AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1388860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388860 MtrunA17_Chr1g0148371 95.872 872 36 0 1 872 1 872 0.0 1457
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388860 AT3G49601.1 56.250 208 75 4 1 202 1 198 2.21e-55 202

Find 272 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACTGAAAACATTGTATT+TGG 0.174540 tig0021196:+72408 None:intergenic
TGCTGATTCAGATATTATTT+TGG 0.193625 tig0021196:+76941 None:intergenic
TTGAGGGATGAAGACGATTT+TGG 0.202781 tig0021196:-72855 Msa1388860:CDS
GAAATGATAATGATTATAAA+AGG 0.232978 tig0021196:-73481 Msa1388860:CDS
CAAGAGATGGAAAGCATAAA+AGG 0.234081 tig0021196:-73409 Msa1388860:CDS
TTTAACACTTTCTTAATAAT+AGG 0.248340 tig0021196:+72212 None:intergenic
TCTTACTGGACCACAGTATT+TGG 0.251086 tig0021196:+72368 None:intergenic
CTGTCGTTTATTTCCTCCTT+TGG 0.299374 tig0021196:+73914 None:intergenic
TTGAGGGATGGGGATGATTA+TGG 0.306717 tig0021196:-73212 Msa1388860:CDS
TGCCTCTTACTAGCCTTTAC+TGG 0.312132 tig0021196:+74292 None:intergenic
ATTGTTTGACTTCTAGAATC+TGG 0.313643 tig0021196:+73800 None:intergenic
CATTGGTACCAGACCCTCTT+GGG 0.314345 tig0021196:+76553 None:intergenic
ATGAAGATAGAGATAGAGAT+AGG 0.324574 tig0021196:-73754 Msa1388860:CDS
GACAAGACAAACATGTTAAA+AGG 0.325484 tig0021196:-74051 Msa1388860:CDS
ACTGAAATCTCTGTCCAAAA+AGG 0.326245 tig0021196:+74669 None:intergenic
TTTCCTTTCTAGCAGCAATT+TGG 0.327828 tig0021196:+74836 None:intergenic
AATAAAGTAAAGGCTGTAAG+AGG 0.331751 tig0021196:-72459 Msa1388860:three_prime_UTR
TCTAGGGATGGGGATGATTA+TGG 0.332132 tig0021196:-73032 Msa1388860:CDS
ATACCGACTATCCCTCTTAC+TGG 0.336030 tig0021196:+72354 None:intergenic
ATGAAGAAAGGAAGAACTTA+AGG 0.338628 tig0021196:-73085 Msa1388860:CDS
ATGGAGAAAGAAAGAGCTTA+AGG 0.341025 tig0021196:-73013 Msa1388860:CDS
GATGGACAAGATAGGAAGTT+TGG 0.347099 tig0021196:-73707 Msa1388860:CDS
TTGGAGAAAGAAAGCACTTA+AGG 0.349814 tig0021196:-72836 Msa1388860:CDS
ATGGAGAAAGAAAGAACTTA+AGG 0.352771 tig0021196:-73193 Msa1388860:CDS
TCAGCTGAATCTGCCGCTTT+CGG 0.354578 tig0021196:+76397 None:intergenic
GAGAAAGAAGGCATTATAGA+AGG 0.355736 tig0021196:-72533 Msa1388860:CDS
AACAATATGTACAACGGAAT+CGG 0.356790 tig0021196:-76585 Msa1388860:exon
AGTGTTAAATGTTCCAAGAT+TGG 0.357105 tig0021196:-72198 Msa1388860:three_prime_UTR
AGTAGCAGTGATAGTGAAAC+TGG 0.362833 tig0021196:-74004 Msa1388860:CDS
TGAAAACGATGGATCCAATA+TGG 0.363035 tig0021196:-76271 Msa1388860:CDS
TTGAGTTCTTTCTTTCTTTG+CGG 0.366491 tig0021196:+72694 None:intergenic
AAACACTCACTTATCCATAT+TGG 0.373034 tig0021196:+76257 None:intergenic
ATCATCCTTGTACTTTCTCT+TGG 0.374078 tig0021196:+74555 None:intergenic
AGAGAGGCAGAAATTATAAC+AGG 0.378338 tig0021196:-73574 Msa1388860:CDS
TGAAGATAAGCTGATTGATC+AGG 0.385864 tig0021196:-76361 Msa1388860:CDS
TCATCCTTGTACTTTCTCTT+GGG 0.389930 tig0021196:+74556 None:intergenic
TCAGCAACCTTCGAAGTTCT+CGG 0.393476 tig0021196:+76498 None:intergenic
GGCAGTGTTAGGCATGCTTC+AGG 0.402014 tig0021196:-74073 Msa1388860:CDS
TTAGAGAAACAAAGACTAGA+AGG 0.406927 tig0021196:-72908 Msa1388860:CDS
GATTCTTTAAGAAAATCATA+TGG 0.409706 tig0021196:-73842 Msa1388860:CDS
TATGGAAGAACTAGAAAAGT+TGG 0.411014 tig0021196:-73959 Msa1388860:CDS
TGGAGAAAGAAAGCACTTAA+GGG 0.413260 tig0021196:-72835 Msa1388860:CDS
AGAGGTAATGCTGCAGGAAA+AGG 0.424877 tig0021196:-73893 Msa1388860:CDS
TTTCAGTCGGAAGAAACAAT+TGG 0.425008 tig0021196:-74653 Msa1388860:CDS
GTCAAATTTGCTAAGAATGA+TGG 0.435852 tig0021196:-73725 Msa1388860:CDS
TGAAAATATGAAGGGGTTTG+AGG 0.438018 tig0021196:-76478 Msa1388860:CDS
AGAAAGAGCTTAAGGGATGA+GGG 0.439138 tig0021196:-73005 Msa1388860:CDS
TGGAGAAAGAAAGAGCTTAA+GGG 0.439219 tig0021196:-73012 Msa1388860:CDS
GAAGGAAGACCTTGAGGGAT+GGG 0.445522 tig0021196:-73223 Msa1388860:CDS
TTGGACGAATTGATCGGAAT+AGG 0.455169 tig0021196:-73532 Msa1388860:CDS
GAAAATATGAAGGGGTTTGA+GGG 0.457175 tig0021196:-76477 Msa1388860:CDS
CCATTGGTACCAGACCCTCT+TGG 0.460535 tig0021196:+76552 None:intergenic
AGAGAAGAGCTCTAGGGATG+TGG 0.462100 tig0021196:-72937 Msa1388860:CDS
TCACCAAATTGCTGCTAGAA+AGG 0.462437 tig0021196:-74839 Msa1388860:CDS
CTAAGCACCGCAAGAAAGGC+AGG 0.463539 tig0021196:-74390 Msa1388860:CDS
GGGATGATGATCGTGGAGAA+AGG 0.464631 tig0021196:-72512 Msa1388860:CDS
AAATACTGTGGTCCAGTAAG+AGG 0.465571 tig0021196:-72366 Msa1388860:three_prime_UTR
GGCTCTATTGATGCGGACTC+TGG 0.469004 tig0021196:-74100 Msa1388860:CDS
ACAATATGTACAACGGAATC+GGG 0.472478 tig0021196:-76584 Msa1388860:exon
AAGAAAGAGCTTAAGGGATG+AGG 0.473531 tig0021196:-73006 Msa1388860:CDS
TGGAGAAAGAAAGAACTTAA+GGG 0.474386 tig0021196:-73192 Msa1388860:CDS
AGAAAAGGAGCTCTAGGGAT+GGG 0.475231 tig0021196:-73043 Msa1388860:CDS
AATACAGATGGGAATGATGA+AGG 0.476248 tig0021196:-74757 Msa1388860:CDS
TAGTGCCAAGGTTGATGGAT+TGG 0.477705 tig0021196:-73864 Msa1388860:CDS
AAGAAAGAACTTAAGGGATG+AGG 0.478065 tig0021196:-73186 Msa1388860:CDS
CTAAGAATGATGGACAAGAT+AGG 0.479516 tig0021196:-73715 Msa1388860:CDS
AGTACGGATGATGAGAAAAC+AGG 0.480046 tig0021196:-74514 Msa1388860:CDS
AGAAAGAACTTAAGGGATGA+GGG 0.480455 tig0021196:-73185 Msa1388860:CDS
TGAAGAGGCGAGGAATAACT+TGG 0.480606 tig0021196:-76307 Msa1388860:CDS
ATTTCAAGTTGAGTTCCAAC+TGG 0.482563 tig0021196:-72255 Msa1388860:three_prime_UTR
AATGAAGATGATTCAAGAGA+TGG 0.482878 tig0021196:-73422 Msa1388860:CDS
CAGAAGGGAGTAGGAAGAGC+GGG 0.483254 tig0021196:-72484 Msa1388860:exon
TTAAGGGATGAGGGTGGCAG+AGG 0.484214 tig0021196:-72996 Msa1388860:CDS
TGAAGAAAGGAAGAACTTAA+GGG 0.484449 tig0021196:-73084 Msa1388860:CDS
GTGGAGAGAAAAGGAGCTCT+AGG 0.485273 tig0021196:-73049 Msa1388860:CDS
TGGACGAATTGATCGGAATA+GGG 0.486136 tig0021196:-73531 Msa1388860:CDS
GAAACATTGAAAGCTGCTCT+TGG 0.486237 tig0021196:-74805 Msa1388860:CDS
AGGATCAATATATCCAATCT+TGG 0.486286 tig0021196:+72185 None:intergenic
TAGAAGTCAAACAATAGCTA+AGG 0.489116 tig0021196:-73792 Msa1388860:CDS
GAGAAAAGAAGCTCTAAAGA+TGG 0.490271 tig0021196:-73116 Msa1388860:CDS
ATTCTTTAAGAAAATCATAT+GGG 0.491036 tig0021196:-73841 Msa1388860:CDS
AATAAAGAACTCTAGGTATG+AGG 0.492130 tig0021196:-72757 Msa1388860:CDS
GCTGATGAATTAAATACAGA+TGG 0.493661 tig0021196:-74769 Msa1388860:CDS
TGGGAGTTCCACCCTTCTTG+TGG 0.493693 tig0021196:+74575 None:intergenic
ACTCTGGTAGAGGCAGTGTT+AGG 0.494351 tig0021196:-74084 Msa1388860:CDS
ATGATGAGAAAACAGGTAGA+AGG 0.494540 tig0021196:-74507 Msa1388860:CDS
AAGGATGAAGATTATCCTAC+AGG 0.494644 tig0021196:-73317 Msa1388860:CDS
GTGGAGAAAGGAAGCACAGA+AGG 0.495191 tig0021196:-72500 Msa1388860:CDS
AACCAGTAAAGGCTAGTAAG+AGG 0.497041 tig0021196:-74294 Msa1388860:CDS
TAGAGAAAGAAAGAACTCTC+TGG 0.497810 tig0021196:-73156 Msa1388860:CDS
GAGGGAGATCAAGGTACTGC+TGG 0.500186 tig0021196:-76459 Msa1388860:CDS
TTAAGGGATGGCAATGGCCG+TGG 0.501216 tig0021196:-73068 Msa1388860:CDS
GCCGAGGAGAGAAGAGCTCT+AGG 0.501966 tig0021196:-72944 Msa1388860:CDS
ATCATCATGAAGGCGTGCCC+AGG 0.502347 tig0021196:-74249 Msa1388860:CDS
AAATGATAATGATTATAAAA+GGG 0.503477 tig0021196:-73480 Msa1388860:CDS
CACTTCACTAGTCCTACGCC+TGG 0.504019 tig0021196:+74231 None:intergenic
TTACAAACCCCAAGAGGGTC+TGG 0.504419 tig0021196:-76561 Msa1388860:CDS
AAGAAAGATCAGAAGGATTG+AGG 0.504787 tig0021196:-73258 Msa1388860:CDS
TCTCGGGATGGTGATGGCCG+AGG 0.505947 tig0021196:-72960 Msa1388860:CDS
TACAGGAAGAAAGCACTTGA+GGG 0.506535 tig0021196:-73300 Msa1388860:CDS
TAATGATTATAAAAGGGATC+AGG 0.509329 tig0021196:-73474 Msa1388860:CDS
AGAAAAGAAGCTCTAAAGAT+GGG 0.509515 tig0021196:-73115 Msa1388860:CDS
CCCTAGAGCTCTTCTCTCCT+CGG 0.511915 tig0021196:+72943 None:intergenic
ATCAGCATCAGATTCCTCTT+CGG 0.512144 tig0021196:+74174 None:intergenic
TCTAAAGCAGCTAGGATCAG+AGG 0.513743 tig0021196:-73620 Msa1388860:CDS
AAGGAAGACCTTGAGGGATG+GGG 0.513937 tig0021196:-73222 Msa1388860:CDS
GAAGGTTGCTGAAAATATGA+AGG 0.515977 tig0021196:-76487 Msa1388860:CDS
GTGTAGAAATAAAGAACTCT+AGG 0.518740 tig0021196:-72764 Msa1388860:CDS
AAGCAGAAAACTAGGAGGTA+TGG 0.521789 tig0021196:-74121 Msa1388860:CDS
ATGGAAGAACTAGAAAAGTT+GGG 0.521877 tig0021196:-73958 Msa1388860:CDS
ATACAGATGGGAATGATGAA+GGG 0.522361 tig0021196:-74756 Msa1388860:CDS
AAGAGATGGAAAGCATAAAA+GGG 0.524413 tig0021196:-73408 Msa1388860:CDS
TACTGCTGGTGTTAGTAGAA+AGG 0.524874 tig0021196:-76445 Msa1388860:CDS
AAGGGGTTTGAGGGAGATCA+AGG 0.526411 tig0021196:-76468 Msa1388860:CDS
GATGGGAATGATGAAGGGGC+TGG 0.527895 tig0021196:-74751 Msa1388860:CDS
GGATTATGAAACAAGAAGGA+AGG 0.531442 tig0021196:-73507 Msa1388860:CDS
GAGAAAGAGCTCAAGGGATG+AGG 0.531478 tig0021196:-72649 Msa1388860:CDS
GATGTTGAATCACAATCTGT+TGG 0.531914 tig0021196:-73551 Msa1388860:CDS
AGAAAGAAGGCATTATAGAA+GGG 0.532131 tig0021196:-72532 Msa1388860:CDS
ACATCTAAGCACCGCAAGAA+AGG 0.532339 tig0021196:-74394 Msa1388860:CDS
GGAAGGAAGACCTTGAGGGA+TGG 0.533795 tig0021196:-73224 Msa1388860:CDS
TGAAGATAGAGATAGAGATA+GGG 0.536073 tig0021196:-73753 Msa1388860:CDS
CTGTCATTCATGAAAATAGC+AGG 0.536704 tig0021196:+72165 None:intergenic
ATTGATGCGGACTCTGGTAG+AGG 0.536751 tig0021196:-74094 Msa1388860:CDS
GAGAAGAGCTCTAGGGATGT+GGG 0.537490 tig0021196:-72936 Msa1388860:CDS
GAGGTAATGCTGCAGGAAAA+GGG 0.538469 tig0021196:-73892 Msa1388860:CDS
GAGGAGAAAGAAAGAACTCT+CGG 0.539758 tig0021196:-72977 Msa1388860:CDS
AACGACAGAGGTAATGCTGC+AGG 0.540250 tig0021196:-73899 Msa1388860:CDS
AGAGGGGATGATGAGTATCA+TGG 0.540257 tig0021196:-72603 Msa1388860:CDS
CCAAGAGGGTCTGGTACCAA+TGG 0.542448 tig0021196:-76552 Msa1388860:CDS
AAGGAAGAACTCAAGGGAAG+AGG 0.544319 tig0021196:-72721 Msa1388860:CDS
AAGAAAGCACTTAAGGGATG+AGG 0.545463 tig0021196:-72829 Msa1388860:CDS
GACTTGAGAAGCAGAAAACT+AGG 0.546480 tig0021196:-74129 Msa1388860:CDS
GGGAGGATTATGAAACAAGA+AGG 0.546874 tig0021196:-73511 Msa1388860:CDS
CAAGAGGGTCTGGTACCAAT+GGG 0.547119 tig0021196:-76551 Msa1388860:CDS
ACAGAGAGAGAAAGAGCTCA+AGG 0.548074 tig0021196:-72656 Msa1388860:CDS
GACACAAAGTGCCACAAGAA+GGG 0.549590 tig0021196:-74586 Msa1388860:CDS
AAGGAAGCACAGAAGGGAGT+AGG 0.549615 tig0021196:-72493 Msa1388860:exon
GAGAAAAGGAGCTCTAGGGA+TGG 0.550005 tig0021196:-73044 Msa1388860:CDS
ATGGGGATGATTATGAAGAA+AGG 0.550971 tig0021196:-73097 Msa1388860:CDS
GAAAAGGAGCTCTAGGGATG+GGG 0.552267 tig0021196:-73042 Msa1388860:CDS
AGTGATAGTGATCGCAGGTA+TGG 0.552398 tig0021196:-73977 Msa1388860:CDS
CATCCACCCTGCCTTTCTTG+CGG 0.553444 tig0021196:+74383 None:intergenic
TGCAGGAAGGAAGACCTTGA+GGG 0.553552 tig0021196:-73228 Msa1388860:CDS
CGCGTTCGAAATCGATAAAG+CGG 0.554558 tig0021196:+76857 None:intergenic
GAAGCACAAAACAGAAGGGA+TGG 0.557465 tig0021196:-72795 Msa1388860:CDS
CACCAACAAAATTGACCAGT+TGG 0.557535 tig0021196:+72240 None:intergenic
TACAGGAAGAAAGACCTTGA+GGG 0.558041 tig0021196:-72871 Msa1388860:CDS
GATGAAGGGGCTGGAAACGA+AGG 0.559192 tig0021196:-74742 Msa1388860:CDS
GCAAAGAAAGGAAGAACTCA+AGG 0.561372 tig0021196:-72728 Msa1388860:CDS
ATAGAGAAGCACAAAACAGA+AGG 0.562661 tig0021196:-72800 Msa1388860:CDS
CTACAGGAAGAAAGCACTTG+AGG 0.564894 tig0021196:-73301 Msa1388860:CDS
AGAATCCAATCCATCAACCT+TGG 0.565326 tig0021196:+73859 None:intergenic
CTAAAGCAGCTAGGATCAGA+GGG 0.565611 tig0021196:-73619 Msa1388860:CDS
ATGAGGATGATCGCAAAGAA+AGG 0.565805 tig0021196:-72740 Msa1388860:CDS
ATGAAGGCGTGCCCAGGCGT+AGG 0.565815 tig0021196:-74243 Msa1388860:CDS
GAAGATAAGCTGATTGATCA+GGG 0.567835 tig0021196:-76360 Msa1388860:CDS
AAGGTTGCTGAAAATATGAA+GGG 0.570610 tig0021196:-76486 Msa1388860:CDS
AAGAACTCTCGGGATGGTGA+TGG 0.570968 tig0021196:-72966 Msa1388860:CDS
TTCTTGAGCATGACCGAAAG+CGG 0.571093 tig0021196:-76410 Msa1388860:CDS
CGTGAAGCCGAGAACTTCGA+AGG 0.571228 tig0021196:-76505 Msa1388860:CDS
GCAAAGAAAGAAAGAACTCA+AGG 0.572016 tig0021196:-72692 Msa1388860:CDS
CAGTCGGAAGAAACAATTGG+AGG 0.572032 tig0021196:-74650 Msa1388860:CDS
GATTATGAAACAAGAAGGAA+GGG 0.574761 tig0021196:-73506 Msa1388860:CDS
AGGATTGAGGATGAACGTGC+AGG 0.578381 tig0021196:-73245 Msa1388860:CDS
AAGCACAAAACAGAAGGGAT+GGG 0.579129 tig0021196:-72794 Msa1388860:CDS
AAAAGCTTAAGAGATGAAGA+TGG 0.579544 tig0021196:-73362 Msa1388860:CDS
CCGAGGAGAGAAGAGCTCTA+GGG 0.580921 tig0021196:-72943 Msa1388860:CDS
ATGGAGAAAGAAAGCGCGGA+AGG 0.581208 tig0021196:-72584 Msa1388860:CDS
AGACACAAAGTGCCACAAGA+AGG 0.581820 tig0021196:-74587 Msa1388860:CDS
TATGGGAGAGATTATAAAGA+GGG 0.582883 tig0021196:-73824 Msa1388860:CDS
ATTCTGATAGTGATGCTAAG+AGG 0.583073 tig0021196:-74444 Msa1388860:CDS
AGGATCGAGGATGATCGTAC+AGG 0.583123 tig0021196:-72888 Msa1388860:CDS
TCAAGGGATGAGGATGTTCG+TGG 0.583178 tig0021196:-72639 Msa1388860:CDS
GCAATGGCCGTGGAGAGAAA+AGG 0.583518 tig0021196:-73058 Msa1388860:CDS
TGGAGAGAGAAGGCATGGAA+AGG 0.586417 tig0021196:-73336 Msa1388860:CDS
GTGGGGAAAGAAAGCACAGA+GGG 0.586721 tig0021196:-72620 Msa1388860:CDS
ACGGAGAAAGAAAGATCAGA+AGG 0.587778 tig0021196:-73265 Msa1388860:CDS
GGTCGTGGAGAGAGAAGGCA+TGG 0.587909 tig0021196:-73341 Msa1388860:CDS
AAGGGACGAGGAAGACCGAC+GGG 0.589493 tig0021196:-73390 Msa1388860:CDS
CTGATGAATTAAATACAGAT+GGG 0.590577 tig0021196:-74768 Msa1388860:CDS
CAAGGGATGAGGATGTTCGT+GGG 0.591261 tig0021196:-72638 Msa1388860:CDS
AATGAAAATGAAGAAAGAGA+TGG 0.593131 tig0021196:-73647 Msa1388860:CDS
ATCAGATTCATCACTACTGT+CGG 0.593798 tig0021196:+74465 None:intergenic
TACAGATGGGAATGATGAAG+GGG 0.594685 tig0021196:-74755 Msa1388860:CDS
AGAAGTCAAACAATAGCTAA+GGG 0.595420 tig0021196:-73791 Msa1388860:CDS
AGCGAAGAGAAGTGAGCCAA+AGG 0.596644 tig0021196:-73930 Msa1388860:CDS
ATAAAGTAAAGGCTGTAAGA+GGG 0.596806 tig0021196:-72458 Msa1388860:three_prime_UTR
AGTAAGAGGCATGATTCAGA+TGG 0.597582 tig0021196:-74280 Msa1388860:CDS
TTATACTGAGGCTGAGATTG+CGG 0.598508 tig0021196:-76337 Msa1388860:CDS
TGGAGAGAAAAGGAGCTCTA+GGG 0.599906 tig0021196:-73048 Msa1388860:CDS
AGAGCGGGAAAATAAAGTAA+AGG 0.599997 tig0021196:-72469 Msa1388860:three_prime_UTR
AGGAGAAAGAAAGAACTCTC+GGG 0.601526 tig0021196:-72976 Msa1388860:CDS
AGCACAAAACAGAAGGGATG+GGG 0.601555 tig0021196:-72793 Msa1388860:CDS
TGATTTCTCTTCTGATAGTG+AGG 0.602201 tig0021196:-74347 Msa1388860:CDS
ATAATCATCCCCATCCCTCA+AGG 0.602864 tig0021196:+73214 None:intergenic
CGGAGAAGCTTGAAGAGGCG+AGG 0.603883 tig0021196:-76317 Msa1388860:CDS
AAAGGGACGAGGAAGACCGA+CGG 0.606203 tig0021196:-73391 Msa1388860:CDS
ATGGTTATTCTAAAGCAGCT+AGG 0.608813 tig0021196:-73628 Msa1388860:CDS
ATTGGTACCAGACCCTCTTG+GGG 0.610172 tig0021196:+76554 None:intergenic
TCTCTGGATGGCAATGTCCG+TGG 0.610872 tig0021196:-73140 Msa1388860:CDS
GGAGATTCTGATCATCATGA+AGG 0.612338 tig0021196:-74259 Msa1388860:CDS
AGAAAGCACTTAAGGGATGA+GGG 0.614396 tig0021196:-72828 Msa1388860:CDS
GGAATCTGATGCTGATAGTG+AGG 0.614998 tig0021196:-74167 Msa1388860:CDS
AATACTGTGGTCCAGTAAGA+GGG 0.617358 tig0021196:-72365 Msa1388860:three_prime_UTR
ATGATGGTCATGGAGAAAGA+AGG 0.618260 tig0021196:-72545 Msa1388860:CDS
GAAAGGAAGAACTTAAGGGA+TGG 0.618658 tig0021196:-73080 Msa1388860:CDS
TTAAGAGATGAAGATGGTCG+TGG 0.619971 tig0021196:-73356 Msa1388860:CDS
AATCTGTTGGACGAATTGAT+CGG 0.619988 tig0021196:-73538 Msa1388860:CDS
AACTCCCAAGAGAAAGTACA+AGG 0.620318 tig0021196:-74560 Msa1388860:CDS
AAAATCGTCTTCATCCCTCA+AGG 0.623427 tig0021196:+72857 None:intergenic
GTGCAGGAAGGAAGACCTTG+AGG 0.624100 tig0021196:-73229 Msa1388860:CDS
AACAAAGACTAGAAGGATCG+AGG 0.625322 tig0021196:-72901 Msa1388860:CDS
ATCTGATTCAGATAGCAGTA+CGG 0.625946 tig0021196:-74530 Msa1388860:CDS
TGATAGTGATGCTAAGAGGA+AGG 0.626197 tig0021196:-74440 Msa1388860:CDS
GAAAGAAAGAACTCTCTGGA+TGG 0.626232 tig0021196:-73152 Msa1388860:CDS
TTTGTTGTCTTATGTTTCTG+CGG 0.626276 tig0021196:-72329 Msa1388860:three_prime_UTR
CTCAAGTGCTTTCTTCCTGT+AGG 0.626993 tig0021196:+73302 None:intergenic
TTGAGGATGAACGTGCAGGA+AGG 0.627354 tig0021196:-73241 Msa1388860:CDS
CAGAGAGAGAAAGAGCTCAA+GGG 0.628373 tig0021196:-72655 Msa1388860:CDS
ACAAAGTGCCACAAGAAGGG+TGG 0.628877 tig0021196:-74583 Msa1388860:CDS
ATCACTGCTACTCTCATCAG+AGG 0.629147 tig0021196:+74015 None:intergenic
GCAGCAGTGATAGTGATCGC+AGG 0.630849 tig0021196:-73982 Msa1388860:CDS
TGGAGAAAGGAAGCACAGAA+GGG 0.632562 tig0021196:-72499 Msa1388860:CDS
GTTGCTTTGAATGTACCCAT+TGG 0.633884 tig0021196:+76536 None:intergenic
ACAGAAGGGAGTAGGAAGAG+CGG 0.634481 tig0021196:-72485 Msa1388860:exon
TGGAGAAAGAAAGCGCGGAA+GGG 0.634848 tig0021196:-72583 Msa1388860:CDS
ATGAAGGGGCTGGAAACGAA+GGG 0.636206 tig0021196:-74741 Msa1388860:CDS
ATATGGGAGAGATTATAAAG+AGG 0.636317 tig0021196:-73825 Msa1388860:CDS
ACTTCACTAGTCCTACGCCT+GGG 0.636349 tig0021196:+74232 None:intergenic
CAAAACAGAAGGGATGGGGA+TGG 0.637014 tig0021196:-72789 Msa1388860:CDS
TATAGAAGGGATGATGATCG+TGG 0.640097 tig0021196:-72519 Msa1388860:CDS
AAGATGGTCGTGGAGAGAGA+AGG 0.641121 tig0021196:-73346 Msa1388860:CDS
GTAGGACTAGTGAAGTGAAG+AGG 0.641552 tig0021196:-74225 Msa1388860:CDS
TTGAGGGATGAAGATGATCA+CGG 0.641692 tig0021196:-73284 Msa1388860:CDS
ATCGGGTTACAAACCCCAAG+AGG 0.642712 tig0021196:-76567 Msa1388860:CDS
TGATGCTAAGAGGAAGGTCA+AGG 0.643266 tig0021196:-74434 Msa1388860:CDS
AGAGGCGAGGAATAACTTGG+AGG 0.647831 tig0021196:-76304 Msa1388860:CDS
GAAAAGAAGCTCTAAAGATG+GGG 0.648182 tig0021196:-73114 Msa1388860:CDS
TAGAGAAGCACAAAACAGAA+GGG 0.648296 tig0021196:-72799 Msa1388860:CDS
GTACAGGAAGAAAGACCTTG+AGG 0.650077 tig0021196:-72872 Msa1388860:CDS
CAAACATCATGATTCCGAAG+AGG 0.650482 tig0021196:-74188 Msa1388860:CDS
GAGGTATGGCTCTATTGATG+CGG 0.659250 tig0021196:-74107 Msa1388860:CDS
CAAAGAAAGAAAGAACTCAA+GGG 0.659434 tig0021196:-72691 Msa1388860:CDS
GAAAGAAAGAACTCTCGGGA+TGG 0.661874 tig0021196:-72972 Msa1388860:CDS
GCTGCAGCTGATGAAAACGA+TGG 0.664817 tig0021196:-76282 Msa1388860:CDS
TGGAAAGCATAAAAGGGACG+AGG 0.666249 tig0021196:-73402 Msa1388860:CDS
ACGAATTGATCGGAATAGGG+AGG 0.666293 tig0021196:-73528 Msa1388860:CDS
CAAAGAAAGGAAGAACTCAA+GGG 0.668656 tig0021196:-72727 Msa1388860:CDS
GTCGCGAACAATATGTACAA+CGG 0.669321 tig0021196:-76591 Msa1388860:exon
AAGGGATGAGGATGTTCGTG+GGG 0.670207 tig0021196:-72637 Msa1388860:CDS
GATTGCGGAGAAGCTTGAAG+AGG 0.675067 tig0021196:-76322 Msa1388860:CDS
AAGAGCTTAAGGGATGAGGG+TGG 0.676066 tig0021196:-73002 Msa1388860:CDS
TCGGGTTACAAACCCCAAGA+GGG 0.677908 tig0021196:-76566 Msa1388860:CDS
GATAGTGAGGAAGAGAAACA+TGG 0.678163 tig0021196:-74154 Msa1388860:CDS
AGGTTGCTGAAAATATGAAG+GGG 0.679407 tig0021196:-76485 Msa1388860:CDS
TTGAGAAGCAGAAAACTAGG+AGG 0.679981 tig0021196:-74126 Msa1388860:CDS
TAAGCACCGCAAGAAAGGCA+GGG 0.680248 tig0021196:-74389 Msa1388860:CDS
GGTCCAGTAAGAGGGATAGT+CGG 0.682996 tig0021196:-72357 Msa1388860:three_prime_UTR
AAGAACTTAAGGGATGGCAA+TGG 0.685392 tig0021196:-73074 Msa1388860:CDS
GAAGAGAAGTGAGCCAAAGG+AGG 0.686174 tig0021196:-73927 Msa1388860:CDS
AGCATGAAAACCAAATACTG+TGG 0.687045 tig0021196:-72378 Msa1388860:three_prime_UTR
AAGACAAACATGTTAAAAGG+CGG 0.697682 tig0021196:-74048 Msa1388860:CDS
GCACCGCAAGAAAGGCAGGG+TGG 0.701049 tig0021196:-74386 Msa1388860:CDS
TATCATGGAGAAAGAAAGCG+CGG 0.706879 tig0021196:-72588 Msa1388860:CDS
GATTGATCAGGGTTATACTG+AGG 0.707882 tig0021196:-76349 Msa1388860:CDS
AATGAAACTTCTGATCAGAG+AGG 0.718112 tig0021196:-73590 Msa1388860:CDS
GAGAGGCAGAAATTATAACA+GGG 0.720186 tig0021196:-73573 Msa1388860:CDS
AAGGAGGAAATAAACGACAG+AGG 0.720901 tig0021196:-73911 Msa1388860:CDS
AAGAACTTAAGGGATGAGGG+TGG 0.740111 tig0021196:-73182 Msa1388860:CDS
TGGGGAAAGAAAGCACAGAG+GGG 0.758387 tig0021196:-72619 Msa1388860:CDS
CGTGGGGAAAGAAAGCACAG+AGG 0.779210 tig0021196:-72621 Msa1388860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGATAATGATTATAAAA+GGG - tig0021196:75613-75632 Msa1388860:intron 10.0%
!! TTAAATTATTATTGGTATCA+AGG + tig0021196:73143-73162 None:intergenic 15.0%
!!! ATAGTTGATTCTTAAAAAAT+GGG + tig0021196:73564-73583 None:intergenic 15.0%
!!! TATAGTTGATTCTTAAAAAA+TGG + tig0021196:73565-73584 None:intergenic 15.0%
!!! ATATTTCAGATATTTTTTCA+TGG + tig0021196:74089-74108 None:intergenic 15.0%
!! TTCACAAAAAAAAATAGTTA+GGG + tig0021196:74157-74176 None:intergenic 15.0%
!! ATTCACAAAAAAAAATAGTT+AGG + tig0021196:74158-74177 None:intergenic 15.0%
!! ATCATTAACAAAAACTTATA+TGG - tig0021196:74204-74223 Msa1388860:CDS 15.0%
!!! ATTCTTTAAGAAAATCATAT+GGG - tig0021196:75252-75271 Msa1388860:intron 15.0%
!!! GAAATGATAATGATTATAAA+AGG - tig0021196:75612-75631 Msa1388860:intron 15.0%
!! TTTAACACTTTCTTAATAAT+AGG + tig0021196:76884-76903 None:intergenic 15.0%
!! ATTTCCGTTCTTTATAAATT+TGG - tig0021196:72317-72336 Msa1388860:three_prime_UTR 20.0%
!! TTTCCGTTCTTTATAAATTT+GGG - tig0021196:72318-72337 Msa1388860:three_prime_UTR 20.0%
!! AAACCCAAATTTATAAAGAA+CGG + tig0021196:72324-72343 None:intergenic 20.0%
!! GATGCAATTAACAAATTTAA+GGG + tig0021196:72395-72414 None:intergenic 20.0%
!! TGATGCAATTAACAAATTTA+AGG + tig0021196:72396-72415 None:intergenic 20.0%
!! ATCAATTTCTGTTGAAATTA+AGG - tig0021196:72434-72453 Msa1388860:three_prime_UTR 20.0%
!! TTAAATTATTATTGGCATCA+AGG + tig0021196:73006-73025 None:intergenic 20.0%
!! TCTTCTGACAAAAAAAATAT+TGG - tig0021196:73323-73342 Msa1388860:CDS 20.0%
!!! TCAATTTGTATTTTTTAGAC+TGG - tig0021196:73366-73385 Msa1388860:CDS 20.0%
!!! AAAACGTGTTTTTTTTTTTC+AGG - tig0021196:73496-73515 Msa1388860:CDS 20.0%
!!! AAACGTGTTTTTTTTTTTCA+GGG - tig0021196:73497-73516 Msa1388860:CDS 20.0%
!!! TGGCTTACTTTTTTTAAAAA+TGG - tig0021196:73630-73649 Msa1388860:CDS 20.0%
!! TAATGAATTAACTATTTCCA+CGG - tig0021196:73802-73821 Msa1388860:CDS 20.0%
!! TAAAAGAACATCATGATTAA+TGG + tig0021196:73911-73930 None:intergenic 20.0%
!! GAAAAAGAAAAAGAAAAAAC+AGG + tig0021196:74012-74031 None:intergenic 20.0%
!!! TATAAGTATTTAGAACAGAT+TGG + tig0021196:74040-74059 None:intergenic 20.0%
!! TCACAAAAAAAAATAGTTAG+GGG + tig0021196:74156-74175 None:intergenic 20.0%
!!! AGTTTTTGTTAATGATACTT+AGG + tig0021196:74200-74219 None:intergenic 20.0%
!!! AAAACTTATATGGAATTTTC+AGG - tig0021196:74214-74233 Msa1388860:CDS 20.0%
!! AAGTAATAAAAAACCAGTAA+AGG - tig0021196:74788-74807 Msa1388860:CDS 20.0%
!!! GATTCTTTAAGAAAATCATA+TGG - tig0021196:75251-75270 Msa1388860:intron 20.0%
!!! CTGATTCAGATATTATTTTG+GGG + tig0021196:72153-72172 None:intergenic 25.0%
!!! GCTGATTCAGATATTATTTT+GGG + tig0021196:72154-72173 None:intergenic 25.0%
!!! TGCTGATTCAGATATTATTT+TGG + tig0021196:72155-72174 None:intergenic 25.0%
! TTATGAATTAACTGTTTCCA+CGG - tig0021196:73297-73316 Msa1388860:CDS 25.0%
! CAAAAAAAATATTGGCATGT+TGG - tig0021196:73331-73350 Msa1388860:CDS 25.0%
!!! TTTTTCAAGCTTAACCAAAT+GGG + tig0021196:73456-73475 None:intergenic 25.0%
!!! TTTTTTCAAGCTTAACCAAA+TGG + tig0021196:73457-73476 None:intergenic 25.0%
!! GCTTGAAAAAAGTGATTTTA+AGG - tig0021196:73466-73485 Msa1388860:CDS 25.0%
! AATGAATTAACTATTTCCAC+GGG - tig0021196:73803-73822 Msa1388860:CDS 25.0%
! ACTCTTCTGACAAAAATTAT+TGG - tig0021196:73826-73845 Msa1388860:CDS 25.0%
!!! GATTATTTTAAGCTCTGTTT+GGG + tig0021196:73983-74002 None:intergenic 25.0%
!!! TGATTATTTTAAGCTCTGTT+TGG + tig0021196:73984-74003 None:intergenic 25.0%
! TTATAAATGCAGTTACAGAA+AGG - tig0021196:74124-74143 Msa1388860:CDS 25.0%
! CTGATGAATTAAATACAGAT+GGG - tig0021196:74325-74344 Msa1388860:CDS 25.0%
! AATGAAAATGAAGAAAGAGA+TGG - tig0021196:75446-75465 Msa1388860:intron 25.0%
! TAATGATTATAAAAGGGATC+AGG - tig0021196:75619-75638 Msa1388860:intron 25.0%
!!! TTCCATGTTTTTTTTCTTCA+TGG + tig0021196:75649-75668 None:intergenic 25.0%
! ATGAAGAAAAAAAACATGGA+AGG - tig0021196:75648-75667 Msa1388860:intron 25.0%
!!! AACATTGTATTTGGTTTTCT+GGG + tig0021196:76679-76698 None:intergenic 25.0%
!!! AAACATTGTATTTGGTTTTC+TGG + tig0021196:76680-76699 None:intergenic 25.0%
! TGAACTGAAAACATTGTATT+TGG + tig0021196:76688-76707 None:intergenic 25.0%
!! ATACAATGTTTTCAGTTCAA+AGG - tig0021196:76689-76708 Msa1388860:intron 25.0%
! TCTCTCTTCTTTCTTTTCTA+CGG - tig0021196:72267-72286 Msa1388860:three_prime_UTR 30.0%
AACAATATGTACAACGGAAT+CGG - tig0021196:72508-72527 Msa1388860:CDS 30.0%
AAGGTTGCTGAAAATATGAA+GGG - tig0021196:72607-72626 Msa1388860:CDS 30.0%
AAACACTCACTTATCCATAT+TGG + tig0021196:72839-72858 None:intergenic 30.0%
! ATATGGATAAGTGAGTGTTT+TGG - tig0021196:72839-72858 Msa1388860:CDS 30.0%
!! TGGATTTTGATAGTTGTGTT+AGG - tig0021196:72859-72878 Msa1388860:CDS 30.0%
! ATTGTTGGTTAGCATGATAT+TGG - tig0021196:72957-72976 Msa1388860:CDS 30.0%
!! TAAGTGGTTAGTTTCATGTT+AGG - tig0021196:73268-73287 Msa1388860:CDS 30.0%
!! AAGTGGTTAGTTTCATGTTA+GGG - tig0021196:73269-73288 Msa1388860:CDS 30.0%
TATGAATTAACTGTTTCCAC+GGG - tig0021196:73298-73317 Msa1388860:CDS 30.0%
ATGCAATTAGACATAGTTTC+AGG - tig0021196:73415-73434 Msa1388860:CDS 30.0%
TGCAATTAGACATAGTTTCA+GGG - tig0021196:73416-73435 Msa1388860:CDS 30.0%
! GTTGATTCTTAAAAAATGGG+TGG + tig0021196:73561-73580 None:intergenic 30.0%
AACTATAAGTAGTTTCCTGA+GGG - tig0021196:73578-73597 Msa1388860:CDS 30.0%
!! AGTGGTTAGTTTCATATTAG+AGG - tig0021196:73758-73777 Msa1388860:CDS 30.0%
GACAAAAATTATTGGCATGT+TGG - tig0021196:73834-73853 Msa1388860:CDS 30.0%
GCTGATGAATTAAATACAGA+TGG - tig0021196:74324-74343 Msa1388860:CDS 30.0%
! GTCTTTAACACTCTTTTTCT+TGG + tig0021196:74490-74509 None:intergenic 30.0%
GACAAGACAAACATGTTAAA+AGG - tig0021196:75042-75061 Msa1388860:intron 30.0%
AAGACAAACATGTTAAAAGG+CGG - tig0021196:75045-75064 Msa1388860:intron 30.0%
TATGGAAGAACTAGAAAAGT+TGG - tig0021196:75134-75153 Msa1388860:intron 30.0%
ATGGAAGAACTAGAAAAGTT+GGG - tig0021196:75135-75154 Msa1388860:intron 30.0%
ATATGGGAGAGATTATAAAG+AGG - tig0021196:75268-75287 Msa1388860:intron 30.0%
TATGGGAGAGATTATAAAGA+GGG - tig0021196:75269-75288 Msa1388860:intron 30.0%
!! ATTGTTTGACTTCTAGAATC+TGG + tig0021196:75296-75315 None:intergenic 30.0%
TAGAAGTCAAACAATAGCTA+AGG - tig0021196:75301-75320 Msa1388860:intron 30.0%
AGAAGTCAAACAATAGCTAA+GGG - tig0021196:75302-75321 Msa1388860:intron 30.0%
ATGAAGATAGAGATAGAGAT+AGG - tig0021196:75339-75358 Msa1388860:intron 30.0%
TGAAGATAGAGATAGAGATA+GGG - tig0021196:75340-75359 Msa1388860:intron 30.0%
!! GTCAAATTTGCTAAGAATGA+TGG - tig0021196:75368-75387 Msa1388860:intron 30.0%
GATTATGAAACAAGAAGGAA+GGG - tig0021196:75587-75606 Msa1388860:intron 30.0%
GACCATGAAGAAAAAAAACA+TGG - tig0021196:75644-75663 Msa1388860:intron 30.0%
AATGAAGATGATTCAAGAGA+TGG - tig0021196:75671-75690 Msa1388860:intron 30.0%
! AAGAGATGGAAAGCATAAAA+GGG - tig0021196:75685-75704 Msa1388860:intron 30.0%
AAAAGCTTAAGAGATGAAGA+TGG - tig0021196:75731-75750 Msa1388860:intron 30.0%
ATGGAGAAAGAAAGAACTTA+AGG - tig0021196:75900-75919 Msa1388860:intron 30.0%
TGGAGAAAGAAAGAACTTAA+GGG - tig0021196:75901-75920 Msa1388860:intron 30.0%
!! AGAAAAGAAGCTCTAAAGAT+GGG - tig0021196:75978-75997 Msa1388860:intron 30.0%
ATGAAGAAAGGAAGAACTTA+AGG - tig0021196:76008-76027 Msa1388860:intron 30.0%
TGAAGAAAGGAAGAACTTAA+GGG - tig0021196:76009-76028 Msa1388860:intron 30.0%
TTAGAGAAACAAAGACTAGA+AGG - tig0021196:76185-76204 Msa1388860:intron 30.0%
GTGTAGAAATAAAGAACTCT+AGG - tig0021196:76329-76348 Msa1388860:CDS 30.0%
AATAAAGAACTCTAGGTATG+AGG - tig0021196:76336-76355 Msa1388860:CDS 30.0%
TTGAGTTCTTTCTTTCTTTG+CGG + tig0021196:76402-76421 None:intergenic 30.0%
CAAAGAAAGAAAGAACTCAA+GGG - tig0021196:76402-76421 Msa1388860:CDS 30.0%
!! AGAAAGAAGGCATTATAGAA+GGG - tig0021196:76561-76580 Msa1388860:CDS 30.0%
AATAAAGTAAAGGCTGTAAG+AGG - tig0021196:76634-76653 Msa1388860:intron 30.0%
ATAAAGTAAAGGCTGTAAGA+GGG - tig0021196:76635-76654 Msa1388860:intron 30.0%
! TTTGTTGTCTTATGTTTCTG+CGG - tig0021196:76764-76783 Msa1388860:intron 30.0%
AGTGTTAAATGTTCCAAGAT+TGG - tig0021196:76895-76914 Msa1388860:five_prime_UTR 30.0%
AGGATCAATATATCCAATCT+TGG + tig0021196:76911-76930 None:intergenic 30.0%
AGGTTTCTGATATACGTTTC+TGG - tig0021196:72454-72473 Msa1388860:three_prime_UTR 35.0%
GGTTTCTGATATACGTTTCT+GGG - tig0021196:72455-72474 Msa1388860:three_prime_UTR 35.0%
GTTTCTGATATACGTTTCTG+GGG - tig0021196:72456-72475 Msa1388860:three_prime_UTR 35.0%
ACAATATGTACAACGGAATC+GGG - tig0021196:72509-72528 Msa1388860:CDS 35.0%
GAAGGTTGCTGAAAATATGA+AGG - tig0021196:72606-72625 Msa1388860:CDS 35.0%
AGGTTGCTGAAAATATGAAG+GGG - tig0021196:72608-72627 Msa1388860:CDS 35.0%
TGAAAATATGAAGGGGTTTG+AGG - tig0021196:72615-72634 Msa1388860:CDS 35.0%
GAAAATATGAAGGGGTTTGA+GGG - tig0021196:72616-72635 Msa1388860:CDS 35.0%
TGAAGATAAGCTGATTGATC+AGG - tig0021196:72732-72751 Msa1388860:CDS 35.0%
GAAGATAAGCTGATTGATCA+GGG - tig0021196:72733-72752 Msa1388860:CDS 35.0%
TGAAAACGATGGATCCAATA+TGG - tig0021196:72822-72841 Msa1388860:CDS 35.0%
TGTTAGGATTGTTTGATGTG+TGG - tig0021196:72875-72894 Msa1388860:CDS 35.0%
GTTAGGATTGTTTGATGTGT+GGG - tig0021196:72876-72895 Msa1388860:CDS 35.0%
! ATTATTGGCATCAAGGTGTT+CGG + tig0021196:72999-73018 None:intergenic 35.0%
!! AGTGGTTAGTTTCATGTTAG+GGG - tig0021196:73270-73289 Msa1388860:CDS 35.0%
! GTTGTTGTGTGTGATTTTAG+AGG - tig0021196:73388-73407 Msa1388860:CDS 35.0%
GCAATTAGACATAGTTTCAG+GGG - tig0021196:73417-73436 Msa1388860:CDS 35.0%
CAATTAGACATAGTTTCAGG+GGG - tig0021196:73418-73437 Msa1388860:CDS 35.0%
CAACTATAAGTAGTTTCCTG+AGG - tig0021196:73577-73596 Msa1388860:CDS 35.0%
TATGTTTAGATGGAGGGTTT+AGG - tig0021196:73601-73620 Msa1388860:CDS 35.0%
ATGTTTAGATGGAGGGTTTA+GGG - tig0021196:73602-73621 Msa1388860:CDS 35.0%
!! GGTTAGTTTCATATTAGAGG+CGG - tig0021196:73761-73780 Msa1388860:CDS 35.0%
TATTAGAGGCGGTTTATGAA+TGG - tig0021196:73772-73791 Msa1388860:CDS 35.0%
! ATTTTAAGCTCTGTTTGGGA+AGG + tig0021196:73979-73998 None:intergenic 35.0%
! TTTCCTTTCTAGCAGCAATT+TGG + tig0021196:74260-74279 None:intergenic 35.0%
TGCTAGAAAGGAAAAACAGA+TGG - tig0021196:74266-74285 Msa1388860:CDS 35.0%
AATACAGATGGGAATGATGA+AGG - tig0021196:74336-74355 Msa1388860:CDS 35.0%
ATACAGATGGGAATGATGAA+GGG - tig0021196:74337-74356 Msa1388860:CDS 35.0%
! GAAACCTGAACATTCCTTTT+TGG - tig0021196:74410-74429 Msa1388860:CDS 35.0%
ACTGAAATCTCTGTCCAAAA+AGG + tig0021196:74427-74446 None:intergenic 35.0%
! TTTTGGACAGAGATTTCAGT+CGG - tig0021196:74427-74446 Msa1388860:CDS 35.0%
TTTCAGTCGGAAGAAACAAT+TGG - tig0021196:74440-74459 Msa1388860:CDS 35.0%
TCATCCTTGTACTTTCTCTT+GGG + tig0021196:74540-74559 None:intergenic 35.0%
ATCATCCTTGTACTTTCTCT+TGG + tig0021196:74541-74560 None:intergenic 35.0%
ATCTGATTCAGATAGCAGTA+CGG - tig0021196:74563-74582 Msa1388860:CDS 35.0%
ATGATGAGAAAACAGGTAGA+AGG - tig0021196:74586-74605 Msa1388860:CDS 35.0%
ATCAGATTCATCACTACTGT+CGG + tig0021196:74631-74650 None:intergenic 35.0%
! ATTCTGATAGTGATGCTAAG+AGG - tig0021196:74649-74668 Msa1388860:CDS 35.0%
! TGATTTCTCTTCTGATAGTG+AGG - tig0021196:74746-74765 Msa1388860:CDS 35.0%
AAAAGGGAAAAATAGTGCCA+AGG - tig0021196:75217-75236 Msa1388860:intron 35.0%
AAAAATAGTGCCAAGGTTGA+TGG - tig0021196:75224-75243 Msa1388860:intron 35.0%
!! CTAAGAATGATGGACAAGAT+AGG - tig0021196:75378-75397 Msa1388860:intron 35.0%
!! ATGGTTATTCTAAAGCAGCT+AGG - tig0021196:75465-75484 Msa1388860:intron 35.0%
AATGAAACTTCTGATCAGAG+AGG - tig0021196:75503-75522 Msa1388860:intron 35.0%
AGAGAGGCAGAAATTATAAC+AGG - tig0021196:75519-75538 Msa1388860:intron 35.0%
GAGAGGCAGAAATTATAACA+GGG - tig0021196:75520-75539 Msa1388860:intron 35.0%
GATGTTGAATCACAATCTGT+TGG - tig0021196:75542-75561 Msa1388860:intron 35.0%
AATCTGTTGGACGAATTGAT+CGG - tig0021196:75555-75574 Msa1388860:intron 35.0%
GGATTATGAAACAAGAAGGA+AGG - tig0021196:75586-75605 Msa1388860:intron 35.0%
! CAAGAGATGGAAAGCATAAA+AGG - tig0021196:75684-75703 Msa1388860:intron 35.0%
AAGGATGAAGATTATCCTAC+AGG - tig0021196:75776-75795 Msa1388860:intron 35.0%
AAGAAAGATCAGAAGGATTG+AGG - tig0021196:75835-75854 Msa1388860:intron 35.0%
AAGAAAGAACTTAAGGGATG+AGG - tig0021196:75907-75926 Msa1388860:intron 35.0%
AGAAAGAACTTAAGGGATGA+GGG - tig0021196:75908-75927 Msa1388860:intron 35.0%
TAGAGAAAGAAAGAACTCTC+TGG - tig0021196:75937-75956 Msa1388860:intron 35.0%
!! GAGAAAAGAAGCTCTAAAGA+TGG - tig0021196:75977-75996 Msa1388860:intron 35.0%
!! GAAAAGAAGCTCTAAAGATG+GGG - tig0021196:75979-75998 Msa1388860:intron 35.0%
ATGGGGATGATTATGAAGAA+AGG - tig0021196:75996-76015 Msa1388860:intron 35.0%
ATGGAGAAAGAAAGAGCTTA+AGG - tig0021196:76080-76099 Msa1388860:intron 35.0%
TGGAGAAAGAAAGAGCTTAA+GGG - tig0021196:76081-76100 Msa1388860:intron 35.0%
!! TTGGAGAAAGAAAGCACTTA+AGG - tig0021196:76257-76276 Msa1388860:intron 35.0%
!! TGGAGAAAGAAAGCACTTAA+GGG - tig0021196:76258-76277 Msa1388860:intron 35.0%
! ATAGAGAAGCACAAAACAGA+AGG - tig0021196:76293-76312 Msa1388860:CDS 35.0%
! TAGAGAAGCACAAAACAGAA+GGG - tig0021196:76294-76313 Msa1388860:CDS 35.0%
CAAAGAAAGGAAGAACTCAA+GGG - tig0021196:76366-76385 Msa1388860:CDS 35.0%
GCAAAGAAAGAAAGAACTCA+AGG - tig0021196:76401-76420 Msa1388860:CDS 35.0%
! GATGATGATGATGATGATGA+TGG - tig0021196:76532-76551 Msa1388860:CDS 35.0%
!! GAGAAAGAAGGCATTATAGA+AGG - tig0021196:76560-76579 Msa1388860:CDS 35.0%
AGAGCGGGAAAATAAAGTAA+AGG - tig0021196:76624-76643 Msa1388860:intron 35.0%
AGCATGAAAACCAAATACTG+TGG - tig0021196:76715-76734 Msa1388860:intron 35.0%
!! ATTTCAAGTTGAGTTCCAAC+TGG - tig0021196:76838-76857 Msa1388860:five_prime_UTR 35.0%
! TTCCAACTGGTCAATTTTGT+TGG - tig0021196:76851-76870 Msa1388860:five_prime_UTR 35.0%
CTGTCATTCATGAAAATAGC+AGG + tig0021196:76931-76950 None:intergenic 35.0%
TTCAAGCGTAGAACACGAAA+GGG + tig0021196:72358-72377 None:intergenic 40.0%
ATTCAAGCGTAGAACACGAA+AGG + tig0021196:72359-72378 None:intergenic 40.0%
GTCGCGAACAATATGTACAA+CGG - tig0021196:72502-72521 Msa1388860:CDS 40.0%
! GTTGCTTTGAATGTACCCAT+TGG + tig0021196:72560-72579 None:intergenic 40.0%
! TACTGCTGGTGTTAGTAGAA+AGG - tig0021196:72648-72667 Msa1388860:CDS 40.0%
GATTGATCAGGGTTATACTG+AGG - tig0021196:72744-72763 Msa1388860:CDS 40.0%
TTATACTGAGGCTGAGATTG+CGG - tig0021196:72756-72775 Msa1388860:CDS 40.0%
CGATGCTCTCTATGAATTGT+TGG - tig0021196:72942-72961 Msa1388860:CDS 40.0%
CGATGCTCTCTATGTATTGT+TGG - tig0021196:73073-73092 Msa1388860:CDS 40.0%
! TCACTTTCGATGAGAAGTGT+GGG - tig0021196:73214-73233 Msa1388860:CDS 40.0%
GTCTGTGGGTTTGAATTAAG+TGG - tig0021196:73252-73271 Msa1388860:CDS 40.0%
!! TTGTGTGTGATTTTAGAGGC+TGG - tig0021196:73392-73411 Msa1388860:CDS 40.0%
AGTTTCAGGGGGTAATGTTA+AGG - tig0021196:73429-73448 Msa1388860:CDS 40.0%
GTTTCAGGGGGTAATGTTAA+GGG - tig0021196:73430-73449 Msa1388860:CDS 40.0%
! TTCCTGAGGGTATGTTTAGA+TGG - tig0021196:73591-73610 Msa1388860:CDS 40.0%
! TGAGGGTATGTTTAGATGGA+GGG - tig0021196:73595-73614 Msa1388860:CDS 40.0%
CAAACCCACAGACTAAAACT+CGG + tig0021196:73733-73752 None:intergenic 40.0%
GTCTGTGGGTTTGAATTAAG+TGG - tig0021196:73252-73271 Msa1388860:CDS 40.0%
TCACCAAATTGCTGCTAGAA+AGG - tig0021196:74254-74273 Msa1388860:CDS 40.0%
GAAACATTGAAAGCTGCTCT+TGG - tig0021196:74288-74307 Msa1388860:CDS 40.0%
TACAGATGGGAATGATGAAG+GGG - tig0021196:74338-74357 Msa1388860:CDS 40.0%
CTGTCCAAAAAGGAATGTTC+AGG + tig0021196:74417-74436 None:intergenic 40.0%
! AACTCCCAAGAGAAAGTACA+AGG - tig0021196:74533-74552 Msa1388860:CDS 40.0%
AGTACGGATGATGAGAAAAC+AGG - tig0021196:74579-74598 Msa1388860:CDS 40.0%
! TGATAGTGATGCTAAGAGGA+AGG - tig0021196:74653-74672 Msa1388860:CDS 40.0%
AACCAGTAAAGGCTAGTAAG+AGG - tig0021196:74799-74818 Msa1388860:CDS 40.0%
! AGTAAGAGGCATGATTCAGA+TGG - tig0021196:74813-74832 Msa1388860:CDS 40.0%
GGAGATTCTGATCATCATGA+AGG - tig0021196:74834-74853 Msa1388860:CDS 40.0%
CAAACATCATGATTCCGAAG+AGG - tig0021196:74905-74924 Msa1388860:intron 40.0%
ATCAGCATCAGATTCCTCTT+CGG + tig0021196:74922-74941 None:intergenic 40.0%
GATAGTGAGGAAGAGAAACA+TGG - tig0021196:74939-74958 Msa1388860:intron 40.0%
GACTTGAGAAGCAGAAAACT+AGG - tig0021196:74964-74983 Msa1388860:intron 40.0%
TTGAGAAGCAGAAAACTAGG+AGG - tig0021196:74967-74986 Msa1388860:intron 40.0%
AAGCAGAAAACTAGGAGGTA+TGG - tig0021196:74972-74991 Msa1388860:intron 40.0%
! AGTAGCAGTGATAGTGAAAC+TGG - tig0021196:75089-75108 Msa1388860:intron 40.0%
! CTGTCGTTTATTTCCTCCTT+TGG + tig0021196:75182-75201 None:intergenic 40.0%
AAGGAGGAAATAAACGACAG+AGG - tig0021196:75182-75201 Msa1388860:intron 40.0%
AGAATCCAATCCATCAACCT+TGG + tig0021196:75237-75256 None:intergenic 40.0%
GATGGACAAGATAGGAAGTT+TGG - tig0021196:75386-75405 Msa1388860:intron 40.0%
TTGGACGAATTGATCGGAAT+AGG - tig0021196:75561-75580 Msa1388860:intron 40.0%
TGGACGAATTGATCGGAATA+GGG - tig0021196:75562-75581 Msa1388860:intron 40.0%
GGGAGGATTATGAAACAAGA+AGG - tig0021196:75582-75601 Msa1388860:intron 40.0%
! TTAAGCTTTTCTTCTCCCGT+CGG + tig0021196:75721-75740 None:intergenic 40.0%
TTAAGAGATGAAGATGGTCG+TGG - tig0021196:75737-75756 Msa1388860:intron 40.0%
!! TACAGGAAGAAAGCACTTGA+GGG - tig0021196:75793-75812 Msa1388860:intron 40.0%
TTGAGGGATGAAGATGATCA+CGG - tig0021196:75809-75828 Msa1388860:intron 40.0%
ACGGAGAAAGAAAGATCAGA+AGG - tig0021196:75828-75847 Msa1388860:intron 40.0%
GAAAGAAAGAACTCTCTGGA+TGG - tig0021196:75941-75960 Msa1388860:intron 40.0%
! TAGAGCTTCTTTTCTCTCCA+CGG + tig0021196:75973-75992 None:intergenic 40.0%
GAAAGGAAGAACTTAAGGGA+TGG - tig0021196:76013-76032 Msa1388860:intron 40.0%
AAGAACTTAAGGGATGGCAA+TGG - tig0021196:76019-76038 Msa1388860:intron 40.0%
AAGAAAGAGCTTAAGGGATG+AGG - tig0021196:76087-76106 Msa1388860:intron 40.0%
AGAAAGAGCTTAAGGGATGA+GGG - tig0021196:76088-76107 Msa1388860:intron 40.0%
GAGGAGAAAGAAAGAACTCT+CGG - tig0021196:76116-76135 Msa1388860:intron 40.0%
AGGAGAAAGAAAGAACTCTC+GGG - tig0021196:76117-76136 Msa1388860:intron 40.0%
AACAAAGACTAGAAGGATCG+AGG - tig0021196:76192-76211 Msa1388860:intron 40.0%
TACAGGAAGAAAGACCTTGA+GGG - tig0021196:76222-76241 Msa1388860:intron 40.0%
AAAATCGTCTTCATCCCTCA+AGG + tig0021196:76239-76258 None:intergenic 40.0%
! TTGAGGGATGAAGACGATTT+TGG - tig0021196:76238-76257 Msa1388860:intron 40.0%
!! AAGAAAGCACTTAAGGGATG+AGG - tig0021196:76264-76283 Msa1388860:intron 40.0%
!! AGAAAGCACTTAAGGGATGA+GGG - tig0021196:76265-76284 Msa1388860:intron 40.0%
AAGCACAAAACAGAAGGGAT+GGG - tig0021196:76299-76318 Msa1388860:CDS 40.0%
ATGAGGATGATCGCAAAGAA+AGG - tig0021196:76353-76372 Msa1388860:CDS 40.0%
GCAAAGAAAGGAAGAACTCA+AGG - tig0021196:76365-76384 Msa1388860:CDS 40.0%
TATCATGGAGAAAGAAAGCG+CGG - tig0021196:76505-76524 Msa1388860:CDS 40.0%
!! GATGATGATGATGATGGTCA+TGG - tig0021196:76538-76557 Msa1388860:CDS 40.0%
ATGATGGTCATGGAGAAAGA+AGG - tig0021196:76548-76567 Msa1388860:CDS 40.0%
TATAGAAGGGATGATGATCG+TGG - tig0021196:76574-76593 Msa1388860:CDS 40.0%
TCTTACTGGACCACAGTATT+TGG + tig0021196:76728-76747 None:intergenic 40.0%
AAATACTGTGGTCCAGTAAG+AGG - tig0021196:76727-76746 Msa1388860:intron 40.0%
AATACTGTGGTCCAGTAAGA+GGG - tig0021196:76728-76747 Msa1388860:intron 40.0%
CACCAACAAAATTGACCAGT+TGG + tig0021196:76856-76875 None:intergenic 40.0%
CGCGTTCGAAATCGATAAAG+CGG + tig0021196:72239-72258 None:intergenic 45.0%
TCAGCAACCTTCGAAGTTCT+CGG + tig0021196:72598-72617 None:intergenic 45.0%
TTCTTGAGCATGACCGAAAG+CGG - tig0021196:72683-72702 Msa1388860:CDS 45.0%
TGAAGAGGCGAGGAATAACT+TGG - tig0021196:72786-72805 Msa1388860:CDS 45.0%
CTCACTTTCGATGAGAAGTG+TGG - tig0021196:73213-73232 Msa1388860:CDS 45.0%
!! GGTTAGTTTCATGTTAGGGG+CGG - tig0021196:73273-73292 Msa1388860:CDS 45.0%
! TTTTTGTCAGAAGAGTCCCG+TGG + tig0021196:73317-73336 None:intergenic 45.0%
GGTAATGTTAAGGGCCCATT+TGG - tig0021196:73439-73458 Msa1388860:CDS 45.0%
CTCCATCTAAACATACCCTC+AGG + tig0021196:73596-73615 None:intergenic 45.0%
! CTGAGGGTATGTTTAGATGG+AGG - tig0021196:73594-73613 Msa1388860:CDS 45.0%
TTTAGATGGAGGGTTTAGGG+CGG - tig0021196:73605-73624 Msa1388860:CDS 45.0%
TGTGTCAGTGTTGTGTACAC+AGG - tig0021196:73677-73696 Msa1388860:CDS 45.0%
!! TGCTACCGAGTTTTAGTCTG+TGG - tig0021196:73725-73744 Msa1388860:CDS 45.0%
!! GCTACCGAGTTTTAGTCTGT+GGG - tig0021196:73726-73745 Msa1388860:CDS 45.0%
! TTTTTGTCAGAAGAGTCCCG+TGG + tig0021196:73317-73336 None:intergenic 45.0%
CAGTCGGAAGAAACAATTGG+AGG - tig0021196:74443-74462 Msa1388860:CDS 45.0%
! AGACACAAAGTGCCACAAGA+AGG - tig0021196:74506-74525 Msa1388860:CDS 45.0%
! GACACAAAGTGCCACAAGAA+GGG - tig0021196:74507-74526 Msa1388860:CDS 45.0%
TGATGCTAAGAGGAAGGTCA+AGG - tig0021196:74659-74678 Msa1388860:CDS 45.0%
! ACATCTAAGCACCGCAAGAA+AGG - tig0021196:74699-74718 Msa1388860:CDS 45.0%
!! TGCCTCTTACTAGCCTTTAC+TGG + tig0021196:74804-74823 None:intergenic 45.0%
! GTAGGACTAGTGAAGTGAAG+AGG - tig0021196:74868-74887 Msa1388860:intron 45.0%
! GGAATCTGATGCTGATAGTG+AGG - tig0021196:74926-74945 Msa1388860:intron 45.0%
! GAGGTATGGCTCTATTGATG+CGG - tig0021196:74986-75005 Msa1388860:intron 45.0%
ATCACTGCTACTCTCATCAG+AGG + tig0021196:75081-75100 None:intergenic 45.0%
! AGTGATAGTGATCGCAGGTA+TGG - tig0021196:75116-75135 Msa1388860:intron 45.0%
AGAGGTAATGCTGCAGGAAA+AGG - tig0021196:75200-75219 Msa1388860:intron 45.0%
GAGGTAATGCTGCAGGAAAA+GGG - tig0021196:75201-75220 Msa1388860:intron 45.0%
!! TAGTGCCAAGGTTGATGGAT+TGG - tig0021196:75229-75248 Msa1388860:intron 45.0%
! TCTAAAGCAGCTAGGATCAG+AGG - tig0021196:75473-75492 Msa1388860:intron 45.0%
CTAAAGCAGCTAGGATCAGA+GGG - tig0021196:75474-75493 Msa1388860:intron 45.0%
ACGAATTGATCGGAATAGGG+AGG - tig0021196:75565-75584 Msa1388860:intron 45.0%
! TGGAAAGCATAAAAGGGACG+AGG - tig0021196:75691-75710 Msa1388860:intron 45.0%
CTCAAGTGCTTTCTTCCTGT+AGG + tig0021196:75794-75813 None:intergenic 45.0%
!! CTACAGGAAGAAAGCACTTG+AGG - tig0021196:75792-75811 Msa1388860:intron 45.0%
ATAATCATCCCCATCCCTCA+AGG + tig0021196:75882-75901 None:intergenic 45.0%
TTGAGGGATGGGGATGATTA+TGG - tig0021196:75881-75900 Msa1388860:intron 45.0%
AAGAACTTAAGGGATGAGGG+TGG - tig0021196:75911-75930 Msa1388860:intron 45.0%
! TAGAGCTCCTTTTCTCTCCA+CGG + tig0021196:76045-76064 None:intergenic 45.0%
TGGAGAGAAAAGGAGCTCTA+GGG - tig0021196:76045-76064 Msa1388860:intron 45.0%
!! AGAAAAGGAGCTCTAGGGAT+GGG - tig0021196:76050-76069 Msa1388860:intron 45.0%
TCTAGGGATGGGGATGATTA+TGG - tig0021196:76061-76080 Msa1388860:intron 45.0%
GAAAGAAAGAACTCTCGGGA+TGG - tig0021196:76121-76140 Msa1388860:intron 45.0%
GTACAGGAAGAAAGACCTTG+AGG - tig0021196:76221-76240 Msa1388860:intron 45.0%
GAAGCACAAAACAGAAGGGA+TGG - tig0021196:76298-76317 Msa1388860:CDS 45.0%
AGCACAAAACAGAAGGGATG+GGG - tig0021196:76300-76319 Msa1388860:CDS 45.0%
AAGGAAGAACTCAAGGGAAG+AGG - tig0021196:76372-76391 Msa1388860:CDS 45.0%
ACAGAGAGAGAAAGAGCTCA+AGG - tig0021196:76437-76456 Msa1388860:CDS 45.0%
CAGAGAGAGAAAGAGCTCAA+GGG - tig0021196:76438-76457 Msa1388860:CDS 45.0%
AGAGGGGATGATGAGTATCA+TGG - tig0021196:76490-76509 Msa1388860:CDS 45.0%
! TGGAGAAAGGAAGCACAGAA+GGG - tig0021196:76594-76613 Msa1388860:exon 45.0%
! ATACCGACTATCCCTCTTAC+TGG + tig0021196:76742-76761 None:intergenic 45.0%
!!! TAATTTTCTTAAATTATTAT+TGG + tig0021196:73014-73033 None:intergenic 5.0%
!!! TAATTTTCTTAAATTATTAT+TGG + tig0021196:73014-73033 None:intergenic 5.0%
ATCGGGTTACAAACCCCAAG+AGG - tig0021196:72526-72545 Msa1388860:CDS 50.0%
TCGGGTTACAAACCCCAAGA+GGG - tig0021196:72527-72546 Msa1388860:CDS 50.0%
TTACAAACCCCAAGAGGGTC+TGG - tig0021196:72532-72551 Msa1388860:CDS 50.0%
ATTGGTACCAGACCCTCTTG+GGG + tig0021196:72542-72561 None:intergenic 50.0%
CATTGGTACCAGACCCTCTT+GGG + tig0021196:72543-72562 None:intergenic 50.0%
CAAGAGGGTCTGGTACCAAT+GGG - tig0021196:72542-72561 Msa1388860:CDS 50.0%
AAGGGGTTTGAGGGAGATCA+AGG - tig0021196:72625-72644 Msa1388860:CDS 50.0%
!! TCAGCTGAATCTGCCGCTTT+CGG + tig0021196:72699-72718 None:intergenic 50.0%
GATTGCGGAGAAGCTTGAAG+AGG - tig0021196:72771-72790 Msa1388860:CDS 50.0%
AGAGGCGAGGAATAACTTGG+AGG - tig0021196:72789-72808 Msa1388860:CDS 50.0%
GCTGCAGCTGATGAAAACGA+TGG - tig0021196:72811-72830 Msa1388860:CDS 50.0%
! TTCGATGAGAAGTGTGGGTG+CGG - tig0021196:73219-73238 Msa1388860:CDS 50.0%
! TGCGGCAGAGTTTTTGTCTG+TGG - tig0021196:73237-73256 Msa1388860:CDS 50.0%
! GCGGCAGAGTTTTTGTCTGT+GGG - tig0021196:73238-73257 Msa1388860:CDS 50.0%
! TTAGATGGAGGGTTTAGGGC+GGG - tig0021196:73606-73625 Msa1388860:CDS 50.0%
TCGCCTTCGATGTGAAGTGT+GGG - tig0021196:73702-73721 Msa1388860:CDS 50.0%
ATGAAGGGGCTGGAAACGAA+GGG - tig0021196:74352-74371 Msa1388860:CDS 50.0%
! ACAAAGTGCCACAAGAAGGG+TGG - tig0021196:74510-74529 Msa1388860:CDS 50.0%
! TAAGCACCGCAAGAAAGGCA+GGG - tig0021196:74704-74723 Msa1388860:CDS 50.0%
ACTTCACTAGTCCTACGCCT+GGG + tig0021196:74864-74883 None:intergenic 50.0%
ATTGATGCGGACTCTGGTAG+AGG - tig0021196:74999-75018 Msa1388860:intron 50.0%
ACTCTGGTAGAGGCAGTGTT+AGG - tig0021196:75009-75028 Msa1388860:intron 50.0%
AGCGAAGAGAAGTGAGCCAA+AGG - tig0021196:75163-75182 Msa1388860:intron 50.0%
GAAGAGAAGTGAGCCAAAGG+AGG - tig0021196:75166-75185 Msa1388860:intron 50.0%
AACGACAGAGGTAATGCTGC+AGG - tig0021196:75194-75213 Msa1388860:intron 50.0%
AAGATGGTCGTGGAGAGAGA+AGG - tig0021196:75747-75766 Msa1388860:intron 50.0%
! TGGAGAGAGAAGGCATGGAA+AGG - tig0021196:75757-75776 Msa1388860:intron 50.0%
AGGATTGAGGATGAACGTGC+AGG - tig0021196:75848-75867 Msa1388860:intron 50.0%
TTGAGGATGAACGTGCAGGA+AGG - tig0021196:75852-75871 Msa1388860:intron 50.0%
TGCAGGAAGGAAGACCTTGA+GGG - tig0021196:75865-75884 Msa1388860:intron 50.0%
GAAGGAAGACCTTGAGGGAT+GGG - tig0021196:75870-75889 Msa1388860:intron 50.0%
AAGGAAGACCTTGAGGGATG+GGG - tig0021196:75871-75890 Msa1388860:intron 50.0%
GTGGAGAGAAAAGGAGCTCT+AGG - tig0021196:76044-76063 Msa1388860:intron 50.0%
!! GAGAAAAGGAGCTCTAGGGA+TGG - tig0021196:76049-76068 Msa1388860:intron 50.0%
!! GAAAAGGAGCTCTAGGGATG+GGG - tig0021196:76051-76070 Msa1388860:intron 50.0%
AAGAGCTTAAGGGATGAGGG+TGG - tig0021196:76091-76110 Msa1388860:intron 50.0%
AAGAACTCTCGGGATGGTGA+TGG - tig0021196:76127-76146 Msa1388860:intron 50.0%
!! AGAGAAGAGCTCTAGGGATG+TGG - tig0021196:76156-76175 Msa1388860:intron 50.0%
!! GAGAAGAGCTCTAGGGATGT+GGG - tig0021196:76157-76176 Msa1388860:intron 50.0%
AGGATCGAGGATGATCGTAC+AGG - tig0021196:76205-76224 Msa1388860:intron 50.0%
CAAAACAGAAGGGATGGGGA+TGG - tig0021196:76304-76323 Msa1388860:CDS 50.0%
GAGAAAGAGCTCAAGGGATG+AGG - tig0021196:76444-76463 Msa1388860:CDS 50.0%
TCAAGGGATGAGGATGTTCG+TGG - tig0021196:76454-76473 Msa1388860:CDS 50.0%
CAAGGGATGAGGATGTTCGT+GGG - tig0021196:76455-76474 Msa1388860:CDS 50.0%
AAGGGATGAGGATGTTCGTG+GGG - tig0021196:76456-76475 Msa1388860:CDS 50.0%
! GTGGGGAAAGAAAGCACAGA+GGG - tig0021196:76473-76492 Msa1388860:CDS 50.0%
! TGGGGAAAGAAAGCACAGAG+GGG - tig0021196:76474-76493 Msa1388860:CDS 50.0%
! ATGGAGAAAGAAAGCGCGGA+AGG - tig0021196:76509-76528 Msa1388860:CDS 50.0%
! TGGAGAAAGAAAGCGCGGAA+GGG - tig0021196:76510-76529 Msa1388860:CDS 50.0%
GGGATGATGATCGTGGAGAA+AGG - tig0021196:76581-76600 Msa1388860:CDS 50.0%
! GTGGAGAAAGGAAGCACAGA+AGG - tig0021196:76593-76612 Msa1388860:exon 50.0%
! AAGGAAGCACAGAAGGGAGT+AGG - tig0021196:76600-76619 Msa1388860:exon 50.0%
ACAGAAGGGAGTAGGAAGAG+CGG - tig0021196:76608-76627 Msa1388860:intron 50.0%
GGTCCAGTAAGAGGGATAGT+CGG - tig0021196:76736-76755 Msa1388860:intron 50.0%
CCATTGGTACCAGACCCTCT+TGG + tig0021196:72544-72563 None:intergenic 55.0%
CCAAGAGGGTCTGGTACCAA+TGG - tig0021196:72541-72560 Msa1388860:CDS 55.0%
CGTGAAGCCGAGAACTTCGA+AGG - tig0021196:72588-72607 Msa1388860:CDS 55.0%
!! GAGGGAGATCAAGGTACTGC+TGG - tig0021196:72634-72653 Msa1388860:CDS 55.0%
CTCGCCTTCGATGTGAAGTG+TGG - tig0021196:73701-73720 Msa1388860:CDS 55.0%
GCACCCACACTTCACATCGA+AGG + tig0021196:73708-73727 None:intergenic 55.0%
GATGGGAATGATGAAGGGGC+TGG - tig0021196:74342-74361 Msa1388860:CDS 55.0%
GATGAAGGGGCTGGAAACGA+AGG - tig0021196:74351-74370 Msa1388860:CDS 55.0%
TGGGAGTTCCACCCTTCTTG+TGG + tig0021196:74521-74540 None:intergenic 55.0%
! CTAAGCACCGCAAGAAAGGC+AGG - tig0021196:74703-74722 Msa1388860:CDS 55.0%
CATCCACCCTGCCTTTCTTG+CGG + tig0021196:74713-74732 None:intergenic 55.0%
! ATCATCATGAAGGCGTGCCC+AGG - tig0021196:74844-74863 Msa1388860:CDS 55.0%
CACTTCACTAGTCCTACGCC+TGG + tig0021196:74865-74884 None:intergenic 55.0%
GGCTCTATTGATGCGGACTC+TGG - tig0021196:74993-75012 Msa1388860:intron 55.0%
GGCAGTGTTAGGCATGCTTC+AGG - tig0021196:75020-75039 Msa1388860:intron 55.0%
! GCAGCAGTGATAGTGATCGC+AGG - tig0021196:75111-75130 Msa1388860:intron 55.0%
AAAGGGACGAGGAAGACCGA+CGG - tig0021196:75702-75721 Msa1388860:intron 55.0%
GTGCAGGAAGGAAGACCTTG+AGG - tig0021196:75864-75883 Msa1388860:intron 55.0%
GGAAGGAAGACCTTGAGGGA+TGG - tig0021196:75869-75888 Msa1388860:intron 55.0%
TCTCTGGATGGCAATGTCCG+TGG - tig0021196:75953-75972 Msa1388860:intron 55.0%
TTAAGGGATGGCAATGGCCG+TGG - tig0021196:76025-76044 Msa1388860:intron 55.0%
GCAATGGCCGTGGAGAGAAA+AGG - tig0021196:76035-76054 Msa1388860:intron 55.0%
TTAAGGGATGAGGGTGGCAG+AGG - tig0021196:75917-75936 Msa1388860:intron 55.0%
CCCTAGAGCTCTTCTCTCCT+CGG + tig0021196:76153-76172 None:intergenic 55.0%
CCGAGGAGAGAAGAGCTCTA+GGG - tig0021196:76150-76169 Msa1388860:intron 55.0%
! CGTGGGGAAAGAAAGCACAG+AGG - tig0021196:76472-76491 Msa1388860:CDS 55.0%
CAGAAGGGAGTAGGAAGAGC+GGG - tig0021196:76609-76628 Msa1388860:intron 55.0%
CGGAGAAGCTTGAAGAGGCG+AGG - tig0021196:72776-72795 Msa1388860:CDS 60.0%
! ATGGAGGGTTTAGGGCGGGA+TGG - tig0021196:73610-73629 Msa1388860:CDS 60.0%
AAGGGACGAGGAAGACCGAC+GGG - tig0021196:75703-75722 Msa1388860:intron 60.0%
GGTCGTGGAGAGAGAAGGCA+TGG - tig0021196:75752-75771 Msa1388860:intron 60.0%
GCCGAGGAGAGAAGAGCTCT+AGG - tig0021196:76149-76168 Msa1388860:intron 60.0%
GCACCGCAAGAAAGGCAGGG+TGG - tig0021196:74707-74726 Msa1388860:CDS 65.0%
! ATGAAGGCGTGCCCAGGCGT+AGG - tig0021196:74850-74869 Msa1388860:CDS 65.0%
!! TCTCGGGATGGTGATGGCCG+AGG - tig0021196:76133-76152 Msa1388860:intron 65.0%
Chromosome Type Strat End Strand Name
tig0021196 gene 72143 76972 72143 ID=Msa1388860;Name=Msa1388860
tig0021196 mRNA 72143 76972 72143 ID=Msa1388860-mRNA-1;Parent=Msa1388860;Name=Msa1388860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|1|1|0.5|0.33|3|351|906
tig0021196 exon 72143 74879 72143 ID=Msa1388860-mRNA-1:exon:11358;Parent=Msa1388860-mRNA-1
tig0021196 exon 76267 76623 76267 ID=Msa1388860-mRNA-1:exon:11357;Parent=Msa1388860-mRNA-1
tig0021196 exon 76827 76972 76827 ID=Msa1388860-mRNA-1:exon:11356;Parent=Msa1388860-mRNA-1
tig0021196 five_prime_UTR 76827 76972 76827 ID=Msa1388860-mRNA-1:five_prime_utr;Parent=Msa1388860-mRNA-1
tig0021196 five_prime_UTR 76602 76623 76602 ID=Msa1388860-mRNA-1:five_prime_utr;Parent=Msa1388860-mRNA-1
tig0021196 CDS 76267 76601 76267 ID=Msa1388860-mRNA-1:cds;Parent=Msa1388860-mRNA-1
tig0021196 CDS 72494 74879 72494 ID=Msa1388860-mRNA-1:cds;Parent=Msa1388860-mRNA-1
tig0021196 three_prime_UTR 72143 72493 72143 ID=Msa1388860-mRNA-1:three_prime_utr;Parent=Msa1388860-mRNA-1
Gene Sequence

>Msa1388860

ATGTACAACGGAATCGGGTTACAAACCCCAAGAGGGTCTGGTACCAATGGGTACATTCAAAGCAACAAATTCTTCGTGAAGCCGAGAACTTCGAAGGTTGCTGAAAATATGAAGGGGTTTGAGGGAGATCAAGGTACTGCTGGTGTTAGTAGAAAGGCTAATAAAGAGATTCTTGAGCATGACCGAAAGCGGCAGATTCAGCTGAAGCTTGTTATTCTTGAAGATAAGCTGATTGATCAGGGTTATACTGAGGCTGAGATTGCGGAGAAGCTTGAAGAGGCGAGGAATAACTTGGAGGCTGCAGCTGATGAAAACGATGGATCCAATATGGATAAGATTTCTGATACACAGAGTCACCAAATTGCTGCTAGAAAGGAAAAACAGATGGAAACATTGAAAGCTGCTCTTGGCATAATATCTGAAGCTGATGAATTAAATACAGATGGGAATGATGAAGGGGCTGGAAACGAAGGGAAAGATGTTTCTTTTGCTGATGCAAAACATATTTTGAAACCTGAACATTCCTTTTTGGACAGAGATTTCAGTCGGAAGAAACAATTGGAGGAAGTTCAAAAAGAAGAAACTACCAAGAAAAAGAGTGTTAAAGACACAAAGTGCCACAAGAAGGGTGGAACTCCCAAGAGAAAGTACAAGGATGATTCATCTGATTCAGATAGCAGTACGGATGATGAGAAAACAGGTAGAAGGAAGAACAGTAGAGTGAGTACCGACAGTAGTGATGAATCTGATTCTGATAGTGATGCTAAGAGGAAGGTCAAGGCTAAAAAGAAGCAGAGCACATCTAAGCACCGCAAGAAAGGCAGGGTGGATGACAGTGATGATACTGATTTCTCTTCTGATAGTGAGGATAGCAAGAGTGCAAGAAAAAGTAATAAAAAACCAGTAAAGGCTAGTAAGAGGCATGATTCAGATGGAGATTCTGATCATCATGAAGGCGTGCCCAGGCGTAGGACTAGTGAAGTGAAGAGGCATGCAAAGACGAGCAAACATCATGATTCCGAAGAGGAATCTGATGCTGATAGTGAGGAAGAGAAACATGGTAGACTTGAGAAGCAGAAAACTAGGAGGTATGGCTCTATTGATGCGGACTCTGGTAGAGGCAGTGTTAGGCATGCTTCAGGACAAGACAAACATGTTAAAAGGCGGACATACTCTTCCTCTGATGAGAGTAGCAGTGATAGTGAAACTGGCAGCAGTGATAGTGATCGCAGGTATGGAAGAACTAGAAAAGTTGGGTCTGTAGCGAAGAGAAGTGAGCCAAAGGAGGAAATAAACGACAGAGGTAATGCTGCAGGAAAAGGGAAAAATAGTGCCAAGGTTGATGGATTGGATTCTTTAAGAAAATCATATGGGAGAGATTATAAAGAGGGTCCAGATTCTAGAAGTCAAACAATAGCTAAGGGTGAAAAGAAAATTGATGAAGATAGAGATAGAGATAGGGAGACTGTCAAATTTGCTAAGAATGATGGACAAGATAGGAAGTTTGGTAAAACAGAGTCTGAGTCAAAATCTCGAATTTATCAAAATGAAAATGAAGAAAGAGATGGTTATTCTAAAGCAGCTAGGATCAGAGGGAATGATAATGAAACTTCTGATCAGAGAGGCAGAAATTATAACAGGGATGTTGAATCACAATCTGTTGGACGAATTGATCGGAATAGGGAGGATTATGAAACAAGAAGGAAGGGAAGAAATGATAATGATTATAAAAGGGATCAGGATGACCATGAAGAAAAAAAACATGGAAGGAATGAAGATGATTCAAGAGATGGAAAGCATAAAAGGGACGAGGAAGACCGACGGGAGAAGAAAAGCTTAAGAGATGAAGATGGTCGTGGAGAGAGAAGGCATGGAAAGGATGAAGATTATCCTACAGGAAGAAAGCACTTGAGGGATGAAGATGATCACGGAGAAAGAAAGATCAGAAGGATTGAGGATGAACGTGCAGGAAGGAAGACCTTGAGGGATGGGGATGATTATGGAGAAAGAAAGAACTTAAGGGATGAGGGTGGCAGTAGAGAAAGAAAGAACTCTCTGGATGGCAATGTCCGTGGAGAGAAAAGAAGCTCTAAAGATGGGGATGATTATGAAGAAAGGAAGAACTTAAGGGATGGCAATGGCCGTGGAGAGAAAAGGAGCTCTAGGGATGGGGATGATTATGGAGAAAGAAAGAGCTTAAGGGATGAGGGTGGCAGAGGAGAAAGAAAGAACTCTCGGGATGGTGATGGCCGAGGAGAGAAGAGCTCTAGGGATGTGGGTGATCTTAGAGAAACAAAGACTAGAAGGATCGAGGATGATCGTACAGGAAGAAAGACCTTGAGGGATGAAGACGATTTTGGAGAAAGAAAGCACTTAAGGGATGAGGGTCGTCATAGAGAAGCACAAAACAGAAGGGATGGGGATGGCAGTGTAGAAATAAAGAACTCTAGGTATGAGGATGATCGCAAAGAAAGGAAGAACTCAAGGGAAGAGGATGACCGCAAAGAAAGAAAGAACTCAAGGGTAGATGATGATCACAGAGAGAGAAAGAGCTCAAGGGATGAGGATGTTCGTGGGGAAAGAAAGCACAGAGGGGATGATGAGTATCATGGAGAAAGAAAGCGCGGAAGGGATGATGATGATGATGATGATGGTCATGGAGAAAGAAGGCATTATAGAAGGGATGATGATCGTGGAGAAAGGAAGCACAGAAGGGAGTAG

Protein sequence

>Msa1388860

MYNGIGLQTPRGSGTNGYIQSNKFFVKPRTSKVAENMKGFEGDQGTAGVSRKANKEILEHDRKRQIQLKLVILEDKLIDQGYTEAEIAEKLEEARNNLEAAADENDGSNMDKISDTQSHQIAARKEKQMETLKAALGIISEADELNTDGNDEGAGNEGKDVSFADAKHILKPEHSFLDRDFSRKKQLEEVQKEETTKKKSVKDTKCHKKGGTPKRKYKDDSSDSDSSTDDEKTGRRKNSRVSTDSSDESDSDSDAKRKVKAKKKQSTSKHRKKGRVDDSDDTDFSSDSEDSKSARKSNKKPVKASKRHDSDGDSDHHEGVPRRRTSEVKRHAKTSKHHDSEEESDADSEEEKHGRLEKQKTRRYGSIDADSGRGSVRHASGQDKHVKRRTYSSSDESSSDSETGSSDSDRRYGRTRKVGSVAKRSEPKEEINDRGNAAGKGKNSAKVDGLDSLRKSYGRDYKEGPDSRSQTIAKGEKKIDEDRDRDRETVKFAKNDGQDRKFGKTESESKSRIYQNENEERDGYSKAARIRGNDNETSDQRGRNYNRDVESQSVGRIDRNREDYETRRKGRNDNDYKRDQDDHEEKKHGRNEDDSRDGKHKRDEEDRREKKSLRDEDGRGERRHGKDEDYPTGRKHLRDEDDHGERKIRRIEDERAGRKTLRDGDDYGERKNLRDEGGSRERKNSLDGNVRGEKRSSKDGDDYEERKNLRDGNGRGEKRSSRDGDDYGERKSLRDEGGRGERKNSRDGDGRGEKSSRDVGDLRETKTRRIEDDRTGRKTLRDEDDFGERKHLRDEGRHREAQNRRDGDGSVEIKNSRYEDDRKERKNSREEDDRKERKNSRVDDDHRERKSSRDEDVRGERKHRGDDEYHGERKRGRDDDDDDDGHGERRHYRRDDDRGERKHRRE*