Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138230 | XP_013447669.1 | 98.144 | 431 | 8 | 0 | 1 | 431 | 1 | 431 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138230 | sp|Q9LFW3|COBL4_ARATH | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138230 | A0A072TW67 | 98.144 | 431 | 8 | 0 | 1 | 431 | 1 | 431 | 0.0 | 882 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043190 | Msa1138230 | 0.845446 | 4.041580e-59 | -8.615850e-47 |
| Msa0089830 | Msa1138230 | 0.808339 | 3.251994e-50 | -8.615850e-47 |
| Msa0137020 | Msa1138230 | 0.819989 | 8.690563e-53 | -8.615850e-47 |
| Msa0173780 | Msa1138230 | 0.801081 | 1.065371e-48 | -8.615850e-47 |
| Msa1050790 | Msa1138230 | 0.924085 | 1.127747e-89 | -8.615850e-47 |
| Msa1098190 | Msa1138230 | 0.902221 | 1.210072e-78 | -8.615850e-47 |
| Msa1138230 | Msa1361830 | 0.802449 | 5.579847e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138230 | MtrunA17_Chr7g0219931 | 98.144 | 431 | 8 | 0 | 1 | 431 | 1 | 431 | 0.0 | 882 |
| Msa1138230 | MtrunA17_Chr6g0455411 | 84.455 | 431 | 67 | 0 | 1 | 431 | 1 | 431 | 0.0 | 781 |
| Msa1138230 | MtrunA17_Chr2g0308371 | 69.118 | 408 | 121 | 2 | 7 | 410 | 13 | 419 | 0.0 | 633 |
| Msa1138230 | MtrunA17_Chr7g0219921 | 68.246 | 422 | 130 | 1 | 14 | 431 | 22 | 443 | 0.0 | 627 |
| Msa1138230 | MtrunA17_Chr2g0308381 | 66.590 | 434 | 137 | 2 | 3 | 428 | 18 | 451 | 0.0 | 622 |
| Msa1138230 | MtrunA17_Chr6g0455401 | 65.429 | 431 | 144 | 2 | 4 | 430 | 13 | 442 | 0.0 | 615 |
| Msa1138230 | MtrunA17_Chr6g0455391 | 65.239 | 397 | 127 | 3 | 17 | 409 | 25 | 414 | 0.0 | 558 |
| Msa1138230 | MtrunA17_Chr2g0333731 | 57.794 | 417 | 171 | 2 | 19 | 430 | 28 | 444 | 0.0 | 533 |
| Msa1138230 | MtrunA17_Chr3g0145441 | 42.630 | 441 | 219 | 11 | 3 | 427 | 33 | 455 | 3.86e-125 | 370 |
| Msa1138230 | MtrunA17_Chr2g0294901 | 28.369 | 423 | 248 | 17 | 26 | 399 | 208 | 624 | 2.21e-36 | 141 |
| Msa1138230 | MtrunA17_Chr2g0319581 | 26.269 | 453 | 265 | 18 | 27 | 426 | 226 | 662 | 8.92e-32 | 128 |
| Msa1138230 | MtrunA17_Chr5g0394101 | 26.991 | 452 | 265 | 21 | 27 | 430 | 26 | 460 | 2.12e-31 | 125 |
| Msa1138230 | MtrunA17_Chr4g0068011 | 26.573 | 429 | 247 | 20 | 26 | 399 | 204 | 619 | 3.15e-31 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138230 | AT5G15630.1 | 82.892 | 415 | 70 | 1 | 17 | 431 | 18 | 431 | 0.0 | 745 |
| Msa1138230 | AT5G15630.3 | 82.828 | 396 | 67 | 1 | 36 | 431 | 1 | 395 | 0.0 | 708 |
| Msa1138230 | AT5G15630.4 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1138230 | AT5G15630.2 | 82.768 | 383 | 65 | 1 | 49 | 431 | 1 | 382 | 0.0 | 685 |
| Msa1138230 | AT5G60920.1 | 65.647 | 425 | 140 | 2 | 1 | 419 | 18 | 442 | 0.0 | 612 |
| Msa1138230 | AT3G29810.1 | 63.781 | 439 | 148 | 3 | 1 | 430 | 1 | 437 | 0.0 | 609 |
| Msa1138230 | AT3G02210.1 | 64.747 | 434 | 140 | 5 | 7 | 428 | 16 | 448 | 0.0 | 606 |
| Msa1138230 | AT5G15630.5 | 86.378 | 323 | 44 | 0 | 17 | 339 | 18 | 340 | 0.0 | 604 |
| Msa1138230 | AT5G60920.2 | 67.342 | 395 | 123 | 2 | 31 | 419 | 1 | 395 | 0.0 | 586 |
| Msa1138230 | AT1G09790.2 | 50.856 | 409 | 193 | 5 | 3 | 407 | 8 | 412 | 4.78e-148 | 428 |
| Msa1138230 | AT1G09790.1 | 52.152 | 395 | 181 | 5 | 17 | 407 | 33 | 423 | 1.11e-146 | 425 |
| Msa1138230 | AT5G60950.1 | 53.333 | 210 | 87 | 5 | 1 | 207 | 1 | 202 | 1.41e-68 | 216 |
| Msa1138230 | AT4G16120.1 | 26.651 | 424 | 253 | 17 | 26 | 399 | 216 | 631 | 8.43e-36 | 140 |
| Msa1138230 | AT5G49270.1 | 25.714 | 455 | 277 | 19 | 27 | 428 | 216 | 662 | 6.75e-35 | 137 |
| Msa1138230 | AT4G27110.1 | 25.778 | 450 | 274 | 18 | 26 | 428 | 218 | 654 | 3.64e-30 | 123 |
| Msa1138230 | AT3G20580.1 | 25.821 | 457 | 270 | 18 | 27 | 430 | 229 | 669 | 3.84e-29 | 120 |
| Msa1138230 | AT3G16860.1 | 25.439 | 456 | 273 | 21 | 26 | 430 | 209 | 648 | 5.16e-29 | 120 |
Find 132 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGAAGTAGACTCTTCT+AGG | 0.204492 | 7_4:-7613205 | None:intergenic |
| CCCTACCATGTCTAGGAATT+TGG | 0.235761 | 7_4:-7612442 | None:intergenic |
| ACATTCACAGGTGAAGAATT+AGG | 0.246801 | 7_4:-7613271 | None:intergenic |
| ATAGATTGAATTATTCTCTT+TGG | 0.265682 | 7_4:+7612601 | Msa1138230:CDS |
| GCCAAGAGAGTGAAATTCTT+AGG | 0.266873 | 7_4:-7610997 | None:intergenic |
| ACTACAATCTTATACAAATA+AGG | 0.271232 | 7_4:+7609871 | Msa1138230:five_prime_UTR |
| GATGACACTGGTATGTTCTA+TGG | 0.291498 | 7_4:+7613067 | Msa1138230:intron |
| TCATTATGTGCCGGTACATT+TGG | 0.302315 | 7_4:-7610678 | None:intergenic |
| TGGTTCTCTTGCTAGCTCTT+TGG | 0.310873 | 7_4:+7613323 | Msa1138230:CDS |
| ACTCTCTTGGCTCCTGGCCC+TGG | 0.315922 | 7_4:+7611009 | Msa1138230:CDS |
| AATGGTTCATTGTCTCTCTT+TGG | 0.317826 | 7_4:-7612474 | None:intergenic |
| AAACTTACTTATGGATTGAT+AGG | 0.323084 | 7_4:-7612697 | None:intergenic |
| GGGAGGTAAGGGTAGGTATC+AGG | 0.323587 | 7_4:-7613250 | None:intergenic |
| CACATGCCAGTGTACCCTAA+TGG | 0.336728 | 7_4:-7612523 | None:intergenic |
| ATTCTTCAATGATCTGTTGA+TGG | 0.346271 | 7_4:+7613096 | Msa1138230:CDS |
| ACATGCCAGTGTACCCTAAT+GGG | 0.355418 | 7_4:-7612522 | None:intergenic |
| TGACACAATTCTTCTTGTTC+TGG | 0.356305 | 7_4:-7611641 | None:intergenic |
| TGAGTGACATTGTTAAGATT+TGG | 0.358767 | 7_4:-7612642 | None:intergenic |
| TTCGAGAATTGTTGATTGTA+AGG | 0.363688 | 7_4:-7610862 | None:intergenic |
| AGACACAACATCCCATTTGA+TGG | 0.368559 | 7_4:-7610136 | None:intergenic |
| CCATCATATGTGCCCCATTA+GGG | 0.375987 | 7_4:+7612509 | Msa1138230:CDS |
| TATAGCTGCGTATGATCCTT+TGG | 0.385309 | 7_4:+7610095 | Msa1138230:intron |
| CCCTAAGAATTTCACTCTCT+TGG | 0.388760 | 7_4:+7610996 | Msa1138230:CDS |
| GCATGTGAAGACCAACTATA+AGG | 0.392920 | 7_4:+7612539 | Msa1138230:CDS |
| ATGAATCCGGGATGGACATT+AGG | 0.393954 | 7_4:+7610697 | Msa1138230:CDS |
| CCCATCATATGTGCCCCATT+AGG | 0.397500 | 7_4:+7612508 | Msa1138230:CDS |
| CTTAAGAAGAATTCTCTTTG+AGG | 0.402882 | 7_4:-7609805 | None:intergenic |
| ACGGAAACATAACCATCAAA+TGG | 0.409558 | 7_4:+7610124 | Msa1138230:CDS |
| CATTCACAGGTGAAGAATTA+GGG | 0.411850 | 7_4:-7613270 | None:intergenic |
| CAGCTTGTCCAACACTAACT+TGG | 0.417677 | 7_4:-7610948 | None:intergenic |
| GGGCTAAGAAAGAAGTTATA+TGG | 0.429585 | 7_4:+7610728 | Msa1138230:CDS |
| TTTCACATGACAATTCAATC+TGG | 0.431383 | 7_4:-7613362 | None:intergenic |
| AGTAATTGTCGAATTATAGA+AGG | 0.437981 | 7_4:-7611592 | None:intergenic |
| CCTAGAAGAGTCTACTTCAA+TGG | 0.447276 | 7_4:+7613205 | Msa1138230:CDS |
| CAATTCTCGAACTGCTGTAA+AGG | 0.447375 | 7_4:+7610874 | Msa1138230:CDS |
| AATTTCACTCTCTTGGCTCC+TGG | 0.449841 | 7_4:+7611003 | Msa1138230:CDS |
| TTCTAGGAAATGCCCATCCT+TGG | 0.450855 | 7_4:-7613189 | None:intergenic |
| CTTCTTGTTCTGGCAGCCAC+AGG | 0.451368 | 7_4:-7611631 | None:intergenic |
| GTACCGGCACATAATGAATC+CGG | 0.453105 | 7_4:+7610684 | Msa1138230:CDS |
| CAAGTTAGTGTTGGACAAGC+TGG | 0.454753 | 7_4:+7610949 | Msa1138230:CDS |
| TTGATGGTTATGTTTCCGTT+AGG | 0.462896 | 7_4:-7610120 | None:intergenic |
| CGGAAACATAACCATCAAAT+GGG | 0.467948 | 7_4:+7610125 | Msa1138230:CDS |
| AATGATCTGTTGATGGAAGC+TGG | 0.476907 | 7_4:+7613103 | Msa1138230:CDS |
| GTGAAGAATTAGGGAGGTAA+GGG | 0.479660 | 7_4:-7613261 | None:intergenic |
| AGACCAACTATAAGGACTAT+TGG | 0.483874 | 7_4:+7612547 | Msa1138230:CDS |
| GGTGAAGAATTAGGGAGGTA+AGG | 0.486426 | 7_4:-7613262 | None:intergenic |
| AAATTATGATAGTATTCTGC+AGG | 0.487793 | 7_4:-7609903 | None:intergenic |
| CCAATGAGAAAATGAATGCT+TGG | 0.488052 | 7_4:-7613303 | None:intergenic |
| CCCTAATGGGGCACATATGA+TGG | 0.488059 | 7_4:-7612509 | None:intergenic |
| CCAAGAGAGTGAAATTCTTA+GGG | 0.492055 | 7_4:-7610996 | None:intergenic |
| TGTCTTCATACCTGTGGTTG+CGG | 0.504130 | 7_4:-7613417 | None:intergenic |
| AGTCTCTTATTCAAATTCCA+TGG | 0.505988 | 7_4:+7609826 | Msa1138230:five_prime_UTR |
| ATTCCGAGGATGACAATACT+TGG | 0.507399 | 7_4:-7613394 | None:intergenic |
| CATTCACACTCAACCAAGGA+TGG | 0.509638 | 7_4:+7613176 | Msa1138230:CDS |
| TCTCTTTGAGGTTCAAGAGA+TGG | 0.510731 | 7_4:-7609793 | None:intergenic |
| AGGTGGAGTTGTAGCAGCAT+GGG | 0.513354 | 7_4:+7610894 | Msa1138230:CDS |
| GAAAGAAGTTATATGGTCAA+TGG | 0.516208 | 7_4:+7610735 | Msa1138230:CDS |
| AAATGAATGCTTGGAAGTTG+AGG | 0.520645 | 7_4:-7613294 | None:intergenic |
| CCTGGCCCTGGCTATACTTG+TGG | 0.521266 | 7_4:+7611021 | Msa1138230:CDS |
| AAAGCTGAAACTGCTGATGA+AGG | 0.521395 | 7_4:-7610925 | None:intergenic |
| GTGGAAGGAACAATCTTAGC+AGG | 0.529945 | 7_4:-7611045 | None:intergenic |
| TTCTATTTCATGCAGTGACA+TGG | 0.531479 | 7_4:+7611502 | Msa1138230:intron |
| GCAGGACCACAAGTATAGCC+AGG | 0.532123 | 7_4:-7611027 | None:intergenic |
| TCCTCGGAATCCGCAACCAC+AGG | 0.534705 | 7_4:+7613407 | Msa1138230:three_prime_UTR |
| AAGGTGGAGTTGTAGCAGCA+TGG | 0.537097 | 7_4:+7610893 | Msa1138230:CDS |
| CCACAAGTATAGCCAGGGCC+AGG | 0.540168 | 7_4:-7611021 | None:intergenic |
| ACCTGTGGTTGCGGATTCCG+AGG | 0.545688 | 7_4:-7613408 | None:intergenic |
| TCTCCAATAGTCCTTATAGT+TGG | 0.547359 | 7_4:-7612550 | None:intergenic |
| CCAAATTCCTAGACATGGTA+GGG | 0.547458 | 7_4:+7612442 | Msa1138230:CDS |
| GGAGATTGCTCTAAATTCAA+AGG | 0.547885 | 7_4:+7610781 | Msa1138230:CDS |
| TCAGCTTTCCAAGTTAGTGT+TGG | 0.548625 | 7_4:+7610940 | Msa1138230:CDS |
| GGGAGAAGGTCTACAACTGT+TGG | 0.548912 | 7_4:-7610832 | None:intergenic |
| CCTTGTCCTTCTTGTGCCTG+TGG | 0.549282 | 7_4:+7611615 | Msa1138230:CDS |
| TACTAAGTGCTTGAGTCTTG+CGG | 0.549741 | 7_4:-7611092 | None:intergenic |
| AAGCCAAGTATTGTCATCCT+CGG | 0.553808 | 7_4:+7613391 | Msa1138230:three_prime_UTR |
| ATGTTTCCGTTAGGATCCAA+AGG | 0.555246 | 7_4:-7610111 | None:intergenic |
| ATCCCGGATTCATTATGTGC+CGG | 0.555425 | 7_4:-7610687 | None:intergenic |
| TGTTGATTGTAAGGTACACC+AGG | 0.555754 | 7_4:-7610853 | None:intergenic |
| GACCATCCTAATGTCCATCC+CGG | 0.556854 | 7_4:-7610703 | None:intergenic |
| GACAAAGATACACAACAACT+TGG | 0.559821 | 7_4:-7611567 | None:intergenic |
| TCAGCTCAATGCTATAACCA+TGG | 0.562594 | 7_4:-7609843 | None:intergenic |
| TATTAGAGATAGAATAGCAG+AGG | 0.563686 | 7_4:-7613604 | None:intergenic |
| GATGGACATTAGGATGGTCA+TGG | 0.563833 | 7_4:+7610707 | Msa1138230:CDS |
| TACCGGCACATAATGAATCC+GGG | 0.564236 | 7_4:+7610685 | Msa1138230:CDS |
| TCAAATGGGATGTTGTGTCT+TGG | 0.564466 | 7_4:+7610139 | Msa1138230:CDS |
| AGGCACATATTCAAAGAATG+AGG | 0.564748 | 7_4:+7609940 | Msa1138230:exon |
| TGGAAGTTGAGGACATTCAC+AGG | 0.567315 | 7_4:-7613283 | None:intergenic |
| TATGTAACCCTACCATGTCT+AGG | 0.570312 | 7_4:-7612449 | None:intergenic |
| AAGCTGAAACTGCTGATGAA+GGG | 0.572187 | 7_4:-7610924 | None:intergenic |
| TCTGATTGAACATTTCCACT+TGG | 0.576717 | 7_4:-7613127 | None:intergenic |
| GAAGTTATATGGTCAATGGT+AGG | 0.576968 | 7_4:+7610739 | Msa1138230:CDS |
| AGAATTAGGGAGGTAAGGGT+AGG | 0.577816 | 7_4:-7613257 | None:intergenic |
| CCTAATGGGGCACATATGAT+GGG | 0.578981 | 7_4:-7612508 | None:intergenic |
| TTCTCGAACTGCTGTAAAGG+TGG | 0.579569 | 7_4:+7610877 | Msa1138230:CDS |
| ACAGTTGTAGACCTTCTCCC+TGG | 0.591273 | 7_4:+7610835 | Msa1138230:CDS |
| AGTCTTGCGGCGCTTATCCG+TGG | 0.593707 | 7_4:-7611079 | None:intergenic |
| TCCAAATTCCTAGACATGGT+AGG | 0.594448 | 7_4:+7612441 | Msa1138230:CDS |
| TGAGCAATTTCCAAATGTAC+CGG | 0.595133 | 7_4:+7610668 | Msa1138230:CDS |
| TAATTTGATAACATCATCAA+AGG | 0.595516 | 7_4:+7609920 | Msa1138230:five_prime_UTR |
| ATGGATTGATAGGCAAGCAA+AGG | 0.600447 | 7_4:-7612687 | None:intergenic |
| AAGAAATTGTGAGTATGTGC+AGG | 0.603018 | 7_4:-7611532 | None:intergenic |
| TTCCACTACTTTCCTCACCA+CGG | 0.606067 | 7_4:+7611062 | Msa1138230:CDS |
| TGATGGGTGCACTGCAGCAA+TGG | 0.608565 | 7_4:-7612492 | None:intergenic |
| GGATCTCAAACAACTGAGCA+AGG | 0.609506 | 7_4:+7610760 | Msa1138230:CDS |
| TAAGGGTAGGTATCAGGTGA+AGG | 0.609655 | 7_4:-7613244 | None:intergenic |
| TGTAAGGTACACCAGGGAGA+AGG | 0.612287 | 7_4:-7610846 | None:intergenic |
| CCTCAGTGTCTTCATACCTG+TGG | 0.613261 | 7_4:-7613423 | None:intergenic |
| TGGCAGCCACAGGCACAAGA+AGG | 0.613516 | 7_4:-7611621 | None:intergenic |
| GGCACATAATGAATCCGGGA+TGG | 0.619121 | 7_4:+7610689 | Msa1138230:CDS |
| TATGATCCTTTGGATCCTAA+CGG | 0.620795 | 7_4:+7610105 | Msa1138230:CDS |
| ATCCGGGATGGACATTAGGA+TGG | 0.625045 | 7_4:+7610701 | Msa1138230:CDS |
| GTTGTGTCTTGGACAGCAGA+TGG | 0.625701 | 7_4:+7610150 | Msa1138230:CDS |
| CCACAGGCACAAGAAGGACA+AGG | 0.628997 | 7_4:-7611615 | None:intergenic |
| ATGGTTATAGCATTGAGCTG+AGG | 0.631417 | 7_4:+7609845 | Msa1138230:five_prime_UTR |
| ATTCACACTCAACCAAGGAT+GGG | 0.632798 | 7_4:+7613177 | Msa1138230:CDS |
| ATGGACATTAGGATGGTCAT+GGG | 0.635614 | 7_4:+7610708 | Msa1138230:CDS |
| TGCGGCGCTTATCCGTGGTG+AGG | 0.638044 | 7_4:-7611074 | None:intergenic |
| AATTATGATAGTATTCTGCA+GGG | 0.642071 | 7_4:-7609902 | None:intergenic |
| TCACTCCAAATTCCTAGACA+TGG | 0.655074 | 7_4:+7612437 | Msa1138230:CDS |
| GGTGGAGTTGTAGCAGCATG+GGG | 0.655728 | 7_4:+7610895 | Msa1138230:CDS |
| AGTGCTTCTTCAAAAGAACA+AGG | 0.656475 | 7_4:+7613150 | Msa1138230:CDS |
| ATCCGTGGTGAGGAAAGTAG+TGG | 0.665771 | 7_4:-7611064 | None:intergenic |
| CAGGACCACAAGTATAGCCA+GGG | 0.667362 | 7_4:-7611026 | None:intergenic |
| CATGCCAGTGTACCCTAATG+GGG | 0.668279 | 7_4:-7612521 | None:intergenic |
| GTGGTGAGGAAAGTAGTGGA+AGG | 0.671428 | 7_4:-7611060 | None:intergenic |
| GAAACATTCACACTCAACCA+AGG | 0.672658 | 7_4:+7613172 | Msa1138230:CDS |
| ATGTTGTATACAGATGACAC+TGG | 0.674076 | 7_4:+7613055 | Msa1138230:intron |
| TTGATGGAAGCTGGACCAAG+TGG | 0.686970 | 7_4:+7613112 | Msa1138230:CDS |
| GTTGATTGTAAGGTACACCA+GGG | 0.694046 | 7_4:-7610852 | None:intergenic |
| TTGGACAGCAGATGGCTATG+TGG | 0.698211 | 7_4:+7610158 | Msa1138230:CDS |
| TCACAGGTGAAGAATTAGGG+AGG | 0.715117 | 7_4:-7613267 | None:intergenic |
| CCACAGGTATGAAGACACTG+AGG | 0.808474 | 7_4:+7613423 | Msa1138230:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAATAAATAAATAAAT+AGG | - | chr7_4:7612256-7612275 | None:intergenic | 0.0% |
| !!! | ATAATTTTTAAAATTAAGTG+GGG | + | chr7_4:7611850-7611869 | Msa1138230:intron | 10.0% |
| !!! | TGAAAATTAATTTTTTATTG+GGG | + | chr7_4:7611943-7611962 | Msa1138230:intron | 10.0% |
| !! | TTATTTATTTATTAGTCATT+CGG | + | chr7_4:7612262-7612281 | Msa1138230:intron | 10.0% |
| !!! | TTTCACTTAAACAATTTTTT+TGG | + | chr7_4:7610021-7610040 | Msa1138230:intron | 15.0% |
| !! | ATACTATTATCAAACAAATA+AGG | - | chr7_4:7610200-7610219 | None:intergenic | 15.0% |
| !!! | AGATCATTTAAGTTTTATAA+CGG | - | chr7_4:7611256-7611275 | None:intergenic | 15.0% |
| !! | GGTACAATTAAATAAATTAA+AGG | + | chr7_4:7611396-7611415 | Msa1138230:intron | 15.0% |
| !!! | CTAAGTAATGTTTTAAAATT+AGG | + | chr7_4:7611707-7611726 | Msa1138230:intron | 15.0% |
| !!! | AATTTTAAAAATTATTAGGC+CGG | - | chr7_4:7611845-7611864 | None:intergenic | 15.0% |
| !!! | CATATATTCAATTTTGATTT+AGG | - | chr7_4:7611876-7611895 | None:intergenic | 15.0% |
| !! | AAATCAAAATTGAATATATG+AGG | + | chr7_4:7611876-7611895 | Msa1138230:intron | 15.0% |
| !!! | ATTAGATTTTACAAGAAAAA+AGG | - | chr7_4:7611924-7611943 | None:intergenic | 15.0% |
| !!! | GAAAATTAATTTTTTATTGG+GGG | + | chr7_4:7611944-7611963 | Msa1138230:intron | 15.0% |
| !!! | AAAATTAATTTTTTATTGGG+GGG | + | chr7_4:7611945-7611964 | Msa1138230:intron | 15.0% |
| !! | AAAAATGCAAAAATAAAAAC+TGG | - | chr7_4:7612211-7612230 | None:intergenic | 15.0% |
| !!! | AATAATTAGATTTTCTCTTT+TGG | - | chr7_4:7612388-7612407 | None:intergenic | 15.0% |
| !!! | ATATATCTAAAACTTACTTA+TGG | - | chr7_4:7612709-7612728 | None:intergenic | 15.0% |
| !! | ACTACAATCTTATACAAATA+AGG | + | chr7_4:7609871-7609890 | Msa1138230:five_prime_UTR | 20.0% |
| !!! | TAATTTGATAACATCATCAA+AGG | + | chr7_4:7609920-7609939 | Msa1138230:five_prime_UTR | 20.0% |
| !! | ATACGAATATGAAAATGAAA+AGG | - | chr7_4:7610047-7610066 | None:intergenic | 20.0% |
| !! | GTATAATATCAGTTTGATAA+AGG | + | chr7_4:7610361-7610380 | Msa1138230:intron | 20.0% |
| !! | ATATAACGTTGCAATATTTA+CGG | + | chr7_4:7610416-7610435 | Msa1138230:intron | 20.0% |
| !!! | ATTTTGTTACAAAAATACCT+AGG | + | chr7_4:7611227-7611246 | Msa1138230:intron | 20.0% |
| !! | AACTTAAATGATCTATATGT+AGG | + | chr7_4:7611262-7611281 | Msa1138230:intron | 20.0% |
| !! | AAAAACTTAAAGAACTAATC+TGG | + | chr7_4:7611375-7611394 | Msa1138230:intron | 20.0% |
| !! | AGAATTGTTGAATGAATATA+GGG | - | chr7_4:7611465-7611484 | None:intergenic | 20.0% |
| !! | TAGAATTGTTGAATGAATAT+AGG | - | chr7_4:7611466-7611485 | None:intergenic | 20.0% |
| !!! | TATTTTCTCAAATGTTGATA+TGG | + | chr7_4:7612404-7612423 | Msa1138230:intron | 20.0% |
| !! | ATAGATTGAATTATTCTCTT+TGG | + | chr7_4:7612601-7612620 | Msa1138230:CDS | 20.0% |
| !! | ATATCAAGAATAGTTATAGT+TGG | + | chr7_4:7612725-7612744 | Msa1138230:intron | 20.0% |
| !! | TTTACATAAGTCAAAAATCT+TGG | - | chr7_4:7613562-7613581 | None:intergenic | 20.0% |
| ! | AATTATGATAGTATTCTGCA+GGG | - | chr7_4:7609905-7609924 | None:intergenic | 25.0% |
| ! | AAATTATGATAGTATTCTGC+AGG | - | chr7_4:7609906-7609925 | None:intergenic | 25.0% |
| !! | AGTTCTTTTCACGAATTTAT+GGG | - | chr7_4:7610230-7610249 | None:intergenic | 25.0% |
| !! | AAGTTCTTTTCACGAATTTA+TGG | - | chr7_4:7610231-7610250 | None:intergenic | 25.0% |
| !! | TTAGACCTACATCAATTTTA+TGG | + | chr7_4:7610331-7610350 | Msa1138230:intron | 25.0% |
| ! | TTGATCCATAAAATTGATGT+AGG | - | chr7_4:7610339-7610358 | None:intergenic | 25.0% |
| ! | ACTATTGATGAATAAATCAG+AGG | + | chr7_4:7610518-7610537 | Msa1138230:intron | 25.0% |
| ! | TATACATTGCATATTAAACC+AGG | + | chr7_4:7610633-7610652 | Msa1138230:intron | 25.0% |
| !!! | TATGATTAGTCTTTTTAGTC+TGG | + | chr7_4:7611173-7611192 | Msa1138230:intron | 25.0% |
| ! | GTAACAAAATGTGTGATAAA+GGG | - | chr7_4:7611217-7611236 | None:intergenic | 25.0% |
| ! | TGTAACAAAATGTGTGATAA+AGG | - | chr7_4:7611218-7611237 | None:intergenic | 25.0% |
| ! | AGTAATTGTCGAATTATAGA+AGG | - | chr7_4:7611595-7611614 | None:intergenic | 25.0% |
| !!! | AATTCAGACATTTTTTTGGT+TGG | + | chr7_4:7611762-7611781 | Msa1138230:intron | 25.0% |
| !!! | ATATATGAGGCCTTTTTTAT+TGG | + | chr7_4:7611889-7611908 | Msa1138230:intron | 25.0% |
| !! | AATTAGATTTTCTCTTTTGG+TGG | - | chr7_4:7612385-7612404 | None:intergenic | 25.0% |
| !! | AAACTTACTTATGGATTGAT+AGG | - | chr7_4:7612700-7612719 | None:intergenic | 25.0% |
| ! | TTAGAACATAAGCTGAAAAT+CGG | - | chr7_4:7612847-7612866 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCAAAAC+AGG | + | chr7_4:7612924-7612943 | Msa1138230:intron | 25.0% |
| CTTAAGAAGAATTCTCTTTG+AGG | - | chr7_4:7609808-7609827 | None:intergenic | 30.0% | |
| AGTCTCTTATTCAAATTCCA+TGG | + | chr7_4:7609826-7609845 | Msa1138230:five_prime_UTR | 30.0% | |
| ! | TTCGTATTCAACTGATTTCT+TGG | + | chr7_4:7610060-7610079 | Msa1138230:intron | 30.0% |
| ! | GTTCTTTTCACGAATTTATG+GGG | - | chr7_4:7610229-7610248 | None:intergenic | 30.0% |
| ! | TCGTGAAAAGAACTTTTACA+TGG | + | chr7_4:7610236-7610255 | Msa1138230:intron | 30.0% |
| GGGTATCTAAATTATAGATC+TGG | + | chr7_4:7610446-7610465 | Msa1138230:intron | 30.0% | |
| TAAGTAATCTTGATCGTTGA+TGG | - | chr7_4:7610609-7610628 | None:intergenic | 30.0% | |
| GAAAGAAGTTATATGGTCAA+TGG | + | chr7_4:7610735-7610754 | Msa1138230:CDS | 30.0% | |
| ! | TTCGAGAATTGTTGATTGTA+AGG | - | chr7_4:7610865-7610884 | None:intergenic | 30.0% |
| AGTAAGTTTGATATCTGCAT+AGG | + | chr7_4:7611111-7611130 | Msa1138230:intron | 30.0% | |
| TGTAACGAAATGTGTGAAAA+AGG | + | chr7_4:7611305-7611324 | Msa1138230:intron | 30.0% | |
| GTAACGAAATGTGTGAAAAA+GGG | + | chr7_4:7611306-7611325 | Msa1138230:intron | 30.0% | |
| !!! | AAGTTTTTTCTATCCTACGT+AGG | - | chr7_4:7611363-7611382 | None:intergenic | 30.0% |
| TTGAATGAATATAGGGAACT+TGG | - | chr7_4:7611458-7611477 | None:intergenic | 30.0% | |
| AAAATTAGGACTAAACCAAC+TGG | + | chr7_4:7611721-7611740 | Msa1138230:intron | 30.0% | |
| CCAAAAAAATGTCTGAATTC+CGG | - | chr7_4:7611761-7611780 | None:intergenic | 30.0% | |
| !!! | GCCTTTTTTATTGGAATATG+AGG | + | chr7_4:7611898-7611917 | Msa1138230:intron | 30.0% |
| GCCTCATATTCCAATAAAAA+AGG | - | chr7_4:7611902-7611921 | None:intergenic | 30.0% | |
| ! | TCGAGAATCAACTAGATTTT+TGG | + | chr7_4:7612105-7612124 | Msa1138230:intron | 30.0% |
| !!! | GAATCAACTAGATTTTTGGT+TGG | + | chr7_4:7612109-7612128 | Msa1138230:intron | 30.0% |
| TGAATCAAAAGAGATATCAC+CGG | + | chr7_4:7612306-7612325 | Msa1138230:intron | 30.0% | |
| AAATGTTGATATGGTATGCA+GGG | + | chr7_4:7612413-7612432 | Msa1138230:intron | 30.0% | |
| TGAGTGACATTGTTAAGATT+TGG | - | chr7_4:7612645-7612664 | None:intergenic | 30.0% | |
| ATTCTTCAATGATCTGTTGA+TGG | + | chr7_4:7613096-7613115 | Msa1138230:CDS | 30.0% | |
| TTTCACATGACAATTCAATC+TGG | - | chr7_4:7613365-7613384 | None:intergenic | 30.0% | |
| TATTAGAGATAGAATAGCAG+AGG | - | chr7_4:7613607-7613626 | None:intergenic | 30.0% | |
| AGGCACATATTCAAAGAATG+AGG | + | chr7_4:7609940-7609959 | Msa1138230:exon | 35.0% | |
| !!! | ACTGTGCTATTTTCTTATGC+AGG | + | chr7_4:7609987-7610006 | Msa1138230:CDS | 35.0% |
| TATGATCCTTTGGATCCTAA+CGG | + | chr7_4:7610105-7610124 | Msa1138230:CDS | 35.0% | |
| ! | TTGATGGTTATGTTTCCGTT+AGG | - | chr7_4:7610123-7610142 | None:intergenic | 35.0% |
| ACGGAAACATAACCATCAAA+TGG | + | chr7_4:7610124-7610143 | Msa1138230:CDS | 35.0% | |
| CGGAAACATAACCATCAAAT+GGG | + | chr7_4:7610125-7610144 | Msa1138230:CDS | 35.0% | |
| AACGTTGCAATATTTACGGT+TGG | + | chr7_4:7610420-7610439 | Msa1138230:intron | 35.0% | |
| ACGTTGCAATATTTACGGTT+GGG | + | chr7_4:7610421-7610440 | Msa1138230:intron | 35.0% | |
| TGAGCAATTTCCAAATGTAC+CGG | + | chr7_4:7610668-7610687 | Msa1138230:CDS | 35.0% | |
| GGGCTAAGAAAGAAGTTATA+TGG | + | chr7_4:7610728-7610747 | Msa1138230:CDS | 35.0% | |
| GAAGTTATATGGTCAATGGT+AGG | + | chr7_4:7610739-7610758 | Msa1138230:CDS | 35.0% | |
| ! | GGAGATTGCTCTAAATTCAA+AGG | + | chr7_4:7610781-7610800 | Msa1138230:CDS | 35.0% |
| CCAAGAGAGTGAAATTCTTA+GGG | - | chr7_4:7610999-7611018 | None:intergenic | 35.0% | |
| CATAGGCAAAATACATTGTG+CGG | + | chr7_4:7611128-7611147 | Msa1138230:intron | 35.0% | |
| !!! | AAGTTTTATAACGGACACCT+AGG | - | chr7_4:7611247-7611266 | None:intergenic | 35.0% |
| GTACACATAGAGGAACTTAA+CGG | + | chr7_4:7611336-7611355 | Msa1138230:intron | 35.0% | |
| TACACATAGAGGAACTTAAC+GGG | + | chr7_4:7611337-7611356 | Msa1138230:intron | 35.0% | |
| TTCTATTTCATGCAGTGACA+TGG | + | chr7_4:7611502-7611521 | Msa1138230:intron | 35.0% | |
| AAGAAATTGTGAGTATGTGC+AGG | - | chr7_4:7611535-7611554 | None:intergenic | 35.0% | |
| GACAAAGATACACAACAACT+TGG | - | chr7_4:7611570-7611589 | None:intergenic | 35.0% | |
| TGACACAATTCTTCTTGTTC+TGG | - | chr7_4:7611644-7611663 | None:intergenic | 35.0% | |
| !!! | CCGGAATTCAGACATTTTTT+TGG | + | chr7_4:7611758-7611777 | Msa1138230:intron | 35.0% |
| ATCCTGATTGTACCACAATT+CGG | + | chr7_4:7611789-7611808 | Msa1138230:intron | 35.0% | |
| CAAATGTTGATATGGTATGC+AGG | + | chr7_4:7612412-7612431 | Msa1138230:intron | 35.0% | |
| AATGTTGATATGGTATGCAG+GGG | + | chr7_4:7612414-7612433 | Msa1138230:intron | 35.0% | |
| AATGGTTCATTGTCTCTCTT+TGG | - | chr7_4:7612477-7612496 | None:intergenic | 35.0% | |
| AGACCAACTATAAGGACTAT+TGG | + | chr7_4:7612547-7612566 | Msa1138230:CDS | 35.0% | |
| TCTCCAATAGTCCTTATAGT+TGG | - | chr7_4:7612553-7612572 | None:intergenic | 35.0% | |
| ATGTTGTATACAGATGACAC+TGG | + | chr7_4:7613055-7613074 | Msa1138230:intron | 35.0% | |
| TCTGATTGAACATTTCCACT+TGG | - | chr7_4:7613130-7613149 | None:intergenic | 35.0% | |
| AGTGCTTCTTCAAAAGAACA+AGG | + | chr7_4:7613150-7613169 | Msa1138230:CDS | 35.0% | |
| CATTCACAGGTGAAGAATTA+GGG | - | chr7_4:7613273-7613292 | None:intergenic | 35.0% | |
| ACATTCACAGGTGAAGAATT+AGG | - | chr7_4:7613274-7613293 | None:intergenic | 35.0% | |
| AAATGAATGCTTGGAAGTTG+AGG | - | chr7_4:7613297-7613316 | None:intergenic | 35.0% | |
| CCAATGAGAAAATGAATGCT+TGG | - | chr7_4:7613306-7613325 | None:intergenic | 35.0% | |
| ! | CCAAGCATTCATTTTCTCAT+TGG | + | chr7_4:7613303-7613322 | Msa1138230:CDS | 35.0% |
| !! | TCTCTTTGAGGTTCAAGAGA+TGG | - | chr7_4:7609796-7609815 | None:intergenic | 40.0% |
| TCAGCTCAATGCTATAACCA+TGG | - | chr7_4:7609846-7609865 | None:intergenic | 40.0% | |
| ! | ATGGTTATAGCATTGAGCTG+AGG | + | chr7_4:7609845-7609864 | Msa1138230:five_prime_UTR | 40.0% |
| TATAGCTGCGTATGATCCTT+TGG | + | chr7_4:7610095-7610114 | Msa1138230:intron | 40.0% | |
| ATGTTTCCGTTAGGATCCAA+AGG | - | chr7_4:7610114-7610133 | None:intergenic | 40.0% | |
| AGACACAACATCCCATTTGA+TGG | - | chr7_4:7610139-7610158 | None:intergenic | 40.0% | |
| TCAAATGGGATGTTGTGTCT+TGG | + | chr7_4:7610139-7610158 | Msa1138230:CDS | 40.0% | |
| TTGCAATATTTACGGTTGGG+CGG | + | chr7_4:7610424-7610443 | Msa1138230:intron | 40.0% | |
| CAGAAGTTAGCAACTCACTT+TGG | + | chr7_4:7610474-7610493 | Msa1138230:intron | 40.0% | |
| TTGCATATTAAACCAGGCAG+CGG | + | chr7_4:7610639-7610658 | Msa1138230:intron | 40.0% | |
| ! | TCATTATGTGCCGGTACATT+TGG | - | chr7_4:7610681-7610700 | None:intergenic | 40.0% |
| ATGGACATTAGGATGGTCAT+GGG | + | chr7_4:7610708-7610727 | Msa1138230:CDS | 40.0% | |
| ! | GGAGTTTTCTTGCAACAATG+AGG | - | chr7_4:7610814-7610833 | None:intergenic | 40.0% |
| GTTGATTGTAAGGTACACCA+GGG | - | chr7_4:7610855-7610874 | None:intergenic | 40.0% | |
| ! | TGTTGATTGTAAGGTACACC+AGG | - | chr7_4:7610856-7610875 | None:intergenic | 40.0% |
| CAATTCTCGAACTGCTGTAA+AGG | + | chr7_4:7610874-7610893 | Msa1138230:CDS | 40.0% | |
| AAGCTGAAACTGCTGATGAA+GGG | - | chr7_4:7610927-7610946 | None:intergenic | 40.0% | |
| AAAGCTGAAACTGCTGATGA+AGG | - | chr7_4:7610928-7610947 | None:intergenic | 40.0% | |
| TCAGCTTTCCAAGTTAGTGT+TGG | + | chr7_4:7610940-7610959 | Msa1138230:CDS | 40.0% | |
| CCCTAAGAATTTCACTCTCT+TGG | + | chr7_4:7610996-7611015 | Msa1138230:CDS | 40.0% | |
| GCCAAGAGAGTGAAATTCTT+AGG | - | chr7_4:7611000-7611019 | None:intergenic | 40.0% | |
| TACTAAGTGCTTGAGTCTTG+CGG | - | chr7_4:7611095-7611114 | None:intergenic | 40.0% | |
| !! | GTCTTTTTAGTCTGGCTACA+TGG | + | chr7_4:7611181-7611200 | Msa1138230:intron | 40.0% |
| TGTCTGAATTCCGGTTCAAT+CGG | - | chr7_4:7611752-7611771 | None:intergenic | 40.0% | |
| AACCGAATTGTGGTACAATC+AGG | - | chr7_4:7611794-7611813 | None:intergenic | 40.0% | |
| CCAAGGTTGAATCAAGTGAA+CGG | + | chr7_4:7611817-7611836 | Msa1138230:intron | 40.0% | |
| CAAGGTTGAATCAAGTGAAC+GGG | + | chr7_4:7611818-7611837 | Msa1138230:intron | 40.0% | |
| AAGGTTGAATCAAGTGAACG+GGG | + | chr7_4:7611819-7611838 | Msa1138230:intron | 40.0% | |
| TTCAACCAGTTGAACTGGTT+TGG | - | chr7_4:7612085-7612104 | None:intergenic | 40.0% | |
| TTCAACCTGATTGGTGGAAT+CGG | - | chr7_4:7612142-7612161 | None:intergenic | 40.0% | |
| !! | TTCCACCAATCAGGTTGAAT+TGG | + | chr7_4:7612143-7612162 | Msa1138230:intron | 40.0% |
| !! | TCCACCAATCAGGTTGAATT+GGG | + | chr7_4:7612144-7612163 | Msa1138230:intron | 40.0% |
| AACCAACTACTGTTCAACTG+GGG | - | chr7_4:7612185-7612204 | None:intergenic | 40.0% | |
| GAACCAACTACTGTTCAACT+GGG | - | chr7_4:7612186-7612205 | None:intergenic | 40.0% | |
| TGAACCAACTACTGTTCAAC+TGG | - | chr7_4:7612187-7612206 | None:intergenic | 40.0% | |
| AATCAGACTAGAGATCGAAC+CGG | - | chr7_4:7612328-7612347 | None:intergenic | 40.0% | |
| TCACTCCAAATTCCTAGACA+TGG | + | chr7_4:7612437-7612456 | Msa1138230:CDS | 40.0% | |
| TCCAAATTCCTAGACATGGT+AGG | + | chr7_4:7612441-7612460 | Msa1138230:CDS | 40.0% | |
| CCAAATTCCTAGACATGGTA+GGG | + | chr7_4:7612442-7612461 | Msa1138230:CDS | 40.0% | |
| TATGTAACCCTACCATGTCT+AGG | - | chr7_4:7612452-7612471 | None:intergenic | 40.0% | |
| GCATGTGAAGACCAACTATA+AGG | + | chr7_4:7612539-7612558 | Msa1138230:CDS | 40.0% | |
| ! | ATGGATTGATAGGCAAGCAA+AGG | - | chr7_4:7612690-7612709 | None:intergenic | 40.0% |
| AAACACTTACGAGACTGTTC+AGG | - | chr7_4:7612888-7612907 | None:intergenic | 40.0% | |
| GATGACACTGGTATGTTCTA+TGG | + | chr7_4:7613067-7613086 | Msa1138230:intron | 40.0% | |
| ! | AATGATCTGTTGATGGAAGC+TGG | + | chr7_4:7613103-7613122 | Msa1138230:CDS | 40.0% |
| GAAACATTCACACTCAACCA+AGG | + | chr7_4:7613172-7613191 | Msa1138230:CDS | 40.0% | |
| ATTCACACTCAACCAAGGAT+GGG | + | chr7_4:7613177-7613196 | Msa1138230:CDS | 40.0% | |
| CCATTGAAGTAGACTCTTCT+AGG | - | chr7_4:7613208-7613227 | None:intergenic | 40.0% | |
| CCTAGAAGAGTCTACTTCAA+TGG | + | chr7_4:7613205-7613224 | Msa1138230:CDS | 40.0% | |
| GTGAAGAATTAGGGAGGTAA+GGG | - | chr7_4:7613264-7613283 | None:intergenic | 40.0% | |
| ! | AAGCCAAGTATTGTCATCCT+CGG | + | chr7_4:7613391-7613410 | Msa1138230:three_prime_UTR | 40.0% |
| ATTCCGAGGATGACAATACT+TGG | - | chr7_4:7613397-7613416 | None:intergenic | 40.0% | |
| TGCAATATTTACGGTTGGGC+GGG | + | chr7_4:7610425-7610444 | Msa1138230:intron | 45.0% | |
| ! | GTACCGGCACATAATGAATC+CGG | + | chr7_4:7610684-7610703 | Msa1138230:CDS | 45.0% |
| TACCGGCACATAATGAATCC+GGG | + | chr7_4:7610685-7610704 | Msa1138230:CDS | 45.0% | |
| ATCCCGGATTCATTATGTGC+CGG | - | chr7_4:7610690-7610709 | None:intergenic | 45.0% | |
| ATGAATCCGGGATGGACATT+AGG | + | chr7_4:7610697-7610716 | Msa1138230:CDS | 45.0% | |
| GATGGACATTAGGATGGTCA+TGG | + | chr7_4:7610707-7610726 | Msa1138230:CDS | 45.0% | |
| GGATCTCAAACAACTGAGCA+AGG | + | chr7_4:7610760-7610779 | Msa1138230:CDS | 45.0% | |
| TTCTCGAACTGCTGTAAAGG+TGG | + | chr7_4:7610877-7610896 | Msa1138230:CDS | 45.0% | |
| CAGCTTGTCCAACACTAACT+TGG | - | chr7_4:7610951-7610970 | None:intergenic | 45.0% | |
| ! | CAAGTTAGTGTTGGACAAGC+TGG | + | chr7_4:7610949-7610968 | Msa1138230:CDS | 45.0% |
| AATTTCACTCTCTTGGCTCC+TGG | + | chr7_4:7611003-7611022 | Msa1138230:CDS | 45.0% | |
| GTGGAAGGAACAATCTTAGC+AGG | - | chr7_4:7611048-7611067 | None:intergenic | 45.0% | |
| TTCCACTACTTTCCTCACCA+CGG | + | chr7_4:7611062-7611081 | Msa1138230:CDS | 45.0% | |
| GGGTAACACTGTACACATAG+AGG | + | chr7_4:7611326-7611345 | Msa1138230:intron | 45.0% | |
| GTTCAATCGGTTGAACCAGT+TGG | - | chr7_4:7611739-7611758 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAACCGATTGAAC+CGG | + | chr7_4:7611739-7611758 | Msa1138230:intron | 45.0% |
| ACCACAATTCGGTTGAACCA+AGG | + | chr7_4:7611800-7611819 | Msa1138230:intron | 45.0% | |
| ACCTTGGTTCAACCGAATTG+TGG | - | chr7_4:7611804-7611823 | None:intergenic | 45.0% | |
| CCGTTCACTTGATTCAACCT+TGG | - | chr7_4:7611820-7611839 | None:intergenic | 45.0% | |
| !! | TGTTGGCCTTACTCTTAGTC+TGG | + | chr7_4:7611984-7612003 | Msa1138230:intron | 45.0% |
| TCGAACCAAACCAGTTCAAC+TGG | + | chr7_4:7612077-7612096 | Msa1138230:intron | 45.0% | |
| CTCGATTCAACCAGTTGAAC+TGG | - | chr7_4:7612090-7612109 | None:intergenic | 45.0% | |
| TAATCCCGATTCCACCAATC+AGG | + | chr7_4:7612134-7612153 | Msa1138230:intron | 45.0% | |
| TCAACCTGATTGGTGGAATC+GGG | - | chr7_4:7612141-7612160 | None:intergenic | 45.0% | |
| !! | CCACCAATCAGGTTGAATTG+GGG | + | chr7_4:7612145-7612164 | Msa1138230:intron | 45.0% |
| CAACCCCAATTCAACCTGAT+TGG | - | chr7_4:7612151-7612170 | None:intergenic | 45.0% | |
| AACCCCAGTTGAACAGTAGT+TGG | + | chr7_4:7612180-7612199 | Msa1138230:intron | 45.0% | |
| CCCTACCATGTCTAGGAATT+TGG | - | chr7_4:7612445-7612464 | None:intergenic | 45.0% | |
| CCTAATGGGGCACATATGAT+GGG | - | chr7_4:7612511-7612530 | None:intergenic | 45.0% | |
| CCATCATATGTGCCCCATTA+GGG | + | chr7_4:7612509-7612528 | Msa1138230:CDS | 45.0% | |
| ACATGCCAGTGTACCCTAAT+GGG | - | chr7_4:7612525-7612544 | None:intergenic | 45.0% | |
| CATTCACACTCAACCAAGGA+TGG | + | chr7_4:7613176-7613195 | Msa1138230:CDS | 45.0% | |
| ! | TTCTAGGAAATGCCCATCCT+TGG | - | chr7_4:7613192-7613211 | None:intergenic | 45.0% |
| TAAGGGTAGGTATCAGGTGA+AGG | - | chr7_4:7613247-7613266 | None:intergenic | 45.0% | |
| AGAATTAGGGAGGTAAGGGT+AGG | - | chr7_4:7613260-7613279 | None:intergenic | 45.0% | |
| GGTGAAGAATTAGGGAGGTA+AGG | - | chr7_4:7613265-7613284 | None:intergenic | 45.0% | |
| TCACAGGTGAAGAATTAGGG+AGG | - | chr7_4:7613270-7613289 | None:intergenic | 45.0% | |
| TGGAAGTTGAGGACATTCAC+AGG | - | chr7_4:7613286-7613305 | None:intergenic | 45.0% | |
| ! | TGGTTCTCTTGCTAGCTCTT+TGG | + | chr7_4:7613323-7613342 | Msa1138230:CDS | 45.0% |
| TGTCTTCATACCTGTGGTTG+CGG | - | chr7_4:7613420-7613439 | None:intergenic | 45.0% | |
| !!! | ACTTAATTTTAAAAATTATT+AGG | - | chr7_4:7611849-7611868 | None:intergenic | 5.0% |
| !!! | TAATAATTTTTAAAATTAAG+TGG | + | chr7_4:7611848-7611867 | Msa1138230:intron | 5.0% |
| !!! | AATAATTTTTAAAATTAAGT+GGG | + | chr7_4:7611849-7611868 | Msa1138230:intron | 5.0% |
| !!! | AATGAAAATTAATTTTTTAT+TGG | + | chr7_4:7611941-7611960 | Msa1138230:intron | 5.0% |
| !!! | ATGAAAATTAATTTTTTATT+GGG | + | chr7_4:7611942-7611961 | Msa1138230:intron | 5.0% |
| GTTGTGTCTTGGACAGCAGA+TGG | + | chr7_4:7610150-7610169 | Msa1138230:CDS | 50.0% | |
| TTGGACAGCAGATGGCTATG+TGG | + | chr7_4:7610158-7610177 | Msa1138230:CDS | 50.0% | |
| GCAATATTTACGGTTGGGCG+GGG | + | chr7_4:7610426-7610445 | Msa1138230:intron | 50.0% | |
| GGCACATAATGAATCCGGGA+TGG | + | chr7_4:7610689-7610708 | Msa1138230:CDS | 50.0% | |
| ATCCGGGATGGACATTAGGA+TGG | + | chr7_4:7610701-7610720 | Msa1138230:CDS | 50.0% | |
| GACCATCCTAATGTCCATCC+CGG | - | chr7_4:7610706-7610725 | None:intergenic | 50.0% | |
| GGGAGAAGGTCTACAACTGT+TGG | - | chr7_4:7610835-7610854 | None:intergenic | 50.0% | |
| ACAGTTGTAGACCTTCTCCC+TGG | + | chr7_4:7610835-7610854 | Msa1138230:CDS | 50.0% | |
| TGTAAGGTACACCAGGGAGA+AGG | - | chr7_4:7610849-7610868 | None:intergenic | 50.0% | |
| AAGGTGGAGTTGTAGCAGCA+TGG | + | chr7_4:7610893-7610912 | Msa1138230:CDS | 50.0% | |
| AGGTGGAGTTGTAGCAGCAT+GGG | + | chr7_4:7610894-7610913 | Msa1138230:CDS | 50.0% | |
| CAGGACCACAAGTATAGCCA+GGG | - | chr7_4:7611029-7611048 | None:intergenic | 50.0% | |
| ! | GTGGTGAGGAAAGTAGTGGA+AGG | - | chr7_4:7611063-7611082 | None:intergenic | 50.0% |
| ATCCGTGGTGAGGAAAGTAG+TGG | - | chr7_4:7611067-7611086 | None:intergenic | 50.0% | |
| TTGAATCAAGTGAACGGGGC+CGG | + | chr7_4:7611823-7611842 | Msa1138230:intron | 50.0% | |
| TCAGGGCCAGACTAAGAGTA+AGG | - | chr7_4:7611993-7612012 | None:intergenic | 50.0% | |
| TACTCTTAGTCTGGCCCTGA+CGG | + | chr7_4:7611993-7612012 | Msa1138230:intron | 50.0% | |
| AGATCATGCTCAACCCGTCA+GGG | - | chr7_4:7612010-7612029 | None:intergenic | 50.0% | |
| AAGATCATGCTCAACCCGTC+AGG | - | chr7_4:7612011-7612030 | None:intergenic | 50.0% | |
| CCCCAATTCAACCTGATTGG+TGG | - | chr7_4:7612148-7612167 | None:intergenic | 50.0% | |
| CCCATCATATGTGCCCCATT+AGG | + | chr7_4:7612508-7612527 | Msa1138230:CDS | 50.0% | |
| CCCTAATGGGGCACATATGA+TGG | - | chr7_4:7612512-7612531 | None:intergenic | 50.0% | |
| CATGCCAGTGTACCCTAATG+GGG | - | chr7_4:7612524-7612543 | None:intergenic | 50.0% | |
| CACATGCCAGTGTACCCTAA+TGG | - | chr7_4:7612526-7612545 | None:intergenic | 50.0% | |
| TTGATGGAAGCTGGACCAAG+TGG | + | chr7_4:7613112-7613131 | Msa1138230:CDS | 50.0% | |
| CCTCAGTGTCTTCATACCTG+TGG | - | chr7_4:7613426-7613445 | None:intergenic | 50.0% | |
| CCACAGGTATGAAGACACTG+AGG | + | chr7_4:7613423-7613442 | Msa1138230:three_prime_UTR | 50.0% | |
| TGCTCATTGTTACCGCTGCC+TGG | - | chr7_4:7610654-7610673 | None:intergenic | 55.0% | |
| GGTGGAGTTGTAGCAGCATG+GGG | + | chr7_4:7610895-7610914 | Msa1138230:CDS | 55.0% | |
| GCAGGACCACAAGTATAGCC+AGG | - | chr7_4:7611030-7611049 | None:intergenic | 55.0% | |
| ! | GGAACTTAACGGGCCTACGT+AGG | + | chr7_4:7611347-7611366 | Msa1138230:intron | 55.0% |
| CCACAGGCACAAGAAGGACA+AGG | - | chr7_4:7611618-7611637 | None:intergenic | 55.0% | |
| CCTTGTCCTTCTTGTGCCTG+TGG | + | chr7_4:7611615-7611634 | Msa1138230:CDS | 55.0% | |
| CTTCTTGTTCTGGCAGCCAC+AGG | - | chr7_4:7611634-7611653 | None:intergenic | 55.0% | |
| TTATTGGGGGGCCTAAAGCG+AGG | + | chr7_4:7611957-7611976 | Msa1138230:intron | 55.0% | |
| TATTGGGGGGCCTAAAGCGA+GGG | + | chr7_4:7611958-7611977 | Msa1138230:intron | 55.0% | |
| ! | GCCTAAAGCGAGGGCTTTGT+TGG | + | chr7_4:7611967-7611986 | Msa1138230:intron | 55.0% |
| GCCAACAAAGCCCTCGCTTT+AGG | - | chr7_4:7611971-7611990 | None:intergenic | 55.0% | |
| ACTCTTAGTCTGGCCCTGAC+GGG | + | chr7_4:7611994-7612013 | Msa1138230:intron | 55.0% | |
| ! | TGATGGGTGCACTGCAGCAA+TGG | - | chr7_4:7612495-7612514 | None:intergenic | 55.0% |
| TGTGCCCCATTAGGGTACAC+TGG | + | chr7_4:7612517-7612536 | Msa1138230:CDS | 55.0% | |
| GGGAGGTAAGGGTAGGTATC+AGG | - | chr7_4:7613253-7613272 | None:intergenic | 55.0% | |
| CCACAAGTATAGCCAGGGCC+AGG | - | chr7_4:7611024-7611043 | None:intergenic | 60.0% | |
| CCTGGCCCTGGCTATACTTG+TGG | + | chr7_4:7611021-7611040 | Msa1138230:CDS | 60.0% | |
| AGTCTTGCGGCGCTTATCCG+TGG | - | chr7_4:7611082-7611101 | None:intergenic | 60.0% | |
| TGGCAGCCACAGGCACAAGA+AGG | - | chr7_4:7611624-7611643 | None:intergenic | 60.0% | |
| TCCTCGGAATCCGCAACCAC+AGG | + | chr7_4:7613407-7613426 | Msa1138230:three_prime_UTR | 60.0% | |
| ACCTGTGGTTGCGGATTCCG+AGG | - | chr7_4:7613411-7613430 | None:intergenic | 60.0% | |
| ACTCTCTTGGCTCCTGGCCC+TGG | + | chr7_4:7611009-7611028 | Msa1138230:CDS | 65.0% | |
| TGCGGCGCTTATCCGTGGTG+AGG | - | chr7_4:7611077-7611096 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 7609786 | 7613715 | 7609786 | ID=Msa1138230;Name=Msa1138230 |
| chr7_4 | mRNA | 7609786 | 7613715 | 7609786 | ID=Msa1138230-mRNA-1;Parent=Msa1138230;Name=Msa1138230-mRNA-1;_AED=0.03;_eAED=0.03;_QI=171|1|1|1|1|1|6|367|431 |
| chr7_4 | exon | 7609786 | 7610008 | 7609786 | ID=Msa1138230-mRNA-1:exon:2091;Parent=Msa1138230-mRNA-1 |
| chr7_4 | exon | 7610100 | 7610179 | 7610100 | ID=Msa1138230-mRNA-1:exon:2092;Parent=Msa1138230-mRNA-1 |
| chr7_4 | exon | 7610655 | 7611111 | 7610655 | ID=Msa1138230-mRNA-1:exon:2093;Parent=Msa1138230-mRNA-1 |
| chr7_4 | exon | 7611517 | 7611664 | 7611517 | ID=Msa1138230-mRNA-1:exon:2094;Parent=Msa1138230-mRNA-1 |
| chr7_4 | exon | 7612434 | 7612711 | 7612434 | ID=Msa1138230-mRNA-1:exon:2095;Parent=Msa1138230-mRNA-1 |
| chr7_4 | exon | 7613068 | 7613715 | 7613068 | ID=Msa1138230-mRNA-1:exon:2096;Parent=Msa1138230-mRNA-1 |
| chr7_4 | five_prime_UTR | 7609786 | 7609956 | 7609786 | ID=Msa1138230-mRNA-1:five_prime_utr;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7609957 | 7610008 | 7609957 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7610100 | 7610179 | 7610100 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7610655 | 7611111 | 7610655 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7611517 | 7611664 | 7611517 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7612434 | 7612711 | 7612434 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | CDS | 7613068 | 7613348 | 7613068 | ID=Msa1138230-mRNA-1:cds;Parent=Msa1138230-mRNA-1 |
| chr7_4 | three_prime_UTR | 7613349 | 7613715 | 7613349 | ID=Msa1138230-mRNA-1:three_prime_utr;Parent=Msa1138230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
