Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098190 | XP_013447669.1 | 98.376 | 431 | 7 | 0 | 1 | 431 | 1 | 431 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098190 | sp|Q9LFW3|COBL4_ARATH | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098190 | A0A072TW67 | 98.376 | 431 | 7 | 0 | 1 | 431 | 1 | 431 | 0.0 | 884 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043190 | Msa1098190 | 0.828026 | 1.129876e-54 | -8.615850e-47 |
| Msa0089830 | Msa1098190 | 0.806374 | 8.485988e-50 | -8.615850e-47 |
| Msa0137020 | Msa1098190 | 0.816685 | 4.869608e-52 | -8.615850e-47 |
| Msa1050790 | Msa1098190 | 0.943372 | 1.354558e-102 | -8.615850e-47 |
| Msa1098190 | Msa1138230 | 0.902221 | 1.210072e-78 | -8.615850e-47 |
| Msa1098190 | Msa1361830 | 0.809080 | 2.257460e-50 | -8.615850e-47 |
| Msa0548590 | Msa1098190 | 0.802712 | 4.924834e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098190 | MtrunA17_Chr7g0219931 | 98.376 | 431 | 7 | 0 | 1 | 431 | 1 | 431 | 0.0 | 884 |
| Msa1098190 | MtrunA17_Chr6g0455411 | 84.455 | 431 | 67 | 0 | 1 | 431 | 1 | 431 | 0.0 | 782 |
| Msa1098190 | MtrunA17_Chr2g0308371 | 69.363 | 408 | 120 | 2 | 7 | 410 | 13 | 419 | 0.0 | 634 |
| Msa1098190 | MtrunA17_Chr7g0219921 | 67.285 | 431 | 133 | 2 | 9 | 431 | 13 | 443 | 0.0 | 627 |
| Msa1098190 | MtrunA17_Chr2g0308381 | 66.590 | 434 | 137 | 2 | 3 | 428 | 18 | 451 | 0.0 | 621 |
| Msa1098190 | MtrunA17_Chr6g0455401 | 65.197 | 431 | 145 | 2 | 4 | 430 | 13 | 442 | 0.0 | 613 |
| Msa1098190 | MtrunA17_Chr6g0455391 | 65.239 | 397 | 127 | 3 | 17 | 409 | 25 | 414 | 0.0 | 559 |
| Msa1098190 | MtrunA17_Chr2g0333731 | 57.794 | 417 | 171 | 2 | 19 | 430 | 28 | 444 | 0.0 | 533 |
| Msa1098190 | MtrunA17_Chr3g0145441 | 42.396 | 434 | 223 | 10 | 10 | 427 | 33 | 455 | 3.39e-125 | 370 |
| Msa1098190 | MtrunA17_Chr2g0294901 | 28.369 | 423 | 248 | 17 | 26 | 399 | 208 | 624 | 2.30e-36 | 141 |
| Msa1098190 | MtrunA17_Chr2g0319581 | 26.269 | 453 | 265 | 18 | 27 | 426 | 226 | 662 | 9.61e-32 | 127 |
| Msa1098190 | MtrunA17_Chr5g0394101 | 26.991 | 452 | 265 | 21 | 27 | 430 | 26 | 460 | 2.25e-31 | 125 |
| Msa1098190 | MtrunA17_Chr4g0068011 | 26.573 | 429 | 247 | 20 | 26 | 399 | 204 | 619 | 3.18e-31 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098190 | AT5G15630.1 | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Msa1098190 | AT5G15630.3 | 82.828 | 396 | 67 | 1 | 36 | 431 | 1 | 395 | 0.0 | 707 |
| Msa1098190 | AT5G15630.4 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1098190 | AT5G15630.2 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1098190 | AT5G60920.1 | 67.233 | 412 | 129 | 2 | 14 | 419 | 31 | 442 | 0.0 | 612 |
| Msa1098190 | AT3G29810.1 | 63.781 | 439 | 148 | 3 | 1 | 430 | 1 | 437 | 0.0 | 610 |
| Msa1098190 | AT3G02210.1 | 64.977 | 434 | 139 | 5 | 7 | 428 | 16 | 448 | 0.0 | 608 |
| Msa1098190 | AT5G15630.5 | 86.378 | 323 | 44 | 0 | 17 | 339 | 18 | 340 | 0.0 | 604 |
| Msa1098190 | AT5G60920.2 | 67.342 | 395 | 123 | 2 | 31 | 419 | 1 | 395 | 0.0 | 586 |
| Msa1098190 | AT1G09790.2 | 50.856 | 409 | 193 | 5 | 3 | 407 | 8 | 412 | 5.45e-148 | 428 |
| Msa1098190 | AT1G09790.1 | 52.152 | 395 | 181 | 5 | 17 | 407 | 33 | 423 | 8.94e-147 | 426 |
| Msa1098190 | AT5G60950.1 | 53.333 | 210 | 87 | 5 | 1 | 207 | 1 | 202 | 5.02e-69 | 218 |
| Msa1098190 | AT4G16120.1 | 26.651 | 424 | 253 | 17 | 26 | 399 | 216 | 631 | 7.89e-36 | 140 |
| Msa1098190 | AT5G49270.1 | 25.577 | 477 | 293 | 20 | 5 | 428 | 195 | 662 | 2.31e-35 | 139 |
| Msa1098190 | AT4G27110.1 | 25.778 | 450 | 274 | 18 | 26 | 428 | 218 | 654 | 4.15e-30 | 123 |
| Msa1098190 | AT3G20580.1 | 25.821 | 457 | 270 | 18 | 27 | 430 | 229 | 669 | 3.47e-29 | 120 |
| Msa1098190 | AT3G16860.1 | 25.439 | 456 | 273 | 21 | 26 | 430 | 209 | 648 | 4.61e-29 | 120 |
Find 130 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGAAGTAGACTCTTCT+AGG | 0.204492 | 7_3:+24907683 | None:intergenic |
| CCCTACCATGTCTAGGAATT+TGG | 0.235761 | 7_3:+24908505 | None:intergenic |
| ACATTCACAGGTGAAGAATT+AGG | 0.246801 | 7_3:+24907617 | None:intergenic |
| ATAGATTGAATTATTCTCTT+TGG | 0.265682 | 7_3:-24908346 | Msa1098190:CDS |
| GCCAAGAGAGTGAAGTTCTT+AGG | 0.266873 | 7_3:+24910031 | None:intergenic |
| ACTACAATCTTATACAAATA+AGG | 0.271232 | 7_3:-24911153 | Msa1098190:five_prime_UTR |
| GATGACACTGGTATGTTCTA+TGG | 0.291498 | 7_3:-24907821 | Msa1098190:CDS |
| TCATTATGTGCCGGTACATT+TGG | 0.302315 | 7_3:+24910350 | None:intergenic |
| TGGTTCTCTTGCTAGCTCTT+TGG | 0.310873 | 7_3:-24907565 | Msa1098190:CDS |
| AATGGTTCATTGTCTCTCTT+TGG | 0.317826 | 7_3:+24908473 | None:intergenic |
| AAACTTACTTATGGATTGAT+AGG | 0.323084 | 7_3:+24908250 | None:intergenic |
| GGGAGGTAAGGGTAGGTATC+AGG | 0.323587 | 7_3:+24907638 | None:intergenic |
| CACATGCCAGTGTACCCTAA+TGG | 0.336728 | 7_3:+24908424 | None:intergenic |
| ATTCTTCAATGATCTGTTGA+TGG | 0.346271 | 7_3:-24907792 | Msa1098190:CDS |
| ACATGCCAGTGTACCCTAAT+GGG | 0.355418 | 7_3:+24908425 | None:intergenic |
| TGACACAATTCTTCTTGTTC+TGG | 0.356305 | 7_3:+24909127 | None:intergenic |
| TGAGTGACATTGTTAAGATT+TGG | 0.358767 | 7_3:+24908305 | None:intergenic |
| TTTGAGAATTGTTGATTGTA+AGG | 0.364512 | 7_3:+24910166 | None:intergenic |
| CCATCATATGTGCCCCATTA+GGG | 0.375987 | 7_3:-24908438 | Msa1098190:CDS |
| TATAGCTGCGTATGATCCTT+TGG | 0.385309 | 7_3:-24910929 | Msa1098190:intron |
| ACGGAAACATAACGATCAAA+TGG | 0.386008 | 7_3:-24910900 | Msa1098190:CDS |
| ACTCTCTTGGCTCCTGGACC+TGG | 0.387638 | 7_3:-24910019 | Msa1098190:CDS |
| GCATGTGAAGACCAACTATA+AGG | 0.392920 | 7_3:-24908408 | Msa1098190:CDS |
| ATGAATCCGGGATGGACATT+AGG | 0.393954 | 7_3:-24910331 | Msa1098190:CDS |
| CCCATCATATGTGCCCCATT+AGG | 0.397500 | 7_3:-24908439 | Msa1098190:CDS |
| TCCTCGGAATCCGCAATAAC+AGG | 0.398952 | 7_3:-24907481 | Msa1098190:three_prime_UTR |
| CTTAAGAAGAATTCTCTTTG+AGG | 0.402882 | 7_3:+24911219 | None:intergenic |
| CATTCACAGGTGAAGAATTA+GGG | 0.411850 | 7_3:+24907618 | None:intergenic |
| CAGCTTGTCCAACACTAACT+TGG | 0.417677 | 7_3:+24910080 | None:intergenic |
| GGGCTAAGAAAGAAGTTATA+TGG | 0.429585 | 7_3:-24910300 | Msa1098190:CDS |
| TTTCACATGACAATTCAATC+TGG | 0.431383 | 7_3:+24907526 | None:intergenic |
| CCAAGAGAGTGAAGTTCTTA+GGG | 0.437840 | 7_3:+24910032 | None:intergenic |
| AGTAATTGTCGAATTATAGA+AGG | 0.437981 | 7_3:+24909176 | None:intergenic |
| AACTTCACTCTCTTGGCTCC+TGG | 0.438238 | 7_3:-24910025 | Msa1098190:CDS |
| CCTAGAAGAGTCTACTTCAA+TGG | 0.447276 | 7_3:-24907683 | Msa1098190:CDS |
| CAATTCTCAAATTGTTGTAA+AGG | 0.450658 | 7_3:-24910154 | Msa1098190:CDS |
| TTCTAGGAAATGCCCATCCT+TGG | 0.450855 | 7_3:+24907699 | None:intergenic |
| CTTCTTGTTCTGGCAGCCAC+AGG | 0.451368 | 7_3:+24909137 | None:intergenic |
| GTACCGGCACATAATGAATC+CGG | 0.453105 | 7_3:-24910344 | Msa1098190:CDS |
| CAAGTTAGTGTTGGACAAGC+TGG | 0.454753 | 7_3:-24910079 | Msa1098190:CDS |
| AAATTATGATAATATTCTGC+TGG | 0.456883 | 7_3:+24911121 | None:intergenic |
| TTGATCGTTATGTTTCCGTT+AGG | 0.458263 | 7_3:+24910904 | None:intergenic |
| CGGAAACATAACGATCAAAT+GGG | 0.463111 | 7_3:-24910899 | Msa1098190:CDS |
| CCCTAAGAACTTCACTCTCT+TGG | 0.464645 | 7_3:-24910032 | Msa1098190:CDS |
| AATGATCTGTTGATGGAAGC+TGG | 0.476907 | 7_3:-24907785 | Msa1098190:CDS |
| GTGAAGAATTAGGGAGGTAA+GGG | 0.479660 | 7_3:+24907627 | None:intergenic |
| AGACCAACTATAAGGACTAT+TGG | 0.483874 | 7_3:-24908400 | Msa1098190:CDS |
| GGTGAAGAATTAGGGAGGTA+AGG | 0.486426 | 7_3:+24907626 | None:intergenic |
| CCAATGAGAAAATGAATGCT+TGG | 0.488052 | 7_3:+24907585 | None:intergenic |
| CCCTAATGGGGCACATATGA+TGG | 0.488059 | 7_3:+24908438 | None:intergenic |
| AGTCTCTTGTTCAAATTCCA+TGG | 0.501856 | 7_3:-24911198 | Msa1098190:five_prime_UTR |
| ATTCCGAGGATAACAATACT+TGG | 0.502367 | 7_3:+24907494 | None:intergenic |
| TCTCTTTGAGGTTCAAGTGA+TGG | 0.503965 | 7_3:+24911231 | None:intergenic |
| CATTCACACTCAACCAAGGA+TGG | 0.509638 | 7_3:-24907712 | Msa1098190:CDS |
| TTCTATTTCATGCAGTGACA+TGG | 0.511867 | 7_3:-24909266 | Msa1098190:intron |
| AGGTGGAGTTGTAGCAGCAT+GGG | 0.513354 | 7_3:-24910134 | Msa1098190:CDS |
| AAGCCAAGTATTGTTATCCT+CGG | 0.514159 | 7_3:-24907497 | Msa1098190:three_prime_UTR |
| GAAAGAAGTTATATGGTCAA+TGG | 0.516208 | 7_3:-24910293 | Msa1098190:CDS |
| AAATGAATGCTTGGAAGTTG+AGG | 0.520645 | 7_3:+24907594 | None:intergenic |
| TTCTCAAATTGTTGTAAAGG+TGG | 0.524307 | 7_3:-24910151 | Msa1098190:CDS |
| GTCTTTCATACCTGTTATTG+CGG | 0.528544 | 7_3:+24907471 | None:intergenic |
| AATTATGATAATATTCTGCT+GGG | 0.532171 | 7_3:+24911122 | None:intergenic |
| CCTGGACCTGGCTATACTTG+TGG | 0.535517 | 7_3:-24910007 | Msa1098190:CDS |
| GTGGAAGGAACAATCTTAGC+AGG | 0.535993 | 7_3:+24909983 | None:intergenic |
| AAGGTGGAGTTGTAGCAGCA+TGG | 0.537097 | 7_3:-24910135 | Msa1098190:CDS |
| CAGGTATGAAAGACTCTTTG+AGG | 0.542444 | 7_3:-24907462 | Msa1098190:three_prime_UTR |
| ACCTGTTATTGCGGATTCCG+AGG | 0.545949 | 7_3:+24907480 | None:intergenic |
| TCTCCAATAGTCCTTATAGT+TGG | 0.547359 | 7_3:+24908397 | None:intergenic |
| CCAAATTCCTAGACATGGTA+GGG | 0.547458 | 7_3:-24908505 | Msa1098190:CDS |
| GGAGATTGCTCTAAATTCAA+AGG | 0.547885 | 7_3:-24910247 | Msa1098190:CDS |
| GGGAGAAGGTCTACAACTGT+TGG | 0.548912 | 7_3:+24910196 | None:intergenic |
| CCTTGTCCTTCTTGTGCCTG+TGG | 0.549282 | 7_3:-24909153 | Msa1098190:CDS |
| CCACAAGTATAGCCAGGTCC+AGG | 0.550373 | 7_3:+24910007 | None:intergenic |
| TCAGCTTTCCAAGTTAGTGT+TGG | 0.551420 | 7_3:-24910088 | Msa1098190:CDS |
| ATGTTTCCGTTAGGATCCAA+AGG | 0.555246 | 7_3:+24910913 | None:intergenic |
| ATCCCGGATTCATTATGTGC+CGG | 0.555425 | 7_3:+24910341 | None:intergenic |
| TGTTGATTGTAAGGTACACC+AGG | 0.555754 | 7_3:+24910175 | None:intergenic |
| AGTTGTAGCAGCATGGGGAC+AGG | 0.555822 | 7_3:-24910128 | Msa1098190:CDS |
| GACCATCCTAATGTCCATCC+CGG | 0.556854 | 7_3:+24910325 | None:intergenic |
| GACAAAGATACACAACAACT+TGG | 0.559821 | 7_3:+24909201 | None:intergenic |
| TCAGCTCAATGCTATAACCA+TGG | 0.562594 | 7_3:+24911181 | None:intergenic |
| TATTAGAGATAGAATAGCAG+AGG | 0.563686 | 7_3:+24907281 | None:intergenic |
| GATGGACATTAGGATGGTCA+TGG | 0.563833 | 7_3:-24910321 | Msa1098190:CDS |
| TACCGGCACATAATGAATCC+GGG | 0.564236 | 7_3:-24910343 | Msa1098190:CDS |
| TCAAATGGGATGTTGTGTCT+TGG | 0.564466 | 7_3:-24910885 | Msa1098190:CDS |
| TGGAAGTTGAGGACATTCAC+AGG | 0.567315 | 7_3:+24907605 | None:intergenic |
| TATGTAACCCTACCATGTCT+AGG | 0.570312 | 7_3:+24908498 | None:intergenic |
| GCAGGACCACAAGTATAGCC+AGG | 0.572292 | 7_3:+24910001 | None:intergenic |
| TCTGATTGAACATTTCCACT+TGG | 0.576717 | 7_3:+24907761 | None:intergenic |
| GAAGTTATATGGTCAATGGT+AGG | 0.576968 | 7_3:-24910289 | Msa1098190:CDS |
| AGAATTAGGGAGGTAAGGGT+AGG | 0.577816 | 7_3:+24907631 | None:intergenic |
| CCTAATGGGGCACATATGAT+GGG | 0.578981 | 7_3:+24908439 | None:intergenic |
| ACAGTTGTAGACCTTCTCCC+TGG | 0.591273 | 7_3:-24910193 | Msa1098190:CDS |
| TCATCAAAGGCACATACTCA+AGG | 0.592412 | 7_3:-24911091 | Msa1098190:five_prime_UTR |
| AAGCTGAAACAGCTGAGGAA+GGG | 0.594167 | 7_3:+24910104 | None:intergenic |
| AAAGCTGAAACAGCTGAGGA+AGG | 0.594435 | 7_3:+24910103 | None:intergenic |
| TCCAAATTCCTAGACATGGT+AGG | 0.594448 | 7_3:-24908506 | Msa1098190:CDS |
| TGAGCAATTTCCAAATGTAC+CGG | 0.595133 | 7_3:-24910360 | Msa1098190:CDS |
| TAATTTGATAACATCATCAA+AGG | 0.595516 | 7_3:-24911104 | Msa1098190:five_prime_UTR |
| ATGGATTGATAGGCAAGCAA+AGG | 0.600447 | 7_3:+24908260 | None:intergenic |
| CTTATCTGTGGTGAGGAAAG+TGG | 0.606748 | 7_3:+24909961 | None:intergenic |
| TGATGGGTGCACTGCAGCAA+TGG | 0.608565 | 7_3:+24908455 | None:intergenic |
| GGATCTCAAACAACTGAGCA+AGG | 0.609506 | 7_3:-24910268 | Msa1098190:CDS |
| TAAGGGTAGGTATCAGGTGA+AGG | 0.609655 | 7_3:+24907644 | None:intergenic |
| TGTAAGGTACACCAGGGAGA+AGG | 0.612287 | 7_3:+24910182 | None:intergenic |
| AGTCTTGCGTCGCTTATCTG+TGG | 0.613274 | 7_3:+24909949 | None:intergenic |
| TGGCAGCCACAGGCACAAGA+AGG | 0.613516 | 7_3:+24909147 | None:intergenic |
| AGGCACATACTCAAGGAATG+AGG | 0.617378 | 7_3:-24911084 | Msa1098190:exon |
| GGCACATAATGAATCCGGGA+TGG | 0.619121 | 7_3:-24910339 | Msa1098190:CDS |
| TATGATCCTTTGGATCCTAA+CGG | 0.620795 | 7_3:-24910919 | Msa1098190:CDS |
| ATCCGGGATGGACATTAGGA+TGG | 0.625045 | 7_3:-24910327 | Msa1098190:CDS |
| GTTGTGTCTTGGACAGCAGA+TGG | 0.625701 | 7_3:-24910874 | Msa1098190:CDS |
| CCACAGGCACAAGAAGGACA+AGG | 0.628997 | 7_3:+24909153 | None:intergenic |
| ATGGTTATAGCATTGAGCTG+AGG | 0.631417 | 7_3:-24911179 | Msa1098190:five_prime_UTR |
| ATTCACACTCAACCAAGGAT+GGG | 0.632798 | 7_3:-24907711 | Msa1098190:CDS |
| ATGGACATTAGGATGGTCAT+GGG | 0.635614 | 7_3:-24910320 | Msa1098190:CDS |
| TGCGTCGCTTATCTGTGGTG+AGG | 0.644268 | 7_3:+24909954 | None:intergenic |
| TCACTCCAAATTCCTAGACA+TGG | 0.655074 | 7_3:-24908510 | Msa1098190:CDS |
| GGTGGAGTTGTAGCAGCATG+GGG | 0.655728 | 7_3:-24910133 | Msa1098190:CDS |
| AGTGCTTCTTCAAAAGAACA+AGG | 0.656475 | 7_3:-24907738 | Msa1098190:CDS |
| TTGGAAAGCTGAAACAGCTG+AGG | 0.661273 | 7_3:+24910099 | None:intergenic |
| CATGCCAGTGTACCCTAATG+GGG | 0.668279 | 7_3:+24908426 | None:intergenic |
| GAAACATTCACACTCAACCA+AGG | 0.672658 | 7_3:-24907716 | Msa1098190:CDS |
| TTGATGGAAGCTGGACCAAG+TGG | 0.686970 | 7_3:-24907776 | Msa1098190:CDS |
| GTGGTGAGGAAAGTGGTGGA+AGG | 0.693197 | 7_3:+24909968 | None:intergenic |
| GTTGATTGTAAGGTACACCA+GGG | 0.694046 | 7_3:+24910176 | None:intergenic |
| ATCTGTGGTGAGGAAAGTGG+TGG | 0.697449 | 7_3:+24909964 | None:intergenic |
| TTGGACAGCAGATGGCTATG+TGG | 0.698211 | 7_3:-24910866 | Msa1098190:intron |
| ATGTTGTATACAGATGACAC+TGG | 0.702156 | 7_3:-24907833 | Msa1098190:intron |
| TCACAGGTGAAGAATTAGGG+AGG | 0.715117 | 7_3:+24907621 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATAAATAAATAAAT+AGG | + | chr7_3:24909743-24909762 | None:intergenic | 0.0% |
| !! | TTATTTATTTATTAGTCATT+CGG | - | chr7_3:24909753-24909772 | Msa1098190:intron | 10.0% |
| !!! | TTTCACTTAAACAATTTTTT+TGG | - | chr7_3:24907428-24907447 | Msa1098190:three_prime_UTR | 15.0% |
| !!! | GTGAAAAGAATTTTTTTTTT+TGG | - | chr7_3:24907645-24907664 | Msa1098190:CDS | 15.0% |
| !!! | TTTTAGAATTGTTGAATATA+TGG | + | chr7_3:24909138-24909157 | None:intergenic | 15.0% |
| !!! | CTAAGTAATGTTTTAAAATT+AGG | - | chr7_3:24909370-24909389 | Msa1098190:intron | 15.0% |
| !! | AAAAATGCAAAAATAAAAAC+CGG | + | chr7_3:24909698-24909717 | None:intergenic | 15.0% |
| !!! | AATAATTAGATTTTCTCTTT+TGG | + | chr7_3:24909879-24909898 | None:intergenic | 15.0% |
| !!! | ATATATCTAAAACTTACTTA+TGG | + | chr7_3:24910193-24910212 | None:intergenic | 15.0% |
| !! | ACTACAATCTTATACAAATA+AGG | - | chr7_3:24907278-24907297 | Msa1098190:three_prime_UTR | 20.0% |
| !! | AATTATGATAATATTCTGCT+GGG | + | chr7_3:24907312-24907331 | None:intergenic | 20.0% |
| !! | AAATTATGATAATATTCTGC+TGG | + | chr7_3:24907313-24907332 | None:intergenic | 20.0% |
| !!! | TAATTTGATAACATCATCAA+AGG | - | chr7_3:24907327-24907346 | Msa1098190:three_prime_UTR | 20.0% |
| !! | ATACGAATATGAAAATGAAA+AGG | + | chr7_3:24907454-24907473 | None:intergenic | 20.0% |
| !! | ATACAAGTATCAAACAAATA+AGG | + | chr7_3:24907607-24907626 | None:intergenic | 20.0% |
| !!! | AATTCTTTTCACGAATTTAT+GGG | + | chr7_3:24907637-24907656 | None:intergenic | 20.0% |
| !!! | AAATTCTTTTCACGAATTTA+TGG | + | chr7_3:24907638-24907657 | None:intergenic | 20.0% |
| !! | TTAGACATACATTAATGTTA+TGG | - | chr7_3:24907693-24907712 | Msa1098190:CDS | 20.0% |
| !!! | TTAGTCTTAATTTGTTCTTT+CGG | + | chr7_3:24907754-24907773 | None:intergenic | 20.0% |
| !! | TTATTCTACATTCACTATAT+AGG | - | chr7_3:24907991-24908010 | Msa1098190:intron | 20.0% |
| !! | ATAATAGAATGTGTGAAAAT+GGG | + | chr7_3:24908967-24908986 | None:intergenic | 20.0% |
| !! | TATAATAGAATGTGTGAAAA+TGG | + | chr7_3:24908968-24908987 | None:intergenic | 20.0% |
| !! | ATAGATTGAATTATTCTCTT+TGG | - | chr7_3:24910085-24910104 | Msa1098190:CDS | 20.0% |
| !! | TTATTTCAGCTTATTTCAAT+TGG | - | chr7_3:24910339-24910358 | Msa1098190:CDS | 20.0% |
| !! | TTTACATAAGTCAAAAATCT+TGG | + | chr7_3:24911108-24911127 | None:intergenic | 20.0% |
| !! | ATTCTTTTCACGAATTTATG+GGG | + | chr7_3:24907636-24907655 | None:intergenic | 25.0% |
| ! | ACTATTGATGAATAAATCAG+AGG | - | chr7_3:24907880-24907899 | Msa1098190:intron | 25.0% |
| ! | GTAATCTTTCATATTATACC+AGG | - | chr7_3:24908036-24908055 | Msa1098190:intron | 25.0% |
| !! | TTTGAGAATTGTTGATTGTA+AGG | + | chr7_3:24908268-24908287 | None:intergenic | 25.0% |
| ! | CAATTCTCAAATTGTTGTAA+AGG | - | chr7_3:24908277-24908296 | Msa1098190:CDS | 25.0% |
| ! | GATACAATTACACAACTTAA+AGG | + | chr7_3:24908538-24908557 | None:intergenic | 25.0% |
| ! | TTAAGACATTAAGTCTGATT+AGG | - | chr7_3:24908560-24908579 | Msa1098190:intron | 25.0% |
| !! | GACAATTCTAAAAGTCATTT+GGG | - | chr7_3:24908923-24908942 | Msa1098190:intron | 25.0% |
| ! | ATTGTTGAATATATGGAACT+TGG | + | chr7_3:24909131-24909150 | None:intergenic | 25.0% |
| ! | AGTAATTGTCGAATTATAGA+AGG | + | chr7_3:24909258-24909277 | None:intergenic | 25.0% |
| !! | AATTAGATTTTCTCTTTTGG+TGG | + | chr7_3:24909876-24909895 | None:intergenic | 25.0% |
| !! | AAACTTACTTATGGATTGAT+AGG | + | chr7_3:24910184-24910203 | None:intergenic | 25.0% |
| ! | GTTATGAACAAACATTTGTT+TGG | - | chr7_3:24910373-24910392 | Msa1098190:CDS | 25.0% |
| ! | ATTTGTTTGGAAACAACTTA+CGG | - | chr7_3:24910386-24910405 | Msa1098190:intron | 25.0% |
| CTTAAGAAGAATTCTCTTTG+AGG | + | chr7_3:24907215-24907234 | None:intergenic | 30.0% | |
| !!! | ATTGTGCTATTTTCTTATGC+AGG | - | chr7_3:24907394-24907413 | Msa1098190:three_prime_UTR | 30.0% |
| GTACAGTATCAGTTTGATAA+AGG | - | chr7_3:24907723-24907742 | Msa1098190:CDS | 30.0% | |
| AACGTCGCAATATTTATTGT+TGG | - | chr7_3:24907782-24907801 | Msa1098190:CDS | 30.0% | |
| CGTACATACATAACAAATCA+TGG | - | chr7_3:24907914-24907933 | Msa1098190:intron | 30.0% | |
| TAAGTAATCTTGATCGTTGA+TGG | + | chr7_3:24907969-24907988 | None:intergenic | 30.0% | |
| GAAAGAAGTTATATGGTCAA+TGG | - | chr7_3:24908138-24908157 | Msa1098190:intron | 30.0% | |
| TTCTCAAATTGTTGTAAAGG+TGG | - | chr7_3:24908280-24908299 | Msa1098190:CDS | 30.0% | |
| !!! | AAACCAACACGAGTTTTTTT+CGG | - | chr7_3:24908633-24908652 | Msa1098190:intron | 30.0% |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr7_3:24908771-24908790 | None:intergenic | 30.0% |
| !!! | AAGAAGATGCATCTTGTTTT+CGG | - | chr7_3:24908773-24908792 | Msa1098190:intron | 30.0% |
| !!! | CTTTGACTTGAAGCAATTTT+GGG | - | chr7_3:24908831-24908850 | Msa1098190:intron | 30.0% |
| ! | CGACAATTCTAAAAGTCATT+TGG | - | chr7_3:24908922-24908941 | Msa1098190:intron | 30.0% |
| TATGTAGAACAAAAAGACAC+AGG | - | chr7_3:24909025-24909044 | Msa1098190:intron | 30.0% | |
| TGTAACGAAATGTGTGAAAA+AGG | - | chr7_3:24909054-24909073 | Msa1098190:intron | 30.0% | |
| TTGAATATATGGAACTTGGA+GGG | + | chr7_3:24909127-24909146 | None:intergenic | 30.0% | |
| AAAATTAGGACTAAACCAAC+TGG | - | chr7_3:24909384-24909403 | Msa1098190:intron | 30.0% | |
| !!! | GATTCAATCAGTTTTTTGGT+TGG | - | chr7_3:24909425-24909444 | Msa1098190:intron | 30.0% |
| ! | TCGAGAATCAACTAGATTTT+TGG | - | chr7_3:24909592-24909611 | Msa1098190:intron | 30.0% |
| !!! | GAATCAACTAGATTTTTGGT+TGG | - | chr7_3:24909596-24909615 | Msa1098190:intron | 30.0% |
| TGAATCAAAAGAGATATCAC+CGG | - | chr7_3:24909797-24909816 | Msa1098190:intron | 30.0% | |
| ! | ATTTTCTCAAATGTGTATGC+AGG | - | chr7_3:24909896-24909915 | Msa1098190:intron | 30.0% |
| ! | TTTTCTCAAATGTGTATGCA+GGG | - | chr7_3:24909897-24909916 | Msa1098190:intron | 30.0% |
| TGAGTGACATTGTTAAGATT+TGG | + | chr7_3:24910129-24910148 | None:intergenic | 30.0% | |
| AAGCTGAAATAAGCTGAAAT+CGG | + | chr7_3:24910331-24910350 | None:intergenic | 30.0% | |
| ATTCTTCAATGATCTGTTGA+TGG | - | chr7_3:24910639-24910658 | Msa1098190:intron | 30.0% | |
| TTTCACATGACAATTCAATC+TGG | + | chr7_3:24910908-24910927 | None:intergenic | 30.0% | |
| TATTAGAGATAGAATAGCAG+AGG | + | chr7_3:24911153-24911172 | None:intergenic | 30.0% | |
| AGTCTCTTGTTCAAATTCCA+TGG | - | chr7_3:24907233-24907252 | Msa1098190:three_prime_UTR | 35.0% | |
| TATGATCCTTTGGATCCTAA+CGG | - | chr7_3:24907512-24907531 | Msa1098190:three_prime_UTR | 35.0% | |
| TTGATCGTTATGTTTCCGTT+AGG | + | chr7_3:24907530-24907549 | None:intergenic | 35.0% | |
| ACGGAAACATAACGATCAAA+TGG | - | chr7_3:24907531-24907550 | Msa1098190:three_prime_UTR | 35.0% | |
| CGGAAACATAACGATCAAAT+GGG | - | chr7_3:24907532-24907551 | Msa1098190:three_prime_UTR | 35.0% | |
| TCGCAATATTTATTGTTGGC+CGG | - | chr7_3:24907786-24907805 | Msa1098190:CDS | 35.0% | |
| GATCTATGATTTAGATACCC+CGG | + | chr7_3:24907808-24907827 | None:intergenic | 35.0% | |
| GGGTATCTAAATCATAGATC+TGG | - | chr7_3:24907808-24907827 | Msa1098190:CDS | 35.0% | |
| TTTCATATTATACCAGGCAG+CGG | - | chr7_3:24908042-24908061 | Msa1098190:intron | 35.0% | |
| TGAGCAATTTCCAAATGTAC+CGG | - | chr7_3:24908071-24908090 | Msa1098190:intron | 35.0% | |
| GGGCTAAGAAAGAAGTTATA+TGG | - | chr7_3:24908131-24908150 | Msa1098190:intron | 35.0% | |
| GAAGTTATATGGTCAATGGT+AGG | - | chr7_3:24908142-24908161 | Msa1098190:intron | 35.0% | |
| ! | GGAGATTGCTCTAAATTCAA+AGG | - | chr7_3:24908184-24908203 | Msa1098190:intron | 35.0% |
| GGAAATGCTTAAAGTTGTCT+GGG | + | chr7_3:24908601-24908620 | None:intergenic | 35.0% | |
| !! | AAAACTCGTGTTGGTTTAGA+GGG | + | chr7_3:24908630-24908649 | None:intergenic | 35.0% |
| !! | AAAAACTCGTGTTGGTTTAG+AGG | + | chr7_3:24908631-24908650 | None:intergenic | 35.0% |
| !!! | ACTTGGAGCAATTTTGAGAT+GGG | + | chr7_3:24908709-24908728 | None:intergenic | 35.0% |
| ACAATTAAGCGTGTTTGACT+TGG | + | chr7_3:24908726-24908745 | None:intergenic | 35.0% | |
| AAGTCAAACACGCTTAATTG+TGG | - | chr7_3:24908725-24908744 | Msa1098190:intron | 35.0% | |
| GCTTAATTGTGGAGTTCTTA+TGG | - | chr7_3:24908736-24908755 | Msa1098190:intron | 35.0% | |
| ATTGTGGAGTTCTTATGGTT+TGG | - | chr7_3:24908741-24908760 | Msa1098190:intron | 35.0% | |
| TTGTGGAGTTCTTATGGTTT+GGG | - | chr7_3:24908742-24908761 | Msa1098190:intron | 35.0% | |
| !!! | GCTTTGACTTGAAGCAATTT+TGG | - | chr7_3:24908830-24908849 | Msa1098190:intron | 35.0% |
| !!! | ACTTGAAGCAATTTTGGGAT+GGG | - | chr7_3:24908836-24908855 | Msa1098190:intron | 35.0% |
| GAATGTGTGAAAATGGGTAA+AGG | + | chr7_3:24908961-24908980 | None:intergenic | 35.0% | |
| AAAAGGTAACAGTGTACACA+TGG | - | chr7_3:24909071-24909090 | Msa1098190:intron | 35.0% | |
| TGAATATATGGAACTTGGAG+GGG | + | chr7_3:24909126-24909145 | None:intergenic | 35.0% | |
| GTTGAATATATGGAACTTGG+AGG | + | chr7_3:24909128-24909147 | None:intergenic | 35.0% | |
| TTCTATTTCATGCAGTGACA+TGG | - | chr7_3:24909165-24909184 | Msa1098190:CDS | 35.0% | |
| GACAAAGATACACAACAACT+TGG | + | chr7_3:24909233-24909252 | None:intergenic | 35.0% | |
| TGACACAATTCTTCTTGTTC+TGG | + | chr7_3:24909307-24909326 | None:intergenic | 35.0% | |
| CCAAAAAACTGATTGAATCC+CGG | + | chr7_3:24909424-24909443 | None:intergenic | 35.0% | |
| ATCCTGATTGTACCACAATT+CGG | - | chr7_3:24909452-24909471 | Msa1098190:intron | 35.0% | |
| TTTCTCAAATGTGTATGCAG+GGG | - | chr7_3:24909898-24909917 | Msa1098190:intron | 35.0% | |
| AATGGTTCATTGTCTCTCTT+TGG | + | chr7_3:24909961-24909980 | None:intergenic | 35.0% | |
| AGACCAACTATAAGGACTAT+TGG | - | chr7_3:24910031-24910050 | Msa1098190:CDS | 35.0% | |
| TCTCCAATAGTCCTTATAGT+TGG | + | chr7_3:24910037-24910056 | None:intergenic | 35.0% | |
| ATGTTGTATACAGATGACAC+TGG | - | chr7_3:24910598-24910617 | Msa1098190:intron | 35.0% | |
| TCTGATTGAACATTTCCACT+TGG | + | chr7_3:24910673-24910692 | None:intergenic | 35.0% | |
| AGTGCTTCTTCAAAAGAACA+AGG | - | chr7_3:24910693-24910712 | Msa1098190:intron | 35.0% | |
| CATTCACAGGTGAAGAATTA+GGG | + | chr7_3:24910816-24910835 | None:intergenic | 35.0% | |
| ACATTCACAGGTGAAGAATT+AGG | + | chr7_3:24910817-24910836 | None:intergenic | 35.0% | |
| AAATGAATGCTTGGAAGTTG+AGG | + | chr7_3:24910840-24910859 | None:intergenic | 35.0% | |
| CCAATGAGAAAATGAATGCT+TGG | + | chr7_3:24910849-24910868 | None:intergenic | 35.0% | |
| ! | CCAAGCATTCATTTTCTCAT+TGG | - | chr7_3:24910846-24910865 | Msa1098190:intron | 35.0% |
| ! | AAGCCAAGTATTGTTATCCT+CGG | - | chr7_3:24910934-24910953 | Msa1098190:intron | 35.0% |
| ATTCCGAGGATAACAATACT+TGG | + | chr7_3:24910940-24910959 | None:intergenic | 35.0% | |
| GTCTTTCATACCTGTTATTG+CGG | + | chr7_3:24910963-24910982 | None:intergenic | 35.0% | |
| !! | TCTCTTTGAGGTTCAAGTGA+TGG | + | chr7_3:24907203-24907222 | None:intergenic | 40.0% |
| TCAGCTCAATGCTATAACCA+TGG | + | chr7_3:24907253-24907272 | None:intergenic | 40.0% | |
| ! | ATGGTTATAGCATTGAGCTG+AGG | - | chr7_3:24907252-24907271 | Msa1098190:three_prime_UTR | 40.0% |
| ! | TCATCAAAGGCACATACTCA+AGG | - | chr7_3:24907340-24907359 | Msa1098190:three_prime_UTR | 40.0% |
| TATAGCTGCGTATGATCCTT+TGG | - | chr7_3:24907502-24907521 | Msa1098190:three_prime_UTR | 40.0% | |
| ATGTTTCCGTTAGGATCCAA+AGG | + | chr7_3:24907521-24907540 | None:intergenic | 40.0% | |
| TCAAATGGGATGTTGTGTCT+TGG | - | chr7_3:24907546-24907565 | Msa1098190:exon | 40.0% | |
| CGCAATATTTATTGTTGGCC+GGG | - | chr7_3:24907787-24907806 | Msa1098190:CDS | 40.0% | |
| GCAATATTTATTGTTGGCCG+GGG | - | chr7_3:24907788-24907807 | Msa1098190:CDS | 40.0% | |
| ! | TCATTATGTGCCGGTACATT+TGG | + | chr7_3:24908084-24908103 | None:intergenic | 40.0% |
| ATGGACATTAGGATGGTCAT+GGG | - | chr7_3:24908111-24908130 | Msa1098190:intron | 40.0% | |
| ! | GGAGTTTTCTTGCAACAATG+AGG | + | chr7_3:24908217-24908236 | None:intergenic | 40.0% |
| GTTGATTGTAAGGTACACCA+GGG | + | chr7_3:24908258-24908277 | None:intergenic | 40.0% | |
| ! | TGTTGATTGTAAGGTACACC+AGG | + | chr7_3:24908259-24908278 | None:intergenic | 40.0% |
| TCAGCTTTCCAAGTTAGTGT+TGG | - | chr7_3:24908343-24908362 | Msa1098190:CDS | 40.0% | |
| CCAAGAGAGTGAAGTTCTTA+GGG | + | chr7_3:24908402-24908421 | None:intergenic | 40.0% | |
| CGGAAATGCTTAAAGTTGTC+TGG | + | chr7_3:24908602-24908621 | None:intergenic | 40.0% | |
| !! | GACTTGGAGCAATTTTGAGA+TGG | + | chr7_3:24908710-24908729 | None:intergenic | 40.0% |
| GCTTAACTGTGGAGTTCTTA+TGG | + | chr7_3:24908808-24908827 | None:intergenic | 40.0% | |
| !! | GACTTGAAGCAATTTTGGGA+TGG | - | chr7_3:24908835-24908854 | Msa1098190:intron | 40.0% |
| TGACTTTCTGTGAAGTTTCC+CGG | - | chr7_3:24908859-24908878 | Msa1098190:intron | 40.0% | |
| ! | GTACACATGGTGGAACTTAA+CGG | - | chr7_3:24909084-24909103 | Msa1098190:intron | 40.0% |
| ! | ACTAAACCAACTGGTTCAAC+CGG | - | chr7_3:24909393-24909412 | Msa1098190:intron | 40.0% |
| !!! | CCGGGATTCAATCAGTTTTT+TGG | - | chr7_3:24909421-24909440 | Msa1098190:intron | 40.0% |
| AACCGAATTGTGGTACAATC+AGG | + | chr7_3:24909457-24909476 | None:intergenic | 40.0% | |
| !! | TCGTTGACTTGATTCAACCT+TGG | + | chr7_3:24909483-24909502 | None:intergenic | 40.0% |
| TTCAACCAGTTGAACTGGTT+TGG | + | chr7_3:24909572-24909591 | None:intergenic | 40.0% | |
| TTCAACCTGATTGGTGGAAT+CGG | + | chr7_3:24909629-24909648 | None:intergenic | 40.0% | |
| !! | TTCCACCAATCAGGTTGAAT+TGG | - | chr7_3:24909630-24909649 | Msa1098190:intron | 40.0% |
| !! | TCCACCAATCAGGTTGAATT+GGG | - | chr7_3:24909631-24909650 | Msa1098190:intron | 40.0% |
| AACCAACTACTGTTCAACTG+GGG | + | chr7_3:24909672-24909691 | None:intergenic | 40.0% | |
| GAACCAACTACTGTTCAACT+GGG | + | chr7_3:24909673-24909692 | None:intergenic | 40.0% | |
| TGAACCAACTACTGTTCAAC+TGG | + | chr7_3:24909674-24909693 | None:intergenic | 40.0% | |
| ! | TGAACAGTAGTTGGTTCAAC+CGG | - | chr7_3:24909676-24909695 | Msa1098190:intron | 40.0% |
| AATCAGACTAGAGATCGAAC+CGG | + | chr7_3:24909819-24909838 | None:intergenic | 40.0% | |
| TCACTCCAAATTCCTAGACA+TGG | - | chr7_3:24909921-24909940 | Msa1098190:intron | 40.0% | |
| TCCAAATTCCTAGACATGGT+AGG | - | chr7_3:24909925-24909944 | Msa1098190:intron | 40.0% | |
| CCAAATTCCTAGACATGGTA+GGG | - | chr7_3:24909926-24909945 | Msa1098190:intron | 40.0% | |
| TATGTAACCCTACCATGTCT+AGG | + | chr7_3:24909936-24909955 | None:intergenic | 40.0% | |
| GCATGTGAAGACCAACTATA+AGG | - | chr7_3:24910023-24910042 | Msa1098190:CDS | 40.0% | |
| ! | ATGGATTGATAGGCAAGCAA+AGG | + | chr7_3:24910174-24910193 | None:intergenic | 40.0% |
| AAACACTTACGAGACTGTTC+AGG | + | chr7_3:24910441-24910460 | None:intergenic | 40.0% | |
| GATGACACTGGTATGTTCTA+TGG | - | chr7_3:24910610-24910629 | Msa1098190:intron | 40.0% | |
| ! | AATGATCTGTTGATGGAAGC+TGG | - | chr7_3:24910646-24910665 | Msa1098190:intron | 40.0% |
| GAAACATTCACACTCAACCA+AGG | - | chr7_3:24910715-24910734 | Msa1098190:intron | 40.0% | |
| ATTCACACTCAACCAAGGAT+GGG | - | chr7_3:24910720-24910739 | Msa1098190:intron | 40.0% | |
| CCATTGAAGTAGACTCTTCT+AGG | + | chr7_3:24910751-24910770 | None:intergenic | 40.0% | |
| CCTAGAAGAGTCTACTTCAA+TGG | - | chr7_3:24910748-24910767 | Msa1098190:intron | 40.0% | |
| GTGAAGAATTAGGGAGGTAA+GGG | + | chr7_3:24910807-24910826 | None:intergenic | 40.0% | |
| CAGGTATGAAAGACTCTTTG+AGG | - | chr7_3:24910969-24910988 | Msa1098190:intron | 40.0% | |
| AGGCACATACTCAAGGAATG+AGG | - | chr7_3:24907347-24907366 | Msa1098190:three_prime_UTR | 45.0% | |
| ! | GTACCGGCACATAATGAATC+CGG | - | chr7_3:24908087-24908106 | Msa1098190:intron | 45.0% |
| TACCGGCACATAATGAATCC+GGG | - | chr7_3:24908088-24908107 | Msa1098190:intron | 45.0% | |
| ATCCCGGATTCATTATGTGC+CGG | + | chr7_3:24908093-24908112 | None:intergenic | 45.0% | |
| ATGAATCCGGGATGGACATT+AGG | - | chr7_3:24908100-24908119 | Msa1098190:intron | 45.0% | |
| GATGGACATTAGGATGGTCA+TGG | - | chr7_3:24908110-24908129 | Msa1098190:intron | 45.0% | |
| GGATCTCAAACAACTGAGCA+AGG | - | chr7_3:24908163-24908182 | Msa1098190:intron | 45.0% | |
| AAGCTGAAACAGCTGAGGAA+GGG | + | chr7_3:24908330-24908349 | None:intergenic | 45.0% | |
| AAAGCTGAAACAGCTGAGGA+AGG | + | chr7_3:24908331-24908350 | None:intergenic | 45.0% | |
| TTGGAAAGCTGAAACAGCTG+AGG | + | chr7_3:24908335-24908354 | None:intergenic | 45.0% | |
| CAGCTTGTCCAACACTAACT+TGG | + | chr7_3:24908354-24908373 | None:intergenic | 45.0% | |
| ! | CAAGTTAGTGTTGGACAAGC+TGG | - | chr7_3:24908352-24908371 | Msa1098190:CDS | 45.0% |
| CCCTAAGAACTTCACTCTCT+TGG | - | chr7_3:24908399-24908418 | Msa1098190:CDS | 45.0% | |
| GCCAAGAGAGTGAAGTTCTT+AGG | + | chr7_3:24908403-24908422 | None:intergenic | 45.0% | |
| GTGGAAGGAACAATCTTAGC+AGG | + | chr7_3:24908451-24908470 | None:intergenic | 45.0% | |
| CTTATCTGTGGTGAGGAAAG+TGG | + | chr7_3:24908473-24908492 | None:intergenic | 45.0% | |
| !! | TGTTGGTTTAGAGGGTCAGT+CGG | + | chr7_3:24908622-24908641 | None:intergenic | 45.0% |
| ACGCCGAAAAAAACTCGTGT+TGG | + | chr7_3:24908639-24908658 | None:intergenic | 45.0% | |
| !!! | TGGAGCAATTTTGAGATGGG+TGG | + | chr7_3:24908706-24908725 | None:intergenic | 45.0% |
| AGTCAAAGCACGCTTAACTG+TGG | + | chr7_3:24908819-24908838 | None:intergenic | 45.0% | |
| AGGTAACAGTGTACACATGG+TGG | - | chr7_3:24909074-24909093 | Msa1098190:intron | 45.0% | |
| TGGAGGGGAATTCGATACAT+AGG | + | chr7_3:24909111-24909130 | None:intergenic | 45.0% | |
| TGATTGAATCCCGGTTCAAC+CGG | + | chr7_3:24909415-24909434 | None:intergenic | 45.0% | |
| ACCACAATTCGGTTGAACCA+AGG | - | chr7_3:24909463-24909482 | Msa1098190:intron | 45.0% | |
| ACCTTGGTTCAACCGAATTG+TGG | + | chr7_3:24909467-24909486 | None:intergenic | 45.0% | |
| TCGAACCAAACCAGTTCAAC+TGG | - | chr7_3:24909564-24909583 | Msa1098190:intron | 45.0% | |
| CTCGATTCAACCAGTTGAAC+TGG | + | chr7_3:24909577-24909596 | None:intergenic | 45.0% | |
| TAATCCCGATTCCACCAATC+AGG | - | chr7_3:24909621-24909640 | Msa1098190:intron | 45.0% | |
| TCAACCTGATTGGTGGAATC+GGG | + | chr7_3:24909628-24909647 | None:intergenic | 45.0% | |
| !! | CCACCAATCAGGTTGAATTG+GGG | - | chr7_3:24909632-24909651 | Msa1098190:intron | 45.0% |
| CAACCCCAATTCAACCTGAT+TGG | + | chr7_3:24909638-24909657 | None:intergenic | 45.0% | |
| AACCCCAGTTGAACAGTAGT+TGG | - | chr7_3:24909667-24909686 | Msa1098190:intron | 45.0% | |
| CCCTACCATGTCTAGGAATT+TGG | + | chr7_3:24909929-24909948 | None:intergenic | 45.0% | |
| CCTAATGGGGCACATATGAT+GGG | + | chr7_3:24909995-24910014 | None:intergenic | 45.0% | |
| CCATCATATGTGCCCCATTA+GGG | - | chr7_3:24909993-24910012 | Msa1098190:CDS | 45.0% | |
| ACATGCCAGTGTACCCTAAT+GGG | + | chr7_3:24910009-24910028 | None:intergenic | 45.0% | |
| CATTCACACTCAACCAAGGA+TGG | - | chr7_3:24910719-24910738 | Msa1098190:intron | 45.0% | |
| ! | TTCTAGGAAATGCCCATCCT+TGG | + | chr7_3:24910735-24910754 | None:intergenic | 45.0% |
| TAAGGGTAGGTATCAGGTGA+AGG | + | chr7_3:24910790-24910809 | None:intergenic | 45.0% | |
| AGAATTAGGGAGGTAAGGGT+AGG | + | chr7_3:24910803-24910822 | None:intergenic | 45.0% | |
| GGTGAAGAATTAGGGAGGTA+AGG | + | chr7_3:24910808-24910827 | None:intergenic | 45.0% | |
| TCACAGGTGAAGAATTAGGG+AGG | + | chr7_3:24910813-24910832 | None:intergenic | 45.0% | |
| TGGAAGTTGAGGACATTCAC+AGG | + | chr7_3:24910829-24910848 | None:intergenic | 45.0% | |
| ! | TGGTTCTCTTGCTAGCTCTT+TGG | - | chr7_3:24910866-24910885 | Msa1098190:intron | 45.0% |
| GTTGTGTCTTGGACAGCAGA+TGG | - | chr7_3:24907557-24907576 | Msa1098190:exon | 50.0% | |
| TTGGACAGCAGATGGCTATG+TGG | - | chr7_3:24907565-24907584 | Msa1098190:CDS | 50.0% | |
| GGCACATAATGAATCCGGGA+TGG | - | chr7_3:24908092-24908111 | Msa1098190:intron | 50.0% | |
| ATCCGGGATGGACATTAGGA+TGG | - | chr7_3:24908104-24908123 | Msa1098190:intron | 50.0% | |
| GACCATCCTAATGTCCATCC+CGG | + | chr7_3:24908109-24908128 | None:intergenic | 50.0% | |
| GGGAGAAGGTCTACAACTGT+TGG | + | chr7_3:24908238-24908257 | None:intergenic | 50.0% | |
| ACAGTTGTAGACCTTCTCCC+TGG | - | chr7_3:24908238-24908257 | Msa1098190:intron | 50.0% | |
| TGTAAGGTACACCAGGGAGA+AGG | + | chr7_3:24908252-24908271 | None:intergenic | 50.0% | |
| AAGGTGGAGTTGTAGCAGCA+TGG | - | chr7_3:24908296-24908315 | Msa1098190:CDS | 50.0% | |
| AGGTGGAGTTGTAGCAGCAT+GGG | - | chr7_3:24908297-24908316 | Msa1098190:CDS | 50.0% | |
| AACTTCACTCTCTTGGCTCC+TGG | - | chr7_3:24908406-24908425 | Msa1098190:CDS | 50.0% | |
| ATCTGTGGTGAGGAAAGTGG+TGG | + | chr7_3:24908470-24908489 | None:intergenic | 50.0% | |
| AGTCTTGCGTCGCTTATCTG+TGG | + | chr7_3:24908485-24908504 | None:intergenic | 50.0% | |
| TTTCCGGGAAACTTCCCAGA+AGG | - | chr7_3:24908680-24908699 | Msa1098190:intron | 50.0% | |
| ! | TTTGAGATGGGTGGCCTTCT+GGG | + | chr7_3:24908697-24908716 | None:intergenic | 50.0% |
| !!! | TTTTGAGATGGGTGGCCTTC+TGG | + | chr7_3:24908698-24908717 | None:intergenic | 50.0% |
| AGTGAGGTAACACACGCTTG+TGG | - | chr7_3:24908892-24908911 | Msa1098190:intron | 50.0% | |
| GTGAGGTAACACACGCTTGT+GGG | - | chr7_3:24908893-24908912 | Msa1098190:intron | 50.0% | |
| TGAGGTAACACACGCTTGTG+GGG | - | chr7_3:24908894-24908913 | Msa1098190:intron | 50.0% | |
| GTTCAACCGGTTGAACCAGT+TGG | + | chr7_3:24909402-24909421 | None:intergenic | 50.0% | |
| ! | ACTGGTTCAACCGGTTGAAC+CGG | - | chr7_3:24909402-24909421 | Msa1098190:intron | 50.0% |
| CCCCAATTCAACCTGATTGG+TGG | + | chr7_3:24909635-24909654 | None:intergenic | 50.0% | |
| CCCATCATATGTGCCCCATT+AGG | - | chr7_3:24909992-24910011 | Msa1098190:CDS | 50.0% | |
| CCCTAATGGGGCACATATGA+TGG | + | chr7_3:24909996-24910015 | None:intergenic | 50.0% | |
| CATGCCAGTGTACCCTAATG+GGG | + | chr7_3:24910008-24910027 | None:intergenic | 50.0% | |
| CACATGCCAGTGTACCCTAA+TGG | + | chr7_3:24910010-24910029 | None:intergenic | 50.0% | |
| TTGATGGAAGCTGGACCAAG+TGG | - | chr7_3:24910655-24910674 | Msa1098190:intron | 50.0% | |
| TCCTCGGAATCCGCAATAAC+AGG | - | chr7_3:24910950-24910969 | Msa1098190:intron | 50.0% | |
| ACCTGTTATTGCGGATTCCG+AGG | + | chr7_3:24910954-24910973 | None:intergenic | 50.0% | |
| GGTGGAGTTGTAGCAGCATG+GGG | - | chr7_3:24908298-24908317 | Msa1098190:CDS | 55.0% | |
| AGTTGTAGCAGCATGGGGAC+AGG | - | chr7_3:24908303-24908322 | Msa1098190:CDS | 55.0% | |
| CCACAAGTATAGCCAGGTCC+AGG | + | chr7_3:24908427-24908446 | None:intergenic | 55.0% | |
| CCTGGACCTGGCTATACTTG+TGG | - | chr7_3:24908424-24908443 | Msa1098190:CDS | 55.0% | |
| GCAGGACCACAAGTATAGCC+AGG | + | chr7_3:24908433-24908452 | None:intergenic | 55.0% | |
| ! | GTGGTGAGGAAAGTGGTGGA+AGG | + | chr7_3:24908466-24908485 | None:intergenic | 55.0% |
| TGCGTCGCTTATCTGTGGTG+AGG | + | chr7_3:24908480-24908499 | None:intergenic | 55.0% | |
| GTCCTGACTCACACGCTTTC+CGG | - | chr7_3:24908664-24908683 | Msa1098190:intron | 55.0% | |
| TCCTGACTCACACGCTTTCC+GGG | - | chr7_3:24908665-24908684 | Msa1098190:intron | 55.0% | |
| ! | TGGCCTTCTGGGAAGTTTCC+CGG | + | chr7_3:24908686-24908705 | None:intergenic | 55.0% |
| TACCTCACTCGCACGCTTTC+CGG | + | chr7_3:24908881-24908900 | None:intergenic | 55.0% | |
| CCACAGGCACAAGAAGGACA+AGG | + | chr7_3:24909281-24909300 | None:intergenic | 55.0% | |
| CCTTGTCCTTCTTGTGCCTG+TGG | - | chr7_3:24909278-24909297 | Msa1098190:intron | 55.0% | |
| CTTCTTGTTCTGGCAGCCAC+AGG | + | chr7_3:24909297-24909316 | None:intergenic | 55.0% | |
| CTGGTTCAACCGGTTGAACC+GGG | - | chr7_3:24909403-24909422 | Msa1098190:intron | 55.0% | |
| ! | TGATGGGTGCACTGCAGCAA+TGG | + | chr7_3:24909979-24909998 | None:intergenic | 55.0% |
| TGTGCCCCATTAGGGTACAC+TGG | - | chr7_3:24910001-24910020 | Msa1098190:CDS | 55.0% | |
| GGGAGGTAAGGGTAGGTATC+AGG | + | chr7_3:24910796-24910815 | None:intergenic | 55.0% | |
| TGCTCATCGTTACCGCTGCC+TGG | + | chr7_3:24908057-24908076 | None:intergenic | 60.0% | |
| ACTCTCTTGGCTCCTGGACC+TGG | - | chr7_3:24908412-24908431 | Msa1098190:CDS | 60.0% | |
| ! | TCCCGGAAAGCGTGTGAGTC+AGG | + | chr7_3:24908669-24908688 | None:intergenic | 60.0% |
| ACCTCACTCGCACGCTTTCC+GGG | + | chr7_3:24908880-24908899 | None:intergenic | 60.0% | |
| TGGCAGCCACAGGCACAAGA+AGG | + | chr7_3:24909287-24909306 | None:intergenic | 60.0% | |
| ! | TCCCGGAAAGCGTGCGAGTG+AGG | - | chr7_3:24908876-24908895 | Msa1098190:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 24907194 | 24911259 | 24907194 | ID=Msa1098190;Name=Msa1098190 |
| chr7_3 | mRNA | 24907194 | 24911259 | 24907194 | ID=Msa1098190-mRNA-1;Parent=Msa1098190;Name=Msa1098190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=170|1|1|1|1|1|6|368|431 |
| chr7_3 | exon | 24907194 | 24907842 | 24907194 | ID=Msa1098190-mRNA-1:exon:5412;Parent=Msa1098190-mRNA-1 |
| chr7_3 | exon | 24908258 | 24908535 | 24908258 | ID=Msa1098190-mRNA-1:exon:5411;Parent=Msa1098190-mRNA-1 |
| chr7_3 | exon | 24909126 | 24909273 | 24909126 | ID=Msa1098190-mRNA-1:exon:5410;Parent=Msa1098190-mRNA-1 |
| chr7_3 | exon | 24909939 | 24910395 | 24909939 | ID=Msa1098190-mRNA-1:exon:5409;Parent=Msa1098190-mRNA-1 |
| chr7_3 | exon | 24910867 | 24910946 | 24910867 | ID=Msa1098190-mRNA-1:exon:5408;Parent=Msa1098190-mRNA-1 |
| chr7_3 | exon | 24911038 | 24911259 | 24911038 | ID=Msa1098190-mRNA-1:exon:5407;Parent=Msa1098190-mRNA-1 |
| chr7_3 | five_prime_UTR | 24911090 | 24911259 | 24911090 | ID=Msa1098190-mRNA-1:five_prime_utr;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24911038 | 24911089 | 24911038 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24910867 | 24910946 | 24910867 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24909939 | 24910395 | 24909939 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24909126 | 24909273 | 24909126 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24908258 | 24908535 | 24908258 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | CDS | 24907562 | 24907842 | 24907562 | ID=Msa1098190-mRNA-1:cds;Parent=Msa1098190-mRNA-1 |
| chr7_3 | three_prime_UTR | 24907194 | 24907561 | 24907194 | ID=Msa1098190-mRNA-1:three_prime_utr;Parent=Msa1098190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
