AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0089830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089830 MtrunA17_Chr1g0209041 99.160 357 3 0 1 357 1 357 0.0 738
Msa0089830 MtrunA17_Chr5g0442111 82.432 74 4 1 272 345 24 88 2.09e-39 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0089830 AT1G68200.1 49.020 306 109 8 62 352 29 302 5.93e-85 260
Msa0089830 AT1G68200.5 49.020 306 109 8 62 352 29 302 5.93e-85 260
Msa0089830 AT1G68200.2 48.693 306 109 8 62 352 29 301 2.10e-83 256
Msa0089830 AT1G68200.6 48.693 306 109 8 62 352 29 301 2.10e-83 256
Msa0089830 AT1G66810.1 61.644 146 47 1 200 345 168 304 2.41e-55 184
Msa0089830 AT1G66810.3 61.644 146 47 1 200 345 168 304 2.41e-55 184
Msa0089830 AT1G68200.4 41.026 156 72 5 62 217 29 164 4.70e-22 92.8
Msa0089830 AT1G68200.3 41.026 156 72 5 62 217 29 164 4.70e-22 92.8

Find 131 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGCAGGATGGTCCTTGC+TGG 0.159266 1_2:+71565189 Msa0089830:CDS
CTGCAGAGCTTCAACTTCTT+TGG 0.179049 1_2:-71562651 None:intergenic
TCTTTCCAGCTTCATTGATC+TGG 0.216499 1_2:-71565292 None:intergenic
AATTCAAAGTGTCAAACTTA+TGG 0.217105 1_2:-71565553 None:intergenic
ATTGCTAACTTTGCAGAGTA+TGG 0.254484 1_2:-71565685 None:intergenic
GCCGCCGTTGCTGCTGTTTC+CGG 0.266911 1_2:-71562510 None:intergenic
GCCGATGCCGTAACCGCTTT+TGG 0.267264 1_2:-71562399 None:intergenic
CAACTTCTTTGGAACTTTCC+AGG 0.279329 1_2:-71562640 None:intergenic
TAGCGTGGGTGGCGGATCAC+TGG 0.295264 1_2:-71565156 None:intergenic
GATCTAACAGAAATGCTCTT+TGG 0.302932 1_2:-71562980 None:intergenic
GCGGGAGCGAGTAGCGCTTT+TGG 0.327959 1_2:-71563065 None:intergenic
ATTCAAAGTGTCAAACTTAT+GGG 0.343284 1_2:-71565552 None:intergenic
GTCAATTCGCTCATGGCATT+GGG 0.349776 1_2:+71565124 Msa0089830:CDS
GGTTTCCGTGGCTTGAATCT+TGG 0.355570 1_2:+71562815 Msa0089830:CDS
CTTTCCAGCTTCATTGATCT+GGG 0.356760 1_2:-71565291 None:intergenic
TCCCTTTGGTTCGTTATGTT+GGG 0.356995 1_2:-71565609 None:intergenic
TTCCCTTTGGTTCGTTATGT+TGG 0.360686 1_2:-71565610 None:intergenic
CATGACGGAAATGGCATCTA+TGG 0.367595 1_2:-71565230 None:intergenic
TTCATAGAGTACCTTCCCTT+TGG 0.372233 1_2:-71565623 None:intergenic
CTTTATCCTTACTCTGACCT+TGG 0.377357 1_2:+71562542 Msa0089830:CDS
AATTACAACAATTTACAAAC+AGG 0.378341 1_2:+71565388 Msa0089830:three_prime_UTR
GAAACTGGCACATGCCCTTA+TGG 0.383739 1_2:+71565093 Msa0089830:CDS
TAATAATAACAAGGAGTTGC+AGG 0.387088 1_2:+71562883 Msa0089830:CDS
CCGTCATCCAAAAGCGGTTA+CGG 0.390482 1_2:+71562392 Msa0089830:CDS
GATACAGAAGCATCAGGATA+TGG 0.396830 1_2:+71562586 Msa0089830:CDS
CTGTTTCCGGCCAGCGATGA+TGG 0.399083 1_2:-71562497 None:intergenic
TGTAACAAATGGCAGGAAAC+TGG 0.399409 1_2:+71565078 Msa0089830:CDS
TCTGCAGGATGGTCCTTGCT+GGG 0.402584 1_2:+71565190 Msa0089830:CDS
CTTCTGCAACTCTTTGTTCA+CGG 0.410248 1_2:-71562696 None:intergenic
ACATACAAATACGTCTATAT+TGG 0.413990 1_2:+71565585 Msa0089830:three_prime_UTR
CAGTAAGTGCATGACGGAAA+TGG 0.414882 1_2:-71565239 None:intergenic
CCTTCTCGTTCAAGCTTCGC+TGG 0.421155 1_2:+71562727 Msa0089830:CDS
TGCATCTTCTTCTTCTTCAT+CGG 0.433132 1_2:+71562066 Msa0089830:five_prime_UTR
TATGTTTCTCAGTCGTCTCC+TGG 0.438714 1_2:+71562622 Msa0089830:CDS
TGTCAATTCGCTCATGGCAT+TGG 0.444853 1_2:+71565123 Msa0089830:CDS
AATTTAGAAAGAGAATGTTA+TGG 0.455593 1_2:-71561947 None:intergenic
CAAACGGAGTAGATTGAGTC+TGG 0.467277 1_2:-71562781 None:intergenic
CTTGAAGCTTGCTCCGCCTC+CGG 0.468503 1_2:+71563012 Msa0089830:CDS
AATTGACAGTGGTCTCCATA+AGG 0.472418 1_2:-71565108 None:intergenic
CGTGGCTTGAATCTTGGAGA+TGG 0.475661 1_2:+71562821 Msa0089830:CDS
GAAAGGAAAACTGTGCTGAT+TGG 0.476246 1_2:+71562843 Msa0089830:CDS
GGCGTTCGACTGCATGTGAC+CGG 0.476954 1_2:-71562432 None:intergenic
CGAGAAGCTTCTGCTTGTGA+AGG 0.483077 1_2:+71561997 Msa0089830:five_prime_UTR
AGCATTTCTGTTAGATCCAA+TGG 0.486635 1_2:+71562986 Msa0089830:CDS
TCCAAAAGCGGTTACGGCAT+CGG 0.490846 1_2:+71562398 Msa0089830:CDS
CGTCGGACTCTCATCAGATT+CGG 0.492348 1_2:-71562912 None:intergenic
GAAGCTCTGCAGCAGGAAAA+CGG 0.500754 1_2:+71562662 Msa0089830:CDS
AAACCTTGCAACACATCAAA+CGG 0.507246 1_2:-71562797 None:intergenic
TGAGAATAACGGTGTTGAAA+CGG 0.507485 1_2:+71562943 Msa0089830:CDS
AGCGTGGGTGGCGGATCACT+GGG 0.510898 1_2:-71565155 None:intergenic
AAATGGCATCTATGGCCATA+CGG 0.511220 1_2:-71565222 None:intergenic
GCTGGGGTTGTGTGCCCGTA+TGG 0.512898 1_2:+71565207 Msa0089830:CDS
GCCGGAAACAGCAGCAACGG+CGG 0.517791 1_2:+71562509 Msa0089830:CDS
ATGCGTGATACAGAAGCATC+AGG 0.518868 1_2:+71562580 Msa0089830:CDS
TCGCTGGAGAACCGATTCAA+TGG 0.519751 1_2:+71562743 Msa0089830:CDS
ATTCTTGAGGAGAATGTGTA+TGG 0.519892 1_2:+71565505 Msa0089830:three_prime_UTR
GGAAACAGCAGCAACGGCGG+CGG 0.524773 1_2:+71562512 Msa0089830:CDS
GCTACAAAACTGAGGTCTGC+AGG 0.527724 1_2:+71565175 Msa0089830:CDS
TTAGTTACGACGGCCGGAGG+CGG 0.529646 1_2:-71563025 None:intergenic
AGAAGTTGAAGCTCTGCAGC+AGG 0.529958 1_2:+71562655 Msa0089830:CDS
ATTGACAGTGGTCTCCATAA+GGG 0.530052 1_2:-71565107 None:intergenic
TAAGCCCAGATCAATGAAGC+TGG 0.530814 1_2:+71565287 Msa0089830:CDS
AGCAAGCTTCAAGTAGCCAT+TGG 0.531440 1_2:-71563002 None:intergenic
AGACTGAGCTCTGTAACAAA+TGG 0.531908 1_2:+71565067 Msa0089830:CDS
AATGGCATCTATGGCCATAC+GGG 0.531942 1_2:-71565221 None:intergenic
AGGATCCGCCACCATTGAAT+CGG 0.534519 1_2:-71562754 None:intergenic
GGAACGCTTGCAGCAAATTG+AGG 0.538123 1_2:+71565471 Msa0089830:three_prime_UTR
GCTCAGTCTTGAACATCCCC+TGG 0.541107 1_2:-71565053 None:intergenic
GAAGCTTCTGCTTGTGAAGG+TGG 0.541524 1_2:+71562000 Msa0089830:five_prime_UTR
AATGAAGCTGGAAAGATGAA+TGG 0.545232 1_2:+71565299 Msa0089830:exon
ACTCCGTTTGATGTGTTGCA+AGG 0.545981 1_2:+71562794 Msa0089830:CDS
TCTGTTCCAAGGTCAGAGTA+AGG 0.546191 1_2:-71562548 None:intergenic
CTGGCCGGAAACAGCAGCAA+CGG 0.547701 1_2:+71562506 Msa0089830:CDS
CGAATTTGATCGTAACAGAA+AGG 0.555671 1_2:-71562043 None:intergenic
TTGTAATATGATGTTTCTAG+TGG 0.555975 1_2:+71565720 Msa0089830:three_prime_UTR
TAATGATCTTCCATCATCGC+TGG 0.563534 1_2:+71562487 Msa0089830:CDS
TGAGCTCTGTAACAAATGGC+AGG 0.566245 1_2:+71565071 Msa0089830:CDS
AGCAAATTGAGGTCTATAGC+AGG 0.566632 1_2:+71565482 Msa0089830:three_prime_UTR
AGCATTGTTGTTAGTTACGA+CGG 0.567553 1_2:-71563035 None:intergenic
CATCTCCAAGATTCAAGCCA+CGG 0.567612 1_2:-71562820 None:intergenic
TGTGCGAGGAGGGCAGAAAG+AGG 0.570699 1_2:+71565002 Msa0089830:CDS
GACCACTGTCAATTCGCTCA+TGG 0.571725 1_2:+71565117 Msa0089830:CDS
TTCAAAGTGTCAAACTTATG+GGG 0.572051 1_2:-71565551 None:intergenic
CTGCAGGATGGTCCTTGCTG+GGG 0.572424 1_2:+71565191 Msa0089830:CDS
AGAGGAAGAGCCTCTTGAGA+TGG 0.573431 1_2:+71565020 Msa0089830:CDS
AAAAGGTATTTGTGCGAGGA+GGG 0.574881 1_2:+71564992 Msa0089830:CDS
GATCTTCCATCATCGCTGGC+CGG 0.577149 1_2:+71562491 Msa0089830:CDS
GAGAACCGATTCAATGGTGG+CGG 0.578241 1_2:+71562749 Msa0089830:CDS
CCAGCGAAGCTTGAACGAGA+AGG 0.578885 1_2:-71562727 None:intergenic
TACAACTGTATCAGATTGAG+TGG 0.578967 1_2:-71563095 None:intergenic
TGAGATGGTTGTGTACAACC+AGG 0.582022 1_2:+71565035 Msa0089830:CDS
CTTGAATCTTGGAGATGGAA+AGG 0.582921 1_2:+71562826 Msa0089830:CDS
CAGATTGAGTGGAGGAAGCG+CGG 0.588323 1_2:-71563084 None:intergenic
TGGAAAGATGAATGGTCTCA+TGG 0.589960 1_2:+71565307 Msa0089830:exon
GGTCTATAGCAGGATTCTTG+AGG 0.591010 1_2:+71565492 Msa0089830:three_prime_UTR
GTCCCAACATAACGAACCAA+AGG 0.592529 1_2:+71565607 Msa0089830:three_prime_UTR
CGGAGTAGATTGAGTCTGGA+CGG 0.593339 1_2:-71562777 None:intergenic
TCCCAACATAACGAACCAAA+GGG 0.594883 1_2:+71565608 Msa0089830:three_prime_UTR
GCAACTCTTTGTTCACGGCA+CGG 0.595404 1_2:-71562691 None:intergenic
AGATTGAGTGGAGGAAGCGC+GGG 0.600576 1_2:-71563083 None:intergenic
CAAAAGGTATTTGTGCGAGG+AGG 0.603500 1_2:+71564991 Msa0089830:CDS
TTGTTGTTAGTTACGACGGC+CGG 0.605294 1_2:-71563031 None:intergenic
GATGTGTTGCAAGGTTTCCG+TGG 0.607851 1_2:+71562803 Msa0089830:CDS
GGTCACATGCAGTCGAACGC+CGG 0.607925 1_2:+71562434 Msa0089830:CDS
CTTGTTCAGTAAGTGCATGA+CGG 0.608476 1_2:-71565245 None:intergenic
CAAAACTGAGGTCTGCAGGA+TGG 0.616724 1_2:+71565179 Msa0089830:CDS
ACGAGTGTGATTGAGAATAA+CGG 0.622937 1_2:+71562932 Msa0089830:CDS
ATGAGTCGTACTCTGTTCCA+AGG 0.623681 1_2:-71562559 None:intergenic
ACGGGCACACAACCCCAGCA+AGG 0.626804 1_2:-71565203 None:intergenic
CTGGAGAACCGATTCAATGG+TGG 0.634958 1_2:+71562746 Msa0089830:CDS
TGTTCTCCGTCATCCAAAAG+CGG 0.637659 1_2:+71562386 Msa0089830:CDS
TCAAAGTGTCAAACTTATGG+GGG 0.638301 1_2:-71565550 None:intergenic
GAGATGGTTGTGTACAACCA+GGG 0.638365 1_2:+71565036 Msa0089830:CDS
TTGTTAGTTACGACGGCCGG+AGG 0.641381 1_2:-71563028 None:intergenic
CAGCAAAAGGTATTTGTGCG+AGG 0.645044 1_2:+71564988 Msa0089830:intron
GGCATCGGCGTCAACAACGC+CGG 0.645707 1_2:+71562413 Msa0089830:CDS
TCAATTCGCTCATGGCATTG+GGG 0.646224 1_2:+71565125 Msa0089830:CDS
TTGTACACAACCATCTCAAG+AGG 0.647753 1_2:-71565030 None:intergenic
ATTACAACAATTTACAAACA+GGG 0.648532 1_2:+71565389 Msa0089830:three_prime_UTR
AACATAACGAACCAAAGGGA+AGG 0.651792 1_2:+71565612 Msa0089830:three_prime_UTR
ACCGATCAAAATGCATAACA+AGG 0.654571 1_2:+71562358 Msa0089830:exon
AACTGTATCAGATTGAGTGG+AGG 0.659126 1_2:-71563092 None:intergenic
TAACATCAATAATAATAACA+AGG 0.675567 1_2:+71562874 Msa0089830:CDS
TGCCATGAGCGAATTGACAG+TGG 0.682669 1_2:-71565119 None:intergenic
TTATTCTCAATCACACTCGT+CGG 0.688787 1_2:-71562929 None:intergenic
AGTAGATTGAGTCTGGACGG+AGG 0.698278 1_2:-71562774 None:intergenic
ATAACGGTGTTGAAACGGAG+AGG 0.717587 1_2:+71562948 Msa0089830:CDS
CCACCCACGCTACAAAACTG+AGG 0.721664 1_2:+71565167 Msa0089830:CDS
TTGACTCAAAGCATATACAA+CGG 0.726287 1_2:+71565340 Msa0089830:three_prime_UTR
AGATGGTTGTGTACAACCAG+GGG 0.741581 1_2:+71565037 Msa0089830:CDS
GTACAACGAAGCAAACACGC+CGG 0.782658 1_2:-71562453 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTATGTTGAAAATA+AGG + chr1_2:71564645-71564664 Msa0089830:intron 10.0%
!! TAACATCAATAATAATAACA+AGG + chr1_2:71562874-71562893 Msa0089830:CDS 15.0%
!! ATTATAATGTAAAAACTGTA+TGG - chr1_2:71564117-71564136 None:intergenic 15.0%
!!! CAGTTTTTACATTATAATTA+AGG + chr1_2:71564119-71564138 Msa0089830:intron 15.0%
!!! TTTTTACATTATAATTAAGG+TGG + chr1_2:71564122-71564141 Msa0089830:intron 15.0%
!! TAACAAAACAAATAACTAAA+TGG - chr1_2:71564527-71564546 None:intergenic 15.0%
!! AGCATATATATTAATAATAG+AGG - chr1_2:71564622-71564641 None:intergenic 15.0%
!! AAAGTAATACCAAAAAAAAA+AGG + chr1_2:71565450-71565469 Msa0089830:three_prime_UTR 15.0%
!!! TATGAAATAATACCATTTTT+TGG + chr1_2:71565640-71565659 Msa0089830:three_prime_UTR 15.0%
!!! TTTCTATACTTATTCTTTTA+AGG + chr1_2:71565756-71565775 Msa0089830:three_prime_UTR 15.0%
!!! CAAGTAAACTTTTTTTTTTT+TGG + chr1_2:71565813-71565832 Msa0089830:three_prime_UTR 15.0%
!! AATTTAGAAAGAGAATGTTA+TGG - chr1_2:71561950-71561969 None:intergenic 20.0%
!!! GTTTGTATATTTTCTTGAAT+CGG + chr1_2:71562154-71562173 Msa0089830:intron 20.0%
!!! CGATATTTTAAACTAATAGA+TGG + chr1_2:71563856-71563875 Msa0089830:intron 20.0%
!!! GCATCAAAATTTAACTTAAT+TGG - chr1_2:71564092-71564111 None:intergenic 20.0%
!!! TTTAAAACTTAGAAAAACCA+AGG - chr1_2:71564362-71564381 None:intergenic 20.0%
!!! TTGGTTTTTCTAAGTTTTAA+AGG + chr1_2:71564361-71564380 Msa0089830:intron 20.0%
!!! TGGTTTTTCTAAGTTTTAAA+GGG + chr1_2:71564362-71564381 Msa0089830:intron 20.0%
!!! AATTGTGTTCAATTTTGAAA+TGG + chr1_2:71564703-71564722 Msa0089830:intron 20.0%
!! TAGATTTGATTGTTGATATT+CGG + chr1_2:71564926-71564945 Msa0089830:intron 20.0%
!! AATTACAACAATTTACAAAC+AGG + chr1_2:71565388-71565407 Msa0089830:three_prime_UTR 20.0%
!! ATTACAACAATTTACAAACA+GGG + chr1_2:71565389-71565408 Msa0089830:three_prime_UTR 20.0%
!!! TTTTTGGTATTACTTTCTAA+TGG - chr1_2:71565446-71565465 None:intergenic 20.0%
!! ATTACAAAACTACCAAAAAA+TGG - chr1_2:71565655-71565674 None:intergenic 20.0%
!! TATATTTTCTTGAATCGGTT+AGG + chr1_2:71562159-71562178 Msa0089830:intron 25.0%
!! CTATGAATTTTTGTTAATCG+AGG + chr1_2:71562285-71562304 Msa0089830:intron 25.0%
!!! ATGAGATAAAGATTTTAGAG+AGG + chr1_2:71563884-71563903 Msa0089830:intron 25.0%
!!! TAAAGATTTTAGAGAGGAAA+CGG + chr1_2:71563890-71563909 Msa0089830:intron 25.0%
! TCATACAATGTCTACATTAT+AGG + chr1_2:71564223-71564242 Msa0089830:intron 25.0%
!!! ACATTATAGGAGTATTTAAG+AGG + chr1_2:71564236-71564255 Msa0089830:intron 25.0%
!!! GGTTTTTCTAAGTTTTAAAG+GGG + chr1_2:71564363-71564382 Msa0089830:intron 25.0%
!!! TAAGTTTTAAAGGGGATAAA+TGG + chr1_2:71564371-71564390 Msa0089830:intron 25.0%
!! ATTCAAAGTGTCAAACTTAT+GGG - chr1_2:71565555-71565574 None:intergenic 25.0%
!! AATTCAAAGTGTCAAACTTA+TGG - chr1_2:71565556-71565575 None:intergenic 25.0%
! ACATACAAATACGTCTATAT+TGG + chr1_2:71565585-71565604 Msa0089830:three_prime_UTR 25.0%
!!! TTGTAATATGATGTTTCTAG+TGG + chr1_2:71565720-71565739 Msa0089830:three_prime_UTR 25.0%
!! TCCTTGTTATGCATTTTGAT+CGG - chr1_2:71562362-71562381 None:intergenic 30.0%
TAATAATAACAAGGAGTTGC+AGG + chr1_2:71562883-71562902 Msa0089830:CDS 30.0%
ACTAACAAGCAAGTCAAATT+TGG - chr1_2:71563349-71563368 None:intergenic 30.0%
! AAGGTTTTACTTCATTTGGA+AGG - chr1_2:71563385-71563404 None:intergenic 30.0%
! AAGCAAGGTTTTACTTCATT+TGG - chr1_2:71563389-71563408 None:intergenic 30.0%
GAAAAAACAACCAAACTACA+AGG - chr1_2:71563443-71563462 None:intergenic 30.0%
AACCAACAACTAGTATAAAC+TGG - chr1_2:71563503-71563522 None:intergenic 30.0%
CAGGTTAAAATGTCACAAAA+AGG - chr1_2:71563594-71563613 None:intergenic 30.0%
CTGTATATGGTTTCAAATTG+CGG + chr1_2:71563633-71563652 Msa0089830:intron 30.0%
!!! ACAACCATGGTTTTAAAATG+CGG - chr1_2:71564050-71564069 None:intergenic 30.0%
TATATAGAACTAGCAAGACT+AGG + chr1_2:71564188-71564207 Msa0089830:intron 30.0%
ACATTTATGATAGCCATGTA+TGG + chr1_2:71564298-71564317 Msa0089830:intron 30.0%
!! TTTTAAAGGGGATAAATGGT+TGG + chr1_2:71564375-71564394 Msa0089830:intron 30.0%
! TGTCACTCAATTTCTTTTCA+TGG + chr1_2:71564440-71564459 Msa0089830:intron 30.0%
GTAATGTCTTGAATCTTCAT+TGG + chr1_2:71564563-71564582 Msa0089830:intron 30.0%
TACTTCGAGATAAAGATGAA+TGG + chr1_2:71564672-71564691 Msa0089830:intron 30.0%
AAACATTAGTATGACTGTCA+AGG - chr1_2:71564758-71564777 None:intergenic 30.0%
TTACATTATTATGAGCGTCA+AGG - chr1_2:71564856-71564875 None:intergenic 30.0%
TTGACTCAAAGCATATACAA+CGG + chr1_2:71565340-71565359 Msa0089830:three_prime_UTR 30.0%
GAGAAAAAAGAAAGACATGA+GGG - chr1_2:71565531-71565550 None:intergenic 30.0%
! TTCAAAGTGTCAAACTTATG+GGG - chr1_2:71565554-71565573 None:intergenic 30.0%
CGAATTTGATCGTAACAGAA+AGG - chr1_2:71562046-71562065 None:intergenic 35.0%
TGCATCTTCTTCTTCTTCAT+CGG + chr1_2:71562066-71562085 Msa0089830:five_prime_UTR 35.0%
!!! CACGTTTTTTCATCGTTTTC+TGG + chr1_2:71562315-71562334 Msa0089830:intron 35.0%
ACCGATCAAAATGCATAACA+AGG + chr1_2:71562358-71562377 Msa0089830:exon 35.0%
AAACCTTGCAACACATCAAA+CGG - chr1_2:71562800-71562819 None:intergenic 35.0%
TTATTCTCAATCACACTCGT+CGG - chr1_2:71562932-71562951 None:intergenic 35.0%
ACGAGTGTGATTGAGAATAA+CGG + chr1_2:71562932-71562951 Msa0089830:CDS 35.0%
! TGAGAATAACGGTGTTGAAA+CGG + chr1_2:71562943-71562962 Msa0089830:CDS 35.0%
GATCTAACAGAAATGCTCTT+TGG - chr1_2:71562983-71563002 None:intergenic 35.0%
AGCATTTCTGTTAGATCCAA+TGG + chr1_2:71562986-71563005 Msa0089830:CDS 35.0%
! AGCATTGTTGTTAGTTACGA+CGG - chr1_2:71563038-71563057 None:intergenic 35.0%
TACAACTGTATCAGATTGAG+TGG - chr1_2:71563098-71563117 None:intergenic 35.0%
!! ACAAGGTTTGTTACAGCTAA+CGG - chr1_2:71563426-71563445 None:intergenic 35.0%
CTGTAACAAACCTTGTAGTT+TGG + chr1_2:71563430-71563449 Msa0089830:intron 35.0%
CTCCAGTTTATACTAGTTGT+TGG + chr1_2:71563498-71563517 Msa0089830:intron 35.0%
ATGGCAAACTAGAGCTAATT+TGG - chr1_2:71563541-71563560 None:intergenic 35.0%
AAACCATATACAGAGCACAT+TGG - chr1_2:71563626-71563645 None:intergenic 35.0%
TTATGATCACACCACAATTG+CGG - chr1_2:71563705-71563724 None:intergenic 35.0%
!! AAAATTAAGTTGACGCCACA+AGG + chr1_2:71563967-71563986 Msa0089830:intron 35.0%
CAATAGCTGCAATATTGCAA+AGG + chr1_2:71564006-71564025 Msa0089830:intron 35.0%
! GTGGTTTGAAATCAATACCT+TGG + chr1_2:71564342-71564361 Msa0089830:intron 35.0%
TTACAAGTAACAAGTGATGC+AGG + chr1_2:71564405-71564424 Msa0089830:intron 35.0%
TACAAGTAACAAGTGATGCA+GGG + chr1_2:71564406-71564425 Msa0089830:intron 35.0%
TTAGTATGACTGTCAAGGAA+TGG - chr1_2:71564753-71564772 None:intergenic 35.0%
! GTCCACTCAGTGTTATTAAT+CGG - chr1_2:71564900-71564919 None:intergenic 35.0%
TGTTACTATACTGCAGCAAA+AGG + chr1_2:71564975-71564994 Msa0089830:intron 35.0%
AATGAAGCTGGAAAGATGAA+TGG + chr1_2:71565299-71565318 Msa0089830:exon 35.0%
!!! GCAAGCGTTCCTTTTTTTTT+TGG - chr1_2:71565462-71565481 None:intergenic 35.0%
ATTCTTGAGGAGAATGTGTA+TGG + chr1_2:71565505-71565524 Msa0089830:three_prime_UTR 35.0%
GGAGAAAAAAGAAAGACATG+AGG - chr1_2:71565532-71565551 None:intergenic 35.0%
! TCAAAGTGTCAAACTTATGG+GGG - chr1_2:71565553-71565572 None:intergenic 35.0%
ATTGCTAACTTTGCAGAGTA+TGG - chr1_2:71565688-71565707 None:intergenic 35.0%
TAATGATCTTCCATCATCGC+TGG + chr1_2:71562487-71562506 Msa0089830:CDS 40.0%
CTTTATCCTTACTCTGACCT+TGG + chr1_2:71562542-71562561 Msa0089830:CDS 40.0%
!! GATACAGAAGCATCAGGATA+TGG + chr1_2:71562586-71562605 Msa0089830:CDS 40.0%
!! CAACTTCTTTGGAACTTTCC+AGG - chr1_2:71562643-71562662 None:intergenic 40.0%
CTTCTGCAACTCTTTGTTCA+CGG - chr1_2:71562699-71562718 None:intergenic 40.0%
CTTGAATCTTGGAGATGGAA+AGG + chr1_2:71562826-71562845 Msa0089830:CDS 40.0%
! GAAAGGAAAACTGTGCTGAT+TGG + chr1_2:71562843-71562862 Msa0089830:CDS 40.0%
AACTGTATCAGATTGAGTGG+AGG - chr1_2:71563095-71563114 None:intergenic 40.0%
!! CAAGGTTTGTTACAGCTAAC+GGG - chr1_2:71563425-71563444 None:intergenic 40.0%
! TTGTTGGTTAGTAGTGTTGC+AGG + chr1_2:71563514-71563533 Msa0089830:intron 40.0%
!! ATTAGCTCTAGTTTGCCATG+AGG + chr1_2:71563542-71563561 Msa0089830:intron 40.0%
AAACCATGGTTGTTTGTGCT+TGG + chr1_2:71564057-71564076 Msa0089830:intron 40.0%
GCACTGCAAATTTCCATACA+TGG - chr1_2:71564314-71564333 None:intergenic 40.0%
ATGGAAATTTGCAGTGCTGT+TGG + chr1_2:71564317-71564336 Msa0089830:intron 40.0%
ACAAGTAACAAGTGATGCAG+GGG + chr1_2:71564407-71564426 Msa0089830:intron 40.0%
!!! ATGGTTTTATCCACTGCTGT+TGG + chr1_2:71564459-71564478 Msa0089830:intron 40.0%
! TTGTTACTCACTGCTGACTA+TGG + chr1_2:71564541-71564560 Msa0089830:intron 40.0%
!! GAATCTTCATTGGTTAGCCT+TGG + chr1_2:71564573-71564592 Msa0089830:intron 40.0%
TTATTATGAGCGTCAAGGCA+TGG - chr1_2:71564851-71564870 None:intergenic 40.0%
! CACCGATTAATAACACTGAG+TGG + chr1_2:71564895-71564914 Msa0089830:intron 40.0%
!! AAAAGGTATTTGTGCGAGGA+GGG + chr1_2:71564992-71565011 Msa0089830:CDS 40.0%
TTGTACACAACCATCTCAAG+AGG - chr1_2:71565033-71565052 None:intergenic 40.0%
AGACTGAGCTCTGTAACAAA+TGG + chr1_2:71565067-71565086 Msa0089830:CDS 40.0%
TGTAACAAATGGCAGGAAAC+TGG + chr1_2:71565078-71565097 Msa0089830:CDS 40.0%
ATTGACAGTGGTCTCCATAA+GGG - chr1_2:71565110-71565129 None:intergenic 40.0%
AATTGACAGTGGTCTCCATA+AGG - chr1_2:71565111-71565130 None:intergenic 40.0%
AAATGGCATCTATGGCCATA+CGG - chr1_2:71565225-71565244 None:intergenic 40.0%
CTTGTTCAGTAAGTGCATGA+CGG - chr1_2:71565248-71565267 None:intergenic 40.0%
CTTTCCAGCTTCATTGATCT+GGG - chr1_2:71565294-71565313 None:intergenic 40.0%
TCTTTCCAGCTTCATTGATC+TGG - chr1_2:71565295-71565314 None:intergenic 40.0%
TGGAAAGATGAATGGTCTCA+TGG + chr1_2:71565307-71565326 Msa0089830:exon 40.0%
AGCAAATTGAGGTCTATAGC+AGG + chr1_2:71565482-71565501 Msa0089830:three_prime_UTR 40.0%
TCCCAACATAACGAACCAAA+GGG + chr1_2:71565608-71565627 Msa0089830:three_prime_UTR 40.0%
! TCCCTTTGGTTCGTTATGTT+GGG - chr1_2:71565612-71565631 None:intergenic 40.0%
! TTCCCTTTGGTTCGTTATGT+TGG - chr1_2:71565613-71565632 None:intergenic 40.0%
AACATAACGAACCAAAGGGA+AGG + chr1_2:71565612-71565631 Msa0089830:three_prime_UTR 40.0%
! TTCATAGAGTACCTTCCCTT+TGG - chr1_2:71565626-71565645 None:intergenic 40.0%
TGTTCTCCGTCATCCAAAAG+CGG + chr1_2:71562386-71562405 Msa0089830:CDS 45.0%
TCTGTTCCAAGGTCAGAGTA+AGG - chr1_2:71562551-71562570 None:intergenic 45.0%
ATGAGTCGTACTCTGTTCCA+AGG - chr1_2:71562562-71562581 None:intergenic 45.0%
!! ATGCGTGATACAGAAGCATC+AGG + chr1_2:71562580-71562599 Msa0089830:CDS 45.0%
TATGTTTCTCAGTCGTCTCC+TGG + chr1_2:71562622-71562641 Msa0089830:CDS 45.0%
CTGCAGAGCTTCAACTTCTT+TGG - chr1_2:71562654-71562673 None:intergenic 45.0%
CAAACGGAGTAGATTGAGTC+TGG - chr1_2:71562784-71562803 None:intergenic 45.0%
ACTCCGTTTGATGTGTTGCA+AGG + chr1_2:71562794-71562813 Msa0089830:CDS 45.0%
CATCTCCAAGATTCAAGCCA+CGG - chr1_2:71562823-71562842 None:intergenic 45.0%
! ATAACGGTGTTGAAACGGAG+AGG + chr1_2:71562948-71562967 Msa0089830:CDS 45.0%
AGCAAGCTTCAAGTAGCCAT+TGG - chr1_2:71563005-71563024 None:intergenic 45.0%
! TTGTTGTTAGTTACGACGGC+CGG - chr1_2:71563034-71563053 None:intergenic 45.0%
GGTAATGACACAGACAAGCA+AGG - chr1_2:71563404-71563423 None:intergenic 45.0%
! AGCTCATCTGTTTTGCCTCA+TGG - chr1_2:71563560-71563579 None:intergenic 45.0%
GTGCCAATGTGCTCTGTATA+TGG + chr1_2:71563620-71563639 Msa0089830:intron 45.0%
AGTGCCGTAATGAGGGAATT+GGG + chr1_2:71563747-71563766 Msa0089830:intron 45.0%
TGCACCCAATTCCCTCATTA+CGG - chr1_2:71563754-71563773 None:intergenic 45.0%
GATGTGTATTGTCGTCCTTG+TGG - chr1_2:71563985-71564004 None:intergenic 45.0%
ACACCAAGCACAAACAACCA+TGG - chr1_2:71564063-71564082 None:intergenic 45.0%
! ATTTGCAGTGCTGTTGGTAG+TGG + chr1_2:71564323-71564342 Msa0089830:intron 45.0%
AAGGGGATAAATGGTTGGAC+TGG + chr1_2:71564380-71564399 Msa0089830:intron 45.0%
CTTGGACACATCTTGTGCTT+GGG + chr1_2:71564591-71564610 Msa0089830:intron 45.0%
ATGACTGTCAAGGAATGGCA+AGG - chr1_2:71564748-71564767 None:intergenic 45.0%
!! CAGCAAAAGGTATTTGTGCG+AGG + chr1_2:71564988-71565007 Msa0089830:intron 45.0%
!! CAAAAGGTATTTGTGCGAGG+AGG + chr1_2:71564991-71565010 Msa0089830:CDS 45.0%
TGAGATGGTTGTGTACAACC+AGG + chr1_2:71565035-71565054 Msa0089830:CDS 45.0%
GAGATGGTTGTGTACAACCA+GGG + chr1_2:71565036-71565055 Msa0089830:CDS 45.0%
AGATGGTTGTGTACAACCAG+GGG + chr1_2:71565037-71565056 Msa0089830:CDS 45.0%
TGAGCTCTGTAACAAATGGC+AGG + chr1_2:71565071-71565090 Msa0089830:CDS 45.0%
TGTCAATTCGCTCATGGCAT+TGG + chr1_2:71565123-71565142 Msa0089830:CDS 45.0%
GTCAATTCGCTCATGGCATT+GGG + chr1_2:71565124-71565143 Msa0089830:CDS 45.0%
TCAATTCGCTCATGGCATTG+GGG + chr1_2:71565125-71565144 Msa0089830:CDS 45.0%
!! AGACCTCAGTTTTGTAGCGT+GGG - chr1_2:71565173-71565192 None:intergenic 45.0%
AATGGCATCTATGGCCATAC+GGG - chr1_2:71565224-71565243 None:intergenic 45.0%
! CATGACGGAAATGGCATCTA+TGG - chr1_2:71565233-71565252 None:intergenic 45.0%
! CAGTAAGTGCATGACGGAAA+TGG - chr1_2:71565242-71565261 None:intergenic 45.0%
TAAGCCCAGATCAATGAAGC+TGG + chr1_2:71565287-71565306 Msa0089830:CDS 45.0%
GGTCTATAGCAGGATTCTTG+AGG + chr1_2:71565492-71565511 Msa0089830:three_prime_UTR 45.0%
GTCCCAACATAACGAACCAA+AGG + chr1_2:71565607-71565626 Msa0089830:three_prime_UTR 45.0%
!!! ATTTACTATTATTTATTTTA+TGG - chr1_2:71563928-71563947 None:intergenic 5.0%
CGAGAAGCTTCTGCTTGTGA+AGG + chr1_2:71561997-71562016 Msa0089830:five_prime_UTR 50.0%
GAAGCTTCTGCTTGTGAAGG+TGG + chr1_2:71562000-71562019 Msa0089830:five_prime_UTR 50.0%
!! CCGTAACCGCTTTTGGATGA+CGG - chr1_2:71562395-71562414 None:intergenic 50.0%
CCGTCATCCAAAAGCGGTTA+CGG + chr1_2:71562392-71562411 Msa0089830:CDS 50.0%
TCCAAAAGCGGTTACGGCAT+CGG + chr1_2:71562398-71562417 Msa0089830:CDS 50.0%
GTACAACGAAGCAAACACGC+CGG - chr1_2:71562456-71562475 None:intergenic 50.0%
AGAAGTTGAAGCTCTGCAGC+AGG + chr1_2:71562655-71562674 Msa0089830:CDS 50.0%
GAAGCTCTGCAGCAGGAAAA+CGG + chr1_2:71562662-71562681 Msa0089830:CDS 50.0%
GCAACTCTTTGTTCACGGCA+CGG - chr1_2:71562694-71562713 None:intergenic 50.0%
! TCGCTGGAGAACCGATTCAA+TGG + chr1_2:71562743-71562762 Msa0089830:CDS 50.0%
! CTGGAGAACCGATTCAATGG+TGG + chr1_2:71562746-71562765 Msa0089830:CDS 50.0%
! GAGAACCGATTCAATGGTGG+CGG + chr1_2:71562749-71562768 Msa0089830:CDS 50.0%
AGGATCCGCCACCATTGAAT+CGG - chr1_2:71562757-71562776 None:intergenic 50.0%
AGTAGATTGAGTCTGGACGG+AGG - chr1_2:71562777-71562796 None:intergenic 50.0%
CGGAGTAGATTGAGTCTGGA+CGG - chr1_2:71562780-71562799 None:intergenic 50.0%
GATGTGTTGCAAGGTTTCCG+TGG + chr1_2:71562803-71562822 Msa0089830:CDS 50.0%
GGTTTCCGTGGCTTGAATCT+TGG + chr1_2:71562815-71562834 Msa0089830:CDS 50.0%
CGTGGCTTGAATCTTGGAGA+TGG + chr1_2:71562821-71562840 Msa0089830:CDS 50.0%
CGTCGGACTCTCATCAGATT+CGG - chr1_2:71562915-71562934 None:intergenic 50.0%
AGCACATTGGCACAGAACAC+AGG - chr1_2:71563613-71563632 None:intergenic 50.0%
GCGATTGCAGACAATACCGT+GGG - chr1_2:71563676-71563695 None:intergenic 50.0%
TGCGATTGCAGACAATACCG+TGG - chr1_2:71563677-71563696 None:intergenic 50.0%
ATCGCATCAAGCCGCAATTG+TGG + chr1_2:71563691-71563710 Msa0089830:intron 50.0%
CAGTGCCGTAATGAGGGAAT+TGG + chr1_2:71563746-71563765 Msa0089830:intron 50.0%
!!! GCGGCCGCATTTTAAAACCA+TGG + chr1_2:71564043-71564062 Msa0089830:intron 50.0%
GAAAGCTACACCAACAGCAG+TGG - chr1_2:71564472-71564491 None:intergenic 50.0%
CCAAGCACAAGATGTGTCCA+AGG - chr1_2:71564593-71564612 None:intergenic 50.0%
CCTTGGACACATCTTGTGCT+TGG + chr1_2:71564590-71564609 Msa0089830:intron 50.0%
TGTCAAGGAATGGCAAGGCA+GGG - chr1_2:71564743-71564762 None:intergenic 50.0%
AGAGGAAGAGCCTCTTGAGA+TGG + chr1_2:71565020-71565039 Msa0089830:CDS 50.0%
GAAACTGGCACATGCCCTTA+TGG + chr1_2:71565093-71565112 Msa0089830:CDS 50.0%
GACCACTGTCAATTCGCTCA+TGG + chr1_2:71565117-71565136 Msa0089830:CDS 50.0%
TGCCATGAGCGAATTGACAG+TGG - chr1_2:71565122-71565141 None:intergenic 50.0%
!! CAGACCTCAGTTTTGTAGCG+TGG - chr1_2:71565174-71565193 None:intergenic 50.0%
GCTACAAAACTGAGGTCTGC+AGG + chr1_2:71565175-71565194 Msa0089830:CDS 50.0%
CAAAACTGAGGTCTGCAGGA+TGG + chr1_2:71565179-71565198 Msa0089830:CDS 50.0%
GGAACGCTTGCAGCAAATTG+AGG + chr1_2:71565471-71565490 Msa0089830:three_prime_UTR 50.0%
GATCTTCCATCATCGCTGGC+CGG + chr1_2:71562491-71562510 Msa0089830:CDS 55.0%
CCAGCGAAGCTTGAACGAGA+AGG - chr1_2:71562730-71562749 None:intergenic 55.0%
CCTTCTCGTTCAAGCTTCGC+TGG + chr1_2:71562727-71562746 Msa0089830:CDS 55.0%
TTGTTAGTTACGACGGCCGG+AGG - chr1_2:71563031-71563050 None:intergenic 55.0%
! AGCGAGTAGCGCTTTTGGTG+CGG - chr1_2:71563063-71563082 None:intergenic 55.0%
! AGATTGAGTGGAGGAAGCGC+GGG - chr1_2:71563086-71563105 None:intergenic 55.0%
CAGATTGAGTGGAGGAAGCG+CGG - chr1_2:71563087-71563106 None:intergenic 55.0%
ACGTCGCAGTGCCGTAATGA+GGG + chr1_2:71563740-71563759 Msa0089830:intron 55.0%
AAAGGCAGCGACTGCAACAG+CGG + chr1_2:71564024-71564043 Msa0089830:intron 55.0%
CTGTCAAGGAATGGCAAGGC+AGG - chr1_2:71564744-71564763 None:intergenic 55.0%
GCTCAGTCTTGAACATCCCC+TGG - chr1_2:71565056-71565075 None:intergenic 55.0%
!! CAGTTTTGTAGCGTGGGTGG+CGG - chr1_2:71565167-71565186 None:intergenic 55.0%
!! CCTCAGTTTTGTAGCGTGGG+TGG - chr1_2:71565170-71565189 None:intergenic 55.0%
CCACCCACGCTACAAAACTG+AGG + chr1_2:71565167-71565186 Msa0089830:CDS 55.0%
TCTGCAGGATGGTCCTTGCT+GGG + chr1_2:71565190-71565209 Msa0089830:CDS 55.0%
! GCCGATGCCGTAACCGCTTT+TGG - chr1_2:71562402-71562421 None:intergenic 60.0%
GGCGTTCGACTGCATGTGAC+CGG - chr1_2:71562435-71562454 None:intergenic 60.0%
GGTCACATGCAGTCGAACGC+CGG + chr1_2:71562434-71562453 Msa0089830:CDS 60.0%
CTGTTTCCGGCCAGCGATGA+TGG - chr1_2:71562500-71562519 None:intergenic 60.0%
CTGGCCGGAAACAGCAGCAA+CGG + chr1_2:71562506-71562525 Msa0089830:CDS 60.0%
! CTTGAAGCTTGCTCCGCCTC+CGG + chr1_2:71563012-71563031 Msa0089830:CDS 60.0%
TTAGTTACGACGGCCGGAGG+CGG - chr1_2:71563028-71563047 None:intergenic 60.0%
TGCATCACCTGATGCGCCCA+CGG + chr1_2:71563657-71563676 Msa0089830:intron 60.0%
GACAATACCGTGGGCGCATC+AGG - chr1_2:71563667-71563686 None:intergenic 60.0%
CTCATTACGGCACTGCGACG+TGG - chr1_2:71563741-71563760 None:intergenic 60.0%
CACGTCGCAGTGCCGTAATG+AGG + chr1_2:71563739-71563758 Msa0089830:intron 60.0%
TGTGCGAGGAGGGCAGAAAG+AGG + chr1_2:71565002-71565021 Msa0089830:CDS 60.0%
GTCTGCAGGATGGTCCTTGC+TGG + chr1_2:71565189-71565208 Msa0089830:CDS 60.0%
CTGCAGGATGGTCCTTGCTG+GGG + chr1_2:71565191-71565210 Msa0089830:CDS 60.0%
!! GGCATCGGCGTCAACAACGC+CGG + chr1_2:71562413-71562432 Msa0089830:CDS 65.0%
GCCGGAAACAGCAGCAACGG+CGG + chr1_2:71562509-71562528 Msa0089830:CDS 65.0%
!! GCCGCCGTTGCTGCTGTTTC+CGG - chr1_2:71562513-71562532 None:intergenic 65.0%
GGAAACAGCAGCAACGGCGG+CGG + chr1_2:71562512-71562531 Msa0089830:CDS 65.0%
! GCGGGAGCGAGTAGCGCTTT+TGG - chr1_2:71563068-71563087 None:intergenic 65.0%
!! AGCGTGGGTGGCGGATCACT+GGG - chr1_2:71565158-71565177 None:intergenic 65.0%
!! TAGCGTGGGTGGCGGATCAC+TGG - chr1_2:71565159-71565178 None:intergenic 65.0%
ACGGGCACACAACCCCAGCA+AGG - chr1_2:71565206-71565225 None:intergenic 65.0%
GCTGGGGTTGTGTGCCCGTA+TGG + chr1_2:71565207-71565226 Msa0089830:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 71561941 71565879 71561941 ID=Msa0089830;Name=Msa0089830
chr1_2 mRNA 71561941 71565879 71561941 ID=Msa0089830-mRNA-1;Parent=Msa0089830;Name=Msa0089830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=166|1|1|1|0.5|0.33|3|562|357
chr1_2 exon 71561941 71562087 71561941 ID=Msa0089830-mRNA-1:exon:24663;Parent=Msa0089830-mRNA-1
chr1_2 exon 71562349 71563114 71562349 ID=Msa0089830-mRNA-1:exon:24664;Parent=Msa0089830-mRNA-1
chr1_2 exon 71564991 71565879 71564991 ID=Msa0089830-mRNA-1:exon:24665;Parent=Msa0089830-mRNA-1
chr1_2 five_prime_UTR 71561941 71562087 71561941 ID=Msa0089830-mRNA-1:five_prime_utr;Parent=Msa0089830-mRNA-1
chr1_2 five_prime_UTR 71562349 71562367 71562349 ID=Msa0089830-mRNA-1:five_prime_utr;Parent=Msa0089830-mRNA-1
chr1_2 CDS 71562368 71563114 71562368 ID=Msa0089830-mRNA-1:cds;Parent=Msa0089830-mRNA-1
chr1_2 CDS 71564991 71565317 71564991 ID=Msa0089830-mRNA-1:cds;Parent=Msa0089830-mRNA-1
chr1_2 three_prime_UTR 71565318 71565879 71565318 ID=Msa0089830-mRNA-1:three_prime_utr;Parent=Msa0089830-mRNA-1
Gene Sequence

>Msa0089830

ATGCATAACAAGGACGTTTGTTCTCCGTCATCCAAAAGCGGTTACGGCATCGGCGTCAACAACGCCGGTCACATGCAGTCGAACGCCGGCGTGTTTGCTTCGTTGTACTCTGCTCTGAGTAATGATCTTCCATCATCGCTGGCCGGAAACAGCAGCAACGGCGGCGGATTTTCGCTTTATCCTTACTCTGACCTTGGAACAGAGTACGACTCATGCGTGATACAGAAGCATCAGGATATGGTGAATCGTCACAGTATGTTTCTCAGTCGTCTCCTGGAAAGTTCCAAAGAAGTTGAAGCTCTGCAGCAGGAAAACGGACAGCTCCGTGCCGTGAACAAAGAGTTGCAGAAGAATCTGAACCTTCTCGTTCAAGCTTCGCTGGAGAACCGATTCAATGGTGGCGGATCCTCCGTCCAGACTCAATCTACTCCGTTTGATGTGTTGCAAGGTTTCCGTGGCTTGAATCTTGGAGATGGAAAGGAAAACTGTGCTGATTGGAATAGCAATAACATCAATAATAATAACAAGGAGTTGCAGGAAGCTTCCGAATCTGATGAGAGTCCGACGAGTGTGATTGAGAATAACGGTGTTGAAACGGAGAGGTTCTCGCTTCCAAAGAGCATTTCTGTTAGATCCAATGGCTACTTGAAGCTTGCTCCGCCTCCGGCCGTCGTAACTAACAACAATGCTTGCCGCACCAAAAGCGCTACTCGCTCCCGCGCTTCCTCCACTCAATCTGATACAGTTCAAAAGGTATTTGTGCGAGGAGGGCAGAAAGAGGAAGAGCCTCTTGAGATGGTTGTGTACAACCAGGGGATGTTCAAGACTGAGCTCTGTAACAAATGGCAGGAAACTGGCACATGCCCTTATGGAGACCACTGTCAATTCGCTCATGGCATTGGGGAGCTTCGCCCAGTGATCCGCCACCCACGCTACAAAACTGAGGTCTGCAGGATGGTCCTTGCTGGGGTTGTGTGCCCGTATGGCCATAGATGCCATTTCCGTCATGCACTTACTGAACAAGAGAAAGCTGTGTCACAATCTAAGCCCAGATCAATGAAGCTGGAAAGATGA
Protein sequence

>Msa0089830

MHNKDVCSPSSKSGYGIGVNNAGHMQSNAGVFASLYSALSNDLPSSLAGNSSNGGGFSLYPYSDLGTEYDSCVIQKHQDMVNRHSMFLSRLLESSKEVEALQQENGQLRAVNKELQKNLNLLVQASLENRFNGGGSSVQTQSTPFDVLQGFRGLNLGDGKENCADWNSNNINNNNKELQEASESDESPTSVIENNGVETERFSLPKSISVRSNGYLKLAPPPAVVTNNNACRTKSATRSRASSTQSDTVQKVFVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVSQSKPRSMKLER*