Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1386050 | XP_003593554.1 | 87.034 | 563 | 24 | 8 | 1 | 517 | 1 | 560 | 0.0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1386050 | sp|Q13435|SF3B2_HUMAN | 50.092 | 541 | 221 | 15 | 26 | 529 | 367 | 895 | 3.31e-129 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1386050 | G7IPR0 | 87.034 | 563 | 24 | 8 | 1 | 517 | 1 | 560 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006040 | Msa1386050 | 0.816487 | 5.391923e-52 | -8.615850e-47 |
| Msa0007440 | Msa1386050 | 0.813847 | 2.080201e-51 | -8.615850e-47 |
| Msa0010490 | Msa1386050 | 0.828696 | 7.788806e-55 | -8.615850e-47 |
| Msa0010500 | Msa1386050 | 0.831901 | 1.283337e-55 | -8.615850e-47 |
| Msa0037540 | Msa1386050 | -0.812115 | 4.985600e-51 | -8.615850e-47 |
| Msa0037590 | Msa1386050 | -0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa0037840 | Msa1386050 | 0.800673 | 1.290605e-48 | -8.615850e-47 |
| Msa0046450 | Msa1386050 | 0.834221 | 3.396643e-56 | -8.615850e-47 |
| Msa0052860 | Msa1386050 | 0.802908 | 4.487856e-49 | -8.615850e-47 |
| Msa0054750 | Msa1386050 | 0.842793 | 2.080943e-58 | -8.615850e-47 |
| Msa0056030 | Msa1386050 | 0.863032 | 3.325601e-64 | -8.615850e-47 |
| Msa0082680 | Msa1386050 | -0.826443 | 2.705260e-54 | -8.615850e-47 |
| Msa0086420 | Msa1386050 | 0.803217 | 3.872676e-49 | -8.615850e-47 |
| Msa0090210 | Msa1386050 | 0.812762 | 3.602045e-51 | -8.615850e-47 |
| Msa0109590 | Msa1386050 | 0.802079 | 6.649644e-49 | -8.615850e-47 |
| Msa1359630 | Msa1386050 | 0.819559 | 1.089965e-52 | -8.615850e-47 |
| Msa1364210 | Msa1386050 | 0.813191 | 2.900073e-51 | -8.615850e-47 |
| Msa1371090 | Msa1386050 | 0.809879 | 1.521444e-50 | -8.615850e-47 |
| Msa1386050 | Msa1388860 | 0.870525 | 1.366061e-66 | -8.615850e-47 |
| Msa1386050 | Msa1396400 | -0.821541 | 3.821848e-53 | -8.615850e-47 |
| Msa1386050 | Msa1421060 | 0.810452 | 1.144489e-50 | -8.615850e-47 |
| Msa1386050 | Msa1436520 | 0.833402 | 5.445774e-56 | -8.615850e-47 |
| Msa1386050 | Msa1444740 | 0.819142 | 1.356480e-52 | -8.615850e-47 |
| Msa0608710 | Msa1386050 | 0.832454 | 9.364635e-56 | -8.615850e-47 |
| Msa0631350 | Msa1386050 | 0.808509 | 2.990285e-50 | -8.615850e-47 |
| Msa0634890 | Msa1386050 | 0.801256 | 9.808719e-49 | -8.615850e-47 |
| Msa0661210 | Msa1386050 | 0.820971 | 5.174158e-53 | -8.615850e-47 |
| Msa0694840 | Msa1386050 | 0.809120 | 2.213309e-50 | -8.615850e-47 |
| Msa0742750 | Msa1386050 | 0.829336 | 5.449649e-55 | -8.615850e-47 |
| Msa0748170 | Msa1386050 | 0.805632 | 1.215292e-49 | -8.615850e-47 |
| Msa0772480 | Msa1386050 | 0.806980 | 6.318919e-50 | -8.615850e-47 |
| Msa0798440 | Msa1386050 | 0.811591 | 6.485917e-51 | -8.615850e-47 |
| Msa0819060 | Msa1386050 | 0.837280 | 5.705923e-57 | -8.615850e-47 |
| Msa0830540 | Msa1386050 | 0.814959 | 1.180940e-51 | -8.615850e-47 |
| Msa0137730 | Msa1386050 | 0.833817 | 4.288224e-56 | -8.615850e-47 |
| Msa0231690 | Msa1386050 | 0.807796 | 4.243947e-50 | -8.615850e-47 |
| Msa1231840 | Msa1386050 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa1331350 | Msa1386050 | 0.810216 | 1.286918e-50 | -8.615850e-47 |
| Msa0385490 | Msa1386050 | 0.833776 | 4.392063e-56 | -8.615850e-47 |
| Msa0419520 | Msa1386050 | 0.823197 | 1.576443e-53 | -8.615850e-47 |
| Msa0465550 | Msa1386050 | 0.828834 | 7.213985e-55 | -8.615850e-47 |
| Msa0981840 | Msa1386050 | 0.975344 | 8.810518e-140 | -8.615850e-47 |
| Msa1016910 | Msa1386050 | 0.812554 | 3.999575e-51 | -8.615850e-47 |
| Msa1040800 | Msa1386050 | 0.815118 | 1.088948e-51 | -8.615850e-47 |
| Msa1055680 | Msa1386050 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa1058170 | Msa1386050 | 0.810223 | 1.282901e-50 | -8.615850e-47 |
| Msa1081790 | Msa1386050 | -0.812405 | 4.310158e-51 | -8.615850e-47 |
| Msa1089320 | Msa1386050 | 0.810660 | 1.032372e-50 | -8.615850e-47 |
| Msa0257500 | Msa1386050 | 0.807102 | 5.956303e-50 | -8.615850e-47 |
| Msa0272450 | Msa1386050 | 0.978830 | 1.184539e-146 | -8.615850e-47 |
| Msa0297810 | Msa1386050 | -0.807405 | 5.136463e-50 | -8.615850e-47 |
| Msa0307560 | Msa1386050 | 0.803639 | 3.167512e-49 | -8.615850e-47 |
| Msa0312670 | Msa1386050 | 0.803049 | 4.196866e-49 | -8.615850e-47 |
| Msa0320610 | Msa1386050 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0335820 | Msa1386050 | -0.824527 | 7.689758e-54 | -8.615850e-47 |
| Msa1133230 | Msa1386050 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
| Msa1133250 | Msa1386050 | 0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa1135800 | Msa1386050 | -0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa1140230 | Msa1386050 | 0.802468 | 5.530468e-49 | -8.615850e-47 |
| Msa1166090 | Msa1386050 | -0.819481 | 1.135601e-52 | -8.615850e-47 |
| Msa1176720 | Msa1386050 | 0.825171 | 5.419913e-54 | -8.615850e-47 |
| Msa1208380 | Msa1386050 | 0.800501 | 1.399391e-48 | -8.615850e-47 |
| Msa0489610 | Msa1386050 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa0555200 | Msa1386050 | 0.828103 | 1.082758e-54 | -8.615850e-47 |
| Msa0556790 | Msa1386050 | 0.800855 | 1.185074e-48 | -8.615850e-47 |
| Msa0966010 | Msa1386050 | 0.824618 | 7.320519e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1386050 | MtrunA17_Chr2g0282041 | 87.034 | 563 | 24 | 8 | 1 | 517 | 1 | 560 | 0.0 | 877 |
| Msa1386050 | MtrunA17_Chr4g0047751 | 86.391 | 507 | 59 | 6 | 28 | 529 | 78 | 579 | 0.0 | 801 |
| Msa1386050 | MtrunA17_Chr2g0313531 | 56.364 | 165 | 29 | 4 | 1 | 122 | 1 | 165 | 1.65e-41 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1386050 | AT4G21660.1 | 77.344 | 512 | 100 | 9 | 15 | 516 | 67 | 572 | 0.0 | 729 |
| Msa1386050 | AT4G21660.2 | 75.717 | 523 | 103 | 9 | 15 | 516 | 67 | 586 | 0.0 | 725 |
| Msa1386050 | AT4G21660.3 | 81.667 | 360 | 60 | 4 | 160 | 516 | 310 | 666 | 0.0 | 561 |
| Msa1386050 | AT4G21660.3 | 71.831 | 142 | 33 | 4 | 15 | 149 | 67 | 208 | 1.24e-49 | 181 |
| Msa1386050 | AT1G11520.1 | 66.957 | 115 | 34 | 3 | 379 | 492 | 85 | 196 | 3.71e-40 | 144 |
Find 149 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAGGTCGATTTGCTTAA+AGG | 0.211596 | tig0020780:+91312 | Msa1386050:intron |
| AGGATAAATCGGGTGCTAAA+AGG | 0.234213 | tig0020780:+91194 | Msa1386050:CDS |
| CGCCTTCACATCAAGGAAAT+TGG | 0.256686 | tig0020780:-84442 | None:intergenic |
| GACTAAACACTGGGGTGATT+TGG | 0.294704 | tig0020780:+89912 | Msa1386050:CDS |
| TGATTTGGAGGAGGAGGAGG+AGG | 0.308929 | tig0020780:+89927 | Msa1386050:CDS |
| CATAGTAGCTATAACTGTTT+CGG | 0.324690 | tig0020780:+91824 | Msa1386050:three_prime_UTR |
| GGGTGATTTGGAGGAGGAGG+AGG | 0.331062 | tig0020780:+89924 | Msa1386050:CDS |
| CACTGGCACCCAGGATAAAT+CGG | 0.339913 | tig0020780:+91183 | Msa1386050:CDS |
| CAGTATGGACGCCCACTATA+TGG | 0.344701 | tig0020780:+89326 | Msa1386050:intron |
| ATGTCAGCTTTGGCTTTGTT+TGG | 0.352303 | tig0020780:-87955 | None:intergenic |
| CGTATCAAACAAGAAGAAAA+AGG | 0.355646 | tig0020780:+85325 | Msa1386050:CDS |
| TTCTTGCAGGGGAGCGGCTG+TGG | 0.371015 | tig0020780:+85861 | Msa1386050:intron |
| TCCATGGCTTCCAACTCTTC+CGG | 0.371328 | tig0020780:-91369 | None:intergenic |
| TCTCCACAACGACTCCGTTT+TGG | 0.380697 | tig0020780:-84583 | None:intergenic |
| AAAGCTAGCTCCAGCGGGTA+TGG | 0.384929 | tig0020780:-89181 | None:intergenic |
| ATAGTAGCTATAACTGTTTC+GGG | 0.391494 | tig0020780:+91825 | Msa1386050:three_prime_UTR |
| TCCCCAAGGGATGTCAGCTT+TGG | 0.394039 | tig0020780:-87965 | None:intergenic |
| TGCAGCAGATCCTAAGTTGC+TGG | 0.399151 | tig0020780:+85626 | Msa1386050:CDS |
| TTGGTTATCATCCTGGTGGA+TGG | 0.399555 | tig0020780:+89202 | Msa1386050:CDS |
| TTAAAGCAAACCTCATAGTT+AGG | 0.402212 | tig0020780:-89377 | None:intergenic |
| AAAATTTACATACGTGTGTC+CGG | 0.405526 | tig0020780:-91052 | None:intergenic |
| ACGGAAGCAACAGAGAAATA+AGG | 0.414634 | tig0020780:+90864 | Msa1386050:CDS |
| TGGTTATCATCCTGGTGGAT+GGG | 0.416487 | tig0020780:+89203 | Msa1386050:CDS |
| GGAAGAAGAAGAGGAGGAGG+AGG | 0.417125 | tig0020780:+89957 | Msa1386050:CDS |
| ACTTGATAAAGAGGCTTCTC+AGG | 0.422146 | tig0020780:-90889 | None:intergenic |
| AGAGGAAGAAGAAGAGGAGG+AGG | 0.423172 | tig0020780:+89954 | Msa1386050:CDS |
| TTCTCCTCTCTGTAGTTATG+TGG | 0.425409 | tig0020780:+91156 | Msa1386050:intron |
| CCTGATTTCATTGCTGCCAC+TGG | 0.430702 | tig0020780:+87083 | Msa1386050:CDS |
| GGAGGAGGAAGAAGAAGGAA+TGG | 0.431152 | tig0020780:+89972 | Msa1386050:CDS |
| CCTTCAAAGTCTACCTTCTC+TGG | 0.435209 | tig0020780:-85041 | None:intergenic |
| CTGAGGGTGCTCCTCCTCCA+TGG | 0.436159 | tig0020780:+89009 | Msa1386050:CDS |
| GCTAGCTTTGGTTATCATCC+TGG | 0.441107 | tig0020780:+89195 | Msa1386050:CDS |
| CACTTTACTGCCGGAAGAGT+TGG | 0.443843 | tig0020780:+91359 | Msa1386050:CDS |
| GGATAAATCGGGTGCTAAAA+GGG | 0.449282 | tig0020780:+91195 | Msa1386050:CDS |
| AAGCCAAAGCTGACATCCCT+TGG | 0.451340 | tig0020780:+87962 | Msa1386050:CDS |
| TGTAGTTATGTGGTTGGCAC+TGG | 0.451870 | tig0020780:+91166 | Msa1386050:intron |
| ATACCCGCTGGAGCTAGCTT+TGG | 0.455254 | tig0020780:+89183 | Msa1386050:CDS |
| TATGCAGGTATGAGGAAGCT+AGG | 0.456420 | tig0020780:+91490 | Msa1386050:intron |
| AGCCAAAGCTGACATCCCTT+GGG | 0.457408 | tig0020780:+87963 | Msa1386050:CDS |
| GGTTATCATCCTGGTGGATG+GGG | 0.459842 | tig0020780:+89204 | Msa1386050:CDS |
| CAGTGTTTAGTCTTATCAAC+TGG | 0.461610 | tig0020780:-89901 | None:intergenic |
| CGAGGGTTTAAGAGAAATTG+AGG | 0.470800 | tig0020780:-84534 | None:intergenic |
| GCTGTGGCAATCACCAATCC+TGG | 0.472614 | tig0020780:+85877 | Msa1386050:CDS |
| CCAGTGGCAGCAATGAAATC+AGG | 0.472805 | tig0020780:-87083 | None:intergenic |
| TATTTCTCTGTTGCTTCCGT+AGG | 0.476260 | tig0020780:-90861 | None:intergenic |
| TATGAGTTAAACAAGTTCTC+TGG | 0.477229 | tig0020780:-91805 | None:intergenic |
| AGAAGAATTGAAACCTGCTT+CGG | 0.481151 | tig0020780:-84614 | None:intergenic |
| GAGGAGGAGGAGGAAGAAGA+AGG | 0.483462 | tig0020780:+89967 | Msa1386050:CDS |
| AGAAGAGGAAGAAGAAGAGG+AGG | 0.486639 | tig0020780:+89951 | Msa1386050:CDS |
| CCTCTCTGTAGTTATGTGGT+TGG | 0.487747 | tig0020780:+91160 | Msa1386050:intron |
| GGAAGAAGAGGAAGAAGAAG+AGG | 0.488078 | tig0020780:+89948 | Msa1386050:CDS |
| GGAAGAAGAAGGAATGGAAG+AGG | 0.491838 | tig0020780:+89978 | Msa1386050:CDS |
| ATCTTCAGCTGAGGGTAAGA+TGG | 0.493392 | tig0020780:-89141 | None:intergenic |
| CCAGAGAAGGTAGACTTTGA+AGG | 0.493845 | tig0020780:+85041 | Msa1386050:CDS |
| GTATGGGAGCATTCAGTCCT+GGG | 0.498463 | tig0020780:-89164 | None:intergenic |
| TCCATGGCTTATTAATATGC+AGG | 0.501939 | tig0020780:+89025 | Msa1386050:CDS |
| TTCCAAACACCTACCAGTCC+AGG | 0.501998 | tig0020780:-85895 | None:intergenic |
| AAAAGAAATTCATACTTGGC+AGG | 0.504336 | tig0020780:-91402 | None:intergenic |
| AAGCTAGCTCCAGCGGGTAT+GGG | 0.504829 | tig0020780:-89180 | None:intergenic |
| ATTCCTACCTCAACAACATC+AGG | 0.507591 | tig0020780:-85499 | None:intergenic |
| ATGAAATCAGGAAGTTGAAA+GGG | 0.508748 | tig0020780:-87071 | None:intergenic |
| TCTGGATTTATGCAGGTATG+AGG | 0.509168 | tig0020780:+91482 | Msa1386050:intron |
| ACAAGATCAGCCTAACTATG+AGG | 0.510458 | tig0020780:+89367 | Msa1386050:CDS |
| AGGTCAAAAGTCAGATAAAG+TGG | 0.510633 | tig0020780:+91332 | Msa1386050:CDS |
| GAAGGTAGACTTTGAAGGCA+TGG | 0.512645 | tig0020780:+85046 | Msa1386050:CDS |
| GGTATGGGAGCATTCAGTCC+TGG | 0.514292 | tig0020780:-89165 | None:intergenic |
| AGAAAGTATACTTCGTCGAC+AGG | 0.517760 | tig0020780:-89234 | None:intergenic |
| AAGTCGTGTGATAACATACC+AGG | 0.517875 | tig0020780:-88966 | None:intergenic |
| AGAAGAAGGAATGGAAGAGG+AGG | 0.521562 | tig0020780:+89981 | Msa1386050:CDS |
| CTCCAATTTCCTTGATGTGA+AGG | 0.522310 | tig0020780:+84440 | None:intergenic |
| TAAACCCTCGACGATGGCTG+CGG | 0.522545 | tig0020780:+84547 | Msa1386050:exon |
| TTTAGCACCCGATTTATCCT+GGG | 0.522600 | tig0020780:-91191 | None:intergenic |
| GCCGGAAGAGTTGGAAGCCA+TGG | 0.523168 | tig0020780:+91368 | Msa1386050:CDS |
| TACCCTCAGCTGAAGATCCC+AGG | 0.525500 | tig0020780:+89147 | Msa1386050:CDS |
| TAAACACTGGGGTGATTTGG+AGG | 0.529324 | tig0020780:+89915 | Msa1386050:CDS |
| CATGGAGGAGGAGCACCCTC+AGG | 0.530319 | tig0020780:-89008 | None:intergenic |
| GAAGTTGAAACAAAAGCAAA+GGG | 0.533046 | tig0020780:+87736 | Msa1386050:CDS |
| GGAGAATACTGATCCGAAGC+AGG | 0.533910 | tig0020780:+84601 | Msa1386050:CDS |
| CTCAAGACCTGATGTTGTTG+AGG | 0.536900 | tig0020780:+85492 | Msa1386050:CDS |
| TTCCGTAGGTCAATAACATC+AGG | 0.537897 | tig0020780:-90847 | None:intergenic |
| AACACCTACCAGTCCAGGAT+TGG | 0.539428 | tig0020780:-85890 | None:intergenic |
| ATACTAGGACACTGATAAGA+AGG | 0.539496 | tig0020780:+85214 | Msa1386050:intron |
| ACTGGCACCCAGGATAAATC+GGG | 0.540487 | tig0020780:+91184 | Msa1386050:CDS |
| AATGAAATCAGGAAGTTGAA+AGG | 0.540666 | tig0020780:-87072 | None:intergenic |
| GCAGGCTTATATTGAGAAAG+AGG | 0.540854 | tig0020780:+87706 | Msa1386050:intron |
| TTTCCTTGATGTGAAGGCGG+TGG | 0.547457 | tig0020780:+84446 | Msa1386050:five_prime_UTR |
| AGAAGTTGAAACAAAAGCAA+AGG | 0.550383 | tig0020780:+87735 | Msa1386050:CDS |
| CACGACTTGAAAGAAGCTCT+TGG | 0.551012 | tig0020780:+88981 | Msa1386050:CDS |
| TCACGAAGGAAAAGAATTTG+AGG | 0.551560 | tig0020780:+87994 | Msa1386050:CDS |
| GAAGAGGAGGAATTTGAAGA+TGG | 0.554526 | tig0020780:+89994 | Msa1386050:CDS |
| AATCCACCGCCTTCACATCA+AGG | 0.556238 | tig0020780:-84449 | None:intergenic |
| TAGCTATAACTGTTTCGGGC+AGG | 0.559786 | tig0020780:+91829 | Msa1386050:three_prime_UTR |
| GGACGGCAAGTCGAAGAAGA+AGG | 0.560843 | tig0020780:+91702 | Msa1386050:CDS |
| CTGAATGCTCCCATACCCGC+TGG | 0.561728 | tig0020780:+89171 | Msa1386050:CDS |
| CTGGGGTGATTTGGAGGAGG+AGG | 0.562341 | tig0020780:+89921 | Msa1386050:CDS |
| GGAGGCTTGCCCCATCCACC+AGG | 0.563012 | tig0020780:-89213 | None:intergenic |
| AGTGGACGTCACTTTACTGC+CGG | 0.566733 | tig0020780:+91350 | Msa1386050:CDS |
| CACCTGATGTTATTGACCTA+CGG | 0.568343 | tig0020780:+90845 | Msa1386050:CDS |
| GGCAATCACCAATCCTGGAC+TGG | 0.570853 | tig0020780:+85882 | Msa1386050:CDS |
| GTAACACTTCCTTACCAAAA+CGG | 0.572606 | tig0020780:+84569 | Msa1386050:CDS |
| TGGTGTGCAGGTAAAGTTGA+GGG | 0.572723 | tig0020780:+88935 | Msa1386050:intron |
| TGTGACCAATGCCTAGGTAC+AGG | 0.575538 | tig0020780:-85678 | None:intergenic |
| AGCTGAGGGTAAGATGGTGG+AGG | 0.578031 | tig0020780:-89135 | None:intergenic |
| CTTCGTGATACAACTCCCCA+AGG | 0.578300 | tig0020780:-87979 | None:intergenic |
| GCGAGAAGATTTCAGTGACA+TGG | 0.578430 | tig0020780:+91536 | Msa1386050:CDS |
| CAGGTATGAGGAAGCTAGGG+AGG | 0.579280 | tig0020780:+91494 | Msa1386050:intron |
| TTACCAAAACGGAGTCGTTG+TGG | 0.584851 | tig0020780:+84580 | Msa1386050:CDS |
| ATGTGGTTCTTGCAGGGGAG+CGG | 0.585315 | tig0020780:+85855 | Msa1386050:intron |
| AAATTTACATACGTGTGTCC+GGG | 0.587575 | tig0020780:-91051 | None:intergenic |
| TTCTCTTAAACCCTCGACGA+TGG | 0.588795 | tig0020780:+84541 | Msa1386050:exon |
| ACCTGCATATTAATAAGCCA+TGG | 0.590007 | tig0020780:-89026 | None:intergenic |
| AGTCTGTTGATAGTCTATCA+AGG | 0.590579 | tig0020780:+90022 | Msa1386050:CDS |
| TGGTATTGAGAAAATCAGAC+AGG | 0.592292 | tig0020780:+87103 | Msa1386050:CDS |
| ATTTAGTTTCACTGCTTCAG+AGG | 0.596518 | tig0020780:+85097 | Msa1386050:CDS |
| AGCTTTGGTTATCATCCTGG+TGG | 0.598182 | tig0020780:+89198 | Msa1386050:CDS |
| TAACCAAAGCTAGCTCCAGC+GGG | 0.600182 | tig0020780:-89186 | None:intergenic |
| ATGCAGGTATGAGGAAGCTA+GGG | 0.600493 | tig0020780:+91491 | Msa1386050:intron |
| CACTGATAAGAAGGATGAGG+CGG | 0.600748 | tig0020780:+85223 | Msa1386050:CDS |
| GTCCTGGGATCTTCAGCTGA+GGG | 0.601211 | tig0020780:-89149 | None:intergenic |
| GTTACCGCAGCCATCGTCGA+GGG | 0.603962 | tig0020780:-84551 | None:intergenic |
| GCAGGATCTTTACTTGTACC+CGG | 0.604637 | tig0020780:+91033 | Msa1386050:CDS |
| GCTCAGCACTCCTACTGGAG+TGG | 0.606638 | tig0020780:+90819 | Msa1386050:intron |
| TTTCAGTGACATGGTTGCAG+AGG | 0.609120 | tig0020780:+91545 | Msa1386050:CDS |
| AAGTTGAGGGAGATGAAACC+TGG | 0.609533 | tig0020780:+88948 | Msa1386050:CDS |
| AGTTGATAAGACTAAACACT+GGG | 0.609767 | tig0020780:+89903 | Msa1386050:CDS |
| AATTGAGTATGTACCAGAGA+AGG | 0.613096 | tig0020780:+85028 | Msa1386050:CDS |
| ATATTAATAAGCCATGGAGG+AGG | 0.613756 | tig0020780:-89020 | None:intergenic |
| CTGTACCTGTACCTAGGCAT+TGG | 0.613828 | tig0020780:+85673 | Msa1386050:CDS |
| AGAAAGATGCAAGAAAAGGA+CGG | 0.618296 | tig0020780:+91685 | Msa1386050:CDS |
| TTCAGCTGAGGGTAAGATGG+TGG | 0.618413 | tig0020780:-89138 | None:intergenic |
| TGTGGTTGGCACTGGCACCC+AGG | 0.621505 | tig0020780:+91174 | Msa1386050:CDS |
| TCAGGTGTCTCCACTCCAGT+AGG | 0.629943 | tig0020780:-90829 | None:intergenic |
| GAAGCTCTTGGTATGCCTGA+GGG | 0.630070 | tig0020780:+88993 | Msa1386050:CDS |
| CAATTTCCTTGATGTGAAGG+CGG | 0.630272 | tig0020780:+84443 | None:intergenic |
| GGACACTGATAAGAAGGATG+AGG | 0.631112 | tig0020780:+85220 | Msa1386050:intron |
| ATAACCAAAGCTAGCTCCAG+CGG | 0.635047 | tig0020780:-89187 | None:intergenic |
| ACACTGGGGTGATTTGGAGG+AGG | 0.642355 | tig0020780:+89918 | Msa1386050:CDS |
| AGTCCTGGGATCTTCAGCTG+AGG | 0.642746 | tig0020780:-89150 | None:intergenic |
| CAGTTGATAAGACTAAACAC+TGG | 0.643279 | tig0020780:+89902 | Msa1386050:CDS |
| AAGTATACTTCGTCGACAGG+AGG | 0.657544 | tig0020780:-89231 | None:intergenic |
| GGAACACTGTACCTGTACCT+AGG | 0.658691 | tig0020780:+85667 | Msa1386050:CDS |
| AGAAGCTCTTGGTATGCCTG+AGG | 0.662536 | tig0020780:+88992 | Msa1386050:CDS |
| TTCGTGATACAACTCCCCAA+GGG | 0.663464 | tig0020780:-87978 | None:intergenic |
| TTGGTGTGCAGGTAAAGTTG+AGG | 0.667122 | tig0020780:+88934 | Msa1386050:intron |
| GCCAAAGCTGACATCCCTTG+GGG | 0.669292 | tig0020780:+87964 | Msa1386050:CDS |
| TGTTACCGCAGCCATCGTCG+AGG | 0.690229 | tig0020780:-84552 | None:intergenic |
| CTTGGGGAGTTGTATCACGA+AGG | 0.695093 | tig0020780:+87980 | Msa1386050:CDS |
| TGCATATTAATAAGCCATGG+AGG | 0.699081 | tig0020780:-89023 | None:intergenic |
| GTTGATAAGACTAAACACTG+GGG | 0.838951 | tig0020780:+89904 | Msa1386050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | tig0020780:91739-91758 | Msa1386050:three_prime_UTR | 0.0% |
| !! | TTTAAAAAAAAAAAACAATG+TGG | + | tig0020780:90426-90445 | Msa1386050:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGGT+TGG | + | tig0020780:91747-91766 | Msa1386050:three_prime_UTR | 10.0% |
| !!! | TTGATTTGAATTAAATTGAT+AGG | + | tig0020780:84702-84721 | Msa1386050:intron | 15.0% |
| !!! | TTGTTTTGAATTTTGATTAA+AGG | + | tig0020780:85179-85198 | Msa1386050:intron | 15.0% |
| !!! | TATTTCATAATTTCATTTTC+AGG | + | tig0020780:85590-85609 | Msa1386050:intron | 15.0% |
| !! | CATTATAACAAAGATAATAA+AGG | - | tig0020780:85944-85963 | None:intergenic | 15.0% |
| !!! | ATTATCTTTGTTATAATGAT+TGG | + | tig0020780:85946-85965 | Msa1386050:intron | 15.0% |
| !!! | TTATCTTTGTTATAATGATT+GGG | + | tig0020780:85947-85966 | Msa1386050:intron | 15.0% |
| !! | TAATATATTACAGTTCAATA+CGG | - | tig0020780:86083-86102 | None:intergenic | 15.0% |
| !! | TATAAATTTCAGTTTCATTT+AGG | + | tig0020780:86279-86298 | Msa1386050:intron | 15.0% |
| !! | ATAAATTTCAGTTTCATTTA+GGG | + | tig0020780:86280-86299 | Msa1386050:intron | 15.0% |
| !!! | TTGTTTTCAAGATTATAAAT+TGG | - | tig0020780:86364-86383 | None:intergenic | 15.0% |
| !! | ATAAATAATTGAAGATAAAG+AGG | - | tig0020780:86935-86954 | None:intergenic | 15.0% |
| !! | AATCTCAAGATTATTTAAAT+AGG | + | tig0020780:87354-87373 | Msa1386050:intron | 15.0% |
| !!! | TAAAGAATTTATGTAGATTT+TGG | + | tig0020780:87398-87417 | Msa1386050:intron | 15.0% |
| !!! | AAAGAATTTATGTAGATTTT+GGG | + | tig0020780:87399-87418 | Msa1386050:intron | 15.0% |
| !! | TAAATGAACTTTATATGAAA+TGG | + | tig0020780:87588-87607 | Msa1386050:intron | 15.0% |
| !! | AATAAAATTGTAAAACACAA+AGG | - | tig0020780:87824-87843 | None:intergenic | 15.0% |
| !! | TAAAATAGTTATAGAACATA+TGG | - | tig0020780:87871-87890 | None:intergenic | 15.0% |
| !! | AAATATAACTATTAGAAAGT+AGG | - | tig0020780:87897-87916 | None:intergenic | 15.0% |
| !! | TTTCTAATAGTTATATTTCT+TGG | + | tig0020780:87899-87918 | Msa1386050:intron | 15.0% |
| !!! | TCGTTTTCTTTTAATTATTT+AGG | + | tig0020780:88225-88244 | Msa1386050:intron | 15.0% |
| !! | TATACTACTGAAATTATTAT+TGG | + | tig0020780:88343-88362 | Msa1386050:intron | 15.0% |
| !! | ATACTACTGAAATTATTATT+GGG | + | tig0020780:88344-88363 | Msa1386050:intron | 15.0% |
| !! | AATATTTCATACATTTACAT+TGG | - | tig0020780:88532-88551 | None:intergenic | 15.0% |
| !! | TTACTTATATATTATTGGAA+CGG | + | tig0020780:88887-88906 | Msa1386050:intron | 15.0% |
| !!! | ATAAATTCACTGTTTATTTT+TGG | + | tig0020780:89259-89278 | Msa1386050:intron | 15.0% |
| !!! | ATAATTGATTTTCTTTATGT+TGG | - | tig0020780:90214-90233 | None:intergenic | 15.0% |
| !!! | TTTTCAATGATATTTGTTTT+AGG | + | tig0020780:91253-91272 | Msa1386050:intron | 15.0% |
| !!! | TTTCATGTTTTTTTCTTTTT+TGG | + | tig0020780:91286-91305 | Msa1386050:intron | 15.0% |
| !! | TTGAGGAAAAAATTGAAATA+TGG | - | tig0020780:84520-84539 | None:intergenic | 20.0% |
| !! | ATCAATATTGTAGTGAAATT+AGG | + | tig0020780:84770-84789 | Msa1386050:intron | 20.0% |
| !! | TCAATATTGTAGTGAAATTA+GGG | + | tig0020780:84771-84790 | Msa1386050:intron | 20.0% |
| !! | TTGTATATCTAAGTAGATAA+TGG | + | tig0020780:84921-84940 | Msa1386050:intron | 20.0% |
| !!! | TAGATAATGGTTTTCATAAT+TGG | + | tig0020780:84934-84953 | Msa1386050:intron | 20.0% |
| !!! | AAGCATACTTGTTAATATTT+AGG | + | tig0020780:84989-85008 | Msa1386050:intron | 20.0% |
| !!! | AAGATTAAACTTTTTCAGAA+TGG | - | tig0020780:85423-85442 | None:intergenic | 20.0% |
| !! | ATGAAATATCATTTGCATAA+TGG | - | tig0020780:85578-85597 | None:intergenic | 20.0% |
| !!! | ATAATTTCATTTTCAGGTTT+GGG | + | tig0020780:85596-85615 | Msa1386050:intron | 20.0% |
| !! | ATCTTATATATGTATGTATG+TGG | + | tig0020780:85838-85857 | Msa1386050:intron | 20.0% |
| !!! | ACTTGTATTGTTTTATATGA+TGG | + | tig0020780:85984-86003 | Msa1386050:intron | 20.0% |
| !!! | CTTGTATTGTTTTATATGAT+GGG | + | tig0020780:85985-86004 | Msa1386050:intron | 20.0% |
| !!! | TTGTATTGTTTTATATGATG+GGG | + | tig0020780:85986-86005 | Msa1386050:intron | 20.0% |
| !! | TTTATAATCTTGAAAACAAG+TGG | + | tig0020780:86365-86384 | Msa1386050:intron | 20.0% |
| !! | CAAAAAAGCCATATAATTAT+AGG | - | tig0020780:86813-86832 | None:intergenic | 20.0% |
| !!! | CTTTTTTGCATGATATTAAT+GGG | + | tig0020780:86825-86844 | Msa1386050:intron | 20.0% |
| !! | TCAGCATCAATTATATAATT+GGG | - | tig0020780:86974-86993 | None:intergenic | 20.0% |
| !! | TTAAATAATCTTGAGATTCT+TGG | - | tig0020780:87352-87371 | None:intergenic | 20.0% |
| !! | AAAAATGGATATAGATTATC+AGG | + | tig0020780:87781-87800 | Msa1386050:CDS | 20.0% |
| !! | TGTTAAATAAAATCAACAAG+TGG | + | tig0020780:88318-88337 | Msa1386050:intron | 20.0% |
| !!! | TTTCCAGTATTTTGTTTATT+AGG | + | tig0020780:88452-88471 | Msa1386050:intron | 20.0% |
| !!! | ACAAGTTTTCACTTTTAATT+TGG | + | tig0020780:88854-88873 | Msa1386050:intron | 20.0% |
| !! | GTTATACTATTTAATTAGAG+TGG | + | tig0020780:89406-89425 | Msa1386050:intron | 20.0% |
| !! | ACAATGAAGTTAGAAAAAAT+GGG | - | tig0020780:89465-89484 | None:intergenic | 20.0% |
| !! | AACAATGAAGTTAGAAAAAA+TGG | - | tig0020780:89466-89485 | None:intergenic | 20.0% |
| !!! | ATTTTTTCTAACTTCATTGT+TGG | + | tig0020780:89465-89484 | Msa1386050:intron | 20.0% |
| !!! | TTTTTTCTAACTTCATTGTT+GGG | + | tig0020780:89466-89485 | Msa1386050:intron | 20.0% |
| !! | CAAAAAGAAAACTACATATA+TGG | - | tig0020780:89552-89571 | None:intergenic | 20.0% |
| !!! | AGGAATATATTTTGAAGTTT+TGG | - | tig0020780:89657-89676 | None:intergenic | 20.0% |
| !!! | TTTTTCATTCAACCAATAAA+AGG | - | tig0020780:89757-89776 | None:intergenic | 20.0% |
| !!! | TTTTAAAGTTGACATTGTAT+GGG | - | tig0020780:89816-89835 | None:intergenic | 20.0% |
| !!! | ATTTTAAAGTTGACATTGTA+TGG | - | tig0020780:89817-89836 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTCATAATTTGC+TGG | + | tig0020780:89856-89875 | Msa1386050:intron | 20.0% |
| !! | ATGTTAACAAGATAATGAAA+TGG | - | tig0020780:90061-90080 | None:intergenic | 20.0% |
| !!! | CTAGTTTTTTTCTTTTGAAA+GGG | + | tig0020780:90160-90179 | Msa1386050:intron | 20.0% |
| !! | ATGTTGAGTTATTTATTAGT+AGG | + | tig0020780:90328-90347 | Msa1386050:intron | 20.0% |
| !! | TGTTGAGTTATTTATTAGTA+GGG | + | tig0020780:90329-90348 | Msa1386050:intron | 20.0% |
| !! | TCATTTAGTAAATTTATCAG+AGG | + | tig0020780:90352-90371 | Msa1386050:intron | 20.0% |
| !!! | TTTGGTTCATTTTTTTTAGA+GGG | - | tig0020780:90712-90731 | None:intergenic | 20.0% |
| !!! | TAGATAACGGAAAAATAAAA+AGG | - | tig0020780:90978-90997 | None:intergenic | 20.0% |
| !! | TATCAAGAAACAAACAATTA+TGG | - | tig0020780:91119-91138 | None:intergenic | 20.0% |
| !!! | AAGATGTTTTCTCTTTTAAT+AGG | + | tig0020780:91219-91238 | Msa1386050:intron | 20.0% |
| !!! | AGATGTTTTCTCTTTTAATA+GGG | + | tig0020780:91220-91239 | Msa1386050:intron | 20.0% |
| ! | ACGAAAATCAAATGAATCAA+AGG | - | tig0020780:84662-84681 | None:intergenic | 25.0% |
| !! | GATTTTCGTTGTTTATAGAT+TGG | + | tig0020780:84673-84692 | Msa1386050:intron | 25.0% |
| !!! | TGATTGATTATAGAGTGTTT+TGG | + | tig0020780:84895-84914 | Msa1386050:intron | 25.0% |
| !! | ATTGCACAATTAGTTTGAAA+TGG | + | tig0020780:85529-85548 | Msa1386050:intron | 25.0% |
| !! | ACAATTAGTTTGAAATGGTT+GGG | + | tig0020780:85534-85553 | Msa1386050:intron | 25.0% |
| !!! | CATAATTTCATTTTCAGGTT+TGG | + | tig0020780:85595-85614 | Msa1386050:intron | 25.0% |
| !!! | TGGTGTTTTTGAAATCTTAT+CGG | + | tig0020780:85646-85665 | Msa1386050:CDS | 25.0% |
| !! | ACAGAAAAGAAAATTTTTGC+AGG | + | tig0020780:85698-85717 | Msa1386050:intron | 25.0% |
| ! | CCTATAATAACTATCAAGTT+AGG | - | tig0020780:85735-85754 | None:intergenic | 25.0% |
| !! | CCTAACTTGATAGTTATTAT+AGG | + | tig0020780:85732-85751 | Msa1386050:intron | 25.0% |
| ! | TGTTATAATGATTGGGAATA+TGG | + | tig0020780:85954-85973 | Msa1386050:intron | 25.0% |
| !!! | AAATATCCTCGTTTATTTTC+AGG | - | tig0020780:86641-86660 | None:intergenic | 25.0% |
| !!! | GCTTTTTTGCATGATATTAA+TGG | + | tig0020780:86824-86843 | Msa1386050:intron | 25.0% |
| ! | GTCAGCATCAATTATATAAT+TGG | - | tig0020780:86975-86994 | None:intergenic | 25.0% |
| !!! | GAATGTTCACTTATTTTGAT+GGG | - | tig0020780:87199-87218 | None:intergenic | 25.0% |
| !!! | AGAATGTTCACTTATTTTGA+TGG | - | tig0020780:87200-87219 | None:intergenic | 25.0% |
| ! | TACAGAAAAAATGCAATTTC+AGG | - | tig0020780:87259-87278 | None:intergenic | 25.0% |
| ! | AGATTATTTAAATAGGTAGC+TGG | + | tig0020780:87361-87380 | Msa1386050:intron | 25.0% |
| ! | GATTATTTAAATAGGTAGCT+GGG | + | tig0020780:87362-87381 | Msa1386050:intron | 25.0% |
| !!! | AATTTATGTAGATTTTGGGA+TGG | + | tig0020780:87403-87422 | Msa1386050:intron | 25.0% |
| ! | CAGTAGAGATATGTTATATT+GGG | + | tig0020780:87518-87537 | Msa1386050:intron | 25.0% |
| ! | AGTAGAGATATGTTATATTG+GGG | + | tig0020780:87519-87538 | Msa1386050:intron | 25.0% |
| !!! | ATATCCATTTTTCCCATTTT+TGG | - | tig0020780:87773-87792 | None:intergenic | 25.0% |
| ! | ACTTAAAAAATGCATCATGA+AGG | - | tig0020780:87934-87953 | None:intergenic | 25.0% |
| !!! | TCTTCAATACTTTTTAGCAA+GGG | - | tig0020780:88025-88044 | None:intergenic | 25.0% |
| !!! | TTCTTCAATACTTTTTAGCA+AGG | - | tig0020780:88026-88045 | None:intergenic | 25.0% |
| ! | ATATAGTGTAACTTATGCTT+TGG | + | tig0020780:88053-88072 | Msa1386050:intron | 25.0% |
| !!! | ATTTATTTCTTGCGACATTT+TGG | + | tig0020780:88084-88103 | Msa1386050:intron | 25.0% |
| ! | TGACCTAATAAACAAAATAC+TGG | - | tig0020780:88458-88477 | None:intergenic | 25.0% |
| !! | TGAAATATTTCTCTTTTGAG+AGG | + | tig0020780:88543-88562 | Msa1386050:intron | 25.0% |
| !!! | ATTAGTTTGTATGATGACAT+TGG | + | tig0020780:88911-88930 | Msa1386050:intron | 25.0% |
| ! | AAGCTGGTTAATAAGATAAA+GGG | - | tig0020780:89289-89308 | None:intergenic | 25.0% |
| ! | TAAGCTGGTTAATAAGATAA+AGG | - | tig0020780:89290-89309 | None:intergenic | 25.0% |
| ! | ACAATGTTTACATTAAACAC+AGG | - | tig0020780:89583-89602 | None:intergenic | 25.0% |
| !!! | CTATTTCTTGATTACTCTTT+TGG | + | tig0020780:89682-89701 | Msa1386050:intron | 25.0% |
| !! | TTTAAAGTTGACATTGTATG+GGG | - | tig0020780:89815-89834 | None:intergenic | 25.0% |
| ! | ATCTTGTTAACATGTAATGT+AGG | + | tig0020780:90068-90087 | Msa1386050:intron | 25.0% |
| !!! | ATTTTACCAAAAGAAAGTGT+GGG | + | tig0020780:90109-90128 | Msa1386050:intron | 25.0% |
| ! | GAAAAAAACTAGCAAAATCA+AGG | - | tig0020780:90152-90171 | None:intergenic | 25.0% |
| !!! | GCTAGTTTTTTTCTTTTGAA+AGG | + | tig0020780:90159-90178 | Msa1386050:intron | 25.0% |
| ! | AAAGGGATTACTATTCTTAA+TGG | + | tig0020780:90177-90196 | Msa1386050:intron | 25.0% |
| !! | TTGATTTTCTTTATGTTGGT+GGG | - | tig0020780:90210-90229 | None:intergenic | 25.0% |
| !!! | ATTGATTTTCTTTATGTTGG+TGG | - | tig0020780:90211-90230 | None:intergenic | 25.0% |
| ! | GTCTTTCAATTAAGCTTATT+TGG | + | tig0020780:90243-90262 | Msa1386050:intron | 25.0% |
| !!! | AGATTTTAAAATACCGTGTT+TGG | + | tig0020780:90524-90543 | Msa1386050:intron | 25.0% |
| ! | TATGACCTCAAATATTACAA+GGG | - | tig0020780:90601-90620 | None:intergenic | 25.0% |
| ! | ATATGACCTCAAATATTACA+AGG | - | tig0020780:90602-90621 | None:intergenic | 25.0% |
| ! | TGAGGTCATATTAATTATAC+AGG | + | tig0020780:90611-90630 | Msa1386050:intron | 25.0% |
| !!! | TTCATTTTTTTTAGAGGGAA+GGG | - | tig0020780:90707-90726 | None:intergenic | 25.0% |
| !!! | GTTTGGTTCATTTTTTTTAG+AGG | - | tig0020780:90713-90732 | None:intergenic | 25.0% |
| ! | ATTGACAGTAAATAACTGTA+CGG | - | tig0020780:90761-90780 | None:intergenic | 25.0% |
| !! | TATTTTTCCGTTATCTATGA+AGG | + | tig0020780:90981-91000 | Msa1386050:intron | 25.0% |
| ! | GAAGAGAAAGAAGAAAAAAT+TGG | + | tig0020780:91009-91028 | Msa1386050:CDS | 25.0% |
| !!! | TCAATGATATTTGTTTTAGG+AGG | + | tig0020780:91256-91275 | Msa1386050:intron | 25.0% |
| ! | GATGAAAAGAAATTCATACT+TGG | - | tig0020780:91409-91428 | None:intergenic | 25.0% |
| ! | GTTTCTATTTCAGATTTAGT+GGG | + | tig0020780:91429-91448 | Msa1386050:intron | 25.0% |
| ! | AAGTTAGATACAGATCATAA+TGG | - | tig0020780:91628-91647 | None:intergenic | 25.0% |
| ! | TTATGATCTGTATCTAACTT+TGG | + | tig0020780:91628-91647 | Msa1386050:intron | 25.0% |
| !! | TTTTTCTTTTCTTCTCATTC+TGG | - | tig0020780:91666-91685 | None:intergenic | 25.0% |
| ! | AAAAAGAAAGATGCAAGAAA+AGG | + | tig0020780:91681-91700 | Msa1386050:CDS | 25.0% |
| TTTCGTTGTTTATAGATTGG+AGG | + | tig0020780:84676-84695 | Msa1386050:intron | 30.0% | |
| !! | AGGTTTGCTATTGTAATACT+AGG | + | tig0020780:85199-85218 | Msa1386050:intron | 30.0% |
| GATAACGAGCAAAAAGAAAA+AGG | + | tig0020780:85302-85321 | Msa1386050:CDS | 30.0% | |
| CGTATCAAACAAGAAGAAAA+AGG | + | tig0020780:85325-85344 | Msa1386050:CDS | 30.0% | |
| !! | AATTTGTTGTTGTATTCCTG+TGG | + | tig0020780:85393-85412 | Msa1386050:intron | 30.0% |
| ! | CACAATTAGTTTGAAATGGT+TGG | + | tig0020780:85533-85552 | Msa1386050:intron | 30.0% |
| TGAAAACGATGAAGTCAATA+AGG | + | tig0020780:85812-85831 | Msa1386050:intron | 30.0% | |
| AATAAAGGAGAAACAACTCA+AGG | - | tig0020780:85929-85948 | None:intergenic | 30.0% | |
| !! | TGTTTTATATGATGGGGAAT+AGG | + | tig0020780:85992-86011 | Msa1386050:intron | 30.0% |
| !! | TATGAATTGGTGTTATGGTT+TGG | - | tig0020780:86056-86075 | None:intergenic | 30.0% |
| !! | GATCTTATGAATTGGTGTTA+TGG | - | tig0020780:86061-86080 | None:intergenic | 30.0% |
| TCAATACGGATCTTATGAAT+TGG | - | tig0020780:86069-86088 | None:intergenic | 30.0% | |
| TTACAAACGAACTAGACTAA+TGG | + | tig0020780:86104-86123 | Msa1386050:intron | 30.0% | |
| AAAATTGTATAGCAACGGTT+CGG | - | tig0020780:86144-86163 | None:intergenic | 30.0% | |
| CAAAAAAACAGTTCAACTTG+GGG | - | tig0020780:86167-86186 | None:intergenic | 30.0% | |
| GCAAAAAAACAGTTCAACTT+GGG | - | tig0020780:86168-86187 | None:intergenic | 30.0% | |
| ! | TGTGCATATACAAAAGCTTT+TGG | + | tig0020780:86229-86248 | Msa1386050:intron | 30.0% |
| ! | GAATCCTAAATCCATTTTCA+CGG | - | tig0020780:86545-86564 | None:intergenic | 30.0% |
| AAACGAGGATATTTGTAGTT+CGG | + | tig0020780:86647-86666 | Msa1386050:intron | 30.0% | |
| GTAAATTGTGTGTGAAATAG+TGG | + | tig0020780:86700-86719 | Msa1386050:intron | 30.0% | |
| ! | GTAAACTACCAGAATTTGTT+CGG | + | tig0020780:86731-86750 | Msa1386050:intron | 30.0% |
| GAAATTAACCGAACAAATTC+TGG | - | tig0020780:86742-86761 | None:intergenic | 30.0% | |
| CGGTTAATTTCAGTATAGTT+CGG | + | tig0020780:86751-86770 | Msa1386050:intron | 30.0% | |
| ATAATTATAGGTCCCCAATT+AGG | - | tig0020780:86801-86820 | None:intergenic | 30.0% | |
| ATTGGGGACCTATAATTATA+TGG | + | tig0020780:86802-86821 | Msa1386050:intron | 30.0% | |
| ATGAAATCAGGAAGTTGAAA+GGG | - | tig0020780:87074-87093 | None:intergenic | 30.0% | |
| AATGAAATCAGGAAGTTGAA+AGG | - | tig0020780:87075-87094 | None:intergenic | 30.0% | |
| ACACACATATATATGCAAAC+AGG | - | tig0020780:87137-87156 | None:intergenic | 30.0% | |
| GCAGTAGAGATATGTTATAT+TGG | + | tig0020780:87517-87536 | Msa1386050:intron | 30.0% | |
| TGAAACAGAAATTCAACAGA+GGG | - | tig0020780:87568-87587 | None:intergenic | 30.0% | |
| ATGAAACAGAAATTCAACAG+AGG | - | tig0020780:87569-87588 | None:intergenic | 30.0% | |
| TAGATGAATGTATGTAGCAT+AGG | - | tig0020780:87621-87640 | None:intergenic | 30.0% | |
| AGAAGTTGAAACAAAAGCAA+AGG | + | tig0020780:87735-87754 | Msa1386050:CDS | 30.0% | |
| GAAGTTGAAACAAAAGCAAA+GGG | + | tig0020780:87736-87755 | Msa1386050:CDS | 30.0% | |
| AGTTATATTTCTTGGTTGCT+AGG | + | tig0020780:87907-87926 | Msa1386050:intron | 30.0% | |
| !!! | TTTGGTTTTGTTGTAGTGTT+AGG | + | tig0020780:88102-88121 | Msa1386050:intron | 30.0% |
| CTGTGAAGTAAAAGTTACTA+TGG | - | tig0020780:88143-88162 | None:intergenic | 30.0% | |
| ! | CATAGTAACTTTTACTTCAC+AGG | + | tig0020780:88141-88160 | Msa1386050:intron | 30.0% |
| GAAACAAACTAATGCAAAAG+AGG | - | tig0020780:88392-88411 | None:intergenic | 30.0% | |
| !! | ATATTTCTCTTTTGAGAGGT+TGG | + | tig0020780:88547-88566 | Msa1386050:intron | 30.0% |
| TTAGATCTTTCGTCAAAAGA+GGG | - | tig0020780:88758-88777 | None:intergenic | 30.0% | |
| !! | CTTATTCTAGCTTTAACTAG+AGG | + | tig0020780:88789-88808 | Msa1386050:intron | 30.0% |
| ! | ATTTTTCGTTGATCCTGTAT+TGG | + | tig0020780:89067-89086 | Msa1386050:intron | 30.0% |
| TAGAACACGTTTAATGTACA+AGG | - | tig0020780:89093-89112 | None:intergenic | 30.0% | |
| !!! | TATTTTTTTCCCCAGAGATA+TGG | + | tig0020780:89111-89130 | Msa1386050:intron | 30.0% |
| AGCTGGTTAATAAGATAAAG+GGG | - | tig0020780:89288-89307 | None:intergenic | 30.0% | |
| GTATCTTCATCTAAACAGTA+TGG | + | tig0020780:89311-89330 | Msa1386050:intron | 30.0% | |
| CAAAAACATCTCCATATAGT+GGG | - | tig0020780:89340-89359 | None:intergenic | 30.0% | |
| TTAAAGCAAACCTCATAGTT+AGG | - | tig0020780:89380-89399 | None:intergenic | 30.0% | |
| ATGAAGTTAGAAAAAATGGG+TGG | - | tig0020780:89462-89481 | None:intergenic | 30.0% | |
| !!! | TTTGAAGTTTTGGATAAGCA+AGG | - | tig0020780:89647-89666 | None:intergenic | 30.0% |
| !! | AGTTGATAAGACTAAACACT+GGG | + | tig0020780:89903-89922 | Msa1386050:CDS | 30.0% |
| ! | CATTTTACCAAAAGAAAGTG+TGG | + | tig0020780:90108-90127 | Msa1386050:intron | 30.0% |
| ! | AGTAAATTTATCAGAGGTAC+TGG | + | tig0020780:90358-90377 | Msa1386050:intron | 30.0% |
| !! | GTAAATTTATCAGAGGTACT+GGG | + | tig0020780:90359-90378 | Msa1386050:intron | 30.0% |
| AAAAAACAATGTGGATATGC+AGG | + | tig0020780:90435-90454 | Msa1386050:intron | 30.0% | |
| TTTCACCCTTGTAATATTTG+AGG | + | tig0020780:90593-90612 | Msa1386050:intron | 30.0% | |
| !!! | TCATTTTTTTTAGAGGGAAG+GGG | - | tig0020780:90706-90725 | None:intergenic | 30.0% |
| !!! | GTTCATTTTTTTTAGAGGGA+AGG | - | tig0020780:90708-90727 | None:intergenic | 30.0% |
| TACTCTAAATCTTAGTGGTT+TGG | - | tig0020780:90730-90749 | None:intergenic | 30.0% | |
| TGGATTACTCTAAATCTTAG+TGG | - | tig0020780:90735-90754 | None:intergenic | 30.0% | |
| TTGACAGTAAATAACTGTAC+GGG | - | tig0020780:90760-90779 | None:intergenic | 30.0% | |
| GAAAAACTCACTTGATAAAG+AGG | - | tig0020780:90901-90920 | None:intergenic | 30.0% | |
| GCTGTTAAAAAATGTTCAGT+AGG | - | tig0020780:90923-90942 | None:intergenic | 30.0% | |
| AAAGAAGAAAAAATTGGTGC+AGG | + | tig0020780:91015-91034 | Msa1386050:CDS | 30.0% | |
| AAAATTTACATACGTGTGTC+CGG | - | tig0020780:91055-91074 | None:intergenic | 30.0% | |
| ! | TTTCTCTTTTAATAGGGTAG+AGG | + | tig0020780:91226-91245 | Msa1386050:intron | 30.0% |
| ! | TTCTCTTTTAATAGGGTAGA+GGG | + | tig0020780:91227-91246 | Msa1386050:intron | 30.0% |
| !!! | TTTTCTTTTTTGGAACTTCC+AGG | + | tig0020780:91296-91315 | Msa1386050:intron | 30.0% |
| AAAAGAAATTCATACTTGGC+AGG | - | tig0020780:91405-91424 | None:intergenic | 30.0% | |
| CGTTTCTATTTCAGATTTAG+TGG | + | tig0020780:91428-91447 | Msa1386050:intron | 30.0% | |
| AAGAAATGATTTCTTACCTC+TGG | + | tig0020780:91464-91483 | Msa1386050:intron | 30.0% | |
| AACTAACCCTACTAATCATA+TGG | + | tig0020780:91574-91593 | Msa1386050:intron | 30.0% | |
| ACTAACCCTACTAATCATAT+GGG | + | tig0020780:91575-91594 | Msa1386050:intron | 30.0% | |
| ! | ATCTAACTTTGGTCTTTATC+TGG | + | tig0020780:91639-91658 | Msa1386050:intron | 30.0% |
| TATGAGTTAAACAAGTTCTC+TGG | - | tig0020780:91808-91827 | None:intergenic | 30.0% | |
| CATAGTAGCTATAACTGTTT+CGG | + | tig0020780:91824-91843 | Msa1386050:three_prime_UTR | 30.0% | |
| ATAGTAGCTATAACTGTTTC+GGG | + | tig0020780:91825-91844 | Msa1386050:three_prime_UTR | 30.0% | |
| GTAACACTTCCTTACCAAAA+CGG | + | tig0020780:84569-84588 | Msa1386050:CDS | 35.0% | |
| AGAAGAATTGAAACCTGCTT+CGG | - | tig0020780:84617-84636 | None:intergenic | 35.0% | |
| AATTGAGTATGTACCAGAGA+AGG | + | tig0020780:85028-85047 | Msa1386050:CDS | 35.0% | |
| ! | ATTTAGTTTCACTGCTTCAG+AGG | + | tig0020780:85097-85116 | Msa1386050:CDS | 35.0% |
| ! | TTTTGTCGTTGCAACTTCTT+TGG | + | tig0020780:85152-85171 | Msa1386050:intron | 35.0% |
| ATACTAGGACACTGATAAGA+AGG | + | tig0020780:85214-85233 | Msa1386050:intron | 35.0% | |
| TTCAAAAACACCAGCAACTT+AGG | - | tig0020780:85639-85658 | None:intergenic | 35.0% | |
| AATGATGTAAGCATGTCTGA+TGG | + | tig0020780:85757-85776 | Msa1386050:intron | 35.0% | |
| ATTACTACATCACTCATGCA+GGG | - | tig0020780:85788-85807 | None:intergenic | 35.0% | |
| TATTACTACATCACTCATGC+AGG | - | tig0020780:85789-85808 | None:intergenic | 35.0% | |
| TGCATGAGTGATGTAGTAAT+AGG | + | tig0020780:85788-85807 | Msa1386050:intron | 35.0% | |
| GCATGAGTGATGTAGTAATA+GGG | + | tig0020780:85789-85808 | Msa1386050:intron | 35.0% | |
| TGGGGAAAATTGTATAGCAA+CGG | - | tig0020780:86149-86168 | None:intergenic | 35.0% | |
| CGCAAAAAAACAGTTCAACT+TGG | - | tig0020780:86169-86188 | None:intergenic | 35.0% | |
| ! | TATACAAAAGCTTTTGGCGA+TGG | + | tig0020780:86235-86254 | Msa1386050:intron | 35.0% |
| ATGGATGAAACAGTGGTTAT+GGG | + | tig0020780:86254-86273 | Msa1386050:intron | 35.0% | |
| AGGGATTAATTCCCAAATTG+TGG | + | tig0020780:86299-86318 | Msa1386050:intron | 35.0% | |
| GGGATTAATTCCCAAATTGT+GGG | + | tig0020780:86300-86319 | Msa1386050:intron | 35.0% | |
| AATTCCCAAATTGTGGGAAA+AGG | + | tig0020780:86306-86325 | Msa1386050:intron | 35.0% | |
| ATTCCCAAATTGTGGGAAAA+GGG | + | tig0020780:86307-86326 | Msa1386050:intron | 35.0% | |
| ! | ATTCCCTTTTCCCACAATTT+GGG | - | tig0020780:86313-86332 | None:intergenic | 35.0% |
| ! | TAAATCCATTTTCACGGTCA+CGG | - | tig0020780:86539-86558 | None:intergenic | 35.0% |
| CATTGATAGAGAGAGGATTT+AGG | + | tig0020780:86567-86586 | Msa1386050:intron | 35.0% | |
| ! | AGAGGATTTAGGTTTACAAG+CGG | + | tig0020780:86578-86597 | Msa1386050:intron | 35.0% |
| !!! | TCCTCGTTTATTTTCAGGTT+CGG | - | tig0020780:86636-86655 | None:intergenic | 35.0% |
| TTGTGTGTGAAATAGTGGTT+TGG | + | tig0020780:86705-86724 | Msa1386050:intron | 35.0% | |
| !!! | TCGGTTCAACTTTTTTGTTG+TGG | + | tig0020780:86770-86789 | Msa1386050:intron | 35.0% |
| !!! | CGGTTCAACTTTTTTGTTGT+GGG | + | tig0020780:86771-86790 | Msa1386050:intron | 35.0% |
| TGGGTATTTATTCACGACAA+AGG | + | tig0020780:86844-86863 | Msa1386050:intron | 35.0% | |
| !! | CAGAAGCTGTGTTATTGTTT+TGG | + | tig0020780:87021-87040 | Msa1386050:intron | 35.0% |
| ! | TCTGATTTTCTCAATACCAG+TGG | - | tig0020780:87102-87121 | None:intergenic | 35.0% |
| ! | TGGTATTGAGAAAATCAGAC+AGG | + | tig0020780:87103-87122 | Msa1386050:CDS | 35.0% |
| !!! | TGTTCACTTATTTTGATGGG+AGG | - | tig0020780:87196-87215 | None:intergenic | 35.0% |
| !!! | TATGTAGATTTTGGGATGGA+TGG | + | tig0020780:87407-87426 | Msa1386050:intron | 35.0% |
| !!! | ATGTAGATTTTGGGATGGAT+GGG | + | tig0020780:87408-87427 | Msa1386050:intron | 35.0% |
| ACTTATAGCAAGTTAGAGTG+TGG | + | tig0020780:87456-87475 | Msa1386050:intron | 35.0% | |
| CTTATAGCAAGTTAGAGTGT+GGG | + | tig0020780:87457-87476 | Msa1386050:intron | 35.0% | |
| TGTTATATTGGGGATGTTGA+TGG | + | tig0020780:87529-87548 | Msa1386050:intron | 35.0% | |
| AAACAGCAACTACAACAATC+TGG | - | tig0020780:87663-87682 | None:intergenic | 35.0% | |
| GAACGTATGCAACCAAAAAT+GGG | + | tig0020780:87758-87777 | Msa1386050:CDS | 35.0% | |
| GCAACCAAAAATGGGAAAAA+TGG | + | tig0020780:87766-87785 | Msa1386050:CDS | 35.0% | |
| TCACGAAGGAAAAGAATTTG+AGG | + | tig0020780:87994-88013 | Msa1386050:CDS | 35.0% | |
| ! | TAACTTTTACTTCACAGGAG+TGG | + | tig0020780:88146-88165 | Msa1386050:intron | 35.0% |
| GATCTCTAATGTTGAGCAAT+AGG | + | tig0020780:88168-88187 | Msa1386050:intron | 35.0% | |
| AATGTTGAGCAATAGGTGTT+TGG | + | tig0020780:88175-88194 | Msa1386050:intron | 35.0% | |
| TTCCACTCAAATCAATCGTT+GGG | - | tig0020780:88201-88220 | None:intergenic | 35.0% | |
| ! | CAATCTATGTTTTTCCCATC+AGG | - | tig0020780:88421-88440 | None:intergenic | 35.0% |
| AGAAAGACACAAAATGGAGA+AGG | - | tig0020780:88606-88625 | None:intergenic | 35.0% | |
| TTCGAGAGAAAGACACAAAA+TGG | - | tig0020780:88612-88631 | None:intergenic | 35.0% | |
| TAGATCTTTCGTCAAAAGAG+GGG | - | tig0020780:88757-88776 | None:intergenic | 35.0% | |
| CTTAGATCTTTCGTCAAAAG+AGG | - | tig0020780:88759-88778 | None:intergenic | 35.0% | |
| GTTTGTATGATGACATTGGT+TGG | + | tig0020780:88915-88934 | Msa1386050:intron | 35.0% | |
| ATATTAATAAGCCATGGAGG+AGG | - | tig0020780:89023-89042 | None:intergenic | 35.0% | |
| TGCATATTAATAAGCCATGG+AGG | - | tig0020780:89026-89045 | None:intergenic | 35.0% | |
| TCCATGGCTTATTAATATGC+AGG | + | tig0020780:89025-89044 | Msa1386050:CDS | 35.0% | |
| ACCTGCATATTAATAAGCCA+TGG | - | tig0020780:89029-89048 | None:intergenic | 35.0% | |
| GGCTTATTAATATGCAGGTA+AGG | + | tig0020780:89030-89049 | Msa1386050:intron | 35.0% | |
| TTAATGTACAAGGCCAATAC+AGG | - | tig0020780:89083-89102 | None:intergenic | 35.0% | |
| GCTGGTTAATAAGATAAAGG+GGG | - | tig0020780:89287-89306 | None:intergenic | 35.0% | |
| TTAGATGAAGATACGTAAGC+TGG | - | tig0020780:89305-89324 | None:intergenic | 35.0% | |
| CCAAAAACATCTCCATATAG+TGG | - | tig0020780:89341-89360 | None:intergenic | 35.0% | |
| ! | CCACTATATGGAGATGTTTT+TGG | + | tig0020780:89338-89357 | Msa1386050:CDS | 35.0% |
| GTAATCAAGAAATAGCACTG+AGG | - | tig0020780:89677-89696 | None:intergenic | 35.0% | |
| ! | TCTTGATTACTCTTTTGGTG+TGG | + | tig0020780:89687-89706 | Msa1386050:intron | 35.0% |
| ATAAAAGGACTGCCTCTTAT+GGG | - | tig0020780:89742-89761 | None:intergenic | 35.0% | |
| AATAAAAGGACTGCCTCTTA+TGG | - | tig0020780:89743-89762 | None:intergenic | 35.0% | |
| ! | ATAAGAGGCAGTCCTTTTAT+TGG | + | tig0020780:89742-89761 | Msa1386050:intron | 35.0% |
| !! | CAGTGTTTAGTCTTATCAAC+TGG | - | tig0020780:89904-89923 | None:intergenic | 35.0% |
| !! | CAGTTGATAAGACTAAACAC+TGG | + | tig0020780:89902-89921 | Msa1386050:CDS | 35.0% |
| ! | GTTGATAAGACTAAACACTG+GGG | + | tig0020780:89904-89923 | Msa1386050:CDS | 35.0% |
| !! | AGTCTGTTGATAGTCTATCA+AGG | + | tig0020780:90022-90041 | Msa1386050:CDS | 35.0% |
| ! | TGTAATGTAGGTTTGAAGTG+TGG | + | tig0020780:90080-90099 | Msa1386050:intron | 35.0% |
| AAACTAGCAAAATCAAGGTG+AGG | - | tig0020780:90147-90166 | None:intergenic | 35.0% | |
| AGATAGATGTGGTGCTTATT+AGG | + | tig0020780:90384-90403 | Msa1386050:intron | 35.0% | |
| TGCTTATTAGGTTAGGTACT+TGG | + | tig0020780:90396-90415 | Msa1386050:intron | 35.0% | |
| TTAGGGTCTGTTAGGTTTAA+TGG | + | tig0020780:90464-90483 | Msa1386050:intron | 35.0% | |
| ! | TGTTAGGTTTAATGGATGAG+AGG | + | tig0020780:90472-90491 | Msa1386050:intron | 35.0% |
| ! | GTTAGGTTTAATGGATGAGA+GGG | + | tig0020780:90473-90492 | Msa1386050:intron | 35.0% |
| TGACAGTAAATAACTGTACG+GGG | - | tig0020780:90759-90778 | None:intergenic | 35.0% | |
| CAAAATGACACAGGAAAAAG+AGG | - | tig0020780:90800-90819 | None:intergenic | 35.0% | |
| TCAAGCACCTTCATAGATAA+CGG | - | tig0020780:90991-91010 | None:intergenic | 35.0% | |
| AAATTTACATACGTGTGTCC+GGG | - | tig0020780:91054-91073 | None:intergenic | 35.0% | |
| ATAACTACAGAGAGGAGAAA+AGG | - | tig0020780:91155-91174 | None:intergenic | 35.0% | |
| AGGTCAAAAGTCAGATAAAG+TGG | + | tig0020780:91332-91351 | Msa1386050:CDS | 35.0% | |
| AGAAAGATGCAAGAAAAGGA+CGG | + | tig0020780:91685-91704 | Msa1386050:CDS | 35.0% | |
| CGAGGGTTTAAGAGAAATTG+AGG | - | tig0020780:84537-84556 | None:intergenic | 40.0% | |
| AGGTTATGCGATAGTAACAG+AGG | - | tig0020780:84642-84661 | None:intergenic | 40.0% | |
| ! | TTTTCAGAATGGATCTCCAC+AGG | - | tig0020780:85412-85431 | None:intergenic | 40.0% |
| ATTCCTACCTCAACAACATC+AGG | - | tig0020780:85502-85521 | None:intergenic | 40.0% | |
| ! | CATAATGGCCTTGAAAGAAG+GGG | - | tig0020780:85563-85582 | None:intergenic | 40.0% |
| ! | GCATAATGGCCTTGAAAGAA+GGG | - | tig0020780:85564-85583 | None:intergenic | 40.0% |
| ! | TGCATAATGGCCTTGAAAGA+AGG | - | tig0020780:85565-85584 | None:intergenic | 40.0% |
| TGTATGTATGTGGTTCTTGC+AGG | + | tig0020780:85848-85867 | Msa1386050:intron | 40.0% | |
| GTATGTATGTGGTTCTTGCA+GGG | + | tig0020780:85849-85868 | Msa1386050:intron | 40.0% | |
| TATGTATGTGGTTCTTGCAG+GGG | + | tig0020780:85850-85869 | Msa1386050:intron | 40.0% | |
| ACTGGTAGGTGTTTGGAAAT+GGG | + | tig0020780:85900-85919 | Msa1386050:intron | 40.0% | |
| GATGGATGAAACAGTGGTTA+TGG | + | tig0020780:86253-86272 | Msa1386050:intron | 40.0% | |
| ! | CATTCCCTTTTCCCACAATT+TGG | - | tig0020780:86314-86333 | None:intergenic | 40.0% |
| ATTGTGGGAAAAGGGAATGT+TGG | + | tig0020780:86315-86334 | Msa1386050:intron | 40.0% | |
| GCGACTATGTTTAACTCACT+AGG | - | tig0020780:86396-86415 | None:intergenic | 40.0% | |
| !!! | CCACGTAGTTTTAGAAGTCA+GGG | - | tig0020780:86423-86442 | None:intergenic | 40.0% |
| !!! | ACCACGTAGTTTTAGAAGTC+AGG | - | tig0020780:86424-86443 | None:intergenic | 40.0% |
| TTGTTTGAACAAACCTCGTG+AGG | + | tig0020780:86444-86463 | Msa1386050:intron | 40.0% | |
| TGTTTGAACAAACCTCGTGA+GGG | + | tig0020780:86445-86464 | Msa1386050:intron | 40.0% | |
| ! | GTGACCGTGAAAATGGATTT+AGG | + | tig0020780:86538-86557 | Msa1386050:intron | 40.0% |
| GATTCGTCATTGATAGAGAG+AGG | + | tig0020780:86560-86579 | Msa1386050:intron | 40.0% | |
| TTAGGTTTACAAGCGGATCT+TGG | + | tig0020780:86585-86604 | Msa1386050:intron | 40.0% | |
| ACCGAACCTGAAAATAAACG+AGG | + | tig0020780:86632-86651 | Msa1386050:intron | 40.0% | |
| !!! | TCAACTTTTTTGTTGTGGGC+AGG | + | tig0020780:86775-86794 | Msa1386050:intron | 40.0% |
| GAGCATTAAGCACAATGGAA+AGG | - | tig0020780:86901-86920 | None:intergenic | 40.0% | |
| TTCCATTGTGCTTAATGCTC+AGG | + | tig0020780:86901-86920 | Msa1386050:intron | 40.0% | |
| !!! | AGCTGTGTTATTGTTTTGGC+AGG | + | tig0020780:87025-87044 | Msa1386050:intron | 40.0% |
| !!! | GCTGTGTTATTGTTTTGGCA+GGG | + | tig0020780:87026-87045 | Msa1386050:intron | 40.0% |
| !!! | CTGTGTTATTGTTTTGGCAG+GGG | + | tig0020780:87027-87046 | Msa1386050:intron | 40.0% |
| GCAGTAGAATAAGCATCTGA+TGG | - | tig0020780:87282-87301 | None:intergenic | 40.0% | |
| TAAATAGGTAGCTGGGAAGT+TGG | + | tig0020780:87369-87388 | Msa1386050:intron | 40.0% | |
| AAATTCAACAGAGGGACACA+AGG | - | tig0020780:87560-87579 | None:intergenic | 40.0% | |
| GCAGGCTTATATTGAGAAAG+AGG | + | tig0020780:87706-87725 | Msa1386050:intron | 40.0% | |
| GGAACGTATGCAACCAAAAA+TGG | + | tig0020780:87757-87776 | Msa1386050:CDS | 40.0% | |
| !! | ATGTCAGCTTTGGCTTTGTT+TGG | - | tig0020780:87958-87977 | None:intergenic | 40.0% |
| ! | GTAGTGTTAGGCTAGTTCTT+AGG | + | tig0020780:88114-88133 | Msa1386050:intron | 40.0% |
| GTTCCACTCAAATCAATCGT+TGG | - | tig0020780:88202-88221 | None:intergenic | 40.0% | |
| ! | TCTATGTTTTTCCCATCAGG+TGG | - | tig0020780:88418-88437 | None:intergenic | 40.0% |
| AGACACAAAATGGAGAAGGA+GGG | - | tig0020780:88707-88726 | None:intergenic | 40.0% | |
| AAGACACAAAATGGAGAAGG+AGG | - | tig0020780:88603-88622 | None:intergenic | 40.0% | |
| CAAGAGAGAGAGACACAAAA+TGG | + | tig0020780:88697-88716 | Msa1386050:intron | 40.0% | |
| AGAGAGACACAAAATGGAGA+AGG | + | tig0020780:88703-88722 | Msa1386050:intron | 40.0% | |
| GAGAAGGAGAGAATGAGATA+AGG | + | tig0020780:88719-88738 | Msa1386050:intron | 40.0% | |
| CTAACGCTCAACTAGATCAA+TGG | - | tig0020780:88818-88837 | None:intergenic | 40.0% | |
| TGAAAACTTGTGAATGTGCC+TGG | - | tig0020780:88845-88864 | None:intergenic | 40.0% | |
| AAGTCGTGTGATAACATACC+AGG | - | tig0020780:88969-88988 | None:intergenic | 40.0% | |
| ! | AGAAAGTATACTTCGTCGAC+AGG | - | tig0020780:89237-89256 | None:intergenic | 40.0% |
| ACAAGATCAGCCTAACTATG+AGG | + | tig0020780:89367-89386 | Msa1386050:CDS | 40.0% | |
| !! | TGATTACTCTTTTGGTGTGG+CGG | + | tig0020780:89690-89709 | Msa1386050:intron | 40.0% |
| CTCTTATGGGTGAAAAGAGA+AGG | - | tig0020780:89729-89748 | None:intergenic | 40.0% | |
| ! | CTTCTCTTTTCACCCATAAG+AGG | + | tig0020780:89727-89746 | Msa1386050:intron | 40.0% |
| GAAGAGGAGGAATTTGAAGA+TGG | + | tig0020780:89994-90013 | Msa1386050:CDS | 40.0% | |
| ! | ATGTAGGTTTGAAGTGTGGT+TGG | + | tig0020780:90084-90103 | Msa1386050:intron | 40.0% |
| ! | AGAACACCCACACTTTCTTT+TGG | - | tig0020780:90118-90137 | None:intergenic | 40.0% |
| GATGTGGTGCTTATTAGGTT+AGG | + | tig0020780:90389-90408 | Msa1386050:intron | 40.0% | |
| AAACCTAACAGACCCTAAGT+GGG | - | tig0020780:90462-90481 | None:intergenic | 40.0% | |
| TAAACCTAACAGACCCTAAG+TGG | - | tig0020780:90463-90482 | None:intergenic | 40.0% | |
| ! | GTTTAATGGATGAGAGGGAA+GGG | + | tig0020780:90478-90497 | Msa1386050:intron | 40.0% |
| ! | TGAGAGGGAAGGGATTTTAA+TGG | + | tig0020780:90488-90507 | Msa1386050:intron | 40.0% |
| !! | AGGGAAGGGATTTTAATGGA+AGG | + | tig0020780:90492-90511 | Msa1386050:intron | 40.0% |
| !! | GGGAAGGGATTTTAATGGAA+GGG | + | tig0020780:90493-90512 | Msa1386050:intron | 40.0% |
| !! | AAGGGATTTTAATGGAAGGG+AGG | + | tig0020780:90496-90515 | Msa1386050:intron | 40.0% |
| !! | AGGGATTTTAATGGAAGGGA+GGG | + | tig0020780:90497-90516 | Msa1386050:intron | 40.0% |
| ! | ATACCGTGTTTGGTTCAACA+TGG | + | tig0020780:90534-90553 | Msa1386050:intron | 40.0% |
| ! | TACCGTGTTTGGTTCAACAT+GGG | + | tig0020780:90535-90554 | Msa1386050:intron | 40.0% |
| AAAAAAGTGGGGGACTTAGA+GGG | - | tig0020780:90670-90689 | None:intergenic | 40.0% | |
| !!! | TTTTTTTAGAGGGAAGGGGA+GGG | - | tig0020780:90702-90721 | None:intergenic | 40.0% |
| !!! | TTTTTTTTAGAGGGAAGGGG+AGG | - | tig0020780:90703-90722 | None:intergenic | 40.0% |
| AGTAAATAACTGTACGGGGA+TGG | - | tig0020780:90755-90774 | None:intergenic | 40.0% | |
| TGACACAGGAAAAAGAGGTA+AGG | - | tig0020780:90795-90814 | None:intergenic | 40.0% | |
| CACCTGATGTTATTGACCTA+CGG | + | tig0020780:90845-90864 | Msa1386050:CDS | 40.0% | |
| TTCCGTAGGTCAATAACATC+AGG | - | tig0020780:90850-90869 | None:intergenic | 40.0% | |
| ! | TATTTCTCTGTTGCTTCCGT+AGG | - | tig0020780:90864-90883 | None:intergenic | 40.0% |
| ACGGAAGCAACAGAGAAATA+AGG | + | tig0020780:90864-90883 | Msa1386050:CDS | 40.0% | |
| ACTTGATAAAGAGGCTTCTC+AGG | - | tig0020780:90892-90911 | None:intergenic | 40.0% | |
| TTCTCCTCTCTGTAGTTATG+TGG | + | tig0020780:91156-91175 | Msa1386050:intron | 40.0% | |
| TTTAGCACCCGATTTATCCT+GGG | - | tig0020780:91194-91213 | None:intergenic | 40.0% | |
| ! | TTTTAGCACCCGATTTATCC+TGG | - | tig0020780:91195-91214 | None:intergenic | 40.0% |
| AGGATAAATCGGGTGCTAAA+AGG | + | tig0020780:91194-91213 | Msa1386050:CDS | 40.0% | |
| GGATAAATCGGGTGCTAAAA+GGG | + | tig0020780:91195-91214 | Msa1386050:CDS | 40.0% | |
| !! | TTCCAGGTCGATTTGCTTAA+AGG | + | tig0020780:91312-91331 | Msa1386050:intron | 40.0% |
| TCTTACCTCTGGATTTATGC+AGG | + | tig0020780:91475-91494 | Msa1386050:intron | 40.0% | |
| TCATACCTGCATAAATCCAG+AGG | - | tig0020780:91483-91502 | None:intergenic | 40.0% | |
| TCTGGATTTATGCAGGTATG+AGG | + | tig0020780:91482-91501 | Msa1386050:intron | 40.0% | |
| GCAGTCCCATATGATTAGTA+GGG | - | tig0020780:91583-91602 | None:intergenic | 40.0% | |
| TGCAGTCCCATATGATTAGT+AGG | - | tig0020780:91584-91603 | None:intergenic | 40.0% | |
| TTCTCTTAAACCCTCGACGA+TGG | + | tig0020780:84541-84560 | Msa1386050:exon | 45.0% | |
| !! | ACAACGACTCCGTTTTGGTA+AGG | - | tig0020780:84581-84600 | None:intergenic | 45.0% |
| TTACCAAAACGGAGTCGTTG+TGG | + | tig0020780:84580-84599 | Msa1386050:CDS | 45.0% | |
| CCTTCAAAGTCTACCTTCTC+TGG | - | tig0020780:85044-85063 | None:intergenic | 45.0% | |
| CCAGAGAAGGTAGACTTTGA+AGG | + | tig0020780:85041-85060 | Msa1386050:CDS | 45.0% | |
| ! | GAAGGTAGACTTTGAAGGCA+TGG | + | tig0020780:85046-85065 | Msa1386050:CDS | 45.0% |
| GGACACTGATAAGAAGGATG+AGG | + | tig0020780:85220-85239 | Msa1386050:intron | 45.0% | |
| CACTGATAAGAAGGATGAGG+CGG | + | tig0020780:85223-85242 | Msa1386050:CDS | 45.0% | |
| CTCAAGACCTGATGTTGTTG+AGG | + | tig0020780:85492-85511 | Msa1386050:CDS | 45.0% | |
| AGACCTGATGTTGTTGAGGT+AGG | + | tig0020780:85496-85515 | Msa1386050:intron | 45.0% | |
| TTGGGTATCCCCTTCTTTCA+AGG | + | tig0020780:85552-85571 | Msa1386050:intron | 45.0% | |
| ! | CTTTTCTGTGACCAATGCCT+AGG | - | tig0020780:85687-85706 | None:intergenic | 45.0% |
| GACTGGTAGGTGTTTGGAAA+TGG | + | tig0020780:85899-85918 | Msa1386050:intron | 45.0% | |
| TTTGGCGATGGATGAAACAG+TGG | + | tig0020780:86247-86266 | Msa1386050:intron | 45.0% | |
| !! | CCCTGACTTCTAAAACTACG+TGG | + | tig0020780:86420-86439 | Msa1386050:intron | 45.0% |
| AGCCTGAGCATTAAGCACAA+TGG | - | tig0020780:86906-86925 | None:intergenic | 45.0% | |
| !! | ATCTGAAGTGTTGTGCATGC+AGG | + | tig0020780:87688-87707 | Msa1386050:intron | 45.0% |
| TTCGTGATACAACTCCCCAA+GGG | - | tig0020780:87981-88000 | None:intergenic | 45.0% | |
| TTTGTTTCCCACCACCTGAT+GGG | + | tig0020780:88404-88423 | Msa1386050:intron | 45.0% | |
| ! | TGTTTTTCCCATCAGGTGGT+GGG | - | tig0020780:88414-88433 | None:intergenic | 45.0% |
| ! | ATGTTTTTCCCATCAGGTGG+TGG | - | tig0020780:88415-88434 | None:intergenic | 45.0% |
| GAGAAGAAGAGAATGGGAGA+AGG | - | tig0020780:88580-88599 | None:intergenic | 45.0% | |
| AGGAGGGAGAAGAAGAGAAT+GGG | - | tig0020780:88586-88605 | None:intergenic | 45.0% | |
| AAGGAGGGAGAAGAAGAGAA+TGG | - | tig0020780:88587-88606 | None:intergenic | 45.0% | |
| GGAGAGAATGAGATAAGGAG+AGG | + | tig0020780:88724-88743 | Msa1386050:intron | 45.0% | |
| TAGTTGAGCGTTAGTGATCC+AGG | + | tig0020780:88824-88843 | Msa1386050:intron | 45.0% | |
| TTGGTGTGCAGGTAAAGTTG+AGG | + | tig0020780:88934-88953 | Msa1386050:intron | 45.0% | |
| TGGTGTGCAGGTAAAGTTGA+GGG | + | tig0020780:88935-88954 | Msa1386050:intron | 45.0% | |
| AAGTTGAGGGAGATGAAACC+TGG | + | tig0020780:88948-88967 | Msa1386050:CDS | 45.0% | |
| CACGACTTGAAAGAAGCTCT+TGG | + | tig0020780:88981-89000 | Msa1386050:CDS | 45.0% | |
| ATCTTCAGCTGAGGGTAAGA+TGG | - | tig0020780:89144-89163 | None:intergenic | 45.0% | |
| ATAACCAAAGCTAGCTCCAG+CGG | - | tig0020780:89190-89209 | None:intergenic | 45.0% | |
| !! | GCTAGCTTTGGTTATCATCC+TGG | + | tig0020780:89195-89214 | Msa1386050:CDS | 45.0% |
| ! | AGCTTTGGTTATCATCCTGG+TGG | + | tig0020780:89198-89217 | Msa1386050:CDS | 45.0% |
| TTGGTTATCATCCTGGTGGA+TGG | + | tig0020780:89202-89221 | Msa1386050:CDS | 45.0% | |
| ! | TGGTTATCATCCTGGTGGAT+GGG | + | tig0020780:89203-89222 | Msa1386050:CDS | 45.0% |
| AAGTATACTTCGTCGACAGG+AGG | - | tig0020780:89234-89253 | None:intergenic | 45.0% | |
| GACTAAACACTGGGGTGATT+TGG | + | tig0020780:89912-89931 | Msa1386050:CDS | 45.0% | |
| ! | TAAACACTGGGGTGATTTGG+AGG | + | tig0020780:89915-89934 | Msa1386050:CDS | 45.0% |
| GGAAGAAGAGGAAGAAGAAG+AGG | + | tig0020780:89948-89967 | Msa1386050:CDS | 45.0% | |
| AGAAGAGGAAGAAGAAGAGG+AGG | + | tig0020780:89951-89970 | Msa1386050:CDS | 45.0% | |
| GGAAGAAGAAGGAATGGAAG+AGG | + | tig0020780:89978-89997 | Msa1386050:CDS | 45.0% | |
| AGAAGAAGGAATGGAAGAGG+AGG | + | tig0020780:89981-90000 | Msa1386050:CDS | 45.0% | |
| ! | GGTACTGGGTTAGATAGATG+TGG | + | tig0020780:90373-90392 | Msa1386050:intron | 45.0% |
| ! | GGTTTAATGGATGAGAGGGA+AGG | + | tig0020780:90477-90496 | Msa1386050:intron | 45.0% |
| !! | GGGATTTTAATGGAAGGGAG+GGG | + | tig0020780:90498-90517 | Msa1386050:intron | 45.0% |
| !! | GGATTTTAATGGAAGGGAGG+GGG | + | tig0020780:90499-90518 | Msa1386050:intron | 45.0% |
| !! | GATTTTAATGGAAGGGAGGG+GGG | + | tig0020780:90500-90519 | Msa1386050:intron | 45.0% |
| CTCCCATGTTGAACCAAACA+CGG | - | tig0020780:90540-90559 | None:intergenic | 45.0% | |
| ! | GTGTTTGGTTCAACATGGGA+GGG | + | tig0020780:90539-90558 | Msa1386050:intron | 45.0% |
| ! | TGTTTGGTTCAACATGGGAG+GGG | + | tig0020780:90540-90559 | Msa1386050:intron | 45.0% |
| TCAACATGGGAGGGGTTTAA+TGG | + | tig0020780:90548-90567 | Msa1386050:intron | 45.0% | |
| AAAAAGTGGGGGACTTAGAG+GGG | - | tig0020780:90669-90688 | None:intergenic | 45.0% | |
| CAAAAAAGTGGGGGACTTAG+AGG | - | tig0020780:90671-90690 | None:intergenic | 45.0% | |
| GCAAGAGAGCAAAAAAGTGG+GGG | - | tig0020780:90680-90699 | None:intergenic | 45.0% | |
| GGCAAGAGAGCAAAAAAGTG+GGG | - | tig0020780:90681-90700 | None:intergenic | 45.0% | |
| GGGCAAGAGAGCAAAAAAGT+GGG | - | tig0020780:90682-90701 | None:intergenic | 45.0% | |
| AGGGCAAGAGAGCAAAAAAG+TGG | - | tig0020780:90683-90702 | None:intergenic | 45.0% | |
| ! | AGTGCTGAGCAAAATGACAC+AGG | - | tig0020780:90809-90828 | None:intergenic | 45.0% |
| ! | ATTTTGCTCAGCACTCCTAC+TGG | + | tig0020780:90814-90833 | Msa1386050:intron | 45.0% |
| GCAGGATCTTTACTTGTACC+CGG | + | tig0020780:91033-91052 | Msa1386050:CDS | 45.0% | |
| CCAACCACATAACTACAGAG+AGG | - | tig0020780:91163-91182 | None:intergenic | 45.0% | |
| CCTCTCTGTAGTTATGTGGT+TGG | + | tig0020780:91160-91179 | Msa1386050:intron | 45.0% | |
| TGTAGTTATGTGGTTGGCAC+TGG | + | tig0020780:91166-91185 | Msa1386050:intron | 45.0% | |
| GACCTTTAAGCAAATCGACC+TGG | - | tig0020780:91317-91336 | None:intergenic | 45.0% | |
| TATGCAGGTATGAGGAAGCT+AGG | + | tig0020780:91490-91509 | Msa1386050:intron | 45.0% | |
| ATGCAGGTATGAGGAAGCTA+GGG | + | tig0020780:91491-91510 | Msa1386050:intron | 45.0% | |
| GCGAGAAGATTTCAGTGACA+TGG | + | tig0020780:91536-91555 | Msa1386050:CDS | 45.0% | |
| TTTCAGTGACATGGTTGCAG+AGG | + | tig0020780:91545-91564 | Msa1386050:CDS | 45.0% | |
| TAGCTATAACTGTTTCGGGC+AGG | + | tig0020780:91829-91848 | Msa1386050:three_prime_UTR | 45.0% | |
| !! | AAAAAAAAAAAATCAATTAA+GGG | - | tig0020780:85133-85152 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAATCAATTA+AGG | - | tig0020780:85134-85153 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTATAGAA+TGG | + | tig0020780:86196-86215 | Msa1386050:intron | 5.0% |
| !!! | TTATTTTACTTATATATTAT+TGG | + | tig0020780:88882-88901 | Msa1386050:intron | 5.0% |
| TTTCCTTGATGTGAAGGCGG+TGG | + | tig0020780:84446-84465 | Msa1386050:five_prime_UTR | 50.0% | |
| AATCCACCGCCTTCACATCA+AGG | - | tig0020780:84452-84471 | None:intergenic | 50.0% | |
| ! | TCTCCACAACGACTCCGTTT+TGG | - | tig0020780:84586-84605 | None:intergenic | 50.0% |
| GGAGAATACTGATCCGAAGC+AGG | + | tig0020780:84601-84620 | Msa1386050:CDS | 50.0% | |
| TGCAGCAGATCCTAAGTTGC+TGG | + | tig0020780:85626-85645 | Msa1386050:CDS | 50.0% | |
| GGAACACTGTACCTGTACCT+AGG | + | tig0020780:85667-85686 | Msa1386050:CDS | 50.0% | |
| CTGTACCTGTACCTAGGCAT+TGG | + | tig0020780:85673-85692 | Msa1386050:CDS | 50.0% | |
| TGTGACCAATGCCTAGGTAC+AGG | - | tig0020780:85681-85700 | None:intergenic | 50.0% | |
| !! | ATCACCAATCCTGGACTGGT+AGG | + | tig0020780:85886-85905 | Msa1386050:intron | 50.0% |
| AACACCTACCAGTCCAGGAT+TGG | - | tig0020780:85893-85912 | None:intergenic | 50.0% | |
| !! | ATCCTGGACTGGTAGGTGTT+TGG | + | tig0020780:85893-85912 | Msa1386050:intron | 50.0% |
| TTCCAAACACCTACCAGTCC+AGG | - | tig0020780:85898-85917 | None:intergenic | 50.0% | |
| TCGTGAGGGAGAAGTAGCTT+GGG | + | tig0020780:86459-86478 | Msa1386050:intron | 50.0% | |
| ACAGACCGTGACCGTGAAAA+TGG | + | tig0020780:86531-86550 | Msa1386050:intron | 50.0% | |
| TTGTTGTGGGCAGGCCTAAT+TGG | + | tig0020780:86784-86803 | Msa1386050:intron | 50.0% | |
| TGTTGTGGGCAGGCCTAATT+GGG | + | tig0020780:86785-86804 | Msa1386050:intron | 50.0% | |
| !!! | TTGTTTTGGCAGGGGAAACG+AGG | + | tig0020780:87035-87054 | Msa1386050:intron | 50.0% |
| CCAGTGGCAGCAATGAAATC+AGG | - | tig0020780:87086-87105 | None:intergenic | 50.0% | |
| CCTGATTTCATTGCTGCCAC+TGG | + | tig0020780:87083-87102 | Msa1386050:CDS | 50.0% | |
| !!! | TTTTGGGATGGATGGGTTGC+TGG | + | tig0020780:87415-87434 | Msa1386050:intron | 50.0% |
| AAGCCAAAGCTGACATCCCT+TGG | + | tig0020780:87962-87981 | Msa1386050:CDS | 50.0% | |
| AGCCAAAGCTGACATCCCTT+GGG | + | tig0020780:87963-87982 | Msa1386050:CDS | 50.0% | |
| CTTCGTGATACAACTCCCCA+AGG | - | tig0020780:87982-88001 | None:intergenic | 50.0% | |
| CTTGGGGAGTTGTATCACGA+AGG | + | tig0020780:87980-87999 | Msa1386050:CDS | 50.0% | |
| !! | GGCCCAACGATTGATTTGAG+TGG | + | tig0020780:88196-88215 | Msa1386050:intron | 50.0% |
| GTTTGTTTCCCACCACCTGA+TGG | + | tig0020780:88403-88422 | Msa1386050:intron | 50.0% | |
| GAAGAGAATGGGAGAAGGAG+AGG | - | tig0020780:88575-88594 | None:intergenic | 50.0% | |
| CTTTCGTCAAAAGAGGGGCT+TGG | - | tig0020780:88752-88771 | None:intergenic | 50.0% | |
| ! | GATGACATTGGTTGGTGTGC+AGG | + | tig0020780:88923-88942 | Msa1386050:intron | 50.0% |
| AGAAGCTCTTGGTATGCCTG+AGG | + | tig0020780:88992-89011 | Msa1386050:CDS | 50.0% | |
| GAAGCTCTTGGTATGCCTGA+GGG | + | tig0020780:88993-89012 | Msa1386050:CDS | 50.0% | |
| TGGTGGAGGACCATATCTCT+GGG | - | tig0020780:89124-89143 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGGACCATATCTC+TGG | - | tig0020780:89125-89144 | None:intergenic | 50.0% |
| TTCAGCTGAGGGTAAGATGG+TGG | - | tig0020780:89141-89160 | None:intergenic | 50.0% | |
| !! | GTATGGGAGCATTCAGTCCT+GGG | - | tig0020780:89167-89186 | None:intergenic | 50.0% |
| TAACCAAAGCTAGCTCCAGC+GGG | - | tig0020780:89189-89208 | None:intergenic | 50.0% | |
| ! | GGTTATCATCCTGGTGGATG+GGG | + | tig0020780:89204-89223 | Msa1386050:CDS | 50.0% |
| CAGTATGGACGCCCACTATA+TGG | + | tig0020780:89326-89345 | Msa1386050:intron | 50.0% | |
| TGCTGGTGTCCTCATTATGC+AGG | + | tig0020780:89873-89892 | Msa1386050:intron | 50.0% | |
| ! | CTGGCTCTTCCTGCATAATG+AGG | - | tig0020780:89885-89904 | None:intergenic | 50.0% |
| AGAGGAAGAAGAAGAGGAGG+AGG | + | tig0020780:89954-89973 | Msa1386050:CDS | 50.0% | |
| GGAGGAGGAAGAAGAAGGAA+TGG | + | tig0020780:89972-89991 | Msa1386050:CDS | 50.0% | |
| TGGATATGCAGGTCCCACTT+AGG | + | tig0020780:90446-90465 | Msa1386050:intron | 50.0% | |
| GGATATGCAGGTCCCACTTA+GGG | + | tig0020780:90447-90466 | Msa1386050:intron | 50.0% | |
| ! | CGTGTTTGGTTCAACATGGG+AGG | + | tig0020780:90538-90557 | Msa1386050:intron | 50.0% |
| CACTGGCACCCAGGATAAAT+CGG | + | tig0020780:91183-91202 | Msa1386050:CDS | 50.0% | |
| ACTGGCACCCAGGATAAATC+GGG | + | tig0020780:91184-91203 | Msa1386050:CDS | 50.0% | |
| ! | AGTGGACGTCACTTTACTGC+CGG | + | tig0020780:91350-91369 | Msa1386050:CDS | 50.0% |
| CACTTTACTGCCGGAAGAGT+TGG | + | tig0020780:91359-91378 | Msa1386050:CDS | 50.0% | |
| TCCATGGCTTCCAACTCTTC+CGG | - | tig0020780:91372-91391 | None:intergenic | 50.0% | |
| ! | GGCAGGCAGAACATTTTCCA+TGG | - | tig0020780:91388-91407 | None:intergenic | 50.0% |
| TAAACCCTCGACGATGGCTG+CGG | + | tig0020780:84547-84566 | Msa1386050:exon | 55.0% | |
| ATGTGGTTCTTGCAGGGGAG+CGG | + | tig0020780:85855-85874 | Msa1386050:intron | 55.0% | |
| GCTGTGGCAATCACCAATCC+TGG | + | tig0020780:85877-85896 | Msa1386050:CDS | 55.0% | |
| GGCAATCACCAATCCTGGAC+TGG | + | tig0020780:85882-85901 | Msa1386050:CDS | 55.0% | |
| CAAGCTACTTCTCCCTCACG+AGG | - | tig0020780:86460-86479 | None:intergenic | 55.0% | |
| CTCGTGAGGGAGAAGTAGCT+TGG | + | tig0020780:86458-86477 | Msa1386050:intron | 55.0% | |
| GTTGTGGGCAGGCCTAATTG+GGG | + | tig0020780:86786-86805 | Msa1386050:intron | 55.0% | |
| GCCAAAGCTGACATCCCTTG+GGG | + | tig0020780:87964-87983 | Msa1386050:CDS | 55.0% | |
| TCCCCAAGGGATGTCAGCTT+TGG | - | tig0020780:87968-87987 | None:intergenic | 55.0% | |
| GGTGGAGGACCATATCTCTG+GGG | - | tig0020780:89123-89142 | None:intergenic | 55.0% | |
| ! | AGCTGAGGGTAAGATGGTGG+AGG | - | tig0020780:89138-89157 | None:intergenic | 55.0% |
| TACCCTCAGCTGAAGATCCC+AGG | + | tig0020780:89147-89166 | Msa1386050:CDS | 55.0% | |
| GTCCTGGGATCTTCAGCTGA+GGG | - | tig0020780:89152-89171 | None:intergenic | 55.0% | |
| AGTCCTGGGATCTTCAGCTG+AGG | - | tig0020780:89153-89172 | None:intergenic | 55.0% | |
| !! | GGTATGGGAGCATTCAGTCC+TGG | - | tig0020780:89168-89187 | None:intergenic | 55.0% |
| AAGCTAGCTCCAGCGGGTAT+GGG | - | tig0020780:89183-89202 | None:intergenic | 55.0% | |
| AAAGCTAGCTCCAGCGGGTA+TGG | - | tig0020780:89184-89203 | None:intergenic | 55.0% | |
| ! | ATACCCGCTGGAGCTAGCTT+TGG | + | tig0020780:89183-89202 | Msa1386050:CDS | 55.0% |
| ! | ACACTGGGGTGATTTGGAGG+AGG | + | tig0020780:89918-89937 | Msa1386050:CDS | 55.0% |
| ! | TGATTTGGAGGAGGAGGAGG+AGG | + | tig0020780:89927-89946 | Msa1386050:CDS | 55.0% |
| GGAAGAAGAAGAGGAGGAGG+AGG | + | tig0020780:89957-89976 | Msa1386050:CDS | 55.0% | |
| GAGGAGGAGGAGGAAGAAGA+AGG | + | tig0020780:89937-89956 | Msa1386050:CDS | 55.0% | |
| GGTCCCACTTAGGGTCTGTT+AGG | + | tig0020780:90456-90475 | Msa1386050:intron | 55.0% | |
| TCAGGTGTCTCCACTCCAGT+AGG | - | tig0020780:90832-90851 | None:intergenic | 55.0% | |
| CAGGTATGAGGAAGCTAGGG+AGG | + | tig0020780:91494-91513 | Msa1386050:intron | 55.0% | |
| GGACGGCAAGTCGAAGAAGA+AGG | + | tig0020780:91702-91721 | Msa1386050:CDS | 55.0% | |
| GTTACCGCAGCCATCGTCGA+GGG | - | tig0020780:84554-84573 | None:intergenic | 60.0% | |
| TGTTACCGCAGCCATCGTCG+AGG | - | tig0020780:84555-84574 | None:intergenic | 60.0% | |
| CGCGAGATTTGCGACTCCTG+AGG | + | tig0020780:86507-86526 | Msa1386050:intron | 60.0% | |
| ACGGTCACGGTCTGTTCCTC+AGG | - | tig0020780:86526-86545 | None:intergenic | 60.0% | |
| CTGAATGCTCCCATACCCGC+TGG | + | tig0020780:89171-89190 | Msa1386050:CDS | 60.0% | |
| ! | CTGGGGTGATTTGGAGGAGG+AGG | + | tig0020780:89921-89940 | Msa1386050:CDS | 60.0% |
| ! | GGGTGATTTGGAGGAGGAGG+AGG | + | tig0020780:89924-89943 | Msa1386050:CDS | 60.0% |
| GGAGGAGGAGGAGGAAGAAG+AGG | + | tig0020780:89936-89955 | Msa1386050:CDS | 60.0% | |
| GCTCAGCACTCCTACTGGAG+TGG | + | tig0020780:90819-90838 | Msa1386050:intron | 60.0% | |
| GCCGGAAGAGTTGGAAGCCA+TGG | + | tig0020780:91368-91387 | Msa1386050:CDS | 60.0% | |
| TTCTTGCAGGGGAGCGGCTG+TGG | + | tig0020780:85861-85880 | Msa1386050:intron | 65.0% | |
| !! | CATGGAGGAGGAGCACCCTC+AGG | - | tig0020780:89011-89030 | None:intergenic | 65.0% |
| !! | CTGAGGGTGCTCCTCCTCCA+TGG | + | tig0020780:89009-89028 | Msa1386050:CDS | 65.0% |
| !! | TGTGGTTGGCACTGGCACCC+AGG | + | tig0020780:91174-91193 | Msa1386050:CDS | 65.0% |
| GGAGGCTTGCCCCATCCACC+AGG | - | tig0020780:89216-89235 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020780 | gene | 84445 | 91857 | 84445 | ID=Msa1386050;Name=Msa1386050 |
| tig0020780 | mRNA | 84445 | 91857 | 84445 | ID=Msa1386050-mRNA-1;Parent=Msa1386050;Name=Msa1386050-mRNA-1;_AED=0.16;_eAED=0.16;_QI=115|0.94|0.94|1|1|1|19|119|529 |
| tig0020780 | exon | 84445 | 84622 | 84445 | ID=Msa1386050-mRNA-1:exon:9918;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 85011 | 85118 | 85011 | ID=Msa1386050-mRNA-1:exon:9919;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 85221 | 85346 | 85221 | ID=Msa1386050-mRNA-1:exon:9920;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 85451 | 85513 | 85451 | ID=Msa1386050-mRNA-1:exon:9921;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 85612 | 85694 | 85612 | ID=Msa1386050-mRNA-1:exon:9922;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 85870 | 85903 | 85870 | ID=Msa1386050-mRNA-1:exon:9923;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 87047 | 87124 | 87047 | ID=Msa1386050-mRNA-1:exon:9924;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 87710 | 87802 | 87710 | ID=Msa1386050-mRNA-1:exon:9925;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 87929 | 88015 | 87929 | ID=Msa1386050-mRNA-1:exon:9926;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 88945 | 89046 | 88945 | ID=Msa1386050-mRNA-1:exon:9927;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 89126 | 89245 | 89126 | ID=Msa1386050-mRNA-1:exon:9928;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 89329 | 89388 | 89329 | ID=Msa1386050-mRNA-1:exon:9929;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 89895 | 90043 | 89895 | ID=Msa1386050-mRNA-1:exon:9930;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 90825 | 90909 | 90825 | ID=Msa1386050-mRNA-1:exon:9931;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 91003 | 91061 | 91003 | ID=Msa1386050-mRNA-1:exon:9932;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 91171 | 91216 | 91171 | ID=Msa1386050-mRNA-1:exon:9933;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 91318 | 91409 | 91318 | ID=Msa1386050-mRNA-1:exon:9934;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 91497 | 91566 | 91497 | ID=Msa1386050-mRNA-1:exon:9935;Parent=Msa1386050-mRNA-1 |
| tig0020780 | exon | 91667 | 91857 | 91667 | ID=Msa1386050-mRNA-1:exon:9936;Parent=Msa1386050-mRNA-1 |
| tig0020780 | five_prime_UTR | 84445 | 84559 | 84445 | ID=Msa1386050-mRNA-1:five_prime_utr;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 84560 | 84622 | 84560 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 85011 | 85118 | 85011 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 85221 | 85346 | 85221 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 85451 | 85513 | 85451 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 85612 | 85694 | 85612 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 85870 | 85903 | 85870 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 87047 | 87124 | 87047 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 87710 | 87802 | 87710 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 87929 | 88015 | 87929 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 88945 | 89046 | 88945 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 89126 | 89245 | 89126 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 89329 | 89388 | 89329 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 89895 | 90043 | 89895 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 90825 | 90909 | 90825 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 91003 | 91061 | 91003 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 91171 | 91216 | 91171 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 91318 | 91409 | 91318 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 91497 | 91566 | 91497 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | CDS | 91667 | 91738 | 91667 | ID=Msa1386050-mRNA-1:cds;Parent=Msa1386050-mRNA-1 |
| tig0020780 | three_prime_UTR | 91739 | 91857 | 91739 | ID=Msa1386050-mRNA-1:three_prime_utr;Parent=Msa1386050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
