AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046450 MtrunA17_Chr1g0210071 93.590 78 5 0 1 78 1 78 1.01e-48 151
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 368 sgRNAs with CRISPR-Local

Find 1005 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATCGTTGCTGGCTCTTC+TGG 0.103983 1_1:-78609002 Msa0046450:five_prime_UTR
GTTAAGAATCATCCGCTTTA+TGG 0.148499 1_1:+78609046 None:intergenic
CATTTGTTACCTACTGAAAT+TGG 0.166599 1_1:+78606403 None:intergenic
GGTATCTTGGTTTGTTTATT+AGG 0.169263 1_1:-78608274 Msa0046450:five_prime_UTR
GATTGATTGGATAGAAAATT+AGG 0.170073 1_1:+78615647 None:intergenic
ATGATCATCCATTGGATATT+TGG 0.185080 1_1:-78609636 Msa0046450:five_prime_UTR
ATCTAGAATATCTTTAAAAT+TGG 0.195138 1_1:+78608959 None:intergenic
GAACAGTACTTACTTATTTC+AGG 0.196948 1_1:+78609759 None:intergenic
TGCTCTGGGCAATGGGCATT+TGG 0.211115 1_1:-78614187 Msa0046450:five_prime_UTR
CAGGAGACATCACGGGTTTC+AGG 0.217384 1_1:-78608339 Msa0046450:five_prime_UTR
GAAGTTTGAGTAATAGTTTA+TGG 0.236691 1_1:-78614944 Msa0046450:five_prime_UTR
TCCTGGCAGGGAGCATTTAC+TGG 0.253016 1_1:-78609268 Msa0046450:intron
TTCCACAGAGTGCCTGTTCT+TGG 0.260765 1_1:+78613891 None:intergenic
GACAAATTTGTATACACTTC+AGG 0.264860 1_1:+78615091 None:intergenic
TGAAAGCATGATAATATTAA+TGG 0.265243 1_1:-78600831 Msa0046450:three_prime_UTR
TTATCCATGGCTGGTCATTC+TGG 0.266610 1_1:-78607761 Msa0046450:exon
CAGTTAAGTGTACGCCTTTA+GGG 0.272713 1_1:+78608694 None:intergenic
GTCAGTATTAATGCCTTTGA+TGG 0.279460 1_1:-78607515 Msa0046450:CDS
AGAGGAAATGAGAAACTTAA+AGG 0.279464 1_1:-78614111 Msa0046450:five_prime_UTR
CCCATGCTTAGATGCATAAA+AGG 0.287270 1_1:-78608309 Msa0046450:five_prime_UTR
GATGATGGAAGGAAACTAAA+AGG 0.287278 1_1:-78613160 Msa0046450:five_prime_UTR
CCAGTTAAGTGTACGCCTTT+AGG 0.290510 1_1:+78608693 None:intergenic
AACATAAAGCCGAAAGATAT+TGG 0.292821 1_1:-78609026 Msa0046450:five_prime_UTR
ATATTATATTTACATAGTTT+AGG 0.293881 1_1:+78615179 None:intergenic
TATTATATTTACATAGTTTA+GGG 0.294205 1_1:+78615180 None:intergenic
TCATCAAAACAGTGGCAATT+AGG 0.297509 1_1:+78607974 None:intergenic
CCTTATTGATATCCCTTTCC+CGG 0.302679 1_1:+78613350 None:intergenic
AAGAAGTTCGGTCGCAATAT+TGG 0.311552 1_1:-78610107 Msa0046450:five_prime_UTR
CATTCAAGACATGAAGAAAA+TGG 0.312687 1_1:-78613220 Msa0046450:five_prime_UTR
AGGTTGATTGGGTGCATAGA+AGG 0.313515 1_1:-78613603 Msa0046450:five_prime_UTR
AAGAAGAAGAGAAGCAATAA+TGG 0.314033 1_1:-78612963 Msa0046450:five_prime_UTR
TTCAATGCAGGCTATCGTTT+TGG 0.314293 1_1:-78610527 Msa0046450:intron
AGACATACCAACATATTATC+AGG 0.325706 1_1:+78609990 None:intergenic
TTTAACTAGGTTCATAAGTT+AGG 0.331059 1_1:-78608059 Msa0046450:five_prime_UTR
TTGGATAGAAAATTAGGGTT+AGG 0.336375 1_1:+78615653 None:intergenic
AAGTGGAAGAATGGGGAGTT+TGG 0.338682 1_1:-78614141 Msa0046450:five_prime_UTR
GACATTTCTAAAGCAATTGA+TGG 0.340006 1_1:-78611927 Msa0046450:five_prime_UTR
ACCAACTGGAGTTAGGAAAT+TGG 0.341121 1_1:-78611636 Msa0046450:intron
GGAAGAGTGAATGGGATTAT+AGG 0.341252 1_1:-78613375 Msa0046450:five_prime_UTR
CTCACTAGAAACAACTTTCA+AGG 0.342434 1_1:-78600963 Msa0046450:three_prime_UTR
GCTCTGGGCAATGGGCATTT+GGG 0.348934 1_1:-78614186 Msa0046450:five_prime_UTR
AAGTATTGTGATGATATATT+TGG 0.350550 1_1:-78611665 Msa0046450:five_prime_UTR
ATAGACGAGAACACAGTTCT+AGG 0.351695 1_1:-78613753 Msa0046450:five_prime_UTR
CTTAATAGCAGAGACTAAAT+TGG 0.351786 1_1:-78615025 Msa0046450:five_prime_UTR
ATTCTTCCACTTATCCCCTT+TGG 0.353729 1_1:+78614152 None:intergenic
ATAGAGACTGGAAGAGTGAA+TGG 0.356745 1_1:-78613384 Msa0046450:five_prime_UTR
ATGATACGATCCAATTGAAT+TGG 0.357627 1_1:-78615352 Msa0046450:five_prime_UTR
ATTGATTGGATAGAAAATTA+GGG 0.358145 1_1:+78615648 None:intergenic
GGGCCGGCCTGCATGACAAT+TGG 0.360459 1_1:-78611211 Msa0046450:five_prime_UTR
GTACCTGGTGCTGGTGGCCT+AGG 0.364585 1_1:-78611828 Msa0046450:five_prime_UTR
TTTGCCGTTACGTATCCTAA+TGG 0.365861 1_1:-78607798 Msa0046450:five_prime_UTR
CCTAAAGGCGTACACTTAAC+TGG 0.366328 1_1:-78608693 Msa0046450:five_prime_UTR
ACGATTGTTCCAATATCTTT+CGG 0.367245 1_1:+78609017 None:intergenic
CAAGGCTGGTTTGGATGAAT+TGG 0.372967 1_1:-78610264 Msa0046450:five_prime_UTR
CAATCGTTGCTGGCTCTTCT+GGG 0.373847 1_1:-78609001 Msa0046450:five_prime_UTR
AAACAGTGAGGGAAGGAAGA+AGG 0.374344 1_1:-78613813 Msa0046450:five_prime_UTR
ATGCATTTCTACTGGATGTT+TGG 0.376594 1_1:-78607738 Msa0046450:CDS
GTGAGACACCAACTGGAGTT+AGG 0.380878 1_1:-78611643 Msa0046450:five_prime_UTR
AAATGCAACATTAATCCATT+AGG 0.382450 1_1:+78607783 None:intergenic
AGATGAAACAAGCAGGAATA+AGG 0.382915 1_1:-78613626 Msa0046450:five_prime_UTR
ATTAGGGTTAGGGTTTGTTT+AGG 0.385335 1_1:+78615664 None:intergenic
TAAGGACAGGAACAAGGATA+TGG 0.392669 1_1:-78613707 Msa0046450:five_prime_UTR
GTTTCAGCTCTTGAGATGTA+TGG 0.396689 1_1:+78614243 None:intergenic
TCGAGCTGGTACTGATGCTC+TGG 0.396967 1_1:-78614202 Msa0046450:five_prime_UTR
GTGGCGGTGTTTGTGACGTT+TGG 0.397366 1_1:+78615560 None:intergenic
TTTGGTAATGCCATGTTTGC+TGG 0.399384 1_1:-78609828 Msa0046450:five_prime_UTR
ACAAATTTGTATACACTTCA+GGG 0.399923 1_1:+78615092 None:intergenic
TCCACAGAGTGCCTGTTCTT+GGG 0.401123 1_1:+78613892 None:intergenic
GCCAACACAATTAGAGAAAT+CGG 0.401364 1_1:-78600809 Msa0046450:three_prime_UTR
GAAGAGAAATGGAAAGAGAT+AGG 0.401548 1_1:-78613492 Msa0046450:five_prime_UTR
ATGATATCATCGTAGGAAAC+TGG 0.401774 1_1:+78607482 None:intergenic
AGGAATCACTGTGTTCTGTT+TGG 0.402703 1_1:+78614712 None:intergenic
ATATGCTTATCCTTACCATT+AGG 0.404985 1_1:+78613286 None:intergenic
AGAGTTATCATTTCTGTTTG+TGG 0.408059 1_1:-78607454 Msa0046450:CDS
AATCGGTGGGCATGATTGAT+TGG 0.409235 1_1:+78615634 None:intergenic
GGAGTCATGACAGGCATAGA+AGG 0.411105 1_1:-78613564 Msa0046450:five_prime_UTR
GCAGGAATAAGGAGGTTGAT+TGG 0.411236 1_1:-78613615 Msa0046450:five_prime_UTR
ACGCACTGGAGGCTAATAGA+AGG 0.412909 1_1:-78614074 Msa0046450:five_prime_UTR
AATACATAAACCAATTCAAT+TGG 0.414316 1_1:+78615342 None:intergenic
GGAGGATTTGTCGTGGTCAT+CGG 0.414618 1_1:+78615581 None:intergenic
TAGGGATAGGAGAAGAGAAA+TGG 0.414878 1_1:-78613503 Msa0046450:five_prime_UTR
TTTATTGAATTCTATTTCAA+TGG 0.418164 1_1:+78615241 None:intergenic
CCTTGTTCCTGTCCTTATCC+CGG 0.419315 1_1:+78613713 None:intergenic
CGTTGCTGAAACCGTTGATT+CGG 0.422642 1_1:-78615487 Msa0046450:five_prime_UTR
TACATTGGAATTACCTGATC+AGG 0.424185 1_1:-78613023 Msa0046450:five_prime_UTR
CCCTCCTCAACGTCATCAGC+AGG 0.424540 1_1:+78615447 None:intergenic
TGGATAGAAAATTAGGGTTA+GGG 0.425312 1_1:+78615654 None:intergenic
CATTCTGGATGCATTTCTAC+TGG 0.425829 1_1:-78607746 Msa0046450:CDS
TGCTGCTGTGGTGGCGGTGA+CGG 0.429170 1_1:+78615538 None:intergenic
ATTAGGCATTTGCGTAGTAC+TGG 0.430049 1_1:+78607991 None:intergenic
CAGTCGGGAGGCCCGGGATA+AGG 0.431094 1_1:-78613725 Msa0046450:five_prime_UTR
AATAATAACAAGACATCAAA+AGG 0.431282 1_1:+78607829 None:intergenic
CACGGAGGTTCGTTCTGTAT+TGG 0.432207 1_1:+78615761 None:intergenic
GAGGATTTGTCGTGGTCATC+GGG 0.433503 1_1:+78615582 None:intergenic
GTGGTGAGAGAGATAGAGAC+TGG 0.436086 1_1:-78613396 Msa0046450:five_prime_UTR
GAATAGGTACAAGGCTGGTT+TGG 0.436379 1_1:-78610273 Msa0046450:intron
GCCTTAGTCACTGCTTGAGT+TGG 0.438081 1_1:-78607893 Msa0046450:five_prime_UTR
CCCTCACTGTTTCCTCATCA+AGG 0.438892 1_1:+78613824 None:intergenic
GGCCGGCCTGCATGACAATT+GGG 0.439555 1_1:-78611210 Msa0046450:five_prime_UTR
AGATCTTCCTCTTCCTGATC+AGG 0.440856 1_1:+78613010 None:intergenic
CCGGGAAAGGGATATCAATA+AGG 0.441537 1_1:-78613350 Msa0046450:five_prime_UTR
AGCATGCTCGTCCCAAGAAC+AGG 0.442509 1_1:-78613903 Msa0046450:five_prime_UTR
CAGGGAAAAGGATGAGGGTA+GGG 0.442698 1_1:-78613521 Msa0046450:five_prime_UTR
GTACTGATGCTCTGGGCAAT+GGG 0.444380 1_1:-78614194 Msa0046450:five_prime_UTR
GATATTGGAACAATCGTTGC+TGG 0.444476 1_1:-78609011 Msa0046450:five_prime_UTR
TCTATTCAGGGAAAAGAAGA+TGG 0.445686 1_1:-78611248 Msa0046450:intron
GCGGCTTCACATGGAATTGA+AGG 0.446623 1_1:-78609539 Msa0046450:five_prime_UTR
TAGGAGCAGGGAAAAGGATG+AGG 0.447852 1_1:-78613527 Msa0046450:five_prime_UTR
TAAAAGCGACTCACAAGATA+TGG 0.448708 1_1:+78609789 None:intergenic
GAGACTGTCAACCGCTTGTC+CGG 0.449666 1_1:+78608918 None:intergenic
TTCTGTACTTAAAGCTTGAA+AGG 0.452151 1_1:+78610183 None:intergenic
GATTAATTTGTAGGTTTCAA+AGG 0.452336 1_1:-78601195 Msa0046450:intron
GTGAATGGGATTATAGGAAC+CGG 0.452821 1_1:-78613369 Msa0046450:five_prime_UTR
AAAAGATAGGAGCAGGGAAA+AGG 0.453034 1_1:-78613533 Msa0046450:five_prime_UTR
AAAAGGATGAGGGTAGGGAT+AGG 0.453871 1_1:-78613516 Msa0046450:five_prime_UTR
CCATTGGATATTTGGTCTGT+AGG 0.454735 1_1:-78609628 Msa0046450:five_prime_UTR
TCAGAGAAGGTACCTGGTGC+TGG 0.456029 1_1:-78611837 Msa0046450:five_prime_UTR
GGTATCACAGTCGGGAGGCC+CGG 0.456564 1_1:-78613732 Msa0046450:five_prime_UTR
GGGATTATAGGAACCGGGAA+AGG 0.458355 1_1:-78613363 Msa0046450:five_prime_UTR
AGAAGTCGATCAAGATCAAT+TGG 0.459282 1_1:-78613967 Msa0046450:five_prime_UTR
GCGAATTCTCCTTTGCATGA+TGG 0.460241 1_1:-78613994 Msa0046450:five_prime_UTR
CAGGAATAAGGAGGTTGATT+GGG 0.461361 1_1:-78613614 Msa0046450:five_prime_UTR
CTTGAAGCATATTCATATCT+CGG 0.461422 1_1:-78607708 Msa0046450:intron
CTAGGCGTTTCAGTGAAGAC+TGG 0.462830 1_1:-78614566 Msa0046450:five_prime_UTR
ATAGTCAGTCTTGTGTCTGC+TGG 0.463496 1_1:+78613849 None:intergenic
TAGAGACTGGAAGAGTGAAT+GGG 0.463970 1_1:-78613383 Msa0046450:five_prime_UTR
AACGATGAAGACGCTCCTAA+TGG 0.464091 1_1:-78613301 Msa0046450:five_prime_UTR
TGTTTGTATGAACTGTATAC+AGG 0.464555 1_1:-78609601 Msa0046450:five_prime_UTR
GCGATGCTTGCGTCGAGAAT+CGG 0.467022 1_1:+78615617 None:intergenic
GAAGGGACATGGTAAAAGAT+AGG 0.467029 1_1:-78613546 Msa0046450:five_prime_UTR
ATATTTGGTGAGACACCAAC+TGG 0.467166 1_1:-78611650 Msa0046450:five_prime_UTR
GAAATTAGTAGGTGCAGATC+CGG 0.467400 1_1:-78610231 Msa0046450:five_prime_UTR
AAGGGGATAAGTGGAAGAAT+GGG 0.471113 1_1:-78614149 Msa0046450:five_prime_UTR
GGTACTGATGCTCTGGGCAA+TGG 0.472335 1_1:-78614195 Msa0046450:five_prime_UTR
AGGTTTCAAAGGAGTGCAAA+TGG 0.473347 1_1:-78601184 Msa0046450:CDS
CAAGATCAATTGGTCATACA+AGG 0.478288 1_1:-78613957 Msa0046450:five_prime_UTR
TTTCCTTCCATCATCTTCCA+TGG 0.479784 1_1:+78613168 None:intergenic
CACACTTCTGATGAAGAAGA+TGG 0.484025 1_1:-78614321 Msa0046450:five_prime_UTR
ATGTCATTGTTTGTGAGCCC+TGG 0.485298 1_1:+78609565 None:intergenic
GAGGTTCGTTCTGTATTGGA+TGG 0.486126 1_1:+78615765 None:intergenic
ACATGGTAAAAGATAGGAGC+AGG 0.486217 1_1:-78613540 Msa0046450:five_prime_UTR
GAACCCAGGAGAAGGTATCT+TGG 0.488648 1_1:-78608287 Msa0046450:five_prime_UTR
TCCGATTTCTCTAATTGTGT+TGG 0.489719 1_1:+78600808 None:intergenic
ACATACAGTAGCTATTGTAT+AGG 0.490137 1_1:+78608193 None:intergenic
AAATGGAAAGAGATAGGAGC+AGG 0.492402 1_1:-78613486 Msa0046450:five_prime_UTR
AACAGTGAGGGAAGGAAGAA+GGG 0.493046 1_1:-78613812 Msa0046450:five_prime_UTR
AGTCTTCCAAAGGGGATAAG+TGG 0.493152 1_1:-78614158 Msa0046450:five_prime_UTR
ATTATGAGAGGGATAGGAGA+AGG 0.493992 1_1:-78613456 Msa0046450:five_prime_UTR
GCAGGGAAAAGGATGAGGGT+AGG 0.494090 1_1:-78613522 Msa0046450:five_prime_UTR
CTTGTTCCTGTCCTTATCCC+GGG 0.494694 1_1:+78613714 None:intergenic
GGTCATTAATGTGGATCCCC+AGG 0.494723 1_1:-78606429 Msa0046450:CDS
TCCAACTCAAGCAGTGACTA+AGG 0.494933 1_1:+78607892 None:intergenic
TGTGGTGGCGGTGACGGTGG+CGG 0.495208 1_1:+78615544 None:intergenic
CACGAACCGTGTTGAGGTGG+TGG 0.495945 1_1:+78600923 None:intergenic
CAAGAGCTGAAACTCAAACT+AGG 0.500893 1_1:-78614233 Msa0046450:five_prime_UTR
CCTACTGAAATTGGAACCCT+GGG 0.502470 1_1:+78606412 None:intergenic
ACCAATTTCCTAACTCCAGT+TGG 0.502751 1_1:+78611635 None:intergenic
CAGGAACAAGGATATGGATA+AGG 0.503113 1_1:-78613701 Msa0046450:five_prime_UTR
GGTCACTTGCCAGTGATGAA+TGG 0.503220 1_1:+78608879 None:intergenic
AGTTTCTCTTTCTATCTGCA+TGG 0.503529 1_1:+78613194 None:intergenic
TCGCCTAGGCCACCAGCACC+AGG 0.505307 1_1:+78611825 None:intergenic
GGGAGGCCCGGGATAAGGAC+AGG 0.505474 1_1:-78613720 Msa0046450:five_prime_UTR
AGAGACGAGATGACAGATAT+CGG 0.505587 1_1:-78613327 Msa0046450:five_prime_UTR
ATGATGGAAGGAAACTAAAA+GGG 0.507418 1_1:-78613159 Msa0046450:intron
ACACAAATTATGAGAGGGAT+AGG 0.509249 1_1:-78613462 Msa0046450:five_prime_UTR
CATATCTATGAAACACTGAC+AGG 0.509895 1_1:+78614635 None:intergenic
GCGGTGTTTGTGACGTTTGG+AGG 0.510321 1_1:+78615563 None:intergenic
GGTTGATTGGGTGCATAGAA+GGG 0.510827 1_1:-78613602 Msa0046450:five_prime_UTR
GCTATTAAGATGTAATGCTA+GGG 0.510960 1_1:+78615039 None:intergenic
TCTCGATGATGAGCCTTTCG+AGG 0.511326 1_1:-78615418 Msa0046450:five_prime_UTR
GTATCACAGTCGGGAGGCCC+GGG 0.511629 1_1:-78613731 Msa0046450:five_prime_UTR
CATCATCCCAATTGTCATGC+AGG 0.512643 1_1:+78611204 None:intergenic
AACTATACCATGGAAGATGA+TGG 0.515407 1_1:-78613175 Msa0046450:five_prime_UTR
AGGAGCAGGGAAAAGGATGA+GGG 0.515545 1_1:-78613526 Msa0046450:five_prime_UTR
AAAGGGGATAAGTGGAAGAA+TGG 0.515903 1_1:-78614150 Msa0046450:five_prime_UTR
CAAACCAAGATACCTTCTCC+TGG 0.516082 1_1:+78608283 None:intergenic
GTCACTTGCCAGTGATGAAT+GGG 0.516367 1_1:+78608880 None:intergenic
GCAAATGTTGATCGAATACA+AGG 0.516631 1_1:-78601104 Msa0046450:CDS
ACCTACTGAAATTGGAACCC+TGG 0.518008 1_1:+78606411 None:intergenic
GGATTATAGGAACCGGGAAA+GGG 0.520483 1_1:-78613362 Msa0046450:five_prime_UTR
ATATGAGCAGGGACAGAACA+AGG 0.521301 1_1:-78613420 Msa0046450:five_prime_UTR
TTATGAGAGGGATAGGAGAA+GGG 0.521459 1_1:-78613455 Msa0046450:five_prime_UTR
AAACTGAAAGAGATATGAGC+AGG 0.522935 1_1:-78613432 Msa0046450:five_prime_UTR
AGTGCAGAACACCACAGTTA+CGG 0.523522 1_1:+78610024 None:intergenic
GTAGTACTGGAACCTGCACC+TGG 0.524176 1_1:+78608004 None:intergenic
CACAGGAATTCCTCTGAAAG+TGG 0.525455 1_1:-78614039 Msa0046450:five_prime_UTR
ATGCTTGCGTCGAGAATCGG+TGG 0.530205 1_1:+78615620 None:intergenic
GTGCAGCAGTAACTTCATAT+CGG 0.531331 1_1:+78610489 None:intergenic
TTTCAACAGTTGTACGAGCT+AGG 0.531749 1_1:-78610451 Msa0046450:five_prime_UTR
GGTGCTGGTGGCCTAGGCGA+GGG 0.531975 1_1:-78611822 Msa0046450:five_prime_UTR
GATTTCCCAACAGAAAATGA+TGG 0.532567 1_1:+78611885 None:intergenic
ATCCCAATTGTCATGCAGGC+CGG 0.533511 1_1:+78611208 None:intergenic
TAGGCGTTTCAGTGAAGACT+GGG 0.536334 1_1:-78614565 Msa0046450:five_prime_UTR
TGACATGTTGCGGCTTCACA+TGG 0.536365 1_1:-78609548 Msa0046450:five_prime_UTR
GCAGCTGAAAACGAAGGAAA+AGG 0.536677 1_1:-78612905 Msa0046450:intron
TGACAATGATGACGACGCAC+TGG 0.536798 1_1:-78614088 Msa0046450:five_prime_UTR
TGCTATTAAGATGTAATGCT+AGG 0.538710 1_1:+78615038 None:intergenic
TGGGTGTTAAGTCTTCCAAA+GGG 0.539150 1_1:-78614167 Msa0046450:five_prime_UTR
CATCACATAAAGTGCATGAA+AGG 0.539442 1_1:-78601151 Msa0046450:CDS
TGGTGCTGGTGGCCTAGGCG+AGG 0.541923 1_1:-78611823 Msa0046450:five_prime_UTR
TATGGATAAGGATAGGAGTC+GGG 0.545165 1_1:-78613689 Msa0046450:five_prime_UTR
ACAAGGATATGGATAAGGAT+AGG 0.545736 1_1:-78613696 Msa0046450:five_prime_UTR
ATATGGATAAGGATAGGAGT+CGG 0.545825 1_1:-78613690 Msa0046450:five_prime_UTR
CTTGCAGTATGATCATCCAT+TGG 0.547251 1_1:-78609644 Msa0046450:five_prime_UTR
TTGGGTGTTAAGTCTTCCAA+AGG 0.548672 1_1:-78614168 Msa0046450:five_prime_UTR
AGGAATCTAAAAGCTGGTAA+TGG 0.549212 1_1:-78610431 Msa0046450:five_prime_UTR
TGGCATGAAAACTTAAGTCT+TGG 0.549736 1_1:+78609233 None:intergenic
GGAGCATCGTCACGGCAGTA+AGG 0.550152 1_1:-78613791 Msa0046450:five_prime_UTR
ATGTGGATAGAGACTTGCAT+AGG 0.550196 1_1:-78613660 Msa0046450:five_prime_UTR
TGATGTAGACGAGGATACAT+TGG 0.550811 1_1:-78613038 Msa0046450:five_prime_UTR
CGAGCTAGGAATCTAAAAGC+TGG 0.551578 1_1:-78610437 Msa0046450:five_prime_UTR
AATATACTTACAGAAACTGC+AGG 0.553596 1_1:+78607563 None:intergenic
TCCTCACAGCAGTTAGCCTA+AGG 0.554425 1_1:+78610084 None:intergenic
ATTGTTGTAGGTCATTAATG+TGG 0.554575 1_1:-78606438 Msa0046450:intron
TGGATGCCGTGGACCATCAA+AGG 0.555105 1_1:+78607502 None:intergenic
TCAATTGGATCGTATCATAC+CGG 0.555339 1_1:+78615357 None:intergenic
TCACGGCAGTAAGGATCTGA+TGG 0.555670 1_1:-78613782 Msa0046450:five_prime_UTR
TTATCATTTCTGTTTGTGGA+TGG 0.559857 1_1:-78607450 Msa0046450:CDS
TATGAAGTTACTGCTGCACA+TGG 0.560432 1_1:-78610485 Msa0046450:five_prime_UTR
CATGTTTGTGTAGTGCAACC+AGG 0.561410 1_1:+78614606 None:intergenic
CTGTATTATGATATCATCGT+AGG 0.561507 1_1:+78607475 None:intergenic
TTCTCATTCAGGAGACATCA+CGG 0.561762 1_1:-78608347 Msa0046450:intron
GCATCCAGAATGACCAGCCA+TGG 0.562913 1_1:+78607757 None:intergenic
TAGGAGTCGGGACCGAGATG+TGG 0.563192 1_1:-78613677 Msa0046450:five_prime_UTR
ACACAATGACGTTTATCATC+CGG 0.565243 1_1:+78610212 None:intergenic
CTATTCAGGGAAAAGAAGAT+GGG 0.565994 1_1:-78611247 Msa0046450:intron
AATAGCAGAGACTAAATTGG+CGG 0.566323 1_1:-78615022 Msa0046450:five_prime_UTR
CATAAAAGGAACCCAGGAGA+AGG 0.566848 1_1:-78608295 Msa0046450:five_prime_UTR
GTATCGTCTTTGACCTCGAA+AGG 0.569406 1_1:+78615405 None:intergenic
GGTCATCGGGAGAAGGTGAT+CGG 0.569520 1_1:+78615595 None:intergenic
GGAATTACCTGATCAGGAAG+AGG 0.569706 1_1:-78613017 Msa0046450:five_prime_UTR
ATTGATCTTCACCGAATCAA+CGG 0.569777 1_1:+78615476 None:intergenic
CCCTGCTGATGACGTTGAGG+AGG 0.570021 1_1:-78615448 Msa0046450:five_prime_UTR
AACGTGGAAGGAGTCATGAC+AGG 0.570595 1_1:-78613573 Msa0046450:five_prime_UTR
CGCACTGGAGGCTAATAGAA+GGG 0.570670 1_1:-78614073 Msa0046450:five_prime_UTR
CAGTTCTAGGTATCACAGTC+GGG 0.572333 1_1:-78613740 Msa0046450:five_prime_UTR
TCGTCTTGGATCCGGACAAG+CGG 0.573309 1_1:-78608929 Msa0046450:five_prime_UTR
GAGAAGGTACCTGGTGCTGG+TGG 0.573867 1_1:-78611834 Msa0046450:five_prime_UTR
CAATTGGTCATACAAGGGAC+AGG 0.574784 1_1:-78613951 Msa0046450:five_prime_UTR
TCTCATTCAGGAGACATCAC+GGG 0.575055 1_1:-78608346 Msa0046450:intron
TTGTCGTGGTCATCGGGAGA+AGG 0.575728 1_1:+78615588 None:intergenic
TCGGTCGCAATATTGGCCTT+AGG 0.576485 1_1:-78610100 Msa0046450:five_prime_UTR
TGCTGTGGTGGCGGTGACGG+TGG 0.576601 1_1:+78615541 None:intergenic
AAACAGCGAACGGTTAGTTA+TGG 0.577881 1_1:+78615734 None:intergenic
CGGCTTCACATGGAATTGAA+GGG 0.578027 1_1:-78609538 Msa0046450:five_prime_UTR
CCACCTGAAAATGTGGATGT+TGG 0.578510 1_1:-78611861 Msa0046450:five_prime_UTR
AGAAGCGAGATGAAACAAGC+AGG 0.578636 1_1:-78613633 Msa0046450:five_prime_UTR
CTGCACCTGGATGAAAATGC+AGG 0.580620 1_1:+78608017 None:intergenic
ACACTTCTGATGAAGAAGAT+GGG 0.581413 1_1:-78614320 Msa0046450:five_prime_UTR
ATAGCAGAGACTAAATTGGC+GGG 0.581617 1_1:-78615021 Msa0046450:five_prime_UTR
TGAAGACGCTCCTAATGGTA+AGG 0.582060 1_1:-78613296 Msa0046450:five_prime_UTR
TTGAACCACCCATTCATCAC+TGG 0.583313 1_1:-78608888 Msa0046450:intron
GAAATCTCCACCTGAAAATG+TGG 0.584728 1_1:-78611868 Msa0046450:five_prime_UTR
CATAACTCTTGCAGAGTGAG+AGG 0.586282 1_1:-78611697 Msa0046450:intron
CCTTTGGAGTACCCTCGCCT+AGG 0.586490 1_1:+78611811 None:intergenic
TTCATAGATATGTAAGAACC+TGG 0.587238 1_1:-78614624 Msa0046450:five_prime_UTR
CCGGGATAAGGACAGGAACA+AGG 0.588233 1_1:-78613713 Msa0046450:five_prime_UTR
ATGTGGAATAGGTACAAGGC+TGG 0.589343 1_1:-78610278 Msa0046450:intron
TGTGGATAGAGACTTGCATA+GGG 0.589685 1_1:-78613659 Msa0046450:five_prime_UTR
ATGAATATGCTTCAAGAACA+CGG 0.591283 1_1:+78607715 None:intergenic
CCTGCTGATGACGTTGAGGA+GGG 0.592333 1_1:-78615447 Msa0046450:five_prime_UTR
GACATGAAAGAAATCTCTCT+AGG 0.592769 1_1:-78614584 Msa0046450:five_prime_UTR
GCAAGTCTCTATCCACATCT+CGG 0.593544 1_1:+78613665 None:intergenic
GGGTTACTGATTGAGAGGGC+CGG 0.593561 1_1:-78611227 Msa0046450:five_prime_UTR
TGTTACAGGATCCTCTTCAG+TGG 0.596016 1_1:+78609213 None:intergenic
TTAATGCCTTTGATGGTCCA+CGG 0.596420 1_1:-78607508 Msa0046450:CDS
TGAATTAATACGATACGATA+CGG 0.596631 1_1:+78615705 None:intergenic
TCACAAACAATGACATGTTG+CGG 0.597495 1_1:-78609558 Msa0046450:five_prime_UTR
GGCGTTTCAGTGAAGACTGG+GGG 0.597869 1_1:-78614563 Msa0046450:five_prime_UTR
TATAAAGCCTGATAATATGT+TGG 0.599860 1_1:-78609997 Msa0046450:intron
AAGTTCAGAAACTGAACGTG+AGG 0.600506 1_1:-78614370 Msa0046450:five_prime_UTR
AATCGTTGCTGGCTCTTCTG+GGG 0.600858 1_1:-78609000 Msa0046450:five_prime_UTR
GTTGGCTCAGAGAAGGTACC+TGG 0.601913 1_1:-78611843 Msa0046450:five_prime_UTR
TGAGGGAAGTCAATAGTTGT+TGG 0.602181 1_1:-78608121 Msa0046450:five_prime_UTR
ACAGTTCTAGGTATCACAGT+CGG 0.602819 1_1:-78613741 Msa0046450:five_prime_UTR
AAGATGGGTTACTGATTGAG+AGG 0.603188 1_1:-78611232 Msa0046450:five_prime_UTR
GTATGAACTGTATACAGGGA+AGG 0.603432 1_1:-78609596 Msa0046450:five_prime_UTR
CACTTTCAGAGGAATTCCTG+TGG 0.604847 1_1:+78614040 None:intergenic
TCATATCACGAACCGTGTTG+AGG 0.604909 1_1:+78600917 None:intergenic
TGTGGATGTTGGCTCAGAGA+AGG 0.605164 1_1:-78611850 Msa0046450:five_prime_UTR
ACTTTCAGAGGAATTCCTGT+GGG 0.605629 1_1:+78614041 None:intergenic
AGCTGAAACTCAAACTAGGA+GGG 0.606017 1_1:-78614229 Msa0046450:five_prime_UTR
GAAGGGAAGTAAATCCCCAC+AGG 0.608154 1_1:-78614056 Msa0046450:five_prime_UTR
TTATGCATCTAAGCATGGGA+GGG 0.611224 1_1:+78608313 None:intergenic
AAACCAAGATACCTTCTCCT+GGG 0.611320 1_1:+78608284 None:intergenic
TCGTAGGAAACTGGATGCCG+TGG 0.612075 1_1:+78607491 None:intergenic
GAGTCATGACAGGCATAGAA+GGG 0.613646 1_1:-78613563 Msa0046450:five_prime_UTR
GAGCTGAAACTCAAACTAGG+AGG 0.614613 1_1:-78614230 Msa0046450:five_prime_UTR
CGAGCTGGTACTGATGCTCT+GGG 0.614942 1_1:-78614201 Msa0046450:five_prime_UTR
AGTTACTGCTGCACATGGGA+AGG 0.616851 1_1:-78610480 Msa0046450:five_prime_UTR
TCTCCCTGCTGATGACGTTG+AGG 0.617799 1_1:-78615451 Msa0046450:five_prime_UTR
ACTAGGAGGGATGTTCGAGC+TGG 0.617858 1_1:-78614216 Msa0046450:five_prime_UTR
CCCAGGGTTCCAATTTCAGT+AGG 0.621337 1_1:-78606412 Msa0046450:intron
CCTCCTCAACGTCATCAGCA+GGG 0.621898 1_1:+78615448 None:intergenic
CCTAGGCGAGGGTACTCCAA+AGG 0.624375 1_1:-78611811 Msa0046450:intron
AATAGCTACTGTATGTGTGA+TGG 0.625832 1_1:-78608186 Msa0046450:five_prime_UTR
CAATGATGACGACGCACTGG+AGG 0.627990 1_1:-78614085 Msa0046450:five_prime_UTR
TCTGATGTGGAATAGGTACA+AGG 0.628781 1_1:-78610282 Msa0046450:intron
ATACCATGGAAGATGATGGA+AGG 0.629792 1_1:-78613171 Msa0046450:five_prime_UTR
TCTAAATATGAATCTGCGTG+AGG 0.632408 1_1:-78610135 Msa0046450:five_prime_UTR
GATGAGGAAACAGTGAGGGA+AGG 0.633357 1_1:-78613820 Msa0046450:five_prime_UTR
TGCTTGCGTCGAGAATCGGT+GGG 0.633974 1_1:+78615621 None:intergenic
GAACAAGCAGCTGAAAACGA+AGG 0.635597 1_1:-78612911 Msa0046450:five_prime_UTR
ACTTGCCAGTGATGAATGGG+TGG 0.636150 1_1:+78608883 None:intergenic
GCAGGGACACAAATTATGAG+AGG 0.636552 1_1:-78613468 Msa0046450:five_prime_UTR
TAGAAAGAGAAACTATACCA+TGG 0.637313 1_1:-78613185 Msa0046450:five_prime_UTR
TGAATGGGATTATAGGAACC+GGG 0.637583 1_1:-78613368 Msa0046450:five_prime_UTR
TAGATGCATAAAAGGAACCC+AGG 0.638348 1_1:-78608301 Msa0046450:five_prime_UTR
AAGGAGTGCAAATGGAGTCG+TGG 0.638736 1_1:-78601176 Msa0046450:CDS
ACTTAACTGGCGGTTCTCAG+TGG 0.638792 1_1:-78608680 Msa0046450:five_prime_UTR
GACGTTTGGAGGATTTGTCG+TGG 0.640302 1_1:+78615574 None:intergenic
GTCATTAATGTGGATCCCCA+GGG 0.640846 1_1:-78606428 Msa0046450:CDS
CTTCTGTGTCCATCATGCAA+AGG 0.640963 1_1:+78613985 None:intergenic
TATCACGAACCGTGTTGAGG+TGG 0.641394 1_1:+78600920 None:intergenic
TCCCAAGAACAGGCACTCTG+TGG 0.641409 1_1:-78613893 Msa0046450:five_prime_UTR
AGATCTGATCAGAATCAAAG+AGG 0.642631 1_1:-78612993 Msa0046450:five_prime_UTR
AACTGAAAGAGATATGAGCA+GGG 0.642845 1_1:-78613431 Msa0046450:five_prime_UTR
TTTATGCATCTAAGCATGGG+AGG 0.643120 1_1:+78608312 None:intergenic
AGATGGGTTACTGATTGAGA+GGG 0.644005 1_1:-78611231 Msa0046450:five_prime_UTR
ACGGTTAGTTATGGCACGCA+CGG 0.644176 1_1:+78615743 None:intergenic
ATGAGCAGGGACAGAACAAG+GGG 0.645511 1_1:-78613418 Msa0046450:five_prime_UTR
TGATGGCAAGAGTGATGATG+TGG 0.646081 1_1:-78611910 Msa0046450:five_prime_UTR
AGTTCAGAAACTGAACGTGA+GGG 0.647635 1_1:-78614369 Msa0046450:five_prime_UTR
GACAATTGGGATGATGCAGA+GGG 0.647904 1_1:-78611197 Msa0046450:five_prime_UTR
GTTACTGCTGCACATGGGAA+GGG 0.648189 1_1:-78610479 Msa0046450:five_prime_UTR
CCTTGATGAGGAAACAGTGA+GGG 0.649321 1_1:-78613824 Msa0046450:five_prime_UTR
CCTACAGACCAAATATCCAA+TGG 0.649683 1_1:+78609628 None:intergenic
TGACAATTGGGATGATGCAG+AGG 0.649970 1_1:-78611198 Msa0046450:five_prime_UTR
GACTGACTATGACCTTGATG+AGG 0.650531 1_1:-78613836 Msa0046450:five_prime_UTR
AAATGTTGATCGAATACAAG+GGG 0.651784 1_1:-78601102 Msa0046450:CDS
CAGGGACACAAATTATGAGA+GGG 0.651855 1_1:-78613467 Msa0046450:five_prime_UTR
AGGCGTTTCAGTGAAGACTG+GGG 0.652244 1_1:-78614564 Msa0046450:five_prime_UTR
CGAACAAGATGATGTAGACG+AGG 0.652405 1_1:-78613047 Msa0046450:five_prime_UTR
AGCAGGGACAGAACAAGGGG+TGG 0.653619 1_1:-78613415 Msa0046450:five_prime_UTR
GGAAGAAGGGAGCATCGTCA+CGG 0.653837 1_1:-78613799 Msa0046450:five_prime_UTR
CTGAAGCATCTCCGTAACTG+TGG 0.656124 1_1:-78610035 Msa0046450:five_prime_UTR
TAAGGCAAAAGAAAGAAGTG+TGG 0.657014 1_1:+78607910 None:intergenic
CTTTCAGAGGAATTCCTGTG+GGG 0.657147 1_1:+78614042 None:intergenic
AACAGGCACTCTGTGGAACG+AGG 0.657876 1_1:-78613886 Msa0046450:five_prime_UTR
TTATTTCGTAGACCATAAAG+CGG 0.658122 1_1:-78609058 Msa0046450:intron
AATGGAAAGAGATAGGAGCA+GGG 0.660641 1_1:-78613485 Msa0046450:five_prime_UTR
TGACAGGCATAGAAGGGACA+TGG 0.660785 1_1:-78613557 Msa0046450:five_prime_UTR
ACGGTAGAACAAACAGCGAA+CGG 0.663750 1_1:+78615724 None:intergenic
CAAATGTTGATCGAATACAA+GGG 0.664634 1_1:-78601103 Msa0046450:CDS
CTATTAAGATGTAATGCTAG+GGG 0.664704 1_1:+78615040 None:intergenic
TGAAACAAGCAGGAATAAGG+AGG 0.664743 1_1:-78613623 Msa0046450:five_prime_UTR
TCTGTTTGGTCACTGAGACG+AGG 0.665264 1_1:+78614726 None:intergenic
TATGAGCAGGGACAGAACAA+GGG 0.668315 1_1:-78613419 Msa0046450:five_prime_UTR
TAATCCATTAGGATACGTAA+CGG 0.668769 1_1:+78607794 None:intergenic
GAAAGAAGTGTGGAAAACAC+AGG 0.668769 1_1:+78607920 None:intergenic
GGATAAGCATATGCGTCGCG+AGG 0.671561 1_1:-78613275 Msa0046450:five_prime_UTR
GGGTGTTAAGTCTTCCAAAG+GGG 0.674122 1_1:-78614166 Msa0046450:five_prime_UTR
AGGGGATAAGTGGAAGAATG+GGG 0.676249 1_1:-78614148 Msa0046450:five_prime_UTR
GTTTGTATGAACTGTATACA+GGG 0.685436 1_1:-78609600 Msa0046450:five_prime_UTR
ATGAAGTTACTGCTGCACAT+GGG 0.687369 1_1:-78610484 Msa0046450:five_prime_UTR
ACTATTATTAGACAAGGACA+TGG 0.691617 1_1:-78611961 Msa0046450:intron
AAGATCAATTGGTCATACAA+GGG 0.695173 1_1:-78613956 Msa0046450:five_prime_UTR
GTTAGTTATGGCACGCACGG+AGG 0.698120 1_1:+78615746 None:intergenic
ATATCTATGAAACACTGACA+GGG 0.702135 1_1:+78614636 None:intergenic
GCCTTAGGCTAACTGCTGTG+AGG 0.702702 1_1:-78610085 Msa0046450:five_prime_UTR
CATGGTAAAAGATAGGAGCA+GGG 0.704476 1_1:-78613539 Msa0046450:five_prime_UTR
TTCTAGGTATCACAGTCGGG+AGG 0.709890 1_1:-78613737 Msa0046450:five_prime_UTR
TTATGTCCACCACCTCAACA+CGG 0.715740 1_1:-78600929 Msa0046450:three_prime_UTR
ACCTTGATGAGGAAACAGTG+AGG 0.717038 1_1:-78613825 Msa0046450:five_prime_UTR
CATTAATTCGAGTATCAATG+TGG 0.723905 1_1:+78614280 None:intergenic
AAAGGCGTACACTTAACTGG+CGG 0.731117 1_1:-78608690 Msa0046450:five_prime_UTR
GTATATTGATTGCAGCAGCG+AGG 0.739145 1_1:-78613071 Msa0046450:intron
CTACTGAAATTGGAACCCTG+GGG 0.778636 1_1:+78606413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATTTACATAGTTTA+GGG + chr1_1:78601383-78601402 None:intergenic 10.0%
!! ATATTATATTTACATAGTTT+AGG + chr1_1:78601384-78601403 None:intergenic 10.0%
!!! ATTTATTTTTGCATATATTA+TGG - chr1_1:78602060-78602079 Msa0046450:intron 10.0%
!!! TTTTTCATATTTATATCTAT+TGG - chr1_1:78604825-78604844 Msa0046450:intron 10.0%
!!! TCAAATATTAGTAATTTTTT+TGG + chr1_1:78607133-78607152 None:intergenic 10.0%
!!! AATTCAATTTTTTGTTTTAT+TGG - chr1_1:78608880-78608899 Msa0046450:intron 10.0%
!!! ATTCAATTTTTTGTTTTATT+GGG - chr1_1:78608881-78608900 Msa0046450:intron 10.0%
!! TATATAATTATTTATGCATT+TGG - chr1_1:78612345-78612364 Msa0046450:intron 10.0%
!!! TTATTTGTTAAAAAAAAGTT+GGG + chr1_1:78613131-78613150 None:intergenic 10.0%
!! ACAAAAACATATTTAATTAT+TGG - chr1_1:78613441-78613460 Msa0046450:five_prime_UTR 10.0%
!! CGAAATTATATAATAAATTA+AGG + chr1_1:78614901-78614920 None:intergenic 10.0%
!!! TATTTTGATTATATTATGAA+TGG + chr1_1:78615566-78615585 None:intergenic 10.0%
!! TTTATTGAATTCTATTTCAA+TGG + chr1_1:78601322-78601341 None:intergenic 15.0%
!!! TTATTGTATTTACAATTTTC+AGG - chr1_1:78601584-78601603 Msa0046450:intron 15.0%
!!! TATTGTATTTACAATTTTCA+GGG - chr1_1:78601585-78601604 Msa0046450:intron 15.0%
!! TATATTCTTATAATATGATG+TGG - chr1_1:78605903-78605922 Msa0046450:intron 15.0%
!! ATATTCTTATAATATGATGT+GGG - chr1_1:78605904-78605923 Msa0046450:intron 15.0%
!! TTGAAATAAAAGTTAGATAA+TGG + chr1_1:78606660-78606679 None:intergenic 15.0%
!!! ATCTAGAATATCTTTAAAAT+TGG + chr1_1:78607604-78607623 None:intergenic 15.0%
!!! TTTATTTGATGATATTTTGA+TGG - chr1_1:78608937-78608956 Msa0046450:five_prime_UTR 15.0%
!! TGAAGGTAAAATAAAAAAAT+AGG + chr1_1:78609440-78609459 None:intergenic 15.0%
!!! AATGTTTGAATTTTCATTAT+GGG - chr1_1:78610542-78610561 Msa0046450:intron 15.0%
!!! AATGTTTGAATTTTCATTAT+GGG - chr1_1:78610542-78610561 Msa0046450:intron 15.0%
!!! TTTTAAGATATTTATTAGAC+CGG - chr1_1:78611218-78611237 Msa0046450:five_prime_UTR 15.0%
!!! CATGGTAATTTTTTTTATTT+AGG + chr1_1:78611332-78611351 None:intergenic 15.0%
!! TTTGAAAAATTTGTATCTAT+GGG + chr1_1:78611409-78611428 None:intergenic 15.0%
!!! TGATATCTATATTTACTTTT+TGG - chr1_1:78611510-78611529 Msa0046450:intron 15.0%
!!! GATATCTATATTTACTTTTT+GGG - chr1_1:78611511-78611530 Msa0046450:intron 15.0%
!! ACAAAATTCTGAATATTTAT+AGG - chr1_1:78611772-78611791 Msa0046450:intron 15.0%
!! CAAAATTCTGAATATTTATA+GGG - chr1_1:78611773-78611792 Msa0046450:intron 15.0%
!!! TTTTCAATGATTATTTTTGA+TGG - chr1_1:78612212-78612231 Msa0046450:intron 15.0%
!!! TTTTTGATGGATTTTAATAA+TGG - chr1_1:78612225-78612244 Msa0046450:intron 15.0%
!!! TTTTGATGGATTTTAATAAT+GGG - chr1_1:78612226-78612245 Msa0046450:intron 15.0%
!!! AAGAATTATGGATTATTAAT+AGG - chr1_1:78612661-78612680 Msa0046450:intron 15.0%
!!! AGAATTATGGATTATTAATA+GGG - chr1_1:78612662-78612681 Msa0046450:intron 15.0%
!!! TTTTATTGAACTTTTGTTTT+TGG + chr1_1:78612794-78612813 None:intergenic 15.0%
!!! TCATAATATGAATTTTACAT+GGG + chr1_1:78613075-78613094 None:intergenic 15.0%
!!! TTCATAATATGAATTTTACA+TGG + chr1_1:78613076-78613095 None:intergenic 15.0%
!!! CTTATTTGTTAAAAAAAAGT+TGG + chr1_1:78613132-78613151 None:intergenic 15.0%
!!! CAAATCTATTTTTTTTTTTG+GGG + chr1_1:78613162-78613181 None:intergenic 15.0%
!!! CCAAATCTATTTTTTTTTTT+GGG + chr1_1:78613163-78613182 None:intergenic 15.0%
!!! ACCAAATCTATTTTTTTTTT+TGG + chr1_1:78613164-78613183 None:intergenic 15.0%
!!! ATGAGTATTTATATTTTTTG+CGG - chr1_1:78613204-78613223 Msa0046450:five_prime_UTR 15.0%
!! ACAAAAACTAACTTAAAAAT+AGG - chr1_1:78613330-78613349 Msa0046450:five_prime_UTR 15.0%
!! CAAAAACTAACTTAAAAATA+GGG - chr1_1:78613331-78613350 Msa0046450:five_prime_UTR 15.0%
!!! AAAACAATTTTTTATGTAGA+AGG + chr1_1:78613570-78613589 None:intergenic 15.0%
!! TTTATTATAATGTTGTGATT+AGG - chr1_1:78613682-78613701 Msa0046450:five_prime_UTR 15.0%
!! AGTTTGAAAATAGTATATTA+GGG + chr1_1:78614363-78614382 None:intergenic 15.0%
!!! GAAATAGTATTTTTTTTTTG+TGG + chr1_1:78614460-78614479 None:intergenic 15.0%
!!! AATGTTTAGTTTTTTTTTGT+AGG - chr1_1:78614530-78614549 Msa0046450:intron 15.0%
!!! TTCTAACTTATTTTCTATAA+AGG - chr1_1:78614665-78614684 Msa0046450:five_prime_UTR 15.0%
!! TATATAATTTCGGTTTAATT+TGG - chr1_1:78614909-78614928 Msa0046450:five_prime_UTR 15.0%
!!! ATATAATTTCGGTTTAATTT+GGG - chr1_1:78614910-78614929 Msa0046450:five_prime_UTR 15.0%
!! TACACAATAAAACATTAAAA+GGG + chr1_1:78614968-78614987 None:intergenic 15.0%
!! TTACACAATAAAACATTAAA+AGG + chr1_1:78614969-78614988 None:intergenic 15.0%
!! AATTCAACAATAGTATAAAA+AGG - chr1_1:78615031-78615050 Msa0046450:five_prime_UTR 15.0%
!!! TTATATGTTGATTAATTTGT+AGG - chr1_1:78615356-78615375 Msa0046450:five_prime_UTR 15.0%
!! ATTGATTGGATAGAAAATTA+GGG + chr1_1:78600915-78600934 None:intergenic 20.0%
!! AATACATAAACCAATTCAAT+TGG + chr1_1:78601221-78601240 None:intergenic 20.0%
!!! TAAATTGACGAATTTTGTAT+AGG + chr1_1:78601416-78601435 None:intergenic 20.0%
!! TCATTATACAATCCAAAAAA+AGG + chr1_1:78601871-78601890 None:intergenic 20.0%
!! TGCACTTAATTAATTCTTTA+TGG - chr1_1:78602146-78602165 Msa0046450:intron 20.0%
!! ACTTAATTAATTCTTTATGG+TGG - chr1_1:78602149-78602168 Msa0046450:intron 20.0%
!! CTTAATTAATTCTTTATGGT+GGG - chr1_1:78602150-78602169 Msa0046450:intron 20.0%
!! TTTACTATAAAACTTTGTTC+TGG - chr1_1:78603435-78603454 Msa0046450:intron 20.0%
!!! TTTACTTCTGCTTTTTTTAT+AGG - chr1_1:78603680-78603699 Msa0046450:intron 20.0%
!! ACTACTATTTATAGTATGTT+TGG - chr1_1:78604018-78604037 Msa0046450:intron 20.0%
!! AAAAATAATAAATGCTGCAT+TGG + chr1_1:78604144-78604163 None:intergenic 20.0%
!!! AATAAATAAGGGTATAATAG+TGG + chr1_1:78604169-78604188 None:intergenic 20.0%
!! GGATGAAATTCAATAAATAA+GGG + chr1_1:78604180-78604199 None:intergenic 20.0%
!! TGGATGAAATTCAATAAATA+AGG + chr1_1:78604181-78604200 None:intergenic 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG + chr1_1:78604264-78604283 None:intergenic 20.0%
!!! TATTTAAAGTTAATTACAGC+TGG - chr1_1:78604346-78604365 Msa0046450:intron 20.0%
!! AATGAAATGCATATACATTA+AGG - chr1_1:78604507-78604526 Msa0046450:intron 20.0%
!! TAATACACTATTATTAGACA+AGG - chr1_1:78604593-78604612 Msa0046450:intron 20.0%
!!! AAGTATTGTGATGATATATT+TGG - chr1_1:78604895-78604914 Msa0046450:intron 20.0%
!! AAATCGACAAAATATACAAT+TGG + chr1_1:78605254-78605273 None:intergenic 20.0%
!!! AATTGTATATTTTGTCGATT+TGG - chr1_1:78605253-78605272 Msa0046450:intron 20.0%
!!! TAACTTTTTTTTTGTGACAA+CGG + chr1_1:78605657-78605676 None:intergenic 20.0%
!! GTTATTATATCTAATATCCT+TGG - chr1_1:78605969-78605988 Msa0046450:intron 20.0%
!! ATATTCTTATATTTCAATGC+AGG - chr1_1:78606021-78606040 Msa0046450:intron 20.0%
!!! ATGGCTATTTCATTTAATAA+AGG + chr1_1:78606641-78606660 None:intergenic 20.0%
!! TTTGTACATATTTATCCAAT+TGG - chr1_1:78607745-78607764 Msa0046450:CDS 20.0%
!! TATTTATCCAATTGGTATTA+AGG - chr1_1:78607753-78607772 Msa0046450:CDS 20.0%
!! TTTCTTAATAATCTTTGCAT+TGG - chr1_1:78608097-78608116 Msa0046450:five_prime_UTR 20.0%
!!! GCATTGATAACAAATTTTAA+TGG + chr1_1:78608348-78608367 None:intergenic 20.0%
!! AATAATAACAAGACATCAAA+AGG + chr1_1:78608734-78608753 None:intergenic 20.0%
!!! TTTTCATGTCTTATCTTTTT+AGG - chr1_1:78608960-78608979 Msa0046450:five_prime_UTR 20.0%
!! CTATAAAAAATTAAAGCTGA+AGG + chr1_1:78609457-78609476 None:intergenic 20.0%
!! TAATTGTACATCGAAATTTA+GGG + chr1_1:78609666-78609685 None:intergenic 20.0%
!! TTAATTGTACATCGAAATTT+AGG + chr1_1:78609667-78609686 None:intergenic 20.0%
!! TACAACAATAAAATCAAATC+AGG + chr1_1:78610111-78610130 None:intergenic 20.0%
!!! TGATTTGATTTTATTGTTGT+AGG - chr1_1:78610110-78610129 Msa0046450:five_prime_UTR 20.0%
!! CTTTCAAATTTCATTATCTA+AGG + chr1_1:78610210-78610229 None:intergenic 20.0%
!! TAGATAATGAAATTTGAAAG+AGG - chr1_1:78610210-78610229 Msa0046450:five_prime_UTR 20.0%
!!! CAATGTTTGAATTTTCATTA+TGG - chr1_1:78610541-78610560 Msa0046450:intron 20.0%
!!! ATGTTTGAATTTTCATTATG+GGG - chr1_1:78610543-78610562 Msa0046450:intron 20.0%
!!! CAATGTTTGAATTTTCATTA+TGG - chr1_1:78610541-78610560 Msa0046450:intron 20.0%
!!! ATGTTTGAATTTTCATTATG+GGG - chr1_1:78610543-78610562 Msa0046450:intron 20.0%
!! CATCAATCAATTCTATAAAT+TGG + chr1_1:78611058-78611077 None:intergenic 20.0%
!!! TTTAAGATATTTATTAGACC+GGG - chr1_1:78611219-78611238 Msa0046450:five_prime_UTR 20.0%
!! GTTTGAAAAATTTGTATCTA+TGG + chr1_1:78611410-78611429 None:intergenic 20.0%
!! AAATATAGATATCATAGAAG+TGG + chr1_1:78611504-78611523 None:intergenic 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr1_1:78611554-78611573 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr1_1:78611555-78611574 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr1_1:78611742-78611761 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr1_1:78611741-78611760 None:intergenic 20.0%
!!! ATGCTAATGGAAAATTTTAT+AGG - chr1_1:78611712-78611731 Msa0046450:intron 20.0%
!!! TGCTAATGGAAAATTTTATA+GGG - chr1_1:78611713-78611732 Msa0046450:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG - chr1_1:78611741-78611760 Msa0046450:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG - chr1_1:78611742-78611761 Msa0046450:intron 20.0%
!! AACATGGAAAAAAAAAGTAA+GGG + chr1_1:78611816-78611835 None:intergenic 20.0%
!! TAACATGGAAAAAAAAAGTA+AGG + chr1_1:78611817-78611836 None:intergenic 20.0%
!! AAAATATGTAATCAATGCAT+TGG - chr1_1:78611931-78611950 Msa0046450:five_prime_UTR 20.0%
!!! ATTCAATTTTTATTGTTGTG+GGG + chr1_1:78612151-78612170 None:intergenic 20.0%
!!! CATTCAATTTTTATTGTTGT+GGG + chr1_1:78612152-78612171 None:intergenic 20.0%
!!! ACATTCAATTTTTATTGTTG+TGG + chr1_1:78612153-78612172 None:intergenic 20.0%
!!! TTTGATGGATTTTAATAATG+GGG - chr1_1:78612227-78612246 Msa0046450:intron 20.0%
!! TGTATAAACAAGTTATTTGA+CGG - chr1_1:78612636-78612655 Msa0046450:intron 20.0%
!! TTTGTCTAAAAAATAGTTCT+AGG + chr1_1:78612820-78612839 None:intergenic 20.0%
!!! TTTTAAAACAATGTTATCCA+TGG - chr1_1:78612869-78612888 Msa0046450:intron 20.0%
!!! CATCATATTTTTCTAAGTAT+TGG + chr1_1:78612946-78612965 None:intergenic 20.0%
!! CCCAAAAAAAAAAATAGATT+TGG - chr1_1:78613160-78613179 Msa0046450:five_prime_UTR 20.0%
!! GAAATTGTGTAAAAATATGT+AGG + chr1_1:78613300-78613319 None:intergenic 20.0%
!!! AGTTTATTTTATTTTTCACG+AGG - chr1_1:78613539-78613558 Msa0046450:five_prime_UTR 20.0%
!!! TTTCAAGTTTAACACTTAAA+CGG - chr1_1:78613773-78613792 Msa0046450:five_prime_UTR 20.0%
!! ATAATAAAAAAAGGCAGAAT+AGG + chr1_1:78613834-78613853 None:intergenic 20.0%
!! TAACAAAAAAAATGCCTTTA+AGG + chr1_1:78613895-78613914 None:intergenic 20.0%
!! GTTTGAAAATAGTATATTAG+GGG + chr1_1:78614362-78614381 None:intergenic 20.0%
!! CAGTTTGAAAATAGTATATT+AGG + chr1_1:78614364-78614383 None:intergenic 20.0%
!!! ATAGTATTTTTTTTTTGTGG+TGG + chr1_1:78614457-78614476 None:intergenic 20.0%
!!! ACTTTTTAACTAATATGTTG+CGG + chr1_1:78614576-78614595 None:intergenic 20.0%
!! TAGAAAATAAGTTAGAAAAG+AGG + chr1_1:78614662-78614681 None:intergenic 20.0%
!! AACAATAGTATAAAAAGGTT+GGG - chr1_1:78615036-78615055 Msa0046450:five_prime_UTR 20.0%
!!! ATTTTTGTATCAAGTATGAA+CGG + chr1_1:78615266-78615285 None:intergenic 20.0%
!!! TGAAAGCATGATAATATTAA+TGG - chr1_1:78615729-78615748 Msa0046450:five_prime_UTR 20.0%
!!! TTGATTTTGTATCTACTAAT+TGG - chr1_1:78615777-78615796 Msa0046450:five_prime_UTR 20.0%
! TGAATTAATACGATACGATA+CGG + chr1_1:78600858-78600877 None:intergenic 25.0%
! GATTGATTGGATAGAAAATT+AGG + chr1_1:78600916-78600935 None:intergenic 25.0%
! ACAAATTTGTATACACTTCA+GGG + chr1_1:78601471-78601490 None:intergenic 25.0%
!!! TACAATTTTCAGGGATTAAA+TGG - chr1_1:78601594-78601613 Msa0046450:intron 25.0%
! GAAGTTTGAGTAATAGTTTA+TGG - chr1_1:78601616-78601635 Msa0046450:intron 25.0%
!!! ATAATATTTTTTGACCCCAT+AGG - chr1_1:78603870-78603889 Msa0046450:intron 25.0%
!! ATAGCAGAGATCATATTTTA+CGG + chr1_1:78603900-78603919 None:intergenic 25.0%
! TTCACTAACTACAATTAATG+AGG - chr1_1:78604211-78604230 Msa0046450:intron 25.0%
! TTTACATGAGTTACAAAGAA+TGG + chr1_1:78604414-78604433 None:intergenic 25.0%
! CTCAAATATGACGATAATAT+GGG + chr1_1:78604557-78604576 None:intergenic 25.0%
! TCTCAAATATGACGATAATA+TGG + chr1_1:78604558-78604577 None:intergenic 25.0%
! TTAGGAAATTGGTAAGTATT+TGG - chr1_1:78604935-78604954 Msa0046450:intron 25.0%
! TCTTTCTTGAATGATAATCT+AGG - chr1_1:78605015-78605034 Msa0046450:intron 25.0%
!! ACATTTTCTATCTTCTATTC+AGG - chr1_1:78605299-78605318 Msa0046450:intron 25.0%
!! CATTTTCTATCTTCTATTCA+GGG - chr1_1:78605300-78605319 Msa0046450:intron 25.0%
!! GTTTTCCATCAAAATAGTTA+TGG - chr1_1:78605546-78605565 Msa0046450:intron 25.0%
!! CAACTTAAAATGCTTGTTAA+GGG + chr1_1:78605631-78605650 None:intergenic 25.0%
!! ACAACTTAAAATGCTTGTTA+AGG + chr1_1:78605632-78605651 None:intergenic 25.0%
! GTTATTATGTCTAATATCCT+TGG - chr1_1:78605852-78605871 Msa0046450:intron 25.0%
! AGAATATAAACCCATGAAAT+GGG + chr1_1:78605891-78605910 None:intergenic 25.0%
! AAGAATATAAACCCATGAAA+TGG + chr1_1:78605892-78605911 None:intergenic 25.0%
! AAGAATATAAACCCATGAAA+CGG + chr1_1:78605892-78605911 None:intergenic 25.0%
!!! ATTTTTATTGCTACTTCATC+TGG + chr1_1:78606159-78606178 None:intergenic 25.0%
! AAAGTGAAAAGGATTGATTA+AGG + chr1_1:78606227-78606246 None:intergenic 25.0%
!! TAATCAATCCTTTTCACTTT+TGG - chr1_1:78606227-78606246 Msa0046450:intron 25.0%
!!! AATCAATCCTTTTCACTTTT+GGG - chr1_1:78606228-78606247 Msa0046450:intron 25.0%
!!! GTCATTTTGAAGAAATTAGT+AGG - chr1_1:78606318-78606337 Msa0046450:intron 25.0%
! TATAAAGCCTGATAATATGT+TGG - chr1_1:78606563-78606582 Msa0046450:intron 25.0%
!! TTTCAATTTCCTTTTCTGTA+AGG - chr1_1:78606674-78606693 Msa0046450:intron 25.0%
! AGTAACTAAGAAAAAGTAGT+TGG + chr1_1:78606851-78606870 None:intergenic 25.0%
! AACAGTATATCTTTACCTTA+CGG + chr1_1:78607069-78607088 None:intergenic 25.0%
!!! AGATATACTGTTTAGTCTTA+TGG - chr1_1:78607077-78607096 Msa0046450:intron 25.0%
! CAAACCAAAATTTCAATTGA+AGG + chr1_1:78607233-78607252 None:intergenic 25.0%
!! TAAAATTGGCCAACATTTTT+GGG + chr1_1:78607590-78607609 None:intergenic 25.0%
!! TTAAAATTGGCCAACATTTT+TGG + chr1_1:78607591-78607610 None:intergenic 25.0%
!! TCTAGATAAAATTTTCGTCT+TGG - chr1_1:78607617-78607636 Msa0046450:intron 25.0%
! ATATCAGTGAATATCATTTC+AGG + chr1_1:78607726-78607745 None:intergenic 25.0%
! ATTAGAACCTTAATACCAAT+TGG + chr1_1:78607763-78607782 None:intergenic 25.0%
!! GTATTAAGGTTCTAATCATA+TGG - chr1_1:78607767-78607786 Msa0046450:exon 25.0%
! TACTATTTATCTTCTCTGTA+CGG - chr1_1:78607790-78607809 Msa0046450:five_prime_UTR 25.0%
! AACTCATAGTATAGTTTCAA+TGG + chr1_1:78607999-78608018 None:intergenic 25.0%
! GAAAAGTAGTGTGAAAAAAA+AGG + chr1_1:78608081-78608100 None:intergenic 25.0%
! TCTAATTGAATTTCTCATTC+AGG - chr1_1:78608202-78608221 Msa0046450:five_prime_UTR 25.0%
!!! CAATTGTTTGTGTTTTAACT+AGG - chr1_1:78608488-78608507 Msa0046450:intron 25.0%
! TTTAACTAGGTTCATAAGTT+AGG - chr1_1:78608501-78608520 Msa0046450:intron 25.0%
! AAATGCAACATTAATCCATT+AGG + chr1_1:78608780-78608799 None:intergenic 25.0%
!! TTAATGTTGCATTTTATCCA+TGG - chr1_1:78608786-78608805 Msa0046450:intron 25.0%
! AATACTGACAAAAATGAGAA+AGG + chr1_1:78609034-78609053 None:intergenic 25.0%
! TAGGCATTTAGAAATTTAAG+AGG - chr1_1:78609267-78609286 Msa0046450:intron 25.0%
!! TTTAGAAATTTAAGAGGTGT+TGG - chr1_1:78609273-78609292 Msa0046450:intron 25.0%
! TTTAAATCCAAAAGTTTGTC+TGG + chr1_1:78609313-78609332 None:intergenic 25.0%
! ATTTACTACAAATAACCAAG+TGG + chr1_1:78609634-78609653 None:intergenic 25.0%
!!! TTTTGATTTTGATATTCCCT+TGG - chr1_1:78610389-78610408 Msa0046450:five_prime_UTR 25.0%
!!! TTTGATTTTGATATTCCCTT+GGG - chr1_1:78610390-78610409 Msa0046450:five_prime_UTR 25.0%
!!! ATTTTAGAAAGCTTACATGA+CGG + chr1_1:78610453-78610472 None:intergenic 25.0%
!!! TCATGTAAGCTTTCTAAAAT+TGG - chr1_1:78610453-78610472 Msa0046450:five_prime_UTR 25.0%
!! TGTTTGAATTTTCATTATGG+GGG - chr1_1:78610544-78610563 Msa0046450:intron 25.0%
!!! ATTTTAGAAAGCTTACATGA+CGG + chr1_1:78610453-78610472 None:intergenic 25.0%
!!! TCATGTAAGCTTTCTAAAAT+TGG - chr1_1:78610453-78610472 Msa0046450:five_prime_UTR 25.0%
!! TGTTTGAATTTTCATTATGG+GGG - chr1_1:78610544-78610563 Msa0046450:intron 25.0%
!!! ATTTTAGAAAGCTTACATGA+CGG + chr1_1:78610453-78610472 None:intergenic 25.0%
!!! TCATGTAAGCTTTCTAAAAT+TGG - chr1_1:78610453-78610472 Msa0046450:five_prime_UTR 25.0%
!! TTGAATTTTCTTCATGCTAT+AGG - chr1_1:78610827-78610846 Msa0046450:intron 25.0%
!! CTTCTTGTTTCATAAATAGA+TGG + chr1_1:78611192-78611211 None:intergenic 25.0%
! CATCTATTTATGAAACAAGA+AGG - chr1_1:78611190-78611209 Msa0046450:five_prime_UTR 25.0%
! TTACTTTACTATTCAATCCT+TGG - chr1_1:78611272-78611291 Msa0046450:intron 25.0%
! GTCAAAAATTAAAAGTTCCA+AGG + chr1_1:78611292-78611311 None:intergenic 25.0%
!!! TTTCAAACTAACTTGTTTTC+AGG - chr1_1:78611422-78611441 Msa0046450:intron 25.0%
!!! TTCAAACTAACTTGTTTTCA+GGG - chr1_1:78611423-78611442 Msa0046450:intron 25.0%
! ATCAGAATCATAATCACTTT+AGG + chr1_1:78611453-78611472 None:intergenic 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr1_1:78611618-78611637 Msa0046450:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr1_1:78611619-78611638 Msa0046450:intron 25.0%
!! ATTTTCCTTAAGCATTTTAG+GGG - chr1_1:78611620-78611639 Msa0046450:intron 25.0%
!! AAAACTTCCATCAACATTTT+TGG + chr1_1:78611646-78611665 None:intergenic 25.0%
!!! GCTGATAGAAATTTTTTATG+AGG - chr1_1:78611682-78611701 Msa0046450:five_prime_UTR 25.0%
! AAGTCTGTGAAATATTAATC+AGG + chr1_1:78611857-78611876 None:intergenic 25.0%
! AAAATAGTAAAGCTAAGTGT+TGG + chr1_1:78612191-78612210 None:intergenic 25.0%
! CTTACAAAAATATTACCAGT+CGG + chr1_1:78612391-78612410 None:intergenic 25.0%
! TTTCATGATTTCTCAACTAA+AGG + chr1_1:78612486-78612505 None:intergenic 25.0%
! TATTTGACGGAAAAGAATTA+TGG - chr1_1:78612649-78612668 Msa0046450:intron 25.0%
!! TATGGATTATTAATAGGGAT+TGG - chr1_1:78612667-78612686 Msa0046450:intron 25.0%
! ATGCAGATACGTATATATTA+GGG - chr1_1:78612963-78612982 Msa0046450:five_prime_UTR 25.0%
! TCTAGTTGCACTAATAATTA+GGG + chr1_1:78613513-78613532 None:intergenic 25.0%
! ATCTAGTTGCACTAATAATT+AGG + chr1_1:78613514-78613533 None:intergenic 25.0%
!!! CAATTTTTTATGTAGAAGGA+TGG + chr1_1:78613566-78613585 None:intergenic 25.0%
! CATTTCATCAAGAAATGTTT+AGG + chr1_1:78613799-78613818 None:intergenic 25.0%
! AATGTTAAAAGAGTCCTTAA+AGG - chr1_1:78613878-78613897 Msa0046450:five_prime_UTR 25.0%
! GAGGAACTTAAAAATTGTAT+TGG - chr1_1:78614099-78614118 Msa0046450:five_prime_UTR 25.0%
! GAACTTAAAAATTGTATTGG+AGG - chr1_1:78614102-78614121 Msa0046450:five_prime_UTR 25.0%
! TTAAAAATTGTATTGGAGGA+GGG - chr1_1:78614106-78614125 Msa0046450:five_prime_UTR 25.0%
! GTGAAAAATATGAGTGAAAA+TGG + chr1_1:78614266-78614285 None:intergenic 25.0%
! ATAAATGTAAGAATGCATAG+TGG + chr1_1:78614816-78614835 None:intergenic 25.0%
!! TGGCTAAGAAGAATTTTAAA+AGG + chr1_1:78615008-78615027 None:intergenic 25.0%
! TATACTATTGTTGAATTGAG+TGG + chr1_1:78615028-78615047 None:intergenic 25.0%
! CAACAATAGTATAAAAAGGT+TGG - chr1_1:78615035-78615054 Msa0046450:five_prime_UTR 25.0%
!! TTTTTGTATCAAGTATGAAC+GGG + chr1_1:78615265-78615284 None:intergenic 25.0%
!!! GATTAATTTGTAGGTTTCAA+AGG - chr1_1:78615365-78615384 Msa0046450:five_prime_UTR 25.0%
!! TTTAGGTTTTTGCGGTTAAT+TGG + chr1_1:78600882-78600901 None:intergenic 30.0%
TGGATAGAAAATTAGGGTTA+GGG + chr1_1:78600909-78600928 None:intergenic 30.0%
TTGGATAGAAAATTAGGGTT+AGG + chr1_1:78600910-78600929 None:intergenic 30.0%
TCGATCTCATAACAAAAATC+CGG - chr1_1:78601184-78601203 Msa0046450:CDS 30.0%
ATGATACGATCCAATTGAAT+TGG - chr1_1:78601208-78601227 Msa0046450:intron 30.0%
! GACGAATTTTGTATAGGTTA+TGG + chr1_1:78601410-78601429 None:intergenic 30.0%
GACAAATTTGTATACACTTC+AGG + chr1_1:78601472-78601491 None:intergenic 30.0%
CTATTAAGATGTAATGCTAG+GGG + chr1_1:78601523-78601542 None:intergenic 30.0%
GCTATTAAGATGTAATGCTA+GGG + chr1_1:78601524-78601543 None:intergenic 30.0%
TGCTATTAAGATGTAATGCT+AGG + chr1_1:78601525-78601544 None:intergenic 30.0%
CTTAATAGCAGAGACTAAAT+TGG - chr1_1:78601535-78601554 Msa0046450:intron 30.0%
!!! TGGCGGGTTTTATATATTAT+AGG - chr1_1:78601555-78601574 Msa0046450:intron 30.0%
!! GGCGGGTTTTATATATTATA+GGG - chr1_1:78601556-78601575 Msa0046450:intron 30.0%
!!! AACACAGTGATTCCTTTTTT+TGG - chr1_1:78601856-78601875 Msa0046450:intron 30.0%
ATATCTATGAAACACTGACA+GGG + chr1_1:78601927-78601946 None:intergenic 30.0%
TTCATAGATATGTAAGAACC+TGG - chr1_1:78601936-78601955 Msa0046450:intron 30.0%
!! TACAGTTAATTTGTAAGAGC+TGG - chr1_1:78602022-78602041 Msa0046450:intron 30.0%
CATTAATTCGAGTATCAATG+TGG + chr1_1:78602283-78602302 None:intergenic 30.0%
AGAGGAAATGAGAAACTTAA+AGG - chr1_1:78602449-78602468 Msa0046450:intron 30.0%
AAGATCAATTGGTCATACAA+GGG - chr1_1:78602604-78602623 Msa0046450:intron 30.0%
ATATGCTTATCCTTACCATT+AGG + chr1_1:78603277-78603296 None:intergenic 30.0%
CATTCAAGACATGAAGAAAA+TGG - chr1_1:78603340-78603359 Msa0046450:intron 30.0%
TAGAAAGAGAAACTATACCA+TGG - chr1_1:78603375-78603394 Msa0046450:intron 30.0%
! ATGATGGAAGGAAACTAAAA+GGG - chr1_1:78603401-78603420 Msa0046450:intron 30.0%
AAGAAGAAGAGAAGCAATAA+TGG - chr1_1:78603597-78603616 Msa0046450:intron 30.0%
!!! TTTTTTTATAGGTCTGAGTG+AGG - chr1_1:78603691-78603710 Msa0046450:intron 30.0%
! TGTCTTGATTTTCACAACTT+TGG - chr1_1:78603782-78603801 Msa0046450:intron 30.0%
! ATATTTTACGGGTAACCTAT+GGG + chr1_1:78603888-78603907 None:intergenic 30.0%
! TAGCAGAGATCATATTTTAC+GGG + chr1_1:78603899-78603918 None:intergenic 30.0%
AAAGAGACAATAATTGTGAG+AGG + chr1_1:78604079-78604098 None:intergenic 30.0%
AGTTAGTGAAGTAGTTAAGT+TGG + chr1_1:78604201-78604220 None:intergenic 30.0%
CTCACAATATTAGTCGTTTA+AGG + chr1_1:78604312-78604331 None:intergenic 30.0%
AAACGACTAATATTGTGAGA+CGG - chr1_1:78604313-78604332 Msa0046450:intron 30.0%
ACTATTATTAGACAAGGACA+TGG - chr1_1:78604599-78604618 Msa0046450:intron 30.0%
!! GACATTTCTAAAGCAATTGA+TGG - chr1_1:78604633-78604652 Msa0046450:intron 30.0%
GACATTGTTCTGATTATAGA+TGG - chr1_1:78604988-78605007 Msa0046450:intron 30.0%
ATATACCAGAGCATGTTTAA+TGG + chr1_1:78605091-78605110 None:intergenic 30.0%
AATAAAGGCTACTTATCTTG+GGG + chr1_1:78605131-78605150 None:intergenic 30.0%
CAATAAAGGCTACTTATCTT+GGG + chr1_1:78605132-78605151 None:intergenic 30.0%
ACAATAAAGGCTACTTATCT+TGG + chr1_1:78605133-78605152 None:intergenic 30.0%
AAAGTCGTCTACTACAATAA+AGG + chr1_1:78605146-78605165 None:intergenic 30.0%
TTAAGTTTCTTACAAACACG+TGG + chr1_1:78605479-78605498 None:intergenic 30.0%
!! TGTTTTTATGCATACTGTGT+TGG - chr1_1:78605518-78605537 Msa0046450:intron 30.0%
!! CTACACCATAACTATTTTGA+TGG + chr1_1:78605554-78605573 None:intergenic 30.0%
!!! TGGTGTAGTTTTGATGTTTT+TGG - chr1_1:78605566-78605585 Msa0046450:intron 30.0%
!!! GTAGTTTTGATGTTTTTGGA+AGG - chr1_1:78605570-78605589 Msa0046450:intron 30.0%
! AGTATCAAACAGCATCATTT+TGG + chr1_1:78605680-78605699 None:intergenic 30.0%
TTGTCAGATCATTGAACTTA+GGG + chr1_1:78605708-78605727 None:intergenic 30.0%
AATATGATGTGGGAAATCTT+TGG - chr1_1:78605797-78605816 Msa0046450:intron 30.0%
ATATGATGTGGGAAATCTTT+GGG - chr1_1:78605798-78605817 Msa0046450:intron 30.0%
CATATTCCTGTTGAAATTGT+TGG - chr1_1:78605826-78605845 Msa0046450:intron 30.0%
AATATGATGTGGGAAATCTT+TGG - chr1_1:78605797-78605816 Msa0046450:intron 30.0%
ATATGATGTGGGAAATCTTT+GGG - chr1_1:78605798-78605817 Msa0046450:intron 30.0%
CATATTCCTGTTGAAATTGT+TGG - chr1_1:78605826-78605845 Msa0046450:intron 30.0%
AGAATATAAACCCATGAAAC+GGG + chr1_1:78606008-78606027 None:intergenic 30.0%
TTATTGTTACATCTCTGATG+TGG - chr1_1:78606265-78606284 Msa0046450:intron 30.0%
TTCTGTACTTAAAGCTTGAA+AGG + chr1_1:78606380-78606399 None:intergenic 30.0%
AGACATACCAACATATTATC+AGG + chr1_1:78606573-78606592 None:intergenic 30.0%
!! TTCATTTTTACCAGCAAACA+TGG + chr1_1:78606745-78606764 None:intergenic 30.0%
GAACAGTACTTACTTATTTC+AGG + chr1_1:78606804-78606823 None:intergenic 30.0%
AGTTACTTACTGTTACTATC+TGG - chr1_1:78606864-78606883 Msa0046450:intron 30.0%
GTTACTTACTGTTACTATCT+GGG - chr1_1:78606865-78606884 Msa0046450:intron 30.0%
ATGATCATCCATTGGATATT+TGG - chr1_1:78606924-78606943 Msa0046450:intron 30.0%
TGTTTGTATGAACTGTATAC+AGG - chr1_1:78606959-78606978 Msa0046450:intron 30.0%
GTTTGTATGAACTGTATACA+GGG - chr1_1:78606960-78606979 Msa0046450:intron 30.0%
! TGCACCTTCAATTGAAATTT+TGG - chr1_1:78607226-78607245 Msa0046450:intron 30.0%
TTATTTCGTAGACCATAAAG+CGG - chr1_1:78607502-78607521 Msa0046450:CDS 30.0%
AACATAAAGCCGAAAGATAT+TGG - chr1_1:78607534-78607553 Msa0046450:CDS 30.0%
ACGATTGTTCCAATATCTTT+CGG + chr1_1:78607546-78607565 None:intergenic 30.0%
! TAAAATTTTCGTCTTGGATC+CGG - chr1_1:78607623-78607642 Msa0046450:intron 30.0%
!!! TCACACTTTTTAACTTCAAC+AGG + chr1_1:78607843-78607862 None:intergenic 30.0%
AGAACTCAAGTTACATGAAA+TGG + chr1_1:78608176-78608195 None:intergenic 30.0%
ATTTCATGTAACTTGAGTTC+TGG - chr1_1:78608175-78608194 Msa0046450:five_prime_UTR 30.0%
!! GGTATCTTGGTTTGTTTATT+AGG - chr1_1:78608286-78608305 Msa0046450:five_prime_UTR 30.0%
ACATACAGTAGCTATTGTAT+AGG + chr1_1:78608370-78608389 None:intergenic 30.0%
ATGAATATGCTTCAAGAACA+CGG + chr1_1:78608848-78608867 None:intergenic 30.0%
CTTGAAGCATATTCATATCT+CGG - chr1_1:78608852-78608871 Msa0046450:intron 30.0%
AATATACTTACAGAAACTGC+AGG + chr1_1:78609000-78609019 None:intergenic 30.0%
GACAAAAATGAGAAAGGAAA+TGG + chr1_1:78609028-78609047 None:intergenic 30.0%
CTGTATTATGATATCATCGT+AGG + chr1_1:78609088-78609107 None:intergenic 30.0%
AGAGTTATCATTTCTGTTTG+TGG - chr1_1:78609106-78609125 Msa0046450:intron 30.0%
TTATCATTTCTGTTTGTGGA+TGG - chr1_1:78609110-78609129 Msa0046450:intron 30.0%
CATATCAAGATATACAACCA+AGG + chr1_1:78609491-78609510 None:intergenic 30.0%
TATATCTTGATATGCAGTCT+TGG - chr1_1:78609497-78609516 Msa0046450:intron 30.0%
ATATCTTGATATGCAGTCTT+GGG - chr1_1:78609498-78609517 Msa0046450:intron 30.0%
TATATAGTCTAGAAGTAGTG+AGG - chr1_1:78609548-78609567 Msa0046450:five_prime_UTR 30.0%
AGAACATGGTTATTTGATGA+TGG - chr1_1:78609581-78609600 Msa0046450:five_prime_UTR 30.0%
! GAACATGGTTATTTGATGAT+GGG - chr1_1:78609582-78609601 Msa0046450:five_prime_UTR 30.0%
CAAGGTTGTTGTATCTATAA+CGG + chr1_1:78609608-78609627 None:intergenic 30.0%
!! AAATAGAAGTTGATGGTAGA+AGG + chr1_1:78609690-78609709 None:intergenic 30.0%
AGTTCCTAAAATTCAACCTT+GGG + chr1_1:78609810-78609829 None:intergenic 30.0%
! TTTAGGAACTGGTTTCTAAT+AGG - chr1_1:78609820-78609839 Msa0046450:five_prime_UTR 30.0%
! TTAGGAACTGGTTTCTAATA+GGG - chr1_1:78609821-78609840 Msa0046450:five_prime_UTR 30.0%
ACTAAAAGAGAGAGAATTGT+TGG - chr1_1:78609875-78609894 Msa0046450:intron 30.0%
! ATTTTCTCGTAACTGTTTTC+GGG + chr1_1:78609945-78609964 None:intergenic 30.0%
! CATTTTCTCGTAACTGTTTT+CGG + chr1_1:78609946-78609965 None:intergenic 30.0%
!! TTAGTTCTGCATACTGATTA+GGG + chr1_1:78609991-78610010 None:intergenic 30.0%
!! TTTAGTTCTGCATACTGATT+AGG + chr1_1:78609992-78610011 None:intergenic 30.0%
ATTGTTGTAGGTCATTAATG+TGG - chr1_1:78610122-78610141 Msa0046450:five_prime_UTR 30.0%
! CATTTGTTACCTACTGAAAT+TGG + chr1_1:78610160-78610179 None:intergenic 30.0%
! AATTCTAAGAGGAAACTCAA+GGG + chr1_1:78610276-78610295 None:intergenic 30.0%
CTACAAACTTTCATGATCAT+TGG + chr1_1:78610625-78610644 None:intergenic 30.0%
CAATGATCATGAAAGTTTGT+AGG - chr1_1:78610623-78610642 Msa0046450:intron 30.0%
ATCATGAAAGTTTGTAGGAT+TGG - chr1_1:78610628-78610647 Msa0046450:intron 30.0%
ATCATGAAAGTTTGTAGGAT+TGG - chr1_1:78610628-78610647 Msa0046450:intron 30.0%
CTTTGTTAAATTGTGTGATC+CGG - chr1_1:78610876-78610895 Msa0046450:intron 30.0%
AGTTAACCTAGTGAAATAGT+CGG - chr1_1:78610931-78610950 Msa0046450:intron 30.0%
! TTGATTGATGCATTTTTCTG+AGG - chr1_1:78611068-78611087 Msa0046450:intron 30.0%
TACTATACCATGAAATCCAA+AGG + chr1_1:78611245-78611264 None:intergenic 30.0%
AAAGAATGCAGAATAATGCA+TGG + chr1_1:78611350-78611369 None:intergenic 30.0%
GCATTATTCTGCATTCTTTA+TGG - chr1_1:78611351-78611370 Msa0046450:intron 30.0%
!! GTGGTTTTACTTGATAAATC+TGG + chr1_1:78611485-78611504 None:intergenic 30.0%
ATGAGGACTAAAAATGCTAA+TGG - chr1_1:78611699-78611718 Msa0046450:intron 30.0%
CTGTGAAATATTAATCAGGA+TGG + chr1_1:78611853-78611872 None:intergenic 30.0%
AGTCGGATTATTGTTTATTG+TGG + chr1_1:78612374-78612393 None:intergenic 30.0%
ACAATAAACAATAATCCGAC+TGG - chr1_1:78612373-78612392 Msa0046450:intron 30.0%
TATCTTTACCAACCTATTCT+TGG - chr1_1:78612428-78612447 Msa0046450:intron 30.0%
!! ATTTTAGTCCAAGAATAGGT+TGG + chr1_1:78612439-78612458 None:intergenic 30.0%
!! CACAATTTTAGTCCAAGAAT+AGG + chr1_1:78612443-78612462 None:intergenic 30.0%
!!! AATCTCATTTTGACTTCTCA+AGG + chr1_1:78612556-78612575 None:intergenic 30.0%
GTTGCTTATGAAGCATAATA+TGG - chr1_1:78612578-78612597 Msa0046450:intron 30.0%
! AAACAAGTACTTTTCCAAAC+AGG + chr1_1:78612717-78612736 None:intergenic 30.0%
!! TGTTTGGAAAAGTACTTGTT+TGG - chr1_1:78612716-78612735 Msa0046450:intron 30.0%
GATATACTCGCAAGTATTTA+CGG + chr1_1:78612899-78612918 None:intergenic 30.0%
!! TTTCTAAGTATTGGTTAAGC+AGG + chr1_1:78612937-78612956 None:intergenic 30.0%
GATGCAGATACGTATATATT+AGG - chr1_1:78612962-78612981 Msa0046450:five_prime_UTR 30.0%
AAGTGAGATGGAAAACATTT+GGG + chr1_1:78613047-78613066 None:intergenic 30.0%
AAAGTGAGATGGAAAACATT+TGG + chr1_1:78613048-78613067 None:intergenic 30.0%
! AATGTTTTCCATCTCACTTT+TGG - chr1_1:78613048-78613067 Msa0046450:five_prime_UTR 30.0%
TAATGTTGTGATTAGGTCTA+AGG - chr1_1:78613689-78613708 Msa0046450:five_prime_UTR 30.0%
!!! GGCATTTTTTTTGTTACACA+AGG - chr1_1:78613899-78613918 Msa0046450:five_prime_UTR 30.0%
GAAAATACACATAGATAGGA+AGG - chr1_1:78613974-78613993 Msa0046450:five_prime_UTR 30.0%
AAGAAATAGAGGAAATAGGA+GGG - chr1_1:78614024-78614043 Msa0046450:five_prime_UTR 30.0%
CTTAAAAATTGTATTGGAGG+AGG - chr1_1:78614105-78614124 Msa0046450:five_prime_UTR 30.0%
!! GGAATTTTGAAGGGTTTATA+TGG - chr1_1:78614135-78614154 Msa0046450:five_prime_UTR 30.0%
AATAGTATATTAGGGGCAAA+CGG + chr1_1:78614355-78614374 None:intergenic 30.0%
!! TTCGGTTTAATTTGGGAAAT+TGG - chr1_1:78614917-78614936 Msa0046450:five_prime_UTR 30.0%
CTCTCAAACTAAAATTTCAG+AGG + chr1_1:78615110-78615129 None:intergenic 30.0%
GCTGAATTTAAAGGGAAAAA+AGG + chr1_1:78615194-78615213 None:intergenic 30.0%
TGATATATCTTTCGTCTATG+TGG - chr1_1:78615300-78615319 Msa0046450:five_prime_UTR 30.0%
CAAATGTTGATCGAATACAA+GGG - chr1_1:78615457-78615476 Msa0046450:five_prime_UTR 30.0%
AAATGTTGATCGAATACAAG+GGG - chr1_1:78615458-78615477 Msa0046450:five_prime_UTR 30.0%
!!! GTTTTTGCCTGATTTTTAGT+TGG + chr1_1:78615507-78615526 None:intergenic 30.0%
!! AGGGTTTGTTTAGGTTTTTG+CGG + chr1_1:78600890-78600909 None:intergenic 35.0%
! ATTAGGGTTAGGGTTTGTTT+AGG + chr1_1:78600899-78600918 None:intergenic 35.0%
ATTGATCTTCACCGAATCAA+CGG + chr1_1:78601087-78601106 None:intergenic 35.0%
TCAATTGGATCGTATCATAC+CGG + chr1_1:78601206-78601225 None:intergenic 35.0%
! TGCTACATGTGTTTTCTGTT+TGG - chr1_1:78601274-78601293 Msa0046450:intron 35.0%
AATAGCAGAGACTAAATTGG+CGG - chr1_1:78601538-78601557 Msa0046450:intron 35.0%
CATATCTATGAAACACTGAC+AGG + chr1_1:78601928-78601947 None:intergenic 35.0%
GACATGAAAGAAATCTCTCT+AGG - chr1_1:78601976-78601995 Msa0046450:intron 35.0%
!! ATTAATTCTTTATGGTGGGC+AGG - chr1_1:78602154-78602173 Msa0046450:intron 35.0%
!! TTAATTCTTTATGGTGGGCA+GGG - chr1_1:78602155-78602174 Msa0046450:intron 35.0%
! TCAGTTTCTGAACTTTTAGC+AGG + chr1_1:78602185-78602204 None:intergenic 35.0%
ACACTTCTGATGAAGAAGAT+GGG - chr1_1:78602240-78602259 Msa0046450:intron 35.0%
AGAAGTCGATCAAGATCAAT+TGG - chr1_1:78602593-78602612 Msa0046450:intron 35.0%
CAAGATCAATTGGTCATACA+AGG - chr1_1:78602603-78602622 Msa0046450:intron 35.0%
ACAAGGATATGGATAAGGAT+AGG - chr1_1:78602864-78602883 Msa0046450:intron 35.0%
ATATGGATAAGGATAGGAGT+CGG - chr1_1:78602870-78602889 Msa0046450:intron 35.0%
AGATGAAACAAGCAGGAATA+AGG - chr1_1:78602934-78602953 Msa0046450:intron 35.0%
GAAGAGAAATGGAAAGAGAT+AGG - chr1_1:78603068-78603087 Msa0046450:intron 35.0%
ACACAAATTATGAGAGGGAT+AGG - chr1_1:78603098-78603117 Msa0046450:intron 35.0%
AAACTGAAAGAGATATGAGC+AGG - chr1_1:78603128-78603147 Msa0046450:intron 35.0%
AACTGAAAGAGATATGAGCA+GGG - chr1_1:78603129-78603148 Msa0046450:intron 35.0%
AGTTTCTCTTTCTATCTGCA+TGG + chr1_1:78603369-78603388 None:intergenic 35.0%
AACTATACCATGGAAGATGA+TGG - chr1_1:78603385-78603404 Msa0046450:intron 35.0%
!! GATGATGGAAGGAAACTAAA+AGG - chr1_1:78603400-78603419 Msa0046450:intron 35.0%
TACATTGGAATTACCTGATC+AGG - chr1_1:78603537-78603556 Msa0046450:intron 35.0%
AGATCTGATCAGAATCAAAG+AGG - chr1_1:78603567-78603586 Msa0046450:intron 35.0%
CCTTCATGTAAACTGATACA+TGG + chr1_1:78603836-78603855 None:intergenic 35.0%
CCATGTATCAGTTTACATGA+AGG - chr1_1:78603833-78603852 Msa0046450:intron 35.0%
! TATTTTACGGGTAACCTATG+GGG + chr1_1:78603887-78603906 None:intergenic 35.0%
! CATATTTTACGGGTAACCTA+TGG + chr1_1:78603889-78603908 None:intergenic 35.0%
TGTTTGGTCTGTGCTTAAAT+AGG - chr1_1:78604034-78604053 Msa0046450:intron 35.0%
AGGTTTGTGCACGATTATTA+AGG + chr1_1:78604292-78604311 None:intergenic 35.0%
TGGGCAAAAAATCAAAGACT+CGG + chr1_1:78604538-78604557 None:intergenic 35.0%
! TGGAACCATCATTTTCTGTT+GGG - chr1_1:78604670-78604689 Msa0046450:intron 35.0%
GATTTCCCAACAGAAAATGA+TGG + chr1_1:78604678-78604697 None:intergenic 35.0%
CGGATGAGAAAACTAAAATG+GGG + chr1_1:78605062-78605081 None:intergenic 35.0%
GCGGATGAGAAAACTAAAAT+GGG + chr1_1:78605063-78605082 None:intergenic 35.0%
ATAAAGGCTACTTATCTTGG+GGG + chr1_1:78605130-78605149 None:intergenic 35.0%
TCTATTCAGGGAAAAGAAGA+TGG - chr1_1:78605312-78605331 Msa0046450:intron 35.0%
CTATTCAGGGAAAAGAAGAT+GGG - chr1_1:78605313-78605332 Msa0046450:intron 35.0%
TTCATTTGACTATAGCTAGC+TGG - chr1_1:78605402-78605421 Msa0046450:intron 35.0%
CTTGTCAGATCATTGAACTT+AGG + chr1_1:78605709-78605728 None:intergenic 35.0%
ACAACCTGTCAATATGATGT+GGG - chr1_1:78605787-78605806 Msa0046450:intron 35.0%
ATTTCCCACATCATATTGAC+AGG + chr1_1:78605794-78605813 None:intergenic 35.0%
TATGATGTGGGAAATCTTTG+GGG - chr1_1:78605799-78605818 Msa0046450:intron 35.0%
AACTGACCAACAATTTCAAC+AGG + chr1_1:78605835-78605854 None:intergenic 35.0%
! ATGTCTGTTTTCCCATTTCA+TGG - chr1_1:78605877-78605896 Msa0046450:intron 35.0%
! TGTCTGTTTTCCCATTTCAT+GGG - chr1_1:78605878-78605897 Msa0046450:intron 35.0%
TATGATGTGGGAAATCTTTG+GGG - chr1_1:78605799-78605818 Msa0046450:intron 35.0%
AACTGACCAACAATTTCAAC+AGG + chr1_1:78605835-78605854 None:intergenic 35.0%
!! CGTTTTGGTGAAATACTTGA+TGG - chr1_1:78606048-78606067 Msa0046450:intron 35.0%
AGGAATCTAAAAGCTGGTAA+TGG - chr1_1:78606129-78606148 Msa0046450:intron 35.0%
AAGGATTGATTAAGGATAGC+CGG + chr1_1:78606219-78606238 None:intergenic 35.0%
TTACATCTCTGATGTGGAAT+AGG - chr1_1:78606271-78606290 Msa0046450:intron 35.0%
ACACAATGACGTTTATCATC+CGG + chr1_1:78606351-78606370 None:intergenic 35.0%
TCTAAATATGAATCTGCGTG+AGG - chr1_1:78606425-78606444 Msa0046450:CDS 35.0%
!!! CGTGAGGTTTTAAAGAAGTT+CGG - chr1_1:78606441-78606460 Msa0046450:intron 35.0%
!!! GTTTTGAAGCTTTGTGACTT+TGG - chr1_1:78606714-78606733 Msa0046450:intron 35.0%
TAAAAGCGACTCACAAGATA+TGG + chr1_1:78606774-78606793 None:intergenic 35.0%
GAATCTTTCTTTGCAGTTCT+TGG - chr1_1:78606893-78606912 Msa0046450:intron 35.0%
TCACAAACAATGACATGTTG+CGG - chr1_1:78607002-78607021 Msa0046450:intron 35.0%
AGCAACAGTCAAAAAATGAC+AGG + chr1_1:78607173-78607192 None:intergenic 35.0%
! CATCTTGTTTATGTTACTCC+TGG - chr1_1:78607275-78607294 Msa0046450:intron 35.0%
TGGCATGAAAACTTAAGTCT+TGG + chr1_1:78607330-78607349 None:intergenic 35.0%
AGAGGATCCTGTAACAAAAA+AGG - chr1_1:78607354-78607373 Msa0046450:intron 35.0%
!!! TAGCTCACCTTTTTTGTTAC+AGG + chr1_1:78607364-78607383 None:intergenic 35.0%
GTTAAGAATCATCCGCTTTA+TGG + chr1_1:78607517-78607536 None:intergenic 35.0%
! AAAAAGTGTGATGTCCCTAA+AGG - chr1_1:78607852-78607871 Msa0046450:five_prime_UTR 35.0%
! CCTTTTATGCATCTAAGCAT+GGG + chr1_1:78608254-78608273 None:intergenic 35.0%
! TCCTTTTATGCATCTAAGCA+TGG + chr1_1:78608255-78608274 None:intergenic 35.0%
AATAGCTACTGTATGTGTGA+TGG - chr1_1:78608374-78608393 Msa0046450:intron 35.0%
TCATCAAAACAGTGGCAATT+AGG + chr1_1:78608589-78608608 None:intergenic 35.0%
! CTGACTTTTCATCAAAACAG+TGG + chr1_1:78608597-78608616 None:intergenic 35.0%
TAAGGCAAAAGAAAGAAGTG+TGG + chr1_1:78608653-78608672 None:intergenic 35.0%
ATGCATTTCTACTGGATGTT+TGG - chr1_1:78608822-78608841 Msa0046450:intron 35.0%
!!! TTTTTGTTTTATTGGGCTCG+TGG - chr1_1:78608888-78608907 Msa0046450:intron 35.0%
GTCAGTATTAATGCCTTTGA+TGG - chr1_1:78609045-78609064 Msa0046450:five_prime_UTR 35.0%
ATGATATCATCGTAGGAAAC+TGG + chr1_1:78609081-78609100 None:intergenic 35.0%
GAAAACACTGTAGGAAACTA+TGG + chr1_1:78609161-78609180 None:intergenic 35.0%
TCGATCATTGAAAACACTGT+AGG + chr1_1:78609170-78609189 None:intergenic 35.0%
CTATGCTATAGTAGGAAGAA+GGG + chr1_1:78609198-78609217 None:intergenic 35.0%
TCTAGATCCTATGCTATAGT+AGG + chr1_1:78609206-78609225 None:intergenic 35.0%
AAGTTTGTCTGGACTAACTA+GGG + chr1_1:78609302-78609321 None:intergenic 35.0%
AAAGTTTGTCTGGACTAACT+AGG + chr1_1:78609303-78609322 None:intergenic 35.0%
! AGTTAGTCCAGACAAACTTT+TGG - chr1_1:78609303-78609322 Msa0046450:intron 35.0%
AACACAAGTCCATTGTTCAT+CGG - chr1_1:78609331-78609350 Msa0046450:intron 35.0%
TTATAGTGTTGCATTTGCCT+TGG - chr1_1:78609471-78609490 Msa0046450:intron 35.0%
CAAATAACCAAGTGGTTACA+AGG + chr1_1:78609626-78609645 None:intergenic 35.0%
GGAAACGAAATAGAAGTTGA+TGG + chr1_1:78609697-78609716 None:intergenic 35.0%
GTTCCTAAAATTCAACCTTG+GGG + chr1_1:78609809-78609828 None:intergenic 35.0%
CAGTTCCTAAAATTCAACCT+TGG + chr1_1:78609811-78609830 None:intergenic 35.0%
!! CAAGGTTGAATTTTAGGAAC+TGG - chr1_1:78609809-78609828 Msa0046450:five_prime_UTR 35.0%
! TAGGAACTGGTTTCTAATAG+GGG - chr1_1:78609822-78609841 Msa0046450:five_prime_UTR 35.0%
! GTTTCCTATTGCTACTTAAG+AGG + chr1_1:78609854-78609873 None:intergenic 35.0%
! GATTAGGGGATTAGTAGAAT+TGG + chr1_1:78609976-78609995 None:intergenic 35.0%
! TAGTTCTGCATACTGATTAG+GGG + chr1_1:78609990-78610009 None:intergenic 35.0%
GCAGAACTAAATTAGTAGAG+TGG - chr1_1:78610001-78610020 Msa0046450:five_prime_UTR 35.0%
!! AATGACTTAAAGTGCCGTAA+TGG - chr1_1:78610242-78610261 Msa0046450:five_prime_UTR 35.0%
! ATTCTAAGAGGAAACTCAAG+GGG + chr1_1:78610275-78610294 None:intergenic 35.0%
! CAATTCTAAGAGGAAACTCA+AGG + chr1_1:78610277-78610296 None:intergenic 35.0%
AAAGGTCAGACAATTCTAAG+AGG + chr1_1:78610287-78610306 None:intergenic 35.0%
TAGTGAATTATGCCATGACT+CGG + chr1_1:78610334-78610353 None:intergenic 35.0%
ATGGCATAATTCACTACGTA+CGG - chr1_1:78610338-78610357 Msa0046450:intron 35.0%
!!! GGTGTTGTAAGTGCTATTTT+TGG - chr1_1:78610359-78610378 Msa0046450:intron 35.0%
TATTCCCTTGGGTCATATTA+TGG - chr1_1:78610401-78610420 Msa0046450:five_prime_UTR 35.0%
ATTCCCTTGGGTCATATTAT+GGG - chr1_1:78610402-78610421 Msa0046450:five_prime_UTR 35.0%
CTACAAACTTTCGTGATCAT+TGG + chr1_1:78610485-78610504 None:intergenic 35.0%
CAATGATCACGAAAGTTTGT+AGG - chr1_1:78610483-78610502 Msa0046450:five_prime_UTR 35.0%
ATCACGAAAGTTTGTAGGAT+TGG - chr1_1:78610488-78610507 Msa0046450:five_prime_UTR 35.0%
CTACAAACTTTCATGATCAC+TGG + chr1_1:78610765-78610784 None:intergenic 35.0%
CAGTGATCATGAAAGTTTGT+AGG - chr1_1:78610763-78610782 Msa0046450:intron 35.0%
TTAAATTGTGTGATCCGGTT+CGG - chr1_1:78610881-78610900 Msa0046450:intron 35.0%
GTGAATTTCCAGAACATACA+AGG + chr1_1:78610908-78610927 None:intergenic 35.0%
GTTAACCTAGTGAAATAGTC+GGG - chr1_1:78610932-78610951 Msa0046450:intron 35.0%
! ATATTTCTGAACACACCCAA+TGG - chr1_1:78610977-78610996 Msa0046450:intron 35.0%
TGCTTAAGGAAAATGTCACT+GGG + chr1_1:78611614-78611633 None:intergenic 35.0%
ATGCTTAAGGAAAATGTCAC+TGG + chr1_1:78611615-78611634 None:intergenic 35.0%
!! TGTTGATGGAAGTTTTTGAC+AGG - chr1_1:78611650-78611669 Msa0046450:five_prime_UTR 35.0%
!! GTTGATGGAAGTTTTTGACA+GGG - chr1_1:78611651-78611670 Msa0046450:five_prime_UTR 35.0%
GGCAAGATAATGTTCTAACA+TGG + chr1_1:78611832-78611851 None:intergenic 35.0%
ACATTATTCACAAGTACCTC+CGG + chr1_1:78612017-78612036 None:intergenic 35.0%
AGCTGAAATGAATTTAGTCC+AGG + chr1_1:78612277-78612296 None:intergenic 35.0%
! AACTTGTTTATACACCGTGT+TGG + chr1_1:78612630-78612649 None:intergenic 35.0%
GTGAAAAAAACCGTATCCAT+TGG - chr1_1:78612689-78612708 Msa0046450:intron 35.0%
CAAGTATTTACGGATTTCCA+TGG + chr1_1:78612889-78612908 None:intergenic 35.0%
CTGGGAAAATACACATAGAT+AGG - chr1_1:78613970-78613989 Msa0046450:five_prime_UTR 35.0%
TACACATAGATAGGAAGGTT+TGG - chr1_1:78613979-78613998 Msa0046450:five_prime_UTR 35.0%
ACACATAGATAGGAAGGTTT+GGG - chr1_1:78613980-78613999 Msa0046450:five_prime_UTR 35.0%
GTGGAAGAAATAGAGGAAAT+AGG - chr1_1:78614020-78614039 Msa0046450:five_prime_UTR 35.0%
GAAGAAATAGAGGAAATAGG+AGG - chr1_1:78614023-78614042 Msa0046450:five_prime_UTR 35.0%
AGAAATAGAGGAAATAGGAG+GGG - chr1_1:78614025-78614044 Msa0046450:five_prime_UTR 35.0%
! AAATAGGAGGGGAAGATTTT+GGG - chr1_1:78614036-78614055 Msa0046450:five_prime_UTR 35.0%
GATACTAAACCCTTCTGATT+TGG - chr1_1:78614077-78614096 Msa0046450:five_prime_UTR 35.0%
TAAGTTCCTCCAAATCAGAA+GGG + chr1_1:78614089-78614108 None:intergenic 35.0%
TTAAGTTCCTCCAAATCAGA+AGG + chr1_1:78614090-78614109 None:intergenic 35.0%
! AATTTGTTTGCGAGTTTGGA+GGG + chr1_1:78614308-78614327 None:intergenic 35.0%
! TCAGAATTTGTTTGCGAGTT+TGG + chr1_1:78614312-78614331 None:intergenic 35.0%
GACGATGCATAAAATATGCA+AGG - chr1_1:78614412-78614431 Msa0046450:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr1_1:78614417-78614436 Msa0046450:intron 35.0%
!!! ATTTTTTTTTTGTGGTGGCC+CGG + chr1_1:78614452-78614471 None:intergenic 35.0%
!! TTAGAAAAGAGGCATTTGTG+AGG + chr1_1:78614651-78614670 None:intergenic 35.0%
TCTATAAAGGATTCACCAAG+TGG - chr1_1:78614678-78614697 Msa0046450:five_prime_UTR 35.0%
AAAAACAATAGAGAGCCACT+TGG + chr1_1:78614696-78614715 None:intergenic 35.0%
TGGGAAATTGGAGTAATGAA+AGG - chr1_1:78614929-78614948 Msa0046450:five_prime_UTR 35.0%
TGTACAACCTTTGTGCATAT+AGG - chr1_1:78615084-78615103 Msa0046450:five_prime_UTR 35.0%
! CTGCACTTGCTGAATTTAAA+GGG + chr1_1:78615202-78615221 None:intergenic 35.0%
CATCACATAAAGTGCATGAA+AGG - chr1_1:78615409-78615428 Msa0046450:five_prime_UTR 35.0%
GCAAATGTTGATCGAATACA+AGG - chr1_1:78615456-78615475 Msa0046450:five_prime_UTR 35.0%
!!! TTTTTAGTTGGTCGTCTGAT+CGG + chr1_1:78615495-78615514 None:intergenic 35.0%
CTCACTAGAAACAACTTTCA+AGG - chr1_1:78615597-78615616 Msa0046450:five_prime_UTR 35.0%
GCCAACACAATTAGAGAAAT+CGG - chr1_1:78615751-78615770 Msa0046450:five_prime_UTR 35.0%
TCCGATTTCTCTAATTGTGT+TGG + chr1_1:78615755-78615774 None:intergenic 35.0%
! AAACAGCGAACGGTTAGTTA+TGG + chr1_1:78600829-78600848 None:intergenic 40.0%
TTGGTTGCTGAGAAAAACAG+AGG - chr1_1:78601293-78601312 Msa0046450:intron 40.0%
ATAGCAGAGACTAAATTGGC+GGG - chr1_1:78601539-78601558 Msa0046450:intron 40.0%
AGGAATCACTGTGTTCTGTT+TGG + chr1_1:78601851-78601870 None:intergenic 40.0%
AAGTTCAGAAACTGAACGTG+AGG - chr1_1:78602190-78602209 Msa0046450:intron 40.0%
AGTTCAGAAACTGAACGTGA+GGG - chr1_1:78602191-78602210 Msa0046450:intron 40.0%
CACACTTCTGATGAAGAAGA+TGG - chr1_1:78602239-78602258 Msa0046450:intron 40.0%
GTTTCAGCTCTTGAGATGTA+TGG + chr1_1:78602320-78602339 None:intergenic 40.0%
CAAGAGCTGAAACTCAAACT+AGG - chr1_1:78602327-78602346 Msa0046450:intron 40.0%
AGCTGAAACTCAAACTAGGA+GGG - chr1_1:78602331-78602350 Msa0046450:intron 40.0%
TTGGGTGTTAAGTCTTCCAA+AGG - chr1_1:78602392-78602411 Msa0046450:intron 40.0%
TGGGTGTTAAGTCTTCCAAA+GGG - chr1_1:78602393-78602412 Msa0046450:intron 40.0%
ATTCTTCCACTTATCCCCTT+TGG + chr1_1:78602411-78602430 None:intergenic 40.0%
AAAGGGGATAAGTGGAAGAA+TGG - chr1_1:78602410-78602429 Msa0046450:intron 40.0%
AAGGGGATAAGTGGAAGAAT+GGG - chr1_1:78602411-78602430 Msa0046450:intron 40.0%
ACTTTCAGAGGAATTCCTGT+GGG + chr1_1:78602522-78602541 None:intergenic 40.0%
!! TTTTTCTTCGCCACTTTCAG+AGG + chr1_1:78602534-78602553 None:intergenic 40.0%
ATAGACGAGAACACAGTTCT+AGG - chr1_1:78602807-78602826 Msa0046450:intron 40.0%
!! ACAGTTCTAGGTATCACAGT+CGG - chr1_1:78602819-78602838 Msa0046450:intron 40.0%
TAAGGACAGGAACAAGGATA+TGG - chr1_1:78602853-78602872 Msa0046450:intron 40.0%
CAGGAACAAGGATATGGATA+AGG - chr1_1:78602859-78602878 Msa0046450:intron 40.0%
TATGGATAAGGATAGGAGTC+GGG - chr1_1:78602871-78602890 Msa0046450:intron 40.0%
ATGTGGATAGAGACTTGCAT+AGG - chr1_1:78602900-78602919 Msa0046450:intron 40.0%
TGTGGATAGAGACTTGCATA+GGG - chr1_1:78602901-78602920 Msa0046450:intron 40.0%
TGAAACAAGCAGGAATAAGG+AGG - chr1_1:78602937-78602956 Msa0046450:intron 40.0%
! CAGGAATAAGGAGGTTGATT+GGG - chr1_1:78602946-78602965 Msa0046450:intron 40.0%
CATAGAAGGGAAAAAGAACG+TGG - chr1_1:78602971-78602990 Msa0046450:intron 40.0%
GAAGGGACATGGTAAAAGAT+AGG - chr1_1:78603014-78603033 Msa0046450:intron 40.0%
ACATGGTAAAAGATAGGAGC+AGG - chr1_1:78603020-78603039 Msa0046450:intron 40.0%
CATGGTAAAAGATAGGAGCA+GGG - chr1_1:78603021-78603040 Msa0046450:intron 40.0%
AAAAGATAGGAGCAGGGAAA+AGG - chr1_1:78603027-78603046 Msa0046450:intron 40.0%
TAGGGATAGGAGAAGAGAAA+TGG - chr1_1:78603057-78603076 Msa0046450:intron 40.0%
AAATGGAAAGAGATAGGAGC+AGG - chr1_1:78603074-78603093 Msa0046450:intron 40.0%
AATGGAAAGAGATAGGAGCA+GGG - chr1_1:78603075-78603094 Msa0046450:intron 40.0%
CAGGGACACAAATTATGAGA+GGG - chr1_1:78603093-78603112 Msa0046450:intron 40.0%
ATTATGAGAGGGATAGGAGA+AGG - chr1_1:78603104-78603123 Msa0046450:intron 40.0%
TTATGAGAGGGATAGGAGAA+GGG - chr1_1:78603105-78603124 Msa0046450:intron 40.0%
ATAGAGACTGGAAGAGTGAA+TGG - chr1_1:78603176-78603195 Msa0046450:intron 40.0%
TAGAGACTGGAAGAGTGAAT+GGG - chr1_1:78603177-78603196 Msa0046450:intron 40.0%
GGAAGAGTGAATGGGATTAT+AGG - chr1_1:78603185-78603204 Msa0046450:intron 40.0%
GTGAATGGGATTATAGGAAC+CGG - chr1_1:78603191-78603210 Msa0046450:intron 40.0%
TGAATGGGATTATAGGAACC+GGG - chr1_1:78603192-78603211 Msa0046450:intron 40.0%
CCTTATTGATATCCCTTTCC+CGG + chr1_1:78603213-78603232 None:intergenic 40.0%
AGAGACGAGATGACAGATAT+CGG - chr1_1:78603233-78603252 Msa0046450:intron 40.0%
!! ATACCATGGAAGATGATGGA+AGG - chr1_1:78603389-78603408 Msa0046450:intron 40.0%
TTTCCTTCCATCATCTTCCA+TGG + chr1_1:78603395-78603414 None:intergenic 40.0%
TGATGTAGACGAGGATACAT+TGG - chr1_1:78603522-78603541 Msa0046450:intron 40.0%
! TTTACATGAAGGTGCGTATG+TGG - chr1_1:78603844-78603863 Msa0046450:intron 40.0%
ATGCCTTCTGCTCTTCTTAA+TGG - chr1_1:78603932-78603951 Msa0046450:intron 40.0%
GACTAATATTGTGAGACGGA+GGG - chr1_1:78604317-78604336 Msa0046450:intron 40.0%
! ACAGCTGGACTAGAGAAATT+TGG - chr1_1:78604361-78604380 Msa0046450:intron 40.0%
! GTGGAACCATCATTTTCTGT+TGG - chr1_1:78604669-78604688 Msa0046450:intron 40.0%
GAAATCTCCACCTGAAAATG+TGG - chr1_1:78604692-78604711 Msa0046450:intron 40.0%
! ATATTTGGTGAGACACCAAC+TGG - chr1_1:78604910-78604929 Msa0046450:intron 40.0%
ACCAACTGGAGTTAGGAAAT+TGG - chr1_1:78604924-78604943 Msa0046450:intron 40.0%
ACCAATTTCCTAACTCCAGT+TGG + chr1_1:78604928-78604947 None:intergenic 40.0%
ATGGGGAAAAACACAGAAGA+CGG + chr1_1:78605045-78605064 None:intergenic 40.0%
GGCGGATGAGAAAACTAAAA+TGG + chr1_1:78605064-78605083 None:intergenic 40.0%
AGCATGTTTAATGGAGAAGG+CGG + chr1_1:78605082-78605101 None:intergenic 40.0%
CAGAGCATGTTTAATGGAGA+AGG + chr1_1:78605085-78605104 None:intergenic 40.0%
CTTCTCCATTAAACATGCTC+TGG - chr1_1:78605083-78605102 Msa0046450:intron 40.0%
! TAGTAGACGACTTTTCCTTG+CGG - chr1_1:78605152-78605171 Msa0046450:intron 40.0%
!! AAGATGGGTTACTGATTGAG+AGG - chr1_1:78605328-78605347 Msa0046450:intron 40.0%
!! AGATGGGTTACTGATTGAGA+GGG - chr1_1:78605329-78605348 Msa0046450:intron 40.0%
TGGCACAAAACTAATAGCTC+TGG + chr1_1:78605459-78605478 None:intergenic 40.0%
! TTATGCATACTGTGTTGGCA+TGG - chr1_1:78605523-78605542 Msa0046450:intron 40.0%
! TATGCATACTGTGTTGGCAT+GGG - chr1_1:78605524-78605543 Msa0046450:intron 40.0%
!!! CTTTTCTGAAGCATTTCCTG+TGG - chr1_1:78605754-78605773 Msa0046450:intron 40.0%
CACATCATATTGACAGGTTG+TGG + chr1_1:78605788-78605807 None:intergenic 40.0%
CACAACCTGTCAATATGATG+TGG - chr1_1:78605786-78605805 Msa0046450:intron 40.0%
! ATGTCTGTTTTCCCGTTTCA+TGG - chr1_1:78605994-78606013 Msa0046450:intron 40.0%
! TGTCTGTTTTCCCGTTTCAT+GGG - chr1_1:78605995-78606014 Msa0046450:intron 40.0%
! TTCAATGCAGGCTATCGTTT+TGG - chr1_1:78606033-78606052 Msa0046450:intron 40.0%
GTGCAGCAGTAACTTCATAT+CGG + chr1_1:78606074-78606093 None:intergenic 40.0%
TATGAAGTTACTGCTGCACA+TGG - chr1_1:78606075-78606094 Msa0046450:intron 40.0%
ATGAAGTTACTGCTGCACAT+GGG - chr1_1:78606076-78606095 Msa0046450:intron 40.0%
TTTCAACAGTTGTACGAGCT+AGG - chr1_1:78606109-78606128 Msa0046450:intron 40.0%
CAATAACGACACTATGTGAG+TGG - chr1_1:78606185-78606204 Msa0046450:intron 40.0%
!!! TATGTGAGTGGTTTTTTCCC+CGG - chr1_1:78606197-78606216 Msa0046450:intron 40.0%
AGGATTGATTAAGGATAGCC+GGG + chr1_1:78606218-78606237 None:intergenic 40.0%
GACACTACCCAAAAGTGAAA+AGG + chr1_1:78606238-78606257 None:intergenic 40.0%
TCTGATGTGGAATAGGTACA+AGG - chr1_1:78606278-78606297 Msa0046450:intron 40.0%
GAAATTAGTAGGTGCAGATC+CGG - chr1_1:78606329-78606348 Msa0046450:intron 40.0%
AAGAAGTTCGGTCGCAATAT+TGG - chr1_1:78606453-78606472 Msa0046450:intron 40.0%
!! TTTGGTAATGCCATGTTTGC+TGG - chr1_1:78606732-78606751 Msa0046450:intron 40.0%
CTTGCAGTATGATCATCCAT+TGG - chr1_1:78606916-78606935 Msa0046450:intron 40.0%
CCTACAGACCAAATATCCAA+TGG + chr1_1:78606935-78606954 None:intergenic 40.0%
CCATTGGATATTTGGTCTGT+AGG - chr1_1:78606932-78606951 Msa0046450:intron 40.0%
GTATGAACTGTATACAGGGA+AGG - chr1_1:78606964-78606983 Msa0046450:intron 40.0%
TCCAAAAAAGATGCTCCGTA+AGG - chr1_1:78607051-78607070 Msa0046450:intron 40.0%
!!! ACCTTACGGAGCATCTTTTT+TGG + chr1_1:78607055-78607074 None:intergenic 40.0%
TTGTTTATGTTACTCCTGGC+AGG - chr1_1:78607279-78607298 Msa0046450:intron 40.0%
TGTTTATGTTACTCCTGGCA+GGG - chr1_1:78607280-78607299 Msa0046450:intron 40.0%
! AAGTTTTCATGCCACTGAAG+AGG - chr1_1:78607336-78607355 Msa0046450:intron 40.0%
GATATTGGAACAATCGTTGC+TGG - chr1_1:78607549-78607568 Msa0046450:CDS 40.0%
! GGAGTCAAGTTTTGCAACAT+TGG + chr1_1:78607705-78607724 None:intergenic 40.0%
CAGTTAAGTGTACGCCTTTA+GGG + chr1_1:78607869-78607888 None:intergenic 40.0%
ATTGTAAGACAACTTGCCGA+TGG - chr1_1:78607917-78607936 Msa0046450:five_prime_UTR 40.0%
GCAGAAAGAAAAACTGCCAT+CGG + chr1_1:78607936-78607955 None:intergenic 40.0%
TTCTCATTCAGGAGACATCA+CGG - chr1_1:78608213-78608232 Msa0046450:five_prime_UTR 40.0%
TTATGCATCTAAGCATGGGA+GGG + chr1_1:78608250-78608269 None:intergenic 40.0%
TTTATGCATCTAAGCATGGG+AGG + chr1_1:78608251-78608270 None:intergenic 40.0%
CCCATGCTTAGATGCATAAA+AGG - chr1_1:78608251-78608270 Msa0046450:five_prime_UTR 40.0%
TAGATGCATAAAAGGAACCC+AGG - chr1_1:78608259-78608278 Msa0046450:five_prime_UTR 40.0%
AAACCAAGATACCTTCTCCT+GGG + chr1_1:78608279-78608298 None:intergenic 40.0%
TGAGGGAAGTCAATAGTTGT+TGG - chr1_1:78608439-78608458 Msa0046450:intron 40.0%
! TTGAACCTGCATTTTCATCC+AGG - chr1_1:78608538-78608557 Msa0046450:intron 40.0%
ATTAGGCATTTGCGTAGTAC+TGG + chr1_1:78608572-78608591 None:intergenic 40.0%
! GAAAGAAGTGTGGAAAACAC+AGG + chr1_1:78608643-78608662 None:intergenic 40.0%
! TGTTGCATTTTATCCATGGC+TGG - chr1_1:78608790-78608809 Msa0046450:intron 40.0%
CATTCTGGATGCATTTCTAC+TGG - chr1_1:78608814-78608833 Msa0046450:intron 40.0%
! TTAATGCCTTTGATGGTCCA+CGG - chr1_1:78609052-78609071 Msa0046450:intron 40.0%
CCTATGCTATAGTAGGAAGA+AGG + chr1_1:78609199-78609218 None:intergenic 40.0%
CCTTCTTCCTACTATAGCAT+AGG - chr1_1:78609196-78609215 Msa0046450:intron 40.0%
!! ATAAAAGGTACCGAAGGAGT+TGG + chr1_1:78609376-78609395 None:intergenic 40.0%
! AACTCCTTCGGTACCTTTTA+TGG - chr1_1:78609375-78609394 Msa0046450:intron 40.0%
CATGCACTATTCAATCGTGA+TGG + chr1_1:78609407-78609426 None:intergenic 40.0%
TAGTCTAGAAGTAGTGAGGA+TGG - chr1_1:78609552-78609571 Msa0046450:five_prime_UTR 40.0%
AGTCTAGAAGTAGTGAGGAT+GGG - chr1_1:78609553-78609572 Msa0046450:five_prime_UTR 40.0%
ACAACAACCTTGTAACCACT+TGG - chr1_1:78609616-78609635 Msa0046450:five_prime_UTR 40.0%
ATTGTACCCTAGAGAGATGA+GGG + chr1_1:78609719-78609738 None:intergenic 40.0%
TATTGTACCCTAGAGAGATG+AGG + chr1_1:78609720-78609739 None:intergenic 40.0%
! AGGTGATAATGTTAGGACCA+GGG + chr1_1:78609767-78609786 None:intergenic 40.0%
! TGTCCCCAAGGTTGAATTTT+AGG - chr1_1:78609803-78609822 Msa0046450:five_prime_UTR 40.0%
GCATCCTCTTAAGTAGCAAT+AGG - chr1_1:78609847-78609866 Msa0046450:five_prime_UTR 40.0%
ATTAGTAGAGTGGTTGCTGT+TGG - chr1_1:78610011-78610030 Msa0046450:five_prime_UTR 40.0%
TCTTTCTTCTCGACATGACT+TGG + chr1_1:78610066-78610085 None:intergenic 40.0%
!! TTAAAGTGCCGTAATGGATG+TGG - chr1_1:78610248-78610267 Msa0046450:five_prime_UTR 40.0%
! TTCTAAGAGGAAACTCAAGG+GGG + chr1_1:78610274-78610293 None:intergenic 40.0%
TTCCCTTGGGTCATATTATG+GGG - chr1_1:78610403-78610422 Msa0046450:five_prime_UTR 40.0%
AACAACCCGACTATTTCACT+AGG + chr1_1:78610940-78610959 None:intergenic 40.0%
GTGTGTTCAGAAATATCTCG+AGG + chr1_1:78610973-78610992 None:intergenic 40.0%
GAAACCTCTTGCTAACCATT+GGG + chr1_1:78610995-78611014 None:intergenic 40.0%
AGAAACCTCTTGCTAACCAT+TGG + chr1_1:78610996-78611015 None:intergenic 40.0%
TATTTATTAGACCGGGCCTT+TGG - chr1_1:78611226-78611245 Msa0046450:five_prime_UTR 40.0%
TTTGGCCCCTAAAATGCTTA+AGG + chr1_1:78611628-78611647 None:intergenic 40.0%
TTAGGGGCCAAAAATGTTGA+TGG - chr1_1:78611636-78611655 Msa0046450:intron 40.0%
CATTATTCACAAGTACCTCC+GGG + chr1_1:78612016-78612035 None:intergenic 40.0%
TACAACAAGCCATGATGTTG+TGG - chr1_1:78612067-78612086 Msa0046450:intron 40.0%
CACTTATCTACACACCAACA+CGG - chr1_1:78612613-78612632 Msa0046450:intron 40.0%
CAAACAGGTACCAATGGATA+CGG + chr1_1:78612702-78612721 None:intergenic 40.0%
! CTTTTCCAAACAGGTACCAA+TGG + chr1_1:78612708-78612727 None:intergenic 40.0%
TCTATTGACGAATGTGCCAT+CGG - chr1_1:78613724-78613743 Msa0046450:five_prime_UTR 40.0%
! TATTTTCCCAGCACGATACA+TGG + chr1_1:78613961-78613980 None:intergenic 40.0%
ATAGGAAGGTTTGGGAGAAA+AGG - chr1_1:78613988-78614007 Msa0046450:five_prime_UTR 40.0%
TGAGCAAGTGGAAGAAATAG+AGG - chr1_1:78614013-78614032 Msa0046450:five_prime_UTR 40.0%
! GAAATAGGAGGGGAAGATTT+TGG - chr1_1:78614035-78614054 Msa0046450:five_prime_UTR 40.0%
! AATAGGAGGGGAAGATTTTG+GGG - chr1_1:78614037-78614056 Msa0046450:five_prime_UTR 40.0%
!! ACTAAACCCTTCTGATTTGG+AGG - chr1_1:78614080-78614099 Msa0046450:five_prime_UTR 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_1:78614112-78614131 Msa0046450:five_prime_UTR 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - chr1_1:78614113-78614132 Msa0046450:five_prime_UTR 40.0%
!!! AGGGTTTTGGGGAATTTTGA+AGG - chr1_1:78614125-78614144 Msa0046450:five_prime_UTR 40.0%
!!! GGGTTTTGGGGAATTTTGAA+GGG - chr1_1:78614126-78614145 Msa0046450:five_prime_UTR 40.0%
ATTTGTTTGCGAGTTTGGAG+GGG + chr1_1:78614307-78614326 None:intergenic 40.0%
! GAATTTGTTTGCGAGTTTGG+AGG + chr1_1:78614309-78614328 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr1_1:78614418-78614437 Msa0046450:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr1_1:78614419-78614438 Msa0046450:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCC+GGG + chr1_1:78614451-78614470 None:intergenic 40.0%
ATGCACAAAGGTTGTACACA+AGG + chr1_1:78615082-78615101 None:intergenic 40.0%
! GCTGCACTTGCTGAATTTAA+AGG + chr1_1:78615203-78615222 None:intergenic 40.0%
TGTATCAAGTATGAACGGGT+AGG + chr1_1:78615261-78615280 None:intergenic 40.0%
! AGGTTTCAAAGGAGTGCAAA+TGG - chr1_1:78615376-78615395 Msa0046450:five_prime_UTR 40.0%
CAGACGACCAACTAAAAATC+AGG - chr1_1:78615497-78615516 Msa0046450:five_prime_UTR 40.0%
GAGGTTCGTTCTGTATTGGA+TGG + chr1_1:78600798-78600817 None:intergenic 45.0%
ACGGTAGAACAAACAGCGAA+CGG + chr1_1:78600839-78600858 None:intergenic 45.0%
AATCGGTGGGCATGATTGAT+TGG + chr1_1:78600929-78600948 None:intergenic 45.0%
! CGTTGCTGAAACCGTTGATT+CGG - chr1_1:78601073-78601092 Msa0046450:CDS 45.0%
GTATCGTCTTTGACCTCGAA+AGG + chr1_1:78601158-78601177 None:intergenic 45.0%
CATGTTTGTGTAGTGCAACC+AGG + chr1_1:78601957-78601976 None:intergenic 45.0%
TAGGCGTTTCAGTGAAGACT+GGG - chr1_1:78601995-78602014 Msa0046450:intron 45.0%
GAGCTGAAACTCAAACTAGG+AGG - chr1_1:78602330-78602349 Msa0046450:intron 45.0%
GGGTGTTAAGTCTTCCAAAG+GGG - chr1_1:78602394-78602413 Msa0046450:intron 45.0%
AGTCTTCCAAAGGGGATAAG+TGG - chr1_1:78602402-78602421 Msa0046450:intron 45.0%
AGGGGATAAGTGGAAGAATG+GGG - chr1_1:78602412-78602431 Msa0046450:intron 45.0%
AAGTGGAAGAATGGGGAGTT+TGG - chr1_1:78602419-78602438 Msa0046450:intron 45.0%
!! GGGGAGTTTGGTCATTTTAG+AGG - chr1_1:78602431-78602450 Msa0046450:intron 45.0%
CTTTCAGAGGAATTCCTGTG+GGG + chr1_1:78602521-78602540 None:intergenic 45.0%
CACTTTCAGAGGAATTCCTG+TGG + chr1_1:78602523-78602542 None:intergenic 45.0%
! CACAGGAATTCCTCTGAAAG+TGG - chr1_1:78602521-78602540 Msa0046450:intron 45.0%
GCGAATTCTCCTTTGCATGA+TGG - chr1_1:78602566-78602585 Msa0046450:intron 45.0%
CTTCTGTGTCCATCATGCAA+AGG + chr1_1:78602578-78602597 None:intergenic 45.0%
CAATTGGTCATACAAGGGAC+AGG - chr1_1:78602609-78602628 Msa0046450:intron 45.0%
! ATAGTCAGTCTTGTGTCTGC+TGG + chr1_1:78602714-78602733 None:intergenic 45.0%
GACTGACTATGACCTTGATG+AGG - chr1_1:78602724-78602743 Msa0046450:intron 45.0%
ACCTTGATGAGGAAACAGTG+AGG - chr1_1:78602735-78602754 Msa0046450:intron 45.0%
CCTTGATGAGGAAACAGTGA+GGG - chr1_1:78602736-78602755 Msa0046450:intron 45.0%
AAACAGTGAGGGAAGGAAGA+AGG - chr1_1:78602747-78602766 Msa0046450:intron 45.0%
AACAGTGAGGGAAGGAAGAA+GGG - chr1_1:78602748-78602767 Msa0046450:intron 45.0%
!! CAGTTCTAGGTATCACAGTC+GGG - chr1_1:78602820-78602839 Msa0046450:intron 45.0%
GCAAGTCTCTATCCACATCT+CGG + chr1_1:78602898-78602917 None:intergenic 45.0%
AGAAGCGAGATGAAACAAGC+AGG - chr1_1:78602927-78602946 Msa0046450:intron 45.0%
! GCAGGAATAAGGAGGTTGAT+TGG - chr1_1:78602945-78602964 Msa0046450:intron 45.0%
! AGGTTGATTGGGTGCATAGA+AGG - chr1_1:78602957-78602976 Msa0046450:intron 45.0%
GGTTGATTGGGTGCATAGAA+GGG - chr1_1:78602958-78602977 Msa0046450:intron 45.0%
GAAGGGAAAAAGAACGTGGA+AGG - chr1_1:78602975-78602994 Msa0046450:intron 45.0%
GAGTCATGACAGGCATAGAA+GGG - chr1_1:78602997-78603016 Msa0046450:intron 45.0%
AAAAGGATGAGGGTAGGGAT+AGG - chr1_1:78603044-78603063 Msa0046450:intron 45.0%
GCAGGGACACAAATTATGAG+AGG - chr1_1:78603092-78603111 Msa0046450:intron 45.0%
ATATGAGCAGGGACAGAACA+AGG - chr1_1:78603140-78603159 Msa0046450:intron 45.0%
TATGAGCAGGGACAGAACAA+GGG - chr1_1:78603141-78603160 Msa0046450:intron 45.0%
GGATTATAGGAACCGGGAAA+GGG - chr1_1:78603198-78603217 Msa0046450:intron 45.0%
CCGGGAAAGGGATATCAATA+AGG - chr1_1:78603210-78603229 Msa0046450:intron 45.0%
AACGATGAAGACGCTCCTAA+TGG - chr1_1:78603259-78603278 Msa0046450:intron 45.0%
TGAAGACGCTCCTAATGGTA+AGG - chr1_1:78603264-78603283 Msa0046450:intron 45.0%
! GTATATTGATTGCAGCAGCG+AGG - chr1_1:78603489-78603508 Msa0046450:intron 45.0%
CGAACAAGATGATGTAGACG+AGG - chr1_1:78603513-78603532 Msa0046450:intron 45.0%
GGAATTACCTGATCAGGAAG+AGG - chr1_1:78603543-78603562 Msa0046450:intron 45.0%
AGATCTTCCTCTTCCTGATC+AGG + chr1_1:78603553-78603572 None:intergenic 45.0%
GAACAAGCAGCTGAAAACGA+AGG - chr1_1:78603649-78603668 Msa0046450:intron 45.0%
GCAGCTGAAAACGAAGGAAA+AGG - chr1_1:78603655-78603674 Msa0046450:intron 45.0%
CCTCCATTAAGAAGAGCAGA+AGG + chr1_1:78603938-78603957 None:intergenic 45.0%
CCTTCTGCTCTTCTTAATGG+AGG - chr1_1:78603935-78603954 Msa0046450:intron 45.0%
TCTGCTCTTCTTAATGGAGG+TGG - chr1_1:78603938-78603957 Msa0046450:intron 45.0%
TAGCCACATCTAGCATGTGA+CGG + chr1_1:78603982-78604001 None:intergenic 45.0%
CGACTAATATTGTGAGACGG+AGG - chr1_1:78604316-78604335 Msa0046450:intron 45.0%
! TGATGGCAAGAGTGATGATG+TGG - chr1_1:78604650-78604669 Msa0046450:intron 45.0%
!! CCAACATCCACATTTTCAGG+TGG + chr1_1:78604702-78604721 None:intergenic 45.0%
CCACCTGAAAATGTGGATGT+TGG - chr1_1:78604699-78604718 Msa0046450:intron 45.0%
! GAGCCAACATCCACATTTTC+AGG + chr1_1:78604705-78604724 None:intergenic 45.0%
CATAACTCTTGCAGAGTGAG+AGG - chr1_1:78604863-78604882 Msa0046450:intron 45.0%
TGGGGAAAAACACAGAAGAC+GGG + chr1_1:78605044-78605063 None:intergenic 45.0%
! AGTAGACGACTTTTCCTTGC+GGG - chr1_1:78605153-78605172 Msa0046450:intron 45.0%
ATAAGTGATAAGAGCCCGCA+AGG + chr1_1:78605170-78605189 None:intergenic 45.0%
CATCATCCCAATTGTCATGC+AGG + chr1_1:78605359-78605378 None:intergenic 45.0%
TGACAATTGGGATGATGCAG+AGG - chr1_1:78605362-78605381 Msa0046450:intron 45.0%
GACAATTGGGATGATGCAGA+GGG - chr1_1:78605363-78605382 Msa0046450:intron 45.0%
TGGGAAAACAGACATAGCCA+AGG + chr1_1:78605872-78605891 None:intergenic 45.0%
CGAGCTAGGAATCTAAAAGC+TGG - chr1_1:78606123-78606142 Msa0046450:intron 45.0%
GGATTGATTAAGGATAGCCG+GGG + chr1_1:78606217-78606236 None:intergenic 45.0%
ATGTGGAATAGGTACAAGGC+TGG - chr1_1:78606282-78606301 Msa0046450:intron 45.0%
! GAATAGGTACAAGGCTGGTT+TGG - chr1_1:78606287-78606306 Msa0046450:intron 45.0%
!! CAAGGCTGGTTTGGATGAAT+TGG - chr1_1:78606296-78606315 Msa0046450:intron 45.0%
AGTGCAGAACACCACAGTTA+CGG + chr1_1:78606539-78606558 None:intergenic 45.0%
CCTCGTTCACCTTACAGAAA+AGG + chr1_1:78606686-78606705 None:intergenic 45.0%
! CCTTTTCTGTAAGGTGAACG+AGG - chr1_1:78606683-78606702 Msa0046450:intron 45.0%
! ACAGGGAAGGTTCTTTTTCC+AGG - chr1_1:78606977-78606996 Msa0046450:intron 45.0%
! CAGGGAAGGTTCTTTTTCCA+GGG - chr1_1:78606978-78606997 Msa0046450:intron 45.0%
ATGTCATTGTTTGTGAGCCC+TGG + chr1_1:78606998-78607017 None:intergenic 45.0%
CGGCTTCACATGGAATTGAA+GGG - chr1_1:78607022-78607041 Msa0046450:intron 45.0%
TGTTACAGGATCCTCTTCAG+TGG + chr1_1:78607350-78607369 None:intergenic 45.0%
TGGGGAAGACCCAAAAATGT+TGG - chr1_1:78607578-78607597 Msa0046450:CDS 45.0%
TTGAACCACCCATTCATCAC+TGG - chr1_1:78607672-78607691 Msa0046450:intron 45.0%
GTCACTTGCCAGTGATGAAT+GGG + chr1_1:78607683-78607702 None:intergenic 45.0%
CCAGTTAAGTGTACGCCTTT+AGG + chr1_1:78607870-78607889 None:intergenic 45.0%
! CCTAAAGGCGTACACTTAAC+TGG - chr1_1:78607867-78607886 Msa0046450:five_prime_UTR 45.0%
! AAAGGCGTACACTTAACTGG+CGG - chr1_1:78607870-78607889 Msa0046450:five_prime_UTR 45.0%
TCTCATTCAGGAGACATCAC+GGG - chr1_1:78608214-78608233 Msa0046450:five_prime_UTR 45.0%
CATAAAAGGAACCCAGGAGA+AGG - chr1_1:78608265-78608284 Msa0046450:five_prime_UTR 45.0%
CAAACCAAGATACCTTCTCC+TGG + chr1_1:78608280-78608299 None:intergenic 45.0%
! TGCTCTCTTTTGAGCTGTGA+GGG - chr1_1:78608422-78608441 Msa0046450:intron 45.0%
TCCAACTCAAGCAGTGACTA+AGG + chr1_1:78608671-78608690 None:intergenic 45.0%
! TTATCCATGGCTGGTCATTC+TGG - chr1_1:78608799-78608818 Msa0046450:intron 45.0%
ACAAGTCCATTGTTCATCGG+CGG - chr1_1:78609334-78609353 Msa0046450:intron 45.0%
ACTAAGTGAGCCAACTCCTT+CGG - chr1_1:78609363-78609382 Msa0046450:intron 45.0%
CTATTCAATCGTGATGGCAG+AGG + chr1_1:78609401-78609420 None:intergenic 45.0%
TTGATATGCAGTCTTGGGTG+TGG - chr1_1:78609503-78609522 Msa0046450:intron 45.0%
GTCTAGAAGTAGTGAGGATG+GGG - chr1_1:78609554-78609573 Msa0046450:five_prime_UTR 45.0%
TCTAGAAGTAGTGAGGATGG+GGG - chr1_1:78609555-78609574 Msa0046450:five_prime_UTR 45.0%
TTGTACCCTAGAGAGATGAG+GGG + chr1_1:78609718-78609737 None:intergenic 45.0%
! TGATAATGTTAGGACCAGGG+TGG + chr1_1:78609764-78609783 None:intergenic 45.0%
! CAGGTGATAATGTTAGGACC+AGG + chr1_1:78609768-78609787 None:intergenic 45.0%
GTCCTAACATTATCACCTGC+TGG - chr1_1:78609769-78609788 Msa0046450:intron 45.0%
! CTCCAGCAGGTGATAATGTT+AGG + chr1_1:78609774-78609793 None:intergenic 45.0%
! GAACTGGTTTCTAATAGGGG+TGG - chr1_1:78609825-78609844 Msa0046450:five_prime_UTR 45.0%
!! ACTGTTTTCGGGCATCATGT+CGG + chr1_1:78609934-78609953 None:intergenic 45.0%
TGTTTAGAAACGTCCAAGCC+TGG - chr1_1:78610036-78610055 Msa0046450:five_prime_UTR 45.0%
! TCTTCTCGACATGACTTGGA+AGG + chr1_1:78610062-78610081 None:intergenic 45.0%
GTCATTAATGTGGATCCCCA+GGG - chr1_1:78610132-78610151 Msa0046450:five_prime_UTR 45.0%
CTACTGAAATTGGAACCCTG+GGG + chr1_1:78610150-78610169 None:intergenic 45.0%
CCTACTGAAATTGGAACCCT+GGG + chr1_1:78610151-78610170 None:intergenic 45.0%
ACCTACTGAAATTGGAACCC+TGG + chr1_1:78610152-78610171 None:intergenic 45.0%
ACAGAGCAGGTGAATGGAAA+AGG + chr1_1:78610305-78610324 None:intergenic 45.0%
AGATAGACAGAGCAGGTGAA+TGG + chr1_1:78610311-78610330 None:intergenic 45.0%
TCCCTTGGGTCATATTATGG+GGG - chr1_1:78610404-78610423 Msa0046450:five_prime_UTR 45.0%
ACCCCCATAATATGACCCAA+GGG + chr1_1:78610408-78610427 None:intergenic 45.0%
AGAACATACAAGGACCGAAC+CGG + chr1_1:78610898-78610917 None:intergenic 45.0%
TACCATGAAATCCAAAGGCC+CGG + chr1_1:78611240-78611259 None:intergenic 45.0%
GAATCACCTTAAAGACGACC+CGG - chr1_1:78611995-78612014 Msa0046450:intron 45.0%
GAGTAAAGTACGAACCATCG+TGG + chr1_1:78612096-78612115 None:intergenic 45.0%
! ATTGTTGTGGGGTACTTTCG+TGG + chr1_1:78612140-78612159 None:intergenic 45.0%
GAACATCGAGATCACTAACC+TGG - chr1_1:78612256-78612275 Msa0046450:intron 45.0%
CGTATCCATTGGTACCTGTT+TGG - chr1_1:78612700-78612719 Msa0046450:intron 45.0%
! AACGGATTCCAAACAGGTGA+CGG + chr1_1:78612748-78612767 None:intergenic 45.0%
ACATGGGACCAAAAGTGAGA+TGG + chr1_1:78613059-78613078 None:intergenic 45.0%
CGAGTAACGAGGTAGAGAAA+TGG + chr1_1:78613606-78613625 None:intergenic 45.0%
TCTCTACCTCGTTACTCGTT+AGG - chr1_1:78613608-78613627 Msa0046450:five_prime_UTR 45.0%
! TGATTAGGTCTAAGGCGTGT+GGG - chr1_1:78613697-78613716 Msa0046450:five_prime_UTR 45.0%
TATATAAGCTGACCCACCGA+TGG + chr1_1:78613743-78613762 None:intergenic 45.0%
AAGTCTTCCATGTATCGTGC+TGG - chr1_1:78613951-78613970 Msa0046450:five_prime_UTR 45.0%
AGTCTTCCATGTATCGTGCT+GGG - chr1_1:78613952-78613971 Msa0046450:five_prime_UTR 45.0%
GGAGAAAAGGAATGAGCAAG+TGG - chr1_1:78614001-78614020 Msa0046450:five_prime_UTR 45.0%
! ATAGGAGGGGAAGATTTTGG+GGG - chr1_1:78614038-78614057 Msa0046450:five_prime_UTR 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - chr1_1:78614114-78614133 Msa0046450:five_prime_UTR 45.0%
! AGGGGAGAAAAAGGCTTTGA+GGG + chr1_1:78614289-78614308 None:intergenic 45.0%
! TGAGCATAGCTCAGTTGGTA+TGG - chr1_1:78614390-78614409 Msa0046450:intron 45.0%
TACATTTATCGTGCTGCACG+TGG - chr1_1:78614827-78614846 Msa0046450:intron 45.0%
! CACGTGGCTCTTTCTTTTCT+TGG - chr1_1:78614843-78614862 Msa0046450:intron 45.0%
TCAGAGGCCTATATGCACAA+AGG + chr1_1:78615094-78615113 None:intergenic 45.0%
TTATGTCCACCACCTCAACA+CGG - chr1_1:78615631-78615650 Msa0046450:five_prime_UTR 45.0%
TCATATCACGAACCGTGTTG+AGG + chr1_1:78615646-78615665 None:intergenic 45.0%
!!! TTTAAAATAAAATATTGTTT+AGG + chr1_1:78611890-78611909 None:intergenic 5.0%
!! ATAAATAATTATATAATTGA+AGG + chr1_1:78612340-78612359 None:intergenic 5.0%
!!! AAAAGAAAATTAATTTTTTT+AGG - chr1_1:78613257-78613276 Msa0046450:five_prime_UTR 5.0%
!! AAAAGAATAATAATAAAAAA+AGG + chr1_1:78613843-78613862 None:intergenic 5.0%
!!! TATTCTTTTTTTTTTTATAT+TGG - chr1_1:78613854-78613873 Msa0046450:five_prime_UTR 5.0%
!! CTTAATTTATTATATAATTT+CGG - chr1_1:78614899-78614918 Msa0046450:five_prime_UTR 5.0%
CACGGAGGTTCGTTCTGTAT+TGG + chr1_1:78600802-78600821 None:intergenic 50.0%
! ACGGTTAGTTATGGCACGCA+CGG + chr1_1:78600820-78600839 None:intergenic 50.0%
GAGGATTTGTCGTGGTCATC+GGG + chr1_1:78600981-78601000 None:intergenic 50.0%
GGAGGATTTGTCGTGGTCAT+CGG + chr1_1:78600982-78601001 None:intergenic 50.0%
GACGTTTGGAGGATTTGTCG+TGG + chr1_1:78600989-78601008 None:intergenic 50.0%
!!! GTTTTTTGCTGCTGTGGTGG+CGG + chr1_1:78601031-78601050 None:intergenic 50.0%
TCTCGATGATGAGCCTTTCG+AGG - chr1_1:78601142-78601161 Msa0046450:CDS 50.0%
TCTGTTTGGTCACTGAGACG+AGG + chr1_1:78601837-78601856 None:intergenic 50.0%
CTAGGCGTTTCAGTGAAGAC+TGG - chr1_1:78601994-78602013 Msa0046450:intron 50.0%
AGGCGTTTCAGTGAAGACTG+GGG - chr1_1:78601996-78602015 Msa0046450:intron 50.0%
! GTACTGATGCTCTGGGCAAT+GGG - chr1_1:78602366-78602385 Msa0046450:intron 50.0%
! TGACAATGATGACGACGCAC+TGG - chr1_1:78602472-78602491 Msa0046450:intron 50.0%
ACGCACTGGAGGCTAATAGA+AGG - chr1_1:78602486-78602505 Msa0046450:intron 50.0%
CGCACTGGAGGCTAATAGAA+GGG - chr1_1:78602487-78602506 Msa0046450:intron 50.0%
GAAGGGAAGTAAATCCCCAC+AGG - chr1_1:78602504-78602523 Msa0046450:intron 50.0%
! TCCACAGAGTGCCTGTTCTT+GGG + chr1_1:78602671-78602690 None:intergenic 50.0%
! TTCCACAGAGTGCCTGTTCT+TGG + chr1_1:78602672-78602691 None:intergenic 50.0%
CCCTCACTGTTTCCTCATCA+AGG + chr1_1:78602739-78602758 None:intergenic 50.0%
GATGAGGAAACAGTGAGGGA+AGG - chr1_1:78602740-78602759 Msa0046450:intron 50.0%
TCACGGCAGTAAGGATCTGA+TGG - chr1_1:78602778-78602797 Msa0046450:intron 50.0%
TTCTAGGTATCACAGTCGGG+AGG - chr1_1:78602823-78602842 Msa0046450:intron 50.0%
CTTGTTCCTGTCCTTATCCC+GGG + chr1_1:78602849-78602868 None:intergenic 50.0%
CCTTGTTCCTGTCCTTATCC+CGG + chr1_1:78602850-78602869 None:intergenic 50.0%
AACGTGGAAGGAGTCATGAC+AGG - chr1_1:78602987-78603006 Msa0046450:intron 50.0%
GGAGTCATGACAGGCATAGA+AGG - chr1_1:78602996-78603015 Msa0046450:intron 50.0%
TGACAGGCATAGAAGGGACA+TGG - chr1_1:78603003-78603022 Msa0046450:intron 50.0%
TAGGAGCAGGGAAAAGGATG+AGG - chr1_1:78603033-78603052 Msa0046450:intron 50.0%
AGGAGCAGGGAAAAGGATGA+GGG - chr1_1:78603034-78603053 Msa0046450:intron 50.0%
CAGGGAAAAGGATGAGGGTA+GGG - chr1_1:78603039-78603058 Msa0046450:intron 50.0%
ATGAGCAGGGACAGAACAAG+GGG - chr1_1:78603142-78603161 Msa0046450:intron 50.0%
GTGGTGAGAGAGATAGAGAC+TGG - chr1_1:78603164-78603183 Msa0046450:intron 50.0%
GGGATTATAGGAACCGGGAA+AGG - chr1_1:78603197-78603216 Msa0046450:intron 50.0%
! GAAGAGCAGAAGGCATAGCA+TGG + chr1_1:78603928-78603947 None:intergenic 50.0%
AGACCGTCACATGCTAGATG+TGG - chr1_1:78603976-78603995 Msa0046450:intron 50.0%
!! TGTGGATGTTGGCTCAGAGA+AGG - chr1_1:78604710-78604729 Msa0046450:intron 50.0%
GTGAGACACCAACTGGAGTT+AGG - chr1_1:78604917-78604936 Msa0046450:intron 50.0%
AAGGCTACTTATCTTGGGGG+CGG + chr1_1:78605127-78605146 None:intergenic 50.0%
ATCCCAATTGTCATGCAGGC+CGG + chr1_1:78605355-78605374 None:intergenic 50.0%
CGGGAAAACAGACATAGCCA+AGG + chr1_1:78605989-78606008 None:intergenic 50.0%
AGTTACTGCTGCACATGGGA+AGG - chr1_1:78606080-78606099 Msa0046450:intron 50.0%
GTTACTGCTGCACATGGGAA+GGG - chr1_1:78606081-78606100 Msa0046450:intron 50.0%
!! TCGGTCGCAATATTGGCCTT+AGG - chr1_1:78606460-78606479 Msa0046450:intron 50.0%
! TCCTCACAGCAGTTAGCCTA+AGG + chr1_1:78606479-78606498 None:intergenic 50.0%
! CTGAAGCATCTCCGTAACTG+TGG - chr1_1:78606525-78606544 Msa0046450:intron 50.0%
TGACATGTTGCGGCTTCACA+TGG - chr1_1:78607012-78607031 Msa0046450:intron 50.0%
GCGGCTTCACATGGAATTGA+AGG - chr1_1:78607021-78607040 Msa0046450:intron 50.0%
!! ACAATCGTTGCTGGCTCTTC+TGG - chr1_1:78607558-78607577 Msa0046450:CDS 50.0%
!! CAATCGTTGCTGGCTCTTCT+GGG - chr1_1:78607559-78607578 Msa0046450:CDS 50.0%
!! AATCGTTGCTGGCTCTTCTG+GGG - chr1_1:78607560-78607579 Msa0046450:CDS 50.0%
ACTTGCCAGTGATGAATGGG+TGG + chr1_1:78607680-78607699 None:intergenic 50.0%
GGTCACTTGCCAGTGATGAA+TGG + chr1_1:78607684-78607703 None:intergenic 50.0%
TATCTTCTCTGTACGGCCCA+AGG - chr1_1:78607797-78607816 Msa0046450:five_prime_UTR 50.0%
CAACTGCGATGACACTCCTT+GGG + chr1_1:78607816-78607835 None:intergenic 50.0%
ACAACTGCGATGACACTCCT+TGG + chr1_1:78607817-78607836 None:intergenic 50.0%
ACTTAACTGGCGGTTCTCAG+TGG - chr1_1:78607880-78607899 Msa0046450:five_prime_UTR 50.0%
!! GAACCCAGGAGAAGGTATCT+TGG - chr1_1:78608273-78608292 Msa0046450:five_prime_UTR 50.0%
! GTGCTCTCTTTTGAGCTGTG+AGG - chr1_1:78608421-78608440 Msa0046450:intron 50.0%
CTGCACCTGGATGAAAATGC+AGG + chr1_1:78608546-78608565 None:intergenic 50.0%
! CTGCATTTTCATCCAGGTGC+AGG - chr1_1:78608544-78608563 Msa0046450:intron 50.0%
GCCTTAGTCACTGCTTGAGT+TGG - chr1_1:78608667-78608686 Msa0046450:five_prime_UTR 50.0%
!! GAGGCCATAAAAGGTACCGA+AGG + chr1_1:78609382-78609401 None:intergenic 50.0%
GTGATGGCAGAGGCCATAAA+AGG + chr1_1:78609391-78609410 None:intergenic 50.0%
CTAGAAGTAGTGAGGATGGG+GGG - chr1_1:78609556-78609575 Msa0046450:five_prime_UTR 50.0%
TCGTTTCCCCTCATCTCTCT+AGG - chr1_1:78609709-78609728 Msa0046450:intron 50.0%
CGTTTCCCCTCATCTCTCTA+GGG - chr1_1:78609710-78609729 Msa0046450:intron 50.0%
!! TTTCACCGTTGATTCCACCC+TGG - chr1_1:78609747-78609766 Msa0046450:intron 50.0%
TAGGACCAGGGTGGAATCAA+CGG + chr1_1:78609755-78609774 None:intergenic 50.0%
!! CTGTTTTCGGGCATCATGTC+GGG + chr1_1:78609933-78609952 None:intergenic 50.0%
GGTCATTAATGTGGATCCCC+AGG - chr1_1:78610131-78610150 Msa0046450:five_prime_UTR 50.0%
CCCAGGGTTCCAATTTCAGT+AGG - chr1_1:78610148-78610167 Msa0046450:five_prime_UTR 50.0%
CTCTGTCTATCTCCGAGTCA+TGG - chr1_1:78610319-78610338 Msa0046450:intron 50.0%
CACCCCCATAATATGACCCA+AGG + chr1_1:78610409-78610428 None:intergenic 50.0%
! GGTTCGGTCCTTGTATGTTC+TGG - chr1_1:78610897-78610916 Msa0046450:intron 50.0%
CACACCCAATGGTTAGCAAG+AGG - chr1_1:78610988-78611007 Msa0046450:intron 50.0%
TCGTGGTAGCCACAACATCA+TGG + chr1_1:78612079-78612098 None:intergenic 50.0%
TGATGTTGTGGCTACCACGA+TGG - chr1_1:78612079-78612098 Msa0046450:intron 50.0%
GGAAGATTCCGTCACCTGTT+TGG - chr1_1:78612737-78612756 Msa0046450:intron 50.0%
CAGAGACCTAACGAGTAACG+AGG + chr1_1:78613617-78613636 None:intergenic 50.0%
! GTGATTAGGTCTAAGGCGTG+TGG - chr1_1:78613696-78613715 Msa0046450:five_prime_UTR 50.0%
! GATTAGGTCTAAGGCGTGTG+GGG - chr1_1:78613698-78613717 Msa0046450:five_prime_UTR 50.0%
ATTGACGAATGTGCCATCGG+TGG - chr1_1:78613727-78613746 Msa0046450:five_prime_UTR 50.0%
TTGACGAATGTGCCATCGGT+GGG - chr1_1:78613728-78613747 Msa0046450:five_prime_UTR 50.0%
! TAGGAGGGGAAGATTTTGGG+GGG - chr1_1:78614039-78614058 Msa0046450:five_prime_UTR 50.0%
!! GGGGAGAAAAAGGCTTTGAG+GGG + chr1_1:78614288-78614307 None:intergenic 50.0%
GAGGGGAGAAAAAGGCTTTG+AGG + chr1_1:78614290-78614309 None:intergenic 50.0%
CGAGTTTGGAGGGGAGAAAA+AGG + chr1_1:78614298-78614317 None:intergenic 50.0%
! AAGGAGTGCAAATGGAGTCG+TGG - chr1_1:78615384-78615403 Msa0046450:five_prime_UTR 50.0%
TATCACGAACCGTGTTGAGG+TGG + chr1_1:78615643-78615662 None:intergenic 50.0%
GTTAGTTATGGCACGCACGG+AGG + chr1_1:78600817-78600836 None:intergenic 55.0%
TGCTTGCGTCGAGAATCGGT+GGG + chr1_1:78600942-78600961 None:intergenic 55.0%
ATGCTTGCGTCGAGAATCGG+TGG + chr1_1:78600943-78600962 None:intergenic 55.0%
GCGATGCTTGCGTCGAGAAT+CGG + chr1_1:78600946-78600965 None:intergenic 55.0%
GGTCATCGGGAGAAGGTGAT+CGG + chr1_1:78600968-78600987 None:intergenic 55.0%
TTGTCGTGGTCATCGGGAGA+AGG + chr1_1:78600975-78600994 None:intergenic 55.0%
GCGGTGTTTGTGACGTTTGG+AGG + chr1_1:78601000-78601019 None:intergenic 55.0%
GTGGCGGTGTTTGTGACGTT+TGG + chr1_1:78601003-78601022 None:intergenic 55.0%
!!! CGCGTTTTTTGCTGCTGTGG+TGG + chr1_1:78601034-78601053 None:intergenic 55.0%
!!! CGTCGCGTTTTTTGCTGCTG+TGG + chr1_1:78601037-78601056 None:intergenic 55.0%
! TCTCCCTGCTGATGACGTTG+AGG - chr1_1:78601109-78601128 Msa0046450:CDS 55.0%
CCTCCTCAACGTCATCAGCA+GGG + chr1_1:78601115-78601134 None:intergenic 55.0%
! CCTGCTGATGACGTTGAGGA+GGG - chr1_1:78601113-78601132 Msa0046450:CDS 55.0%
GGCGTTTCAGTGAAGACTGG+GGG - chr1_1:78601997-78602016 Msa0046450:intron 55.0%
ACTAGGAGGGATGTTCGAGC+TGG - chr1_1:78602344-78602363 Msa0046450:intron 55.0%
!! TCGAGCTGGTACTGATGCTC+TGG - chr1_1:78602358-78602377 Msa0046450:intron 55.0%
!! CGAGCTGGTACTGATGCTCT+GGG - chr1_1:78602359-78602378 Msa0046450:intron 55.0%
!! GGTACTGATGCTCTGGGCAA+TGG - chr1_1:78602365-78602384 Msa0046450:intron 55.0%
! TGCTCTGGGCAATGGGCATT+TGG - chr1_1:78602373-78602392 Msa0046450:intron 55.0%
! GCTCTGGGCAATGGGCATTT+GGG - chr1_1:78602374-78602393 Msa0046450:intron 55.0%
! CAATGATGACGACGCACTGG+AGG - chr1_1:78602475-78602494 Msa0046450:intron 55.0%
AGCATGCTCGTCCCAAGAAC+AGG - chr1_1:78602657-78602676 Msa0046450:intron 55.0%
TCCCAAGAACAGGCACTCTG+TGG - chr1_1:78602667-78602686 Msa0046450:intron 55.0%
AACAGGCACTCTGTGGAACG+AGG - chr1_1:78602674-78602693 Msa0046450:intron 55.0%
!! GGAAGAAGGGAGCATCGTCA+CGG - chr1_1:78602761-78602780 Msa0046450:intron 55.0%
CCGGGATAAGGACAGGAACA+AGG - chr1_1:78602847-78602866 Msa0046450:intron 55.0%
GCAGGGAAAAGGATGAGGGT+AGG - chr1_1:78603038-78603057 Msa0046450:intron 55.0%
GGATAAGCATATGCGTCGCG+AGG - chr1_1:78603285-78603304 Msa0046450:intron 55.0%
!! GTTGGCTCAGAGAAGGTACC+TGG - chr1_1:78604717-78604736 Msa0046450:intron 55.0%
!! TCAGAGAAGGTACCTGGTGC+TGG - chr1_1:78604723-78604742 Msa0046450:intron 55.0%
CTACTTATCTTGGGGGCGGA+AGG + chr1_1:78605123-78605142 None:intergenic 55.0%
! GGGTTACTGATTGAGAGGGC+CGG - chr1_1:78605333-78605352 Msa0046450:intron 55.0%
GGTTGTGGTAGCAGATCCAC+AGG + chr1_1:78605773-78605792 None:intergenic 55.0%
GCCTTAGGCTAACTGCTGTG+AGG - chr1_1:78606475-78606494 Msa0046450:intron 55.0%
!! TCCTGGCAGGGAGCATTTAC+TGG - chr1_1:78607292-78607311 Msa0046450:intron 55.0%
TCCAGTAAATGCTCCCTGCC+AGG + chr1_1:78607296-78607315 None:intergenic 55.0%
TCGTCTTGGATCCGGACAAG+CGG - chr1_1:78607631-78607650 Msa0046450:intron 55.0%
GAGACTGTCAACCGCTTGTC+CGG + chr1_1:78607645-78607664 None:intergenic 55.0%
CAGGAGACATCACGGGTTTC+AGG - chr1_1:78608221-78608240 Msa0046450:five_prime_UTR 55.0%
! GTAGTACTGGAACCTGCACC+TGG + chr1_1:78608559-78608578 None:intergenic 55.0%
GCATCCAGAATGACCAGCCA+TGG + chr1_1:78608806-78608825 None:intergenic 55.0%
TGGATGCCGTGGACCATCAA+AGG + chr1_1:78609061-78609080 None:intergenic 55.0%
TCGTAGGAAACTGGATGCCG+TGG + chr1_1:78609072-78609091 None:intergenic 55.0%
AGTCGTGTGTTTGTGCGCGT+AGG - chr1_1:78609248-78609267 Msa0046450:five_prime_UTR 55.0%
AGTCCATTGTTCATCGGCGG+AGG - chr1_1:78609337-78609356 Msa0046450:intron 55.0%
GTCCATTGTTCATCGGCGGA+GGG - chr1_1:78609338-78609357 Msa0046450:intron 55.0%
GAGGATGGGGGGAAAGAACA+TGG - chr1_1:78609567-78609586 Msa0046450:five_prime_UTR 55.0%
GACAAAGTTGCAGCTCCAGC+AGG + chr1_1:78609787-78609806 None:intergenic 55.0%
GAGCTGCAACTTTGTCCCCA+AGG - chr1_1:78609791-78609810 Msa0046450:five_prime_UTR 55.0%
! ATGACTTGGAAGGCCAGGCT+TGG + chr1_1:78610052-78610071 None:intergenic 55.0%
! TCGACATGACTTGGAAGGCC+AGG + chr1_1:78610057-78610076 None:intergenic 55.0%
CAAGGGGGCCACATCCATTA+CGG + chr1_1:78610259-78610278 None:intergenic 55.0%
GACTCGGAGATAGACAGAGC+AGG + chr1_1:78610318-78610337 None:intergenic 55.0%
GACCGGGCCTTTGGATTTCA+TGG - chr1_1:78611235-78611254 Msa0046450:five_prime_UTR 55.0%
TCACCTTAAAGACGACCCGG+AGG - chr1_1:78611998-78612017 Msa0046450:intron 55.0%
GTACCTCCGGGTCGTCTTTA+AGG + chr1_1:78612004-78612023 None:intergenic 55.0%
CCAACTGAGCTATGCTCACG+AGG + chr1_1:78614388-78614407 None:intergenic 55.0%
CCTCGTGAGCATAGCTCAGT+TGG - chr1_1:78614385-78614404 Msa0046450:five_prime_UTR 55.0%
! CCCTGCTGATGACGTTGAGG+AGG - chr1_1:78601112-78601131 Msa0046450:CDS 60.0%
CCCTCCTCAACGTCATCAGC+AGG + chr1_1:78601116-78601135 None:intergenic 60.0%
!! GGAGCATCGTCACGGCAGTA+AGG - chr1_1:78602769-78602788 Msa0046450:intron 60.0%
TAGGAGTCGGGACCGAGATG+TGG - chr1_1:78602883-78602902 Msa0046450:intron 60.0%
AGCAGGGACAGAACAAGGGG+TGG - chr1_1:78603145-78603164 Msa0046450:intron 60.0%
!! GAGAAGGTACCTGGTGCTGG+TGG - chr1_1:78604726-78604745 Msa0046450:intron 60.0%
GGCCGGCCTGCATGACAATT+GGG - chr1_1:78605350-78605369 Msa0046450:intron 60.0%
CACCCTCCGCCGATGAACAA+TGG + chr1_1:78609343-78609362 None:intergenic 60.0%
CAAGGTCCGGGGTTCAAACC+CGG - chr1_1:78614430-78614449 Msa0046450:intron 60.0%
AAGGTCCGGGGTTCAAACCC+GGG - chr1_1:78614431-78614450 Msa0046450:intron 60.0%
CACGAACCGTGTTGAGGTGG+TGG + chr1_1:78615640-78615659 None:intergenic 60.0%
!! TGCTGCTGTGGTGGCGGTGA+CGG + chr1_1:78601025-78601044 None:intergenic 65.0%
GGTATCACAGTCGGGAGGCC+CGG - chr1_1:78602828-78602847 Msa0046450:intron 65.0%
GTATCACAGTCGGGAGGCCC+GGG - chr1_1:78602829-78602848 Msa0046450:intron 65.0%
!! GTACCTGGTGCTGGTGGCCT+AGG - chr1_1:78604732-78604751 Msa0046450:intron 65.0%
GGGCCGGCCTGCATGACAAT+TGG - chr1_1:78605349-78605368 Msa0046450:intron 65.0%
!! TGTGGTGGCGGTGACGGTGG+CGG + chr1_1:78601019-78601038 None:intergenic 70.0%
!! TGCTGTGGTGGCGGTGACGG+TGG + chr1_1:78601022-78601041 None:intergenic 70.0%
CAGTCGGGAGGCCCGGGATA+AGG - chr1_1:78602835-78602854 Msa0046450:intron 70.0%
GGGAGGCCCGGGATAAGGAC+AGG - chr1_1:78602840-78602859 Msa0046450:intron 70.0%
TCGCCTAGGCCACCAGCACC+AGG + chr1_1:78604738-78604757 None:intergenic 70.0%
!! TGGTGCTGGTGGCCTAGGCG+AGG - chr1_1:78604737-78604756 Msa0046450:intron 70.0%
!! GGTGCTGGTGGCCTAGGCGA+GGG - chr1_1:78604738-78604757 Msa0046450:intron 70.0%
GGTGGCCCGGGTTTGAACCC+CGG + chr1_1:78614439-78614458 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78600769 78615813 78600769 ID=Msa0046450;Name=Msa0046450
chr1_1 mRNA 78600769 78615813 78600769 ID=Msa0046450-mRNA-1;Parent=Msa0046450;Name=Msa0046450-mRNA-1;_AED=0.19;_eAED=0.19;_QI=4570|0.88|0.88|1|0.58|0.72|18|255|146
chr1_1 exon 78600769 78601204 78600769 ID=Msa0046450-mRNA-1:exon:27101;Parent=Msa0046450-mRNA-1
chr1_1 exon 78606413 78606450 78606413 ID=Msa0046450-mRNA-1:exon:27100;Parent=Msa0046450-mRNA-1
chr1_1 exon 78607448 78607600 78607448 ID=Msa0046450-mRNA-1:exon:27099;Parent=Msa0046450-mRNA-1
chr1_1 exon 78607709 78608358 78607709 ID=Msa0046450-mRNA-1:exon:27098;Parent=Msa0046450-mRNA-1
chr1_1 exon 78608663 78608749 78608663 ID=Msa0046450-mRNA-1:exon:27097;Parent=Msa0046450-mRNA-1
chr1_1 exon 78608889 78609069 78608889 ID=Msa0046450-mRNA-1:exon:27096;Parent=Msa0046450-mRNA-1
chr1_1 exon 78609207 78609281 78609207 ID=Msa0046450-mRNA-1:exon:27095;Parent=Msa0046450-mRNA-1
chr1_1 exon 78609510 78609673 78609510 ID=Msa0046450-mRNA-1:exon:27094;Parent=Msa0046450-mRNA-1
chr1_1 exon 78609772 78609886 78609772 ID=Msa0046450-mRNA-1:exon:27093;Parent=Msa0046450-mRNA-1
chr1_1 exon 78609998 78610289 78609998 ID=Msa0046450-mRNA-1:exon:27092;Parent=Msa0046450-mRNA-1
chr1_1 exon 78610383 78610539 78610383 ID=Msa0046450-mRNA-1:exon:27091;Parent=Msa0046450-mRNA-1
chr1_1 exon 78611189 78611261 78611189 ID=Msa0046450-mRNA-1:exon:27090;Parent=Msa0046450-mRNA-1
chr1_1 exon 78611637 78611705 78611637 ID=Msa0046450-mRNA-1:exon:27089;Parent=Msa0046450-mRNA-1
chr1_1 exon 78611812 78611972 78611812 ID=Msa0046450-mRNA-1:exon:27088;Parent=Msa0046450-mRNA-1
chr1_1 exon 78612906 78613078 78612906 ID=Msa0046450-mRNA-1:exon:27087;Parent=Msa0046450-mRNA-1
chr1_1 exon 78613160 78614406 78613160 ID=Msa0046450-mRNA-1:exon:27086;Parent=Msa0046450-mRNA-1
chr1_1 exon 78614549 78614797 78614549 ID=Msa0046450-mRNA-1:exon:27085;Parent=Msa0046450-mRNA-1
chr1_1 exon 78614868 78615813 78614868 ID=Msa0046450-mRNA-1:exon:27084;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78614868 78615813 78614868 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78614549 78614797 78614549 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78613160 78614406 78613160 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78612906 78613078 78612906 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78611812 78611972 78611812 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78611637 78611705 78611637 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78611189 78611261 78611189 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78610383 78610539 78610383 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78609998 78610289 78609998 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78609772 78609886 78609772 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78609510 78609673 78609510 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78609207 78609281 78609207 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78608889 78609069 78608889 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78608663 78608749 78608663 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 five_prime_UTR 78607778 78608358 78607778 ID=Msa0046450-mRNA-1:five_prime_utr;Parent=Msa0046450-mRNA-1
chr1_1 CDS 78607709 78607777 78607709 ID=Msa0046450-mRNA-1:cds;Parent=Msa0046450-mRNA-1
chr1_1 CDS 78607448 78607600 78607448 ID=Msa0046450-mRNA-1:cds;Parent=Msa0046450-mRNA-1
chr1_1 CDS 78606413 78606450 78606413 ID=Msa0046450-mRNA-1:cds;Parent=Msa0046450-mRNA-1
chr1_1 CDS 78601024 78601204 78601024 ID=Msa0046450-mRNA-1:cds;Parent=Msa0046450-mRNA-1
chr1_1 three_prime_UTR 78600769 78601023 78600769 ID=Msa0046450-mRNA-1:three_prime_utr;Parent=Msa0046450-mRNA-1
Gene Sequence

>Msa0046450

ATGGCTGGTCATTCTGGATGCATTTCTACTGGATGTTTGGCCGTGTTCTTGAAGCATATTCATATCTCGGTAATGTATCATACTCCTGCAGTTTCTGTAAGTATATTGAAATCCATTTCCTTTCTCATTTTTGTCAGTATTAATGCCTTTGATGGTCCACGGCATCCAGTTTCCTACGATGATATCATAATACAGAGTTATCATTTCTGTTTGTGGATGGATGTCATTAATGTGGATCCCCAGGGTTCCAATTTCAGTAGGTTTCAAAGGAGTGCAAATGGAGTCGTGGCACATCACATAAAGTGCATGAAAGGATCATATATAGTGTTTGAGCATAAGCAAATGTTGATCGAATACAAGGGGTACTTGACTCGCCGATCAGACGACCAACTAAAAATCAGGCAAAAACTTTATTTAAATATCGATAATAAACTAGATTAG
Protein sequence

>Msa0046450

MAGHSGCISTGCLAVFLKHIHISVMYHTPAVSVSILKSISFLIFVSINAFDGPRHPVSYDDIIIQSYHFCLWMDVINVDPQGSNFSRFQRSANGVVAHHIKCMKGSYIVFEHKQMLIEYKGYLTRRSDDQLKIRQKLYLNIDNKLD*