 25.0% |
| ! | TTATTCTACATTCACTATAG+AGG | - | chr7_2:16719563-16719582 | Msa1050790:intron | 25.0% |
| ! | TATGTATTGCATATTAAACC+AGG | - | chr7_2:16719632-16719651 | Msa1050790:intron | 25.0% |
| !! | TTTGAGAATTGTTGATTGTA+AGG | + | chr7_2:16719864-16719883 | None:intergenic | 25.0% |
| !!! | ACACGTTTGTATTTTTGTAA+CGG | + | chr7_2:16720215-16720234 | None:intergenic | 25.0% |
| !!! | AGATCCTTGAAGTTTTATAA+CGG | + | chr7_2:16720238-16720257 | None:intergenic | 25.0% |
| ! | TAGCTCTTAAAATTTAGAGA+CGG | + | chr7_2:16721074-16721093 | None:intergenic | 25.0% |
| !! | TATTTTCTCAAATGTTGCTA+TGG | - | chr7_2:16721118-16721137 | Msa1050790:intron | 25.0% |
| !! | AAACTTACTTATGGATTGAT+AGG | + | chr7_2:16721414-16721433 | None:intergenic | 25.0% |
| !! | ATCAATCCATAAGTAAGTTT+TGG | - | chr7_2:16721414-16721433 | Msa1050790:CDS | 25.0% |
| ! | ATATCAAGAACAGTTATAGT+TGG | - | chr7_2:16721439-16721458 | Msa1050790:CDS | 25.0% |
| ! | GTTATGAACAAACATTTGTT+TGG | - | chr7_2:16721603-16721622 | Msa1050790:intron | 25.0% |
| ! | ATTTGTTTGGAAACAACTTA+CGG | - | chr7_2:16721616-16721635 | Msa1050790:intron | 25.0% |
| CTTAAGAAGAATTCTCTTTG+AGG | + | chr7_2:16718789-16718808 | None:intergenic | 30.0% | |
| AGTCTCTTATTCAAATTCCA+TGG | - | chr7_2:16718807-16718826 | Msa1050790:three_prime_UTR | 30.0% | |
| GATATAACGTCGCAATATTT+AGG | - | chr7_2:16719349-16719368 | Msa1050790:CDS | 30.0% | |
| GGGTATCTAAATTATAGATC+TGG | - | chr7_2:16719380-16719399 | Msa1050790:CDS | 30.0% | |
| GAAAGAAGTTATATGGTCAA+TGG | - | chr7_2:16719734-16719753 | Msa1050790:intron | 30.0% | |
| CAATTCTCAAACTGTTGTAA+AGG | - | chr7_2:16719873-16719892 | Msa1050790:CDS | 30.0% | |
| AAAACTTCAAGGATCTATGT+AGG | - | chr7_2:16720242-16720261 | Msa1050790:intron | 30.0% | |
| TGTAACGAAATGTGTGAAAA+AGG | - | chr7_2:16720286-16720305 | Msa1050790:intron | 30.0% | |
| ATTGTTGAATATAGGGAACT+TGG | + | chr7_2:16720363-16720382 | None:intergenic | 30.0% | |
| GGAGAGATCATTAATTGTTT+AGG | + | chr7_2:16720579-16720598 | None:intergenic | 30.0% | |
| AAAATTAGGACTAAACCAAC+TGG | - | chr7_2:16720617-16720636 | Msa1050790:intron | 30.0% | |
| ! | TCGAGAATCAACTAGATTTT+TGG | - | chr7_2:16720828-16720847 | Msa1050790:intron | 30.0% |
| ! | ACAAATTGAAACATTTCTGG+AGG | - | chr7_2:16721011-16721030 | Msa1050790:intron | 30.0% |
| !!! | AGAGACGGTGTTTTAAAAAT+CGG | + | chr7_2:16721059-16721078 | None:intergenic | 30.0% |
| TGAGTGACATTGTTAAGATT+TGG | + | chr7_2:16721359-16721378 | None:intergenic | 30.0% | |
| AAGCTGAAATAAGCTGAAAT+CGG | + | chr7_2:16721561-16721580 | None:intergenic | 30.0% | |
| ATTCTTCAATGATCTGTTGA+TGG | - | chr7_2:16721869-16721888 | Msa1050790:intron | 30.0% | |
| TTTCACATGACAATTCAATC+TGG | + | chr7_2:16722138-16722157 | None:intergenic | 30.0% | |
| TATTAGAGATAGAATAGCAG+AGG | + | chr7_2:16722381-16722400 | None:intergenic | 30.0% | |
| !!! | AGTGTGCTATTTTCTTATGC+AGG | - | chr7_2:16718968-16718987 | Msa1050790:three_prime_UTR | 35.0% |
| ! | TATACAACTGATTTCTCGGA+CGG | - | chr7_2:16719045-16719064 | Msa1050790:three_prime_UTR | 35.0% |
| TATAGTTGCGTATGATCCTT+TGG | - | chr7_2:16719076-16719095 | Msa1050790:three_prime_UTR | 35.0% | |
| TATGATCCTTTGGATCCTAA+CGG | - | chr7_2:16719086-16719105 | Msa1050790:three_prime_UTR | 35.0% | |
| TTGATCGTTATGTTTCCGTT+AGG | + | chr7_2:16719104-16719123 | None:intergenic | 35.0% | |
| ACGGAAACATAACGATCAAA+TGG | - | chr7_2:16719105-16719124 | Msa1050790:three_prime_UTR | 35.0% | |
| CGGAAACATAACGATCAAAT+GGG | - | chr7_2:16719106-16719125 | Msa1050790:three_prime_UTR | 35.0% | |
| CAAGTAATCTTGATCATCGA+TGG | + | chr7_2:16719541-16719560 | None:intergenic | 35.0% | |
| TGAGCAATTTCCAAATGTAC+CGG | - | chr7_2:16719667-16719686 | Msa1050790:intron | 35.0% | |
| GGGCTAAGAAAGAAGTTATA+TGG | - | chr7_2:16719727-16719746 | Msa1050790:intron | 35.0% | |
| GAAGTTATATGGTCAATGGT+AGG | - | chr7_2:16719738-16719757 | Msa1050790:intron | 35.0% | |
| ! | GGAGATTGCTCTAAATTCAA+AGG | - | chr7_2:16719780-16719799 | Msa1050790:intron | 35.0% |
| TTCTCAAACTGTTGTAAAGG+TGG | - | chr7_2:16719876-16719895 | Msa1050790:CDS | 35.0% | |
| CCAAGAGAGTGAAATTCTTA+GGG | + | chr7_2:16719998-16720017 | None:intergenic | 35.0% | |
| GAATGTGTGAAAAAGGGTAA+TGG | + | chr7_2:16720193-16720212 | None:intergenic | 35.0% | |
| ! | GTAACGGAATGTGTGAAAAA+GGG | + | chr7_2:16720199-16720218 | None:intergenic | 35.0% |
| ! | TGTAACGGAATGTGTGAAAA+AGG | + | chr7_2:16720200-16720219 | None:intergenic | 35.0% |
| GTGTCCGTTATAAAACTTCA+AGG | - | chr7_2:16720231-16720250 | Msa1050790:intron | 35.0% | |
| GTACACTTAGTGGAACTTAA+CGG | - | chr7_2:16720316-16720335 | Msa1050790:intron | 35.0% | |
| TTCTATTTGATGCAGTGACA+TGG | - | chr7_2:16720398-16720417 | Msa1050790:intron | 35.0% | |
| AAGAAATTGTGAGTATGTGC+AGG | + | chr7_2:16720431-16720450 | None:intergenic | 35.0% | |
| GACAAAGATACACAACAACT+TGG | + | chr7_2:16720466-16720485 | None:intergenic | 35.0% | |
| TGACACAATTCTTCTTGTTC+TGG | + | chr7_2:16720540-16720559 | None:intergenic | 35.0% | |
| !!! | GTTTTTTGGTTGCTTTGATC+CGG | - | chr7_2:16720668-16720687 | Msa1050790:intron | 35.0% |
| ! | TAGTTGATTCTCGATTCAAC+CGG | + | chr7_2:16720822-16720841 | None:intergenic | 35.0% |
| TTCAACCTGATTGGTAGAAT+CGG | + | chr7_2:16720865-16720884 | None:intergenic | 35.0% | |
| AACCAACTATTGTTCAAGTG+GGG | + | chr7_2:16720908-16720927 | None:intergenic | 35.0% | |
| GAACCAACTATTGTTCAAGT+GGG | + | chr7_2:16720909-16720928 | None:intergenic | 35.0% | |
| TGAACCAACTATTGTTCAAG+TGG | + | chr7_2:16720910-16720929 | None:intergenic | 35.0% | |
| ! | TGAACAATAGTTGGTTCAAC+CGG | - | chr7_2:16720912-16720931 | Msa1050790:intron | 35.0% |
| !! | GGTTCAACCGGTTTTTATTT+TGG | - | chr7_2:16720924-16720943 | Msa1050790:intron | 35.0% |
| AATGGTTCATTGTCTCTCTT+TGG | + | chr7_2:16721191-16721210 | None:intergenic | 35.0% | |
| AGACCAACTATAAGGACTAT+TGG | - | chr7_2:16721261-16721280 | Msa1050790:CDS | 35.0% | |
| TCTCCAATAGTCCTTATAGT+TGG | + | chr7_2:16721267-16721286 | None:intergenic | 35.0% | |
| ATGTTGTATACAGATGACAC+TGG | - | chr7_2:16721828-16721847 | Msa1050790:intron | 35.0% | |
| TCTGATTGAACATTTCCACT+TGG | + | chr7_2:16721903-16721922 | None:intergenic | 35.0% | |
| AGTGCTTCTTCAAAAGAACA+AGG | - | chr7_2:16721923-16721942 | Msa1050790:intron | 35.0% | |
| CATTCACAGGTGAAGAATTA+GGG | + | chr7_2:16722046-16722065 | None:intergenic | 35.0% | |
| ACATTCACAGGTGAAGAATT+AGG | + | chr7_2:16722047-16722066 | None:intergenic | 35.0% | |
| AAATGAATGCTTGGAAGTTG+AGG | + | chr7_2:16722070-16722089 | None:intergenic | 35.0% | |
| CCAATGAGAAAATGAATGCT+TGG | + | chr7_2:16722079-16722098 | None:intergenic | 35.0% | |
| ! | CCAAGCATTCATTTTCTCAT+TGG | - | chr7_2:16722076-16722095 | Msa1050790:intron | 35.0% |
| !!! | CATGTGAAAATTTTGAAGCC+AGG | - | chr7_2:16722149-16722168 | Msa1050790:CDS | 35.0% |
| GTCTTTCATACCTGTTATTG+CGG | + | chr7_2:16722193-16722212 | None:intergenic | 35.0% | |
| !! | TCTCTTTGAGGTTCAAGTGA+TGG | + | chr7_2:16718777-16718796 | None:intergenic | 40.0% |
| TCAGCTCAATGCTATAACCA+TGG | + | chr7_2:16718827-16718846 | None:intergenic | 40.0% | |
| ! | ATGGTTATAGCATTGAGCTG+AGG | - | chr7_2:16718826-16718845 | Msa1050790:three_prime_UTR | 40.0% |
| ! | AAAGGCACATACTCAAGCAA+TGG | - | chr7_2:16718919-16718938 | Msa1050790:three_prime_UTR | 40.0% |
| AAGGCACATACTCAAGCAAT+GGG | - | chr7_2:16718920-16718939 | Msa1050790:three_prime_UTR | 40.0% | |
| ATGTTTCCGTTAGGATCCAA+AGG | + | chr7_2:16719095-16719114 | None:intergenic | 40.0% | |
| TCAAATGGGATGTTGTGTCT+TGG | - | chr7_2:16719120-16719139 | Msa1050790:exon | 40.0% | |
| ! | AACGTCGCAATATTTAGGGT+TGG | - | chr7_2:16719354-16719373 | Msa1050790:CDS | 40.0% |
| ! | ACGTCGCAATATTTAGGGTT+GGG | - | chr7_2:16719355-16719374 | Msa1050790:CDS | 40.0% |
| TTGCATATTAAACCAGGCAG+CGG | - | chr7_2:16719638-16719657 | Msa1050790:intron | 40.0% | |
| ! | TCATTATGTGCCGGTACATT+TGG | + | chr7_2:16719680-16719699 | None:intergenic | 40.0% |
| ATGGACATTAGGATGGTCAT+GGG | - | chr7_2:16719707-16719726 | Msa1050790:intron | 40.0% | |
| ! | GGAGTTTTCTTGCAACAATG+AGG | + | chr7_2:16719813-16719832 | None:intergenic | 40.0% |
| GTTGATTGTAAGGTACACCA+GGG | + | chr7_2:16719854-16719873 | None:intergenic | 40.0% | |
| ! | TGTTGATTGTAAGGTACACC+AGG | + | chr7_2:16719855-16719874 | None:intergenic | 40.0% |
| AAGCTGAAACTGCTGATGAA+GGG | + | chr7_2:16719926-16719945 | None:intergenic | 40.0% | |
| AAAGCTGAAACTGCTGATGA+AGG | + | chr7_2:16719927-16719946 | None:intergenic | 40.0% | |
| TCAGCTTTCCAAGTTAGTGT+CGG | - | chr7_2:16719939-16719958 | Msa1050790:CDS | 40.0% | |
| CCCTAAGAATTTCACTCTCT+TGG | - | chr7_2:16719995-16720014 | Msa1050790:CDS | 40.0% | |
| GCCAAGAGAGTGAAATTCTT+AGG | + | chr7_2:16719999-16720018 | None:intergenic | 40.0% | |
| TACTAAGTGCTTGAGTCTTG+CGG | + | chr7_2:16720094-16720113 | None:intergenic | 40.0% | |
| AGGTAACAGTGTACACTTAG+TGG | - | chr7_2:16720306-16720325 | Msa1050790:intron | 40.0% | |
| TGGAGAGGAATTCGATAAGT+AGG | + | chr7_2:16720343-16720362 | None:intergenic | 40.0% | |
| TGAATATAGGGAACTTGGAG+AGG | + | chr7_2:16720358-16720377 | None:intergenic | 40.0% | |
| ! | ACTAAACCAACTGGTTCAAC+CGG | - | chr7_2:16720626-16720645 | Msa1050790:intron | 40.0% |
| CCAAAAAACTGACTGAATCC+CGG | + | chr7_2:16720657-16720676 | None:intergenic | 40.0% | |
| ATCCGGATTGTACCACAATT+CGG | - | chr7_2:16720685-16720704 | Msa1050790:intron | 40.0% | |
| AACCGAATTGTGGTACAATC+CGG | + | chr7_2:16720690-16720709 | None:intergenic | 40.0% | |
| CCAAGGTTGAATCAAGTCAA+CGG | - | chr7_2:16720713-16720732 | Msa1050790:CDS | 40.0% | |
| CAAGGTTGAATCAAGTCAAC+GGG | - | chr7_2:16720714-16720733 | Msa1050790:CDS | 40.0% | |
| TAATCCCGATTCTACCAATC+AGG | - | chr7_2:16720857-16720876 | Msa1050790:intron | 40.0% | |
| TCAACCTGATTGGTAGAATC+GGG | + | chr7_2:16720864-16720883 | None:intergenic | 40.0% | |
| !! | TTCTACCAATCAGGTTGAAC+TGG | - | chr7_2:16720866-16720885 | Msa1050790:intron | 40.0% |
| AAACACCAGTTCAACCTGAT+TGG | + | chr7_2:16720874-16720893 | None:intergenic | 40.0% | |
| AACCCCACTTGAACAATAGT+TGG | - | chr7_2:16720903-16720922 | Msa1050790:intron | 40.0% | |
| AAATGTTGCTATGGTGTGCA+GGG | - | chr7_2:16721127-16721146 | Msa1050790:intron | 40.0% | |
| TCACTCCAAATTCCTAGACA+TGG | - | chr7_2:16721151-16721170 | Msa1050790:CDS | 40.0% | |
| TCCAAATTCCTAGACATGGT+AGG | - | chr7_2:16721155-16721174 | Msa1050790:CDS | 40.0% | |
| CCAAATTCCTAGACATGGTA+GGG | - | chr7_2:16721156-16721175 | Msa1050790:CDS | 40.0% | |
| TATGTAACCCTACCATGTCT+AGG | + | chr7_2:16721166-16721185 | None:intergenic | 40.0% | |
| GCATGTGAAGACCAACTATA+AGG | - | chr7_2:16721253-16721272 | Msa1050790:CDS | 40.0% | |
| ! | ATGGATTGATAGGCAAGCAA+AGG | + | chr7_2:16721404-16721423 | None:intergenic | 40.0% |
| AAACACTTACGAGACTGTTC+AGG | + | chr7_2:16721671-16721690 | None:intergenic | 40.0% | |
| GATGACACTGGTATGTTCTA+TGG | - | chr7_2:16721840-16721859 | Msa1050790:intron | 40.0% | |
| ! | AATGATCTGTTGATGGAAGC+TGG | - | chr7_2:16721876-16721895 | Msa1050790:intron | 40.0% |
| GAAACATTCACACTCAACCA+AGG | - | chr7_2:16721945-16721964 | Msa1050790:intron | 40.0% | |
| ATTCACACTCAACCAAGGAT+GGG | - | chr7_2:16721950-16721969 | Msa1050790:intron | 40.0% | |
| CCATTGAAGTAGACTCTTCT+AGG | + | chr7_2:16721981-16722000 | None:intergenic | 40.0% | |
| CCTAGAAGAGTCTACTTCAA+TGG | - | chr7_2:16721978-16721997 | Msa1050790:intron | 40.0% | |
| GTGAAGAATTAGGGAGGTAA+GGG | + | chr7_2:16722037-16722056 | None:intergenic | 40.0% | |
| ! | AAGCCAGGTATTGTTATCCT+CGG | - | chr7_2:16722164-16722183 | Msa1050790:intron | 40.0% |
| ATTCCGAGGATAACAATACC+TGG | + | chr7_2:16722170-16722189 | None:intergenic | 40.0% | |
| AACAGGTATGAAAGACTCTG+AGG | - | chr7_2:16722197-16722216 | Msa1050790:intron | 40.0% | |
| AGGCACATACTCAAGCAATG+GGG | - | chr7_2:16718921-16718940 | Msa1050790:three_prime_UTR | 45.0% | |
| ! | GCAATATTTAGGGTTGGGCA+GGG | - | chr7_2:16719360-16719379 | Msa1050790:CDS | 45.0% |
| ! | GTACCGGCACATAATGAATC+CGG | - | chr7_2:16719683-16719702 | Msa1050790:intron | 45.0% |
| TACCGGCACATAATGAATCC+GGG | - | chr7_2:16719684-16719703 | Msa1050790:intron | 45.0% | |
| ATCCCGGATTCATTATGTGC+CGG | + | chr7_2:16719689-16719708 | None:intergenic | 45.0% | |
| ATGAATCCGGGATGGACATT+AGG | - | chr7_2:16719696-16719715 | Msa1050790:intron | 45.0% | |
| GATGGACATTAGGATGGTCA+TGG | - | chr7_2:16719706-16719725 | Msa1050790:intron | 45.0% | |
| GGATCTCAAACAACTGAGCA+AGG | - | chr7_2:16719759-16719778 | Msa1050790:intron | 45.0% | |
| AATTTCACTCTCTTGGCTCC+TGG | - | chr7_2:16720002-16720021 | Msa1050790:CDS | 45.0% | |
| GTGGAAGGAACAATCTTAGC+AGG | + | chr7_2:16720047-16720066 | None:intergenic | 45.0% | |
| !!! | CCGGGATTCAGTCAGTTTTT+TGG | - | chr7_2:16720654-16720673 | Msa1050790:intron | 45.0% |
| ACCACAATTCGGTTGAACCA+AGG | - | chr7_2:16720696-16720715 | Msa1050790:CDS | 45.0% | |
| ACCTTGGTTCAACCGAATTG+TGG | + | chr7_2:16720700-16720719 | None:intergenic | 45.0% | |
| !! | CCGTTGACTTGATTCAACCT+TGG | + | chr7_2:16720716-16720735 | None:intergenic | 45.0% |
| GACCAAAACAGCTGTTCAAC+CGG | - | chr7_2:16720800-16720819 | Msa1050790:CDS | 45.0% | |
| ! | AACCGGTTGAACAGCTGTTT+TGG | + | chr7_2:16720805-16720824 | None:intergenic | 45.0% |
| CAAATGTTGCTATGGTGTGC+AGG | - | chr7_2:16721126-16721145 | Msa1050790:intron | 45.0% | |
| AATGTTGCTATGGTGTGCAG+GGG | - | chr7_2:16721128-16721147 | Msa1050790:intron | 45.0% | |
| CCCTACCATGTCTAGGAATT+TGG | + | chr7_2:16721159-16721178 | None:intergenic | 45.0% | |
| CCTAATGGGGCACATATGAT+GGG | + | chr7_2:16721225-16721244 | None:intergenic | 45.0% | |
| CCATCATATGTGCCCCATTA+GGG | - | chr7_2:16721223-16721242 | Msa1050790:CDS | 45.0% | |
| ACATGCCAGTGTACCCTAAT+GGG | + | chr7_2:16721239-16721258 | None:intergenic | 45.0% | |
| CATTCACACTCAACCAAGGA+TGG | - | chr7_2:16721949-16721968 | Msa1050790:intron | 45.0% | |
| ! | TTCTAGGAAATGCCCATCCT+TGG | + | chr7_2:16721965-16721984 | None:intergenic | 45.0% |
| TAAGGGTAGGTATCAGGTGA+AGG | + | chr7_2:16722020-16722039 | None:intergenic | 45.0% | |
| AGAATTAGGGAGGTAAGGGT+AGG | + | chr7_2:16722033-16722052 | None:intergenic | 45.0% | |
| GGTGAAGAATTAGGGAGGTA+AGG | + | chr7_2:16722038-16722057 | None:intergenic | 45.0% | |
| TCACAGGTGAAGAATTAGGG+AGG | + | chr7_2:16722043-16722062 | None:intergenic | 45.0% | |
| TGGAAGTTGAGGACATTCAC+AGG | + | chr7_2:16722059-16722078 | None:intergenic | 45.0% | |
| ! | TGGTTCTCTTGCTAGCTCTT+TGG | - | chr7_2:16722096-16722115 | Msa1050790:CDS | 45.0% |
| GTTGTGTCTTGGACAGCAGA+TGG | - | chr7_2:16719131-16719150 | Msa1050790:exon | 50.0% | |
| TTGGACAGCAGATGGCTATG+TGG | - | chr7_2:16719139-16719158 | Msa1050790:CDS | 50.0% | |
| ! | CGCAATATTTAGGGTTGGGC+AGG | - | chr7_2:16719359-16719378 | Msa1050790:CDS | 50.0% |
| GGCACATAATGAATCCGGGA+TGG | - | chr7_2:16719688-16719707 | Msa1050790:intron | 50.0% | |
| ATCCGGGATGGACATTAGGA+TGG | - | chr7_2:16719700-16719719 | Msa1050790:intron | 50.0% | |
| GACCATCCTAATGTCCATCC+CGG | + | chr7_2:16719705-16719724 | None:intergenic | 50.0% | |
| GGGAGAAGGTCTACAACTGT+TGG | + | chr7_2:16719834-16719853 | None:intergenic | 50.0% | |
| ACAGTTGTAGACCTTCTCCC+TGG | - | chr7_2:16719834-16719853 | Msa1050790:CDS | 50.0% | |
| TGTAAGGTACACCAGGGAGA+AGG | + | chr7_2:16719848-16719867 | None:intergenic | 50.0% | |
| AAGGTGGAGTTGTAGCAGCA+TGG | - | chr7_2:16719892-16719911 | Msa1050790:CDS | 50.0% | |
| AGGTGGAGTTGTAGCAGCAT+GGG | - | chr7_2:16719893-16719912 | Msa1050790:CDS | 50.0% | |
| CAGCTTGTCCGACACTAACT+TGG | + | chr7_2:16719950-16719969 | None:intergenic | 50.0% | |
| ! | CAAGTTAGTGTCGGACAAGC+TGG | - | chr7_2:16719948-16719967 | Msa1050790:CDS | 50.0% |
| TTCCACCACTTTCCTCACCA+CGG | - | chr7_2:16720061-16720080 | Msa1050790:CDS | 50.0% | |
| CTTATCCGTGGTGAGGAAAG+TGG | + | chr7_2:16720069-16720088 | None:intergenic | 50.0% | |
| CCACATGCACAAGAAGGACA+AGG | + | chr7_2:16720514-16720533 | None:intergenic | 50.0% | |
| CCTTGTCCTTCTTGTGCATG+TGG | - | chr7_2:16720511-16720530 | Msa1050790:intron | 50.0% | |
| GTTCAACCGGTTGAACCAGT+TGG | + | chr7_2:16720635-16720654 | None:intergenic | 50.0% | |
| ! | ACTGGTTCAACCGGTTGAAC+CGG | - | chr7_2:16720635-16720654 | Msa1050790:intron | 50.0% |
| TGACTGAATCCCGGTTCAAC+CGG | + | chr7_2:16720648-16720667 | None:intergenic | 50.0% | |
| ! | TGATGGGTACACTGCAGCAA+TGG | + | chr7_2:16721209-16721228 | None:intergenic | 50.0% |
| CCCATCATATGTGCCCCATT+AGG | - | chr7_2:16721222-16721241 | Msa1050790:CDS | 50.0% | |
| CCCTAATGGGGCACATATGA+TGG | + | chr7_2:16721226-16721245 | None:intergenic | 50.0% | |
| CATGCCAGTGTACCCTAATG+GGG | + | chr7_2:16721238-16721257 | None:intergenic | 50.0% | |
| CACATGCCAGTGTACCCTAA+TGG | + | chr7_2:16721240-16721259 | None:intergenic | 50.0% | |
| TTGATGGAAGCTGGACCAAG+TGG | - | chr7_2:16721885-16721904 | Msa1050790:intron | 50.0% | |
| TCCTCGGAATCCGCAATAAC+AGG | - | chr7_2:16722180-16722199 | Msa1050790:intron | 50.0% | |
| ACCTGTTATTGCGGATTCCG+AGG | + | chr7_2:16722184-16722203 | None:intergenic | 50.0% | |
| GGTGGAGTTGTAGCAGCATG+GGG | - | chr7_2:16719894-16719913 | Msa1050790:CDS | 55.0% | |
| CCACAAGTATAGCCAGGTCC+AGG | + | chr7_2:16720023-16720042 | None:intergenic | 55.0% | |
| CCTGGACCTGGCTATACTTG+TGG | - | chr7_2:16720020-16720039 | Msa1050790:CDS | 55.0% | |
| GCAGGACCACAAGTATAGCC+AGG | + | chr7_2:16720029-16720048 | None:intergenic | 55.0% | |
| ! | GTGGTGAGGAAAGTGGTGGA+AGG | + | chr7_2:16720062-16720081 | None:intergenic | 55.0% |
| ATCCGTGGTGAGGAAAGTGG+TGG | + | chr7_2:16720066-16720085 | None:intergenic | 55.0% | |
| TGGCAGCCACATGCACAAGA+AGG | + | chr7_2:16720520-16720539 | None:intergenic | 55.0% | |
| CTGGTTCAACCGGTTGAACC+GGG | - | chr7_2:16720636-16720655 | Msa1050790:intron | 55.0% | |
| TGTGCCCCATTAGGGTACAC+TGG | - | chr7_2:16721231-16721250 | Msa1050790:CDS | 55.0% | |
| GGGAGGTAAGGGTAGGTATC+AGG | + | chr7_2:16722026-16722045 | None:intergenic | 55.0% | |
| TGCTCATCGTTACCGCTGCC+TGG | + | chr7_2:16719653-16719672 | None:intergenic | 60.0% | |
| ACTCTCTTGGCTCCTGGACC+TGG | - | chr7_2:16720008-16720027 | Msa1050790:CDS | 60.0% | |
| AGTCTTGCGGCGCTTATCCG+TGG | + | chr7_2:16720081-16720100 | None:intergenic | 60.0% | |
| TGCGGCGCTTATCCGTGGTG+AGG | + | chr7_2:16720076-16720095 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 16718768 | 16722487 | 16718768 | ID=Msa1050790;Name=Msa1050790 |
| chr7_2 | mRNA | 16718768 | 16722487 | 16718768 | ID=Msa1050790-mRNA-1;Parent=Msa1050790;Name=Msa1050790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=170|1|1|1|1|1|6|366|431 |
| chr7_2 | exon | 16718768 | 16719414 | 16718768 | ID=Msa1050790-mRNA-1:exon:3768;Parent=Msa1050790-mRNA-1 |
| chr7_2 | exon | 16719830 | 16720107 | 16719830 | ID=Msa1050790-mRNA-1:exon:3767;Parent=Msa1050790-mRNA-1 |
| chr7_2 | exon | 16720695 | 16720842 | 16720695 | ID=Msa1050790-mRNA-1:exon:3766;Parent=Msa1050790-mRNA-1 |
| chr7_2 | exon | 16721145 | 16721601 | 16721145 | ID=Msa1050790-mRNA-1:exon:3765;Parent=Msa1050790-mRNA-1 |
| chr7_2 | exon | 16722095 | 16722174 | 16722095 | ID=Msa1050790-mRNA-1:exon:3764;Parent=Msa1050790-mRNA-1 |
| chr7_2 | exon | 16722266 | 16722487 | 16722266 | ID=Msa1050790-mRNA-1:exon:3763;Parent=Msa1050790-mRNA-1 |
| chr7_2 | five_prime_UTR | 16722318 | 16722487 | 16722318 | ID=Msa1050790-mRNA-1:five_prime_utr;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16722266 | 16722317 | 16722266 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16722095 | 16722174 | 16722095 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16721145 | 16721601 | 16721145 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16720695 | 16720842 | 16720695 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16719830 | 16720107 | 16719830 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | CDS | 16719134 | 16719414 | 16719134 | ID=Msa1050790-mRNA-1:cds;Parent=Msa1050790-mRNA-1 |
| chr7_2 | three_prime_UTR | 16718768 | 16719133 | 16718768 | ID=Msa1050790-mRNA-1:three_prime_utr;Parent=Msa1050790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
