AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272450 MtrunA17_Chr2g0282041 87.567 563 23 7 1 519 1 560 0.0 886
Msa0272450 MtrunA17_Chr4g0047751 86.051 509 59 7 28 531 78 579 0.0 794
Msa0272450 MtrunA17_Chr2g0313531 58.182 165 28 3 1 124 1 165 1.12e-44 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272450 AT4G21660.1 77.930 512 99 8 15 518 67 572 0.0 735
Msa0272450 AT4G21660.2 76.291 523 102 8 15 518 67 586 0.0 730
Msa0272450 AT4G21660.3 81.667 360 60 4 162 518 310 666 0.0 560
Msa0272450 AT4G21660.3 73.944 142 32 3 15 151 67 208 1.43e-51 187
Msa0272450 AT1G11520.1 66.957 115 34 3 381 494 85 196 3.82e-40 144

Find 150 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAGGTCGATTTGCTTAA+AGG 0.211596 2_3:+3987921 Msa0272450:intron
AGGATAAATCGGGTGCTAAA+AGG 0.234213 2_3:+3987803 Msa0272450:CDS
CGCCTTCACATCAAGGAAAT+TGG 0.256686 2_3:-3981145 None:intergenic
GACTAAACACTGGGGTGATT+TGG 0.294704 2_3:+3986522 Msa0272450:CDS
TGATTTGGAGGAGGAGGAGG+AGG 0.308929 2_3:+3986537 Msa0272450:CDS
CATAGTAGCTATAACTGTTT+CGG 0.324690 2_3:+3988432 Msa0272450:three_prime_UTR
GGGTGATTTGGAGGAGGAGG+AGG 0.331062 2_3:+3986534 Msa0272450:CDS
TCTCCGCAACGACTCCGTTT+TGG 0.339722 2_3:-3981286 None:intergenic
CACTGGCACCCAGGATAAAT+CGG 0.339913 2_3:+3987792 Msa0272450:CDS
CAGTATGGACGCCCACTATA+TGG 0.344701 2_3:+3985936 Msa0272450:intron
ATGTCAGCTTTGGCTTTGTT+TGG 0.352303 2_3:-3984565 None:intergenic
CGTATCAAACAAGAAGAAAA+AGG 0.355646 2_3:+3982052 Msa0272450:CDS
TTCTTGCAGGGGAGCGGCTG+TGG 0.371015 2_3:+3982588 Msa0272450:intron
TCCATGGCTTCCAACTCTTC+CGG 0.371328 2_3:-3987978 None:intergenic
AAAGCTAGCTCCAGCGGGTA+TGG 0.384929 2_3:-3985791 None:intergenic
ATAGTAGCTATAACTGTTTC+GGG 0.391494 2_3:+3988433 Msa0272450:three_prime_UTR
TCCCCAAGGGATGTCAGCTT+TGG 0.394039 2_3:-3984575 None:intergenic
TGCAGCAGATCCTAAGTTGC+TGG 0.399151 2_3:+3982353 Msa0272450:CDS
TTGGTTATCATCCTGGTGGA+TGG 0.399555 2_3:+3985812 Msa0272450:CDS
TTAAAGCAAACCTCATAGTT+AGG 0.402212 2_3:-3985987 None:intergenic
AAAATTTACATACGTGTGTC+CGG 0.405526 2_3:-3987661 None:intergenic
ACGGAAGCAACAGAGAAATA+AGG 0.414634 2_3:+3987473 Msa0272450:CDS
TGGTTATCATCCTGGTGGAT+GGG 0.416487 2_3:+3985813 Msa0272450:CDS
GGAAGAAGAAGAGGAGGAGG+AGG 0.417125 2_3:+3986567 Msa0272450:CDS
ACTTGATAAAGAGGCTTCTC+AGG 0.422146 2_3:-3987498 None:intergenic
AGAGGAAGAAGAAGAGGAGG+AGG 0.423172 2_3:+3986564 Msa0272450:CDS
TTCTCCTCTCTGTAGTTATG+TGG 0.425409 2_3:+3987765 Msa0272450:intron
CCTGATTTCATTGCTGCCAC+TGG 0.430702 2_3:+3983705 Msa0272450:CDS
GGAGGAGGAAGAAGAAGGAA+TGG 0.431152 2_3:+3986582 Msa0272450:CDS
CCTTCAAAGTCTACCTTCTC+TGG 0.435209 2_3:-3981762 None:intergenic
CTGAGGGTGCTCCTCCTCCA+TGG 0.436159 2_3:+3985619 Msa0272450:CDS
GCTAGCTTTGGTTATCATCC+TGG 0.441107 2_3:+3985805 Msa0272450:CDS
CACTTTACTGCCGGAAGAGT+TGG 0.443843 2_3:+3987968 Msa0272450:CDS
GGATAAATCGGGTGCTAAAA+GGG 0.449282 2_3:+3987804 Msa0272450:CDS
AAGCCAAAGCTGACATCCCT+TGG 0.451340 2_3:+3984572 Msa0272450:CDS
TGTAGTTATGTGGTTGGCAC+TGG 0.451870 2_3:+3987775 Msa0272450:intron
ATACCCGCTGGAGCTAGCTT+TGG 0.455254 2_3:+3985793 Msa0272450:CDS
TATGCAGGTATGAGGAAGCT+AGG 0.456420 2_3:+3988099 Msa0272450:intron
AGCCAAAGCTGACATCCCTT+GGG 0.457408 2_3:+3984573 Msa0272450:CDS
GGTTATCATCCTGGTGGATG+GGG 0.459842 2_3:+3985814 Msa0272450:CDS
CAGTGTTTAGTCTTATCAAC+TGG 0.461610 2_3:-3986511 None:intergenic
CGAGGGTTTAAGAGAAATTG+AGG 0.470800 2_3:-3981237 None:intergenic
GCTGTGGCAATCACCAATCC+TGG 0.472614 2_3:+3982604 Msa0272450:CDS
CCAGTGGCAGCAATGAAATC+AGG 0.472805 2_3:-3983705 None:intergenic
TATTTCTCTGTTGCTTCCGT+AGG 0.476260 2_3:-3987470 None:intergenic
TATGAGTTAAACAAGTTCTC+TGG 0.477229 2_3:-3988413 None:intergenic
ATACTAGGAAATTGATAAGA+AGG 0.480660 2_3:+3981935 Msa0272450:intron
AGAAGAATTGAAACCTGCTT+CGG 0.481151 2_3:-3981317 None:intergenic
GAGGAGGAGGAGGAAGAAGA+AGG 0.483462 2_3:+3986577 Msa0272450:CDS
AGAAGAGGAAGAAGAAGAGG+AGG 0.486639 2_3:+3986561 Msa0272450:CDS
CCTCTCTGTAGTTATGTGGT+TGG 0.487747 2_3:+3987769 Msa0272450:intron
GGAAGAAGAGGAAGAAGAAG+AGG 0.488078 2_3:+3986558 Msa0272450:CDS
GGAAGAAGAAGGAATGGAAG+AGG 0.491838 2_3:+3986588 Msa0272450:CDS
ATCTTCAGCTGAGGGTAAGA+TGG 0.493392 2_3:-3985751 None:intergenic
CCAGAGAAGGTAGACTTTGA+AGG 0.493845 2_3:+3981762 Msa0272450:CDS
GTATGGGAGCATTCAGTCCT+GGG 0.498463 2_3:-3985774 None:intergenic
TCCATGGCTTATTAATATGC+AGG 0.501939 2_3:+3985635 Msa0272450:CDS
TTCCAAACACCTACCAGTCC+AGG 0.501998 2_3:-3982622 None:intergenic
AAAAGAAATTCATACTTGGC+AGG 0.504336 2_3:-3988011 None:intergenic
AAGCTAGCTCCAGCGGGTAT+GGG 0.504829 2_3:-3985790 None:intergenic
ATTCCTACCTCAACAACATC+AGG 0.507591 2_3:-3982226 None:intergenic
ATGAAATCAGGAAGTTGAAA+GGG 0.508748 2_3:-3983693 None:intergenic
TCTGGATTTATGCAGGTATG+AGG 0.509168 2_3:+3988091 Msa0272450:intron
ACAAGATCAGCCTAACTATG+AGG 0.510458 2_3:+3985977 Msa0272450:CDS
AGGTCAAAAGTCAGATAAAG+TGG 0.510633 2_3:+3987941 Msa0272450:CDS
GAAGGTAGACTTTGAAGGCA+TGG 0.512645 2_3:+3981767 Msa0272450:CDS
GGTATGGGAGCATTCAGTCC+TGG 0.514292 2_3:-3985775 None:intergenic
TGATAAGAAGGATGAGGCGG+AGG 0.517442 2_3:+3981947 Msa0272450:CDS
AGAAAGTATACTTCGTCGAC+AGG 0.517760 2_3:-3985844 None:intergenic
AAGTCGTGTGATAACATACC+AGG 0.517875 2_3:-3985576 None:intergenic
AGAAGAAGGAATGGAAGAGG+AGG 0.521562 2_3:+3986591 Msa0272450:CDS
CTCCAATTTCCTTGATGTGA+AGG 0.522310 2_3:+3981143 None:intergenic
TAAACCCTCGACGATGGCTG+CGG 0.522545 2_3:+3981250 Msa0272450:exon
TTTAGCACCCGATTTATCCT+GGG 0.522600 2_3:-3987800 None:intergenic
GCCGGAAGAGTTGGAAGCCA+TGG 0.523168 2_3:+3987977 Msa0272450:CDS
TACCCTCAGCTGAAGATCCC+AGG 0.525500 2_3:+3985757 Msa0272450:CDS
TAAACACTGGGGTGATTTGG+AGG 0.529324 2_3:+3986525 Msa0272450:CDS
CATGGAGGAGGAGCACCCTC+AGG 0.530319 2_3:-3985618 None:intergenic
GAAGTTGAAACAAAAGCAAA+GGG 0.533046 2_3:+3984346 Msa0272450:CDS
CTCAAGACCTGATGTTGTTG+AGG 0.536900 2_3:+3982219 Msa0272450:CDS
TTCCGTAGGTCAATAACATC+AGG 0.537897 2_3:-3987456 None:intergenic
AACACCTACCAGTCCAGGAT+TGG 0.539428 2_3:-3982617 None:intergenic
ACTGGCACCCAGGATAAATC+GGG 0.540487 2_3:+3987793 Msa0272450:CDS
AATGAAATCAGGAAGTTGAA+AGG 0.540666 2_3:-3983694 None:intergenic
GCAGGCTTATATTGAGAAAG+AGG 0.540854 2_3:+3984316 Msa0272450:intron
GGAGAATACTGATCCGAAGC+AGG 0.544365 2_3:+3981304 Msa0272450:CDS
TTTCCTTGATGTGAAGGCGG+TGG 0.547457 2_3:+3981149 Msa0272450:five_prime_UTR
AGAAGTTGAAACAAAAGCAA+AGG 0.550383 2_3:+3984345 Msa0272450:CDS
CACGACTTGAAAGAAGCTCT+TGG 0.551012 2_3:+3985591 Msa0272450:CDS
TCACGAAGGAAAAGAATTTG+AGG 0.551560 2_3:+3984604 Msa0272450:CDS
GAAGAGGAGGAATTTGAAGA+TGG 0.554526 2_3:+3986604 Msa0272450:CDS
AATCCACCGCCTTCACATCA+AGG 0.556238 2_3:-3981152 None:intergenic
TAGCTATAACTGTTTCGGGC+AGG 0.559786 2_3:+3988437 Msa0272450:three_prime_UTR
GGACGGCAAGTCGAAGAAGA+AGG 0.560843 2_3:+3988311 Msa0272450:CDS
CTGAATGCTCCCATACCCGC+TGG 0.561728 2_3:+3985781 Msa0272450:CDS
CTGGGGTGATTTGGAGGAGG+AGG 0.562341 2_3:+3986531 Msa0272450:CDS
GGAGGCTTGCCCCATCCACC+AGG 0.563012 2_3:-3985823 None:intergenic
AGTGGACGTCACTTTACTGC+CGG 0.566733 2_3:+3987959 Msa0272450:CDS
GGAAATTGATAAGAAGGATG+AGG 0.566793 2_3:+3981941 Msa0272450:intron
CACCTGATGTTATTGACCTA+CGG 0.568343 2_3:+3987454 Msa0272450:CDS
GGCAATCACCAATCCTGGAC+TGG 0.570853 2_3:+3982609 Msa0272450:CDS
GTAACACTTCCTTACCAAAA+CGG 0.572606 2_3:+3981272 Msa0272450:CDS
TGGTGTGCAGGTAAAGTTGA+GGG 0.572723 2_3:+3985545 Msa0272450:intron
TTACCAAAACGGAGTCGTTG+CGG 0.574219 2_3:+3981283 Msa0272450:CDS
TGTGACCAATGCCTAGGTAC+AGG 0.575538 2_3:-3982405 None:intergenic
AGCTGAGGGTAAGATGGTGG+AGG 0.578031 2_3:-3985745 None:intergenic
CTTCGTGATACAACTCCCCA+AGG 0.578300 2_3:-3984589 None:intergenic
GCGAGAAGATTTCAGTGACA+TGG 0.578430 2_3:+3988145 Msa0272450:CDS
CAGGTATGAGGAAGCTAGGG+AGG 0.579280 2_3:+3988103 Msa0272450:intron
ATGTGGTTCTTGCAGGGGAG+CGG 0.585315 2_3:+3982582 Msa0272450:intron
AAATTTACATACGTGTGTCC+GGG 0.587575 2_3:-3987660 None:intergenic
TTCTCTTAAACCCTCGACGA+TGG 0.588795 2_3:+3981244 Msa0272450:exon
ACCTGCATATTAATAAGCCA+TGG 0.590007 2_3:-3985636 None:intergenic
AGTCTGTTGATAGTCTATCA+AGG 0.590579 2_3:+3986632 Msa0272450:CDS
TGGTATTGAGAAAATCAGAC+AGG 0.592292 2_3:+3983725 Msa0272450:CDS
ATTTAGTTTCACTGCTTCAG+AGG 0.596518 2_3:+3981818 Msa0272450:CDS
AGCTTTGGTTATCATCCTGG+TGG 0.598182 2_3:+3985808 Msa0272450:CDS
TAACCAAAGCTAGCTCCAGC+GGG 0.600182 2_3:-3985796 None:intergenic
ATGCAGGTATGAGGAAGCTA+GGG 0.600493 2_3:+3988100 Msa0272450:intron
GTCCTGGGATCTTCAGCTGA+GGG 0.601211 2_3:-3985759 None:intergenic
GTTACCGCAGCCATCGTCGA+GGG 0.603962 2_3:-3981254 None:intergenic
GCAGGATCTTTACTTGTACC+CGG 0.604637 2_3:+3987642 Msa0272450:CDS
GCTCAGCACTCCTACTGGAG+TGG 0.606638 2_3:+3987428 Msa0272450:intron
TTTCAGTGACATGGTTGCAG+AGG 0.609120 2_3:+3988154 Msa0272450:CDS
AAGTTGAGGGAGATGAAACC+TGG 0.609533 2_3:+3985558 Msa0272450:CDS
AGTTGATAAGACTAAACACT+GGG 0.609767 2_3:+3986513 Msa0272450:CDS
AATTGAGTATGTACCAGAGA+AGG 0.613096 2_3:+3981749 Msa0272450:CDS
ATATTAATAAGCCATGGAGG+AGG 0.613756 2_3:-3985630 None:intergenic
CTGTACCTGTACCTAGGCAT+TGG 0.613828 2_3:+3982400 Msa0272450:CDS
AGAAAGATGCAAGAAAAGGA+CGG 0.618296 2_3:+3988294 Msa0272450:CDS
TTCAGCTGAGGGTAAGATGG+TGG 0.618413 2_3:-3985748 None:intergenic
TGTGGTTGGCACTGGCACCC+AGG 0.621505 2_3:+3987783 Msa0272450:CDS
AATTGATAAGAAGGATGAGG+CGG 0.627793 2_3:+3981944 Msa0272450:CDS
TCAGGTGTCTCCACTCCAGT+AGG 0.629943 2_3:-3987438 None:intergenic
GAAGCTCTTGGTATGCCTGA+GGG 0.630070 2_3:+3985603 Msa0272450:CDS
CAATTTCCTTGATGTGAAGG+CGG 0.630272 2_3:+3981146 None:intergenic
ATAACCAAAGCTAGCTCCAG+CGG 0.635047 2_3:-3985797 None:intergenic
ACACTGGGGTGATTTGGAGG+AGG 0.642355 2_3:+3986528 Msa0272450:CDS
AGTCCTGGGATCTTCAGCTG+AGG 0.642746 2_3:-3985760 None:intergenic
CAGTTGATAAGACTAAACAC+TGG 0.643279 2_3:+3986512 Msa0272450:CDS
AAGTATACTTCGTCGACAGG+AGG 0.657544 2_3:-3985841 None:intergenic
GGAACACTGTACCTGTACCT+AGG 0.658691 2_3:+3982394 Msa0272450:CDS
AGAAGCTCTTGGTATGCCTG+AGG 0.662536 2_3:+3985602 Msa0272450:CDS
TTCGTGATACAACTCCCCAA+GGG 0.663464 2_3:-3984588 None:intergenic
TTGGTGTGCAGGTAAAGTTG+AGG 0.667122 2_3:+3985544 Msa0272450:intron
GCCAAAGCTGACATCCCTTG+GGG 0.669292 2_3:+3984574 Msa0272450:CDS
TGTTACCGCAGCCATCGTCG+AGG 0.690229 2_3:-3981255 None:intergenic
CTTGGGGAGTTGTATCACGA+AGG 0.695093 2_3:+3984590 Msa0272450:CDS
TGCATATTAATAAGCCATGG+AGG 0.699081 2_3:-3985633 None:intergenic
GTTGATAAGACTAAACACTG+GGG 0.838951 2_3:+3986514 Msa0272450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr2_3:3988348-3988367 Msa0272450:three_prime_UTR 0.0%
!!! TATTTTTCTTCTTAATATTT+AGG + chr2_3:3981710-3981729 Msa0272450:intron 10.0%
!! ATTTAAAAAAAAAAACAATG+TGG + chr2_3:3987035-3987054 Msa0272450:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGGT+TGG + chr2_3:3988355-3988374 Msa0272450:three_prime_UTR 10.0%
!!! TTGATTTGAATTAAATTGAT+AGG + chr2_3:3981405-3981424 Msa0272450:intron 15.0%
!!! TATTTCATAATTTCATTTTC+AGG + chr2_3:3982317-3982336 Msa0272450:intron 15.0%
!! CATTATAACAAAGATAATAA+AGG - chr2_3:3982671-3982690 None:intergenic 15.0%
!!! ATTATCTTTGTTATAATGAT+TGG + chr2_3:3982673-3982692 Msa0272450:intron 15.0%
!!! TTATCTTTGTTATAATGATT+GGG + chr2_3:3982674-3982693 Msa0272450:intron 15.0%
!! TAATATATTACAGTTCAATA+CGG - chr2_3:3982810-3982829 None:intergenic 15.0%
!! TATAAATTTCAGTTTCATTT+AGG + chr2_3:3983006-3983025 Msa0272450:intron 15.0%
!! ATAAATTTCAGTTTCATTTA+GGG + chr2_3:3983007-3983026 Msa0272450:intron 15.0%
!!! TTGTTTTCAAGATTATAAAT+TGG - chr2_3:3983091-3983110 None:intergenic 15.0%
!! ATAAATAATTGAAGATAAAG+AGG - chr2_3:3983557-3983576 None:intergenic 15.0%
!! AATCTCAAGATTATTTAAAT+AGG + chr2_3:3983964-3983983 Msa0272450:intron 15.0%
!!! TAAAGAATTTATGTAGATTT+TGG + chr2_3:3984008-3984027 Msa0272450:intron 15.0%
!!! AAAGAATTTATGTAGATTTT+GGG + chr2_3:3984009-3984028 Msa0272450:intron 15.0%
!! TAAATGAACTTTATATGAAA+TGG + chr2_3:3984198-3984217 Msa0272450:intron 15.0%
!! AATAAAATTGTAAAACACAA+AGG - chr2_3:3984434-3984453 None:intergenic 15.0%
!! TAAAATAGTTATAGAACATA+TGG - chr2_3:3984481-3984500 None:intergenic 15.0%
!! AAATATAACTATTAGAAAGT+AGG - chr2_3:3984507-3984526 None:intergenic 15.0%
!! TTTCTAATAGTTATATTTCT+TGG + chr2_3:3984509-3984528 Msa0272450:intron 15.0%
!!! TCGTTTTCTTTTAATTATTT+AGG + chr2_3:3984835-3984854 Msa0272450:intron 15.0%
!! TATACTACTGAAATTATTAT+TGG + chr2_3:3984953-3984972 Msa0272450:intron 15.0%
!! ATACTACTGAAATTATTATT+GGG + chr2_3:3984954-3984973 Msa0272450:intron 15.0%
!! AATATTTCATACATTTACAT+TGG - chr2_3:3985142-3985161 None:intergenic 15.0%
!! TTACTTATATATTATTGGAA+CGG + chr2_3:3985497-3985516 Msa0272450:intron 15.0%
!!! ATAAATTCACTGTTTATTTT+TGG + chr2_3:3985869-3985888 Msa0272450:intron 15.0%
!!! ATAATTGATTTTCTTTATGT+TGG - chr2_3:3986824-3986843 None:intergenic 15.0%
!!! TTTTCAATGATATTTGTTTT+AGG + chr2_3:3987862-3987881 Msa0272450:intron 15.0%
!!! TTTCATGTTTTTTTCTTTTT+TGG + chr2_3:3987895-3987914 Msa0272450:intron 15.0%
!! TTGAGGAAAAAATTGAAATA+TGG - chr2_3:3981223-3981242 None:intergenic 20.0%
!! AATCAATATTGTAGTGAATT+AGG + chr2_3:3981472-3981491 Msa0272450:intron 20.0%
!! ATCAATATTGTAGTGAATTA+GGG + chr2_3:3981473-3981492 Msa0272450:intron 20.0%
!! TTGTATATCTAAGTAGATAA+TGG + chr2_3:3981622-3981641 Msa0272450:intron 20.0%
!!! TAGATAATGGTTTTCATAAT+TGG + chr2_3:3981635-3981654 Msa0272450:intron 20.0%
!!! TTGTTTTGAATTTTGATTGA+AGG + chr2_3:3981900-3981919 Msa0272450:intron 20.0%
!!! AAGATTAAACTTTTTCAGAA+TGG - chr2_3:3982150-3982169 None:intergenic 20.0%
!! ATGAAATATCATTTGCATAA+TGG - chr2_3:3982305-3982324 None:intergenic 20.0%
!!! ATAATTTCATTTTCAGGTTT+GGG + chr2_3:3982323-3982342 Msa0272450:intron 20.0%
!! ATCTTATATATGTATGTATG+TGG + chr2_3:3982565-3982584 Msa0272450:intron 20.0%
!!! ACTTGTATTGTTTTATATGA+TGG + chr2_3:3982711-3982730 Msa0272450:intron 20.0%
!!! CTTGTATTGTTTTATATGAT+GGG + chr2_3:3982712-3982731 Msa0272450:intron 20.0%
!!! TTGTATTGTTTTATATGATG+GGG + chr2_3:3982713-3982732 Msa0272450:intron 20.0%
!! TTTATAATCTTGAAAACAAG+TGG + chr2_3:3983092-3983111 Msa0272450:intron 20.0%
!! CAAAAAAGCCATATAATTAT+AGG - chr2_3:3983435-3983454 None:intergenic 20.0%
!!! CTTTTTTGCATGATATTAAT+GGG + chr2_3:3983447-3983466 Msa0272450:intron 20.0%
!! TCAGCATCAATTATATAATT+GGG - chr2_3:3983596-3983615 None:intergenic 20.0%
!! TTAAATAATCTTGAGATTCT+TGG - chr2_3:3983962-3983981 None:intergenic 20.0%
!! AAAAATGGATATAGATTATC+AGG + chr2_3:3984391-3984410 Msa0272450:CDS 20.0%
!! TGTTAAATAAAATCAACAAG+TGG + chr2_3:3984928-3984947 Msa0272450:intron 20.0%
!!! TTTCCAGTATTTTGTTTATT+AGG + chr2_3:3985062-3985081 Msa0272450:intron 20.0%
!!! ACAAGTTTTCACTTTTAATT+TGG + chr2_3:3985464-3985483 Msa0272450:intron 20.0%
!! GTTATACTATTTAATTAGAG+TGG + chr2_3:3986016-3986035 Msa0272450:intron 20.0%
!! ACAATGAAGTTAGAAAAAAT+GGG - chr2_3:3986075-3986094 None:intergenic 20.0%
!! AACAATGAAGTTAGAAAAAA+TGG - chr2_3:3986076-3986095 None:intergenic 20.0%
!!! ATTTTTTCTAACTTCATTGT+TGG + chr2_3:3986075-3986094 Msa0272450:intron 20.0%
!!! TTTTTTCTAACTTCATTGTT+GGG + chr2_3:3986076-3986095 Msa0272450:intron 20.0%
!! CAAAAAGAAAACTACATATA+TGG - chr2_3:3986162-3986181 None:intergenic 20.0%
!!! AGGAATATATTTTGAAGTTT+TGG - chr2_3:3986267-3986286 None:intergenic 20.0%
!!! TTTTTCATTCAACCAATAAA+AGG - chr2_3:3986367-3986386 None:intergenic 20.0%
!!! TTTTAAAGTTGACATTGTAT+GGG - chr2_3:3986426-3986445 None:intergenic 20.0%
!!! ATTTTAAAGTTGACATTGTA+TGG - chr2_3:3986427-3986446 None:intergenic 20.0%
!!! TATTTCTTTTCATAATTTGC+TGG + chr2_3:3986466-3986485 Msa0272450:intron 20.0%
!! ATGTTAACAAGATAATGAAA+TGG - chr2_3:3986671-3986690 None:intergenic 20.0%
!!! CTAGTTTTTTTCTTTTGAAA+GGG + chr2_3:3986770-3986789 Msa0272450:intron 20.0%
!! ATGTTGAGTTATTTATTAGT+AGG + chr2_3:3986938-3986957 Msa0272450:intron 20.0%
!! TGTTGAGTTATTTATTAGTA+GGG + chr2_3:3986939-3986958 Msa0272450:intron 20.0%
!! TCATTTAGTAAATTTATCAG+AGG + chr2_3:3986962-3986981 Msa0272450:intron 20.0%
!!! TTTGGTTCATTTTTTTTAGA+GGG - chr2_3:3987321-3987340 None:intergenic 20.0%
!!! TAGATAACGGAAAAATAAAA+AGG - chr2_3:3987587-3987606 None:intergenic 20.0%
!! TATCAAGAAACAAACAATTA+TGG - chr2_3:3987728-3987747 None:intergenic 20.0%
!!! AAGATGTTTTCTCTTTTAAT+AGG + chr2_3:3987828-3987847 Msa0272450:intron 20.0%
!!! AGATGTTTTCTCTTTTAATA+GGG + chr2_3:3987829-3987848 Msa0272450:intron 20.0%
! ACGAAAATCAAATGAATCAA+AGG - chr2_3:3981365-3981384 None:intergenic 25.0%
!! GATTTTCGTTGTTTATAGAT+TGG + chr2_3:3981376-3981395 Msa0272450:intron 25.0%
! ATACTAGGAAATTGATAAGA+AGG + chr2_3:3981935-3981954 Msa0272450:intron 25.0%
!! ATTGCACAATTAGTTTGAAA+TGG + chr2_3:3982256-3982275 Msa0272450:intron 25.0%
!! ACAATTAGTTTGAAATGGTT+GGG + chr2_3:3982261-3982280 Msa0272450:intron 25.0%
!!! CATAATTTCATTTTCAGGTT+TGG + chr2_3:3982322-3982341 Msa0272450:intron 25.0%
!!! TGGTGTTTTTGAAATCTTAT+CGG + chr2_3:3982373-3982392 Msa0272450:CDS 25.0%
!! ACAGAAAAGAAAATTTTTGC+AGG + chr2_3:3982425-3982444 Msa0272450:intron 25.0%
! CCTATAATAACTATCAAGTT+AGG - chr2_3:3982462-3982481 None:intergenic 25.0%
!! CCTAACTTGATAGTTATTAT+AGG + chr2_3:3982459-3982478 Msa0272450:intron 25.0%
! TGTTATAATGATTGGGAATA+TGG + chr2_3:3982681-3982700 Msa0272450:intron 25.0%
!!! AAATATCCTCGTTTATTTTC+AGG - chr2_3:3983368-3983387 None:intergenic 25.0%
!!! GCTTTTTTGCATGATATTAA+TGG + chr2_3:3983446-3983465 Msa0272450:intron 25.0%
! GTCAGCATCAATTATATAAT+TGG - chr2_3:3983597-3983616 None:intergenic 25.0%
!!! GAATGTTCACTTATTTTGAT+GGG - chr2_3:3983809-3983828 None:intergenic 25.0%
!!! AGAATGTTCACTTATTTTGA+TGG - chr2_3:3983810-3983829 None:intergenic 25.0%
! TACAGAAAAAATGCAATTTC+AGG - chr2_3:3983869-3983888 None:intergenic 25.0%
! AGATTATTTAAATAGGTAGC+TGG + chr2_3:3983971-3983990 Msa0272450:intron 25.0%
! GATTATTTAAATAGGTAGCT+GGG + chr2_3:3983972-3983991 Msa0272450:intron 25.0%
!!! AATTTATGTAGATTTTGGGA+TGG + chr2_3:3984013-3984032 Msa0272450:intron 25.0%
! CAGTAGAGATATGTTATATT+GGG + chr2_3:3984128-3984147 Msa0272450:intron 25.0%
! AGTAGAGATATGTTATATTG+GGG + chr2_3:3984129-3984148 Msa0272450:intron 25.0%
!!! ATATCCATTTTTCCCATTTT+TGG - chr2_3:3984383-3984402 None:intergenic 25.0%
! ACTTAAAAAATGCATCATGA+AGG - chr2_3:3984544-3984563 None:intergenic 25.0%
!!! TCTTCAATACTTTTTAGCAA+GGG - chr2_3:3984635-3984654 None:intergenic 25.0%
!!! TTCTTCAATACTTTTTAGCA+AGG - chr2_3:3984636-3984655 None:intergenic 25.0%
! ATATAGTGTAACTTATGCTT+TGG + chr2_3:3984663-3984682 Msa0272450:intron 25.0%
!!! ATTTATTTCTTGCGACATTT+TGG + chr2_3:3984694-3984713 Msa0272450:intron 25.0%
! TGACCTAATAAACAAAATAC+TGG - chr2_3:3985068-3985087 None:intergenic 25.0%
!! TGAAATATTTCTCTTTTGAG+AGG + chr2_3:3985153-3985172 Msa0272450:intron 25.0%
!!! ATTAGTTTGTATGATGACAT+TGG + chr2_3:3985521-3985540 Msa0272450:intron 25.0%
! AAGCTGGTTAATAAGATAAA+GGG - chr2_3:3985899-3985918 None:intergenic 25.0%
! TAAGCTGGTTAATAAGATAA+AGG - chr2_3:3985900-3985919 None:intergenic 25.0%
! ACAATGTTTACATTAAACAC+AGG - chr2_3:3986193-3986212 None:intergenic 25.0%
!!! CTATTTCTTGATTACTCTTT+TGG + chr2_3:3986292-3986311 Msa0272450:intron 25.0%
!! TTTAAAGTTGACATTGTATG+GGG - chr2_3:3986425-3986444 None:intergenic 25.0%
! ATCTTGTTAACATGTAATGT+AGG + chr2_3:3986678-3986697 Msa0272450:intron 25.0%
!!! ATTTTACCAAAAGAAAGTGT+GGG + chr2_3:3986719-3986738 Msa0272450:intron 25.0%
! GAAAAAAACTAGCAAAATCA+AGG - chr2_3:3986762-3986781 None:intergenic 25.0%
!!! GCTAGTTTTTTTCTTTTGAA+AGG + chr2_3:3986769-3986788 Msa0272450:intron 25.0%
! AAAGGGATTACTATTCTTAA+TGG + chr2_3:3986787-3986806 Msa0272450:intron 25.0%
!! TTGATTTTCTTTATGTTGGT+GGG - chr2_3:3986820-3986839 None:intergenic 25.0%
!!! ATTGATTTTCTTTATGTTGG+TGG - chr2_3:3986821-3986840 None:intergenic 25.0%
! GTCTTTCAATTAAGCTTATT+TGG + chr2_3:3986853-3986872 Msa0272450:intron 25.0%
!!! AGATTTTAAAATACCGTGTT+TGG + chr2_3:3987133-3987152 Msa0272450:intron 25.0%
! TATGACCTCAAATATTACAA+GGG - chr2_3:3987210-3987229 None:intergenic 25.0%
! ATATGACCTCAAATATTACA+AGG - chr2_3:3987211-3987230 None:intergenic 25.0%
! TGAGGTCATATTAATTATAC+AGG + chr2_3:3987220-3987239 Msa0272450:intron 25.0%
!!! TTCATTTTTTTTAGAGGGAA+GGG - chr2_3:3987316-3987335 None:intergenic 25.0%
!!! GTTTGGTTCATTTTTTTTAG+AGG - chr2_3:3987322-3987341 None:intergenic 25.0%
! ATTGACAGTAAATAACTGTA+CGG - chr2_3:3987370-3987389 None:intergenic 25.0%
!! TATTTTTCCGTTATCTATGA+AGG + chr2_3:3987590-3987609 Msa0272450:intron 25.0%
! GAAGAGAAAGAAGAAAAAAT+TGG + chr2_3:3987618-3987637 Msa0272450:CDS 25.0%
!!! TCAATGATATTTGTTTTAGG+AGG + chr2_3:3987865-3987884 Msa0272450:intron 25.0%
! GATGAAAAGAAATTCATACT+TGG - chr2_3:3988018-3988037 None:intergenic 25.0%
! GTTTCTATTTCAGATTTAGT+GGG + chr2_3:3988038-3988057 Msa0272450:intron 25.0%
! AAGTTAGATACAGATCATAA+TGG - chr2_3:3988237-3988256 None:intergenic 25.0%
! TTATGATCTGTATCTAACTT+TGG + chr2_3:3988237-3988256 Msa0272450:intron 25.0%
!! TTTTTCTTTTCTTCTCATTC+TGG - chr2_3:3988275-3988294 None:intergenic 25.0%
! AAAAAGAAAGATGCAAGAAA+AGG + chr2_3:3988290-3988309 Msa0272450:CDS 25.0%
TTTCGTTGTTTATAGATTGG+AGG + chr2_3:3981379-3981398 Msa0272450:intron 30.0%
!! AGGTTTGCTATTGTAATACT+AGG + chr2_3:3981920-3981939 Msa0272450:intron 30.0%
GATAACGAGCAAAAAGAAAA+AGG + chr2_3:3982029-3982048 Msa0272450:CDS 30.0%
CGTATCAAACAAGAAGAAAA+AGG + chr2_3:3982052-3982071 Msa0272450:CDS 30.0%
!! AATTTGTTGTTGTATTCCTG+TGG + chr2_3:3982120-3982139 Msa0272450:intron 30.0%
! CACAATTAGTTTGAAATGGT+TGG + chr2_3:3982260-3982279 Msa0272450:intron 30.0%
TGAAAACGATGAAGTCAATA+AGG + chr2_3:3982539-3982558 Msa0272450:intron 30.0%
AATAAAGGAGAAACAACTCA+AGG - chr2_3:3982656-3982675 None:intergenic 30.0%
!! TGTTTTATATGATGGGGAAT+AGG + chr2_3:3982719-3982738 Msa0272450:intron 30.0%
!! TATGAATTGGTGTTATGGTT+TGG - chr2_3:3982783-3982802 None:intergenic 30.0%
!! GATCTTATGAATTGGTGTTA+TGG - chr2_3:3982788-3982807 None:intergenic 30.0%
TCAATACGGATCTTATGAAT+TGG - chr2_3:3982796-3982815 None:intergenic 30.0%
TTACAAACGAACTAGACTAA+TGG + chr2_3:3982831-3982850 Msa0272450:intron 30.0%
AAAATTGTATAGCAACGGTT+CGG - chr2_3:3982871-3982890 None:intergenic 30.0%
CAAAAAAACAGTTCAACTTG+GGG - chr2_3:3982894-3982913 None:intergenic 30.0%
GCAAAAAAACAGTTCAACTT+GGG - chr2_3:3982895-3982914 None:intergenic 30.0%
! TGTGCATATACAAAAGCTTT+TGG + chr2_3:3982956-3982975 Msa0272450:intron 30.0%
! GAATCCTAAATCCATTTTCA+CGG - chr2_3:3983272-3983291 None:intergenic 30.0%
AAACGAGGATATTTGTAGTT+CGG + chr2_3:3983374-3983393 Msa0272450:intron 30.0%
ATAATTATAGGTCCCCAATT+AGG - chr2_3:3983423-3983442 None:intergenic 30.0%
ATTGGGGACCTATAATTATA+TGG + chr2_3:3983424-3983443 Msa0272450:intron 30.0%
ATGAAATCAGGAAGTTGAAA+GGG - chr2_3:3983696-3983715 None:intergenic 30.0%
AATGAAATCAGGAAGTTGAA+AGG - chr2_3:3983697-3983716 None:intergenic 30.0%
ACACACATATATATGCAAAC+AGG - chr2_3:3983759-3983778 None:intergenic 30.0%
GCAGTAGAGATATGTTATAT+TGG + chr2_3:3984127-3984146 Msa0272450:intron 30.0%
TGAAACAGAAATTCAACAGA+GGG - chr2_3:3984178-3984197 None:intergenic 30.0%
ATGAAACAGAAATTCAACAG+AGG - chr2_3:3984179-3984198 None:intergenic 30.0%
TAGATGAATGTATGTAGCAT+AGG - chr2_3:3984231-3984250 None:intergenic 30.0%
AGAAGTTGAAACAAAAGCAA+AGG + chr2_3:3984345-3984364 Msa0272450:CDS 30.0%
GAAGTTGAAACAAAAGCAAA+GGG + chr2_3:3984346-3984365 Msa0272450:CDS 30.0%
AGTTATATTTCTTGGTTGCT+AGG + chr2_3:3984517-3984536 Msa0272450:intron 30.0%
!!! TTTGGTTTTGTTGTAGTGTT+AGG + chr2_3:3984712-3984731 Msa0272450:intron 30.0%
CTGTGAAGTAAAAGTTACTA+TGG - chr2_3:3984753-3984772 None:intergenic 30.0%
! CATAGTAACTTTTACTTCAC+AGG + chr2_3:3984751-3984770 Msa0272450:intron 30.0%
GAAACAAACTAATGCAAAAG+AGG - chr2_3:3985002-3985021 None:intergenic 30.0%
!! ATATTTCTCTTTTGAGAGGT+TGG + chr2_3:3985157-3985176 Msa0272450:intron 30.0%
TTAGATCTTTCGTCAAAAGA+GGG - chr2_3:3985368-3985387 None:intergenic 30.0%
!! CTTATTCTAGCTTTAACTAG+AGG + chr2_3:3985399-3985418 Msa0272450:intron 30.0%
! ATTTTTCGTTGATCCTGTAT+TGG + chr2_3:3985677-3985696 Msa0272450:intron 30.0%
TAGAACACGTTTAATGTACA+AGG - chr2_3:3985703-3985722 None:intergenic 30.0%
!!! TATTTTTTTCCCCAGAGATA+TGG + chr2_3:3985721-3985740 Msa0272450:intron 30.0%
AGCTGGTTAATAAGATAAAG+GGG - chr2_3:3985898-3985917 None:intergenic 30.0%
GTATCTTCATCTAAACAGTA+TGG + chr2_3:3985921-3985940 Msa0272450:intron 30.0%
CAAAAACATCTCCATATAGT+GGG - chr2_3:3985950-3985969 None:intergenic 30.0%
TTAAAGCAAACCTCATAGTT+AGG - chr2_3:3985990-3986009 None:intergenic 30.0%
ATGAAGTTAGAAAAAATGGG+TGG - chr2_3:3986072-3986091 None:intergenic 30.0%
!!! TTTGAAGTTTTGGATAAGCA+AGG - chr2_3:3986257-3986276 None:intergenic 30.0%
!! AGTTGATAAGACTAAACACT+GGG + chr2_3:3986513-3986532 Msa0272450:CDS 30.0%
! CATTTTACCAAAAGAAAGTG+TGG + chr2_3:3986718-3986737 Msa0272450:intron 30.0%
! AGTAAATTTATCAGAGGTAC+TGG + chr2_3:3986968-3986987 Msa0272450:intron 30.0%
!! GTAAATTTATCAGAGGTACT+GGG + chr2_3:3986969-3986988 Msa0272450:intron 30.0%
AAAAAACAATGTGGATATGC+AGG + chr2_3:3987044-3987063 Msa0272450:intron 30.0%
TTTCACCCTTGTAATATTTG+AGG + chr2_3:3987202-3987221 Msa0272450:intron 30.0%
!!! TCATTTTTTTTAGAGGGAAG+GGG - chr2_3:3987315-3987334 None:intergenic 30.0%
!!! GTTCATTTTTTTTAGAGGGA+AGG - chr2_3:3987317-3987336 None:intergenic 30.0%
TACTCTAAATCTTAGTGGTT+TGG - chr2_3:3987339-3987358 None:intergenic 30.0%
TGGATTACTCTAAATCTTAG+TGG - chr2_3:3987344-3987363 None:intergenic 30.0%
TTGACAGTAAATAACTGTAC+GGG - chr2_3:3987369-3987388 None:intergenic 30.0%
GAAAAACTCACTTGATAAAG+AGG - chr2_3:3987510-3987529 None:intergenic 30.0%
GCTGTTAAAAAATGTTCAGT+AGG - chr2_3:3987532-3987551 None:intergenic 30.0%
AAAGAAGAAAAAATTGGTGC+AGG + chr2_3:3987624-3987643 Msa0272450:CDS 30.0%
AAAATTTACATACGTGTGTC+CGG - chr2_3:3987664-3987683 None:intergenic 30.0%
! TTTCTCTTTTAATAGGGTAG+AGG + chr2_3:3987835-3987854 Msa0272450:intron 30.0%
! TTCTCTTTTAATAGGGTAGA+GGG + chr2_3:3987836-3987855 Msa0272450:intron 30.0%
!!! TTTTCTTTTTTGGAACTTCC+AGG + chr2_3:3987905-3987924 Msa0272450:intron 30.0%
AAAAGAAATTCATACTTGGC+AGG - chr2_3:3988014-3988033 None:intergenic 30.0%
CGTTTCTATTTCAGATTTAG+TGG + chr2_3:3988037-3988056 Msa0272450:intron 30.0%
AAGAAATGATTTCTTACCTC+TGG + chr2_3:3988073-3988092 Msa0272450:intron 30.0%
AACTAACCCTACTAATCATA+TGG + chr2_3:3988183-3988202 Msa0272450:intron 30.0%
ACTAACCCTACTAATCATAT+GGG + chr2_3:3988184-3988203 Msa0272450:intron 30.0%
! ATCTAACTTTGGTCTTTATC+TGG + chr2_3:3988248-3988267 Msa0272450:intron 30.0%
TATGAGTTAAACAAGTTCTC+TGG - chr2_3:3988416-3988435 None:intergenic 30.0%
CATAGTAGCTATAACTGTTT+CGG + chr2_3:3988432-3988451 Msa0272450:three_prime_UTR 30.0%
ATAGTAGCTATAACTGTTTC+GGG + chr2_3:3988433-3988452 Msa0272450:three_prime_UTR 30.0%
GTAACACTTCCTTACCAAAA+CGG + chr2_3:3981272-3981291 Msa0272450:CDS 35.0%
AGAAGAATTGAAACCTGCTT+CGG - chr2_3:3981320-3981339 None:intergenic 35.0%
AATTGAGTATGTACCAGAGA+AGG + chr2_3:3981749-3981768 Msa0272450:CDS 35.0%
! ATTTAGTTTCACTGCTTCAG+AGG + chr2_3:3981818-3981837 Msa0272450:CDS 35.0%
! TTTTGTCGTTGCAACTTCTT+TGG + chr2_3:3981873-3981892 Msa0272450:intron 35.0%
GGAAATTGATAAGAAGGATG+AGG + chr2_3:3981941-3981960 Msa0272450:intron 35.0%
AATTGATAAGAAGGATGAGG+CGG + chr2_3:3981944-3981963 Msa0272450:CDS 35.0%
TTCAAAAACACCAGCAACTT+AGG - chr2_3:3982366-3982385 None:intergenic 35.0%
AATGATGTAAGCATGTCTGA+TGG + chr2_3:3982484-3982503 Msa0272450:intron 35.0%
ATTACTACATCACTCATGCA+GGG - chr2_3:3982515-3982534 None:intergenic 35.0%
TATTACTACATCACTCATGC+AGG - chr2_3:3982516-3982535 None:intergenic 35.0%
TGCATGAGTGATGTAGTAAT+AGG + chr2_3:3982515-3982534 Msa0272450:intron 35.0%
GCATGAGTGATGTAGTAATA+GGG + chr2_3:3982516-3982535 Msa0272450:intron 35.0%
TGGGGAAAATTGTATAGCAA+CGG - chr2_3:3982876-3982895 None:intergenic 35.0%
CGCAAAAAAACAGTTCAACT+TGG - chr2_3:3982896-3982915 None:intergenic 35.0%
! TATACAAAAGCTTTTGGCGA+TGG + chr2_3:3982962-3982981 Msa0272450:intron 35.0%
ATGGATGAAACAGTGGTTAT+GGG + chr2_3:3982981-3983000 Msa0272450:intron 35.0%
AGGGATTAATTCCCAAATTG+TGG + chr2_3:3983026-3983045 Msa0272450:intron 35.0%
GGGATTAATTCCCAAATTGT+GGG + chr2_3:3983027-3983046 Msa0272450:intron 35.0%
AATTCCCAAATTGTGGGAAA+AGG + chr2_3:3983033-3983052 Msa0272450:intron 35.0%
ATTCCCAAATTGTGGGAAAA+GGG + chr2_3:3983034-3983053 Msa0272450:intron 35.0%
! ATTCCCTTTTCCCACAATTT+GGG - chr2_3:3983040-3983059 None:intergenic 35.0%
! TAAATCCATTTTCACGGTCA+CGG - chr2_3:3983266-3983285 None:intergenic 35.0%
CATTGATAGAGAGAGGATTT+AGG + chr2_3:3983294-3983313 Msa0272450:intron 35.0%
! AGAGGATTTAGGTTTACAAG+CGG + chr2_3:3983305-3983324 Msa0272450:intron 35.0%
!!! TCCTCGTTTATTTTCAGGTT+CGG - chr2_3:3983363-3983382 None:intergenic 35.0%
!!! TTCGGTTCAGTTTTTTGTTG+TGG + chr2_3:3983392-3983411 Msa0272450:intron 35.0%
!!! TCGGTTCAGTTTTTTGTTGT+GGG + chr2_3:3983393-3983412 Msa0272450:intron 35.0%
TGGGTATTTATTCACGACAA+AGG + chr2_3:3983466-3983485 Msa0272450:intron 35.0%
!! CAGAAGCTGTGTTATTGTTT+TGG + chr2_3:3983643-3983662 Msa0272450:intron 35.0%
! TCTGATTTTCTCAATACCAG+TGG - chr2_3:3983724-3983743 None:intergenic 35.0%
! TGGTATTGAGAAAATCAGAC+AGG + chr2_3:3983725-3983744 Msa0272450:CDS 35.0%
!!! TGTTCACTTATTTTGATGGG+AGG - chr2_3:3983806-3983825 None:intergenic 35.0%
!!! TATGTAGATTTTGGGATGGA+TGG + chr2_3:3984017-3984036 Msa0272450:intron 35.0%
!!! ATGTAGATTTTGGGATGGAT+GGG + chr2_3:3984018-3984037 Msa0272450:intron 35.0%
ACTTATAGCAAGTTAGAGTG+TGG + chr2_3:3984066-3984085 Msa0272450:intron 35.0%
CTTATAGCAAGTTAGAGTGT+GGG + chr2_3:3984067-3984086 Msa0272450:intron 35.0%
TGTTATATTGGGGATGTTGA+TGG + chr2_3:3984139-3984158 Msa0272450:intron 35.0%
AAACAGCAACTACAACAATC+TGG - chr2_3:3984273-3984292 None:intergenic 35.0%
GAACGTATGCAACCAAAAAT+GGG + chr2_3:3984368-3984387 Msa0272450:CDS 35.0%
GCAACCAAAAATGGGAAAAA+TGG + chr2_3:3984376-3984395 Msa0272450:CDS 35.0%
TCACGAAGGAAAAGAATTTG+AGG + chr2_3:3984604-3984623 Msa0272450:CDS 35.0%
! TAACTTTTACTTCACAGGAG+TGG + chr2_3:3984756-3984775 Msa0272450:intron 35.0%
GATCTCTAATGTTGAGCAAT+AGG + chr2_3:3984778-3984797 Msa0272450:intron 35.0%
AATGTTGAGCAATAGGTGTT+TGG + chr2_3:3984785-3984804 Msa0272450:intron 35.0%
TTCCACTCAAATCAATCGTT+GGG - chr2_3:3984811-3984830 None:intergenic 35.0%
! CAATCTATGTTTTTCCCATC+AGG - chr2_3:3985031-3985050 None:intergenic 35.0%
AGAAAGACACAAAATGGAGA+AGG - chr2_3:3985216-3985235 None:intergenic 35.0%
TTCGAGAGAAAGACACAAAA+TGG - chr2_3:3985222-3985241 None:intergenic 35.0%
TAGATCTTTCGTCAAAAGAG+GGG - chr2_3:3985367-3985386 None:intergenic 35.0%
CTTAGATCTTTCGTCAAAAG+AGG - chr2_3:3985369-3985388 None:intergenic 35.0%
GTTTGTATGATGACATTGGT+TGG + chr2_3:3985525-3985544 Msa0272450:intron 35.0%
ATATTAATAAGCCATGGAGG+AGG - chr2_3:3985633-3985652 None:intergenic 35.0%
TGCATATTAATAAGCCATGG+AGG - chr2_3:3985636-3985655 None:intergenic 35.0%
TCCATGGCTTATTAATATGC+AGG + chr2_3:3985635-3985654 Msa0272450:CDS 35.0%
ACCTGCATATTAATAAGCCA+TGG - chr2_3:3985639-3985658 None:intergenic 35.0%
GGCTTATTAATATGCAGGTA+AGG + chr2_3:3985640-3985659 Msa0272450:intron 35.0%
TTAATGTACAAGGCCAATAC+AGG - chr2_3:3985693-3985712 None:intergenic 35.0%
GCTGGTTAATAAGATAAAGG+GGG - chr2_3:3985897-3985916 None:intergenic 35.0%
TTAGATGAAGATACGTAAGC+TGG - chr2_3:3985915-3985934 None:intergenic 35.0%
CCAAAAACATCTCCATATAG+TGG - chr2_3:3985951-3985970 None:intergenic 35.0%
! CCACTATATGGAGATGTTTT+TGG + chr2_3:3985948-3985967 Msa0272450:CDS 35.0%
GTAATCAAGAAATAGCACTG+AGG - chr2_3:3986287-3986306 None:intergenic 35.0%
! TCTTGATTACTCTTTTGGTG+TGG + chr2_3:3986297-3986316 Msa0272450:intron 35.0%
ATAAAAGGACTGCCTCTTAT+GGG - chr2_3:3986352-3986371 None:intergenic 35.0%
AATAAAAGGACTGCCTCTTA+TGG - chr2_3:3986353-3986372 None:intergenic 35.0%
! ATAAGAGGCAGTCCTTTTAT+TGG + chr2_3:3986352-3986371 Msa0272450:intron 35.0%
!! CAGTGTTTAGTCTTATCAAC+TGG - chr2_3:3986514-3986533 None:intergenic 35.0%
!! CAGTTGATAAGACTAAACAC+TGG + chr2_3:3986512-3986531 Msa0272450:CDS 35.0%
! GTTGATAAGACTAAACACTG+GGG + chr2_3:3986514-3986533 Msa0272450:CDS 35.0%
!! AGTCTGTTGATAGTCTATCA+AGG + chr2_3:3986632-3986651 Msa0272450:CDS 35.0%
! TGTAATGTAGGTTTGAAGTG+TGG + chr2_3:3986690-3986709 Msa0272450:intron 35.0%
AAACTAGCAAAATCAAGGTG+AGG - chr2_3:3986757-3986776 None:intergenic 35.0%
AGATAGATGTGGTGCTTATT+AGG + chr2_3:3986994-3987013 Msa0272450:intron 35.0%
TGCTTATTAGGTTAGGTACT+TGG + chr2_3:3987006-3987025 Msa0272450:intron 35.0%
TTAGGGTCTGTTAGGTTTAA+TGG + chr2_3:3987073-3987092 Msa0272450:intron 35.0%
! TGTTAGGTTTAATGGATGAG+AGG + chr2_3:3987081-3987100 Msa0272450:intron 35.0%
! GTTAGGTTTAATGGATGAGA+GGG + chr2_3:3987082-3987101 Msa0272450:intron 35.0%
TGACAGTAAATAACTGTACG+GGG - chr2_3:3987368-3987387 None:intergenic 35.0%
CAAAATGACACAGGAAAAAG+AGG - chr2_3:3987409-3987428 None:intergenic 35.0%
TCAAGCACCTTCATAGATAA+CGG - chr2_3:3987600-3987619 None:intergenic 35.0%
AAATTTACATACGTGTGTCC+GGG - chr2_3:3987663-3987682 None:intergenic 35.0%
ATAACTACAGAGAGGAGAAA+AGG - chr2_3:3987764-3987783 None:intergenic 35.0%
AGGTCAAAAGTCAGATAAAG+TGG + chr2_3:3987941-3987960 Msa0272450:CDS 35.0%
AGAAAGATGCAAGAAAAGGA+CGG + chr2_3:3988294-3988313 Msa0272450:CDS 35.0%
CGAGGGTTTAAGAGAAATTG+AGG - chr2_3:3981240-3981259 None:intergenic 40.0%
AGGTTATGCGATAGTAACAG+AGG - chr2_3:3981345-3981364 None:intergenic 40.0%
! TTTTCAGAATGGATCTCCAC+AGG - chr2_3:3982139-3982158 None:intergenic 40.0%
ATTCCTACCTCAACAACATC+AGG - chr2_3:3982229-3982248 None:intergenic 40.0%
! CATAATGGCCTTGAAAGAAG+GGG - chr2_3:3982290-3982309 None:intergenic 40.0%
! GCATAATGGCCTTGAAAGAA+GGG - chr2_3:3982291-3982310 None:intergenic 40.0%
! TGCATAATGGCCTTGAAAGA+AGG - chr2_3:3982292-3982311 None:intergenic 40.0%
TGTATGTATGTGGTTCTTGC+AGG + chr2_3:3982575-3982594 Msa0272450:intron 40.0%
GTATGTATGTGGTTCTTGCA+GGG + chr2_3:3982576-3982595 Msa0272450:intron 40.0%
TATGTATGTGGTTCTTGCAG+GGG + chr2_3:3982577-3982596 Msa0272450:intron 40.0%
ACTGGTAGGTGTTTGGAAAT+GGG + chr2_3:3982627-3982646 Msa0272450:intron 40.0%
GATGGATGAAACAGTGGTTA+TGG + chr2_3:3982980-3982999 Msa0272450:intron 40.0%
! CATTCCCTTTTCCCACAATT+TGG - chr2_3:3983041-3983060 None:intergenic 40.0%
ATTGTGGGAAAAGGGAATGT+TGG + chr2_3:3983042-3983061 Msa0272450:intron 40.0%
GCGACTATGTTTAACTCACT+AGG - chr2_3:3983123-3983142 None:intergenic 40.0%
!!! CCACGTAGTTTTAGAAGTCA+GGG - chr2_3:3983150-3983169 None:intergenic 40.0%
!!! ACCACGTAGTTTTAGAAGTC+AGG - chr2_3:3983151-3983170 None:intergenic 40.0%
TTGTTTGAACAAACCTCGTG+AGG + chr2_3:3983171-3983190 Msa0272450:intron 40.0%
TGTTTGAACAAACCTCGTGA+GGG + chr2_3:3983172-3983191 Msa0272450:intron 40.0%
! GTGACCGTGAAAATGGATTT+AGG + chr2_3:3983265-3983284 Msa0272450:intron 40.0%
GATTCGTCATTGATAGAGAG+AGG + chr2_3:3983287-3983306 Msa0272450:intron 40.0%
TTAGGTTTACAAGCGGATCT+TGG + chr2_3:3983312-3983331 Msa0272450:intron 40.0%
ACCGAACCTGAAAATAAACG+AGG + chr2_3:3983359-3983378 Msa0272450:intron 40.0%
!!! TTCAGTTTTTTGTTGTGGGC+AGG + chr2_3:3983397-3983416 Msa0272450:intron 40.0%
GAGCATTAAGCACAATGGAA+AGG - chr2_3:3983523-3983542 None:intergenic 40.0%
TTCCATTGTGCTTAATGCTC+AGG + chr2_3:3983523-3983542 Msa0272450:intron 40.0%
!!! AGCTGTGTTATTGTTTTGGC+AGG + chr2_3:3983647-3983666 Msa0272450:intron 40.0%
!!! GCTGTGTTATTGTTTTGGCA+GGG + chr2_3:3983648-3983667 Msa0272450:intron 40.0%
!!! CTGTGTTATTGTTTTGGCAG+GGG + chr2_3:3983649-3983668 Msa0272450:intron 40.0%
GCAGTAGAATAAGCATCTGA+TGG - chr2_3:3983892-3983911 None:intergenic 40.0%
TAAATAGGTAGCTGGGAAGT+TGG + chr2_3:3983979-3983998 Msa0272450:intron 40.0%
AAATTCAACAGAGGGACACA+AGG - chr2_3:3984170-3984189 None:intergenic 40.0%
GCAGGCTTATATTGAGAAAG+AGG + chr2_3:3984316-3984335 Msa0272450:intron 40.0%
GGAACGTATGCAACCAAAAA+TGG + chr2_3:3984367-3984386 Msa0272450:CDS 40.0%
!! ATGTCAGCTTTGGCTTTGTT+TGG - chr2_3:3984568-3984587 None:intergenic 40.0%
! GTAGTGTTAGGCTAGTTCTT+AGG + chr2_3:3984724-3984743 Msa0272450:intron 40.0%
GTTCCACTCAAATCAATCGT+TGG - chr2_3:3984812-3984831 None:intergenic 40.0%
! TCTATGTTTTTCCCATCAGG+TGG - chr2_3:3985028-3985047 None:intergenic 40.0%
AGACACAAAATGGAGAAGGA+GGG - chr2_3:3985317-3985336 None:intergenic 40.0%
AAGACACAAAATGGAGAAGG+AGG - chr2_3:3985213-3985232 None:intergenic 40.0%
CAAGAGAGAGAGACACAAAA+TGG + chr2_3:3985307-3985326 Msa0272450:intron 40.0%
AGAGAGACACAAAATGGAGA+AGG + chr2_3:3985313-3985332 Msa0272450:intron 40.0%
GAGAAGGAGAGAATGAGATA+AGG + chr2_3:3985329-3985348 Msa0272450:intron 40.0%
CTAACGCTCAACTAGATCAA+TGG - chr2_3:3985428-3985447 None:intergenic 40.0%
TGAAAACTTGTGAATGTGCC+TGG - chr2_3:3985455-3985474 None:intergenic 40.0%
AAGTCGTGTGATAACATACC+AGG - chr2_3:3985579-3985598 None:intergenic 40.0%
! AGAAAGTATACTTCGTCGAC+AGG - chr2_3:3985847-3985866 None:intergenic 40.0%
ACAAGATCAGCCTAACTATG+AGG + chr2_3:3985977-3985996 Msa0272450:CDS 40.0%
!! TGATTACTCTTTTGGTGTGG+CGG + chr2_3:3986300-3986319 Msa0272450:intron 40.0%
CTCTTATGGGTGAAAAGAGA+AGG - chr2_3:3986339-3986358 None:intergenic 40.0%
! CTTCTCTTTTCACCCATAAG+AGG + chr2_3:3986337-3986356 Msa0272450:intron 40.0%
GAAGAGGAGGAATTTGAAGA+TGG + chr2_3:3986604-3986623 Msa0272450:CDS 40.0%
! ATGTAGGTTTGAAGTGTGGT+TGG + chr2_3:3986694-3986713 Msa0272450:intron 40.0%
! AGAACACCCACACTTTCTTT+TGG - chr2_3:3986728-3986747 None:intergenic 40.0%
GATGTGGTGCTTATTAGGTT+AGG + chr2_3:3986999-3987018 Msa0272450:intron 40.0%
AAACCTAACAGACCCTAAGT+GGG - chr2_3:3987071-3987090 None:intergenic 40.0%
TAAACCTAACAGACCCTAAG+TGG - chr2_3:3987072-3987091 None:intergenic 40.0%
! GTTTAATGGATGAGAGGGAA+GGG + chr2_3:3987087-3987106 Msa0272450:intron 40.0%
! TGAGAGGGAAGGGATTTTAA+TGG + chr2_3:3987097-3987116 Msa0272450:intron 40.0%
!! AGGGAAGGGATTTTAATGGA+AGG + chr2_3:3987101-3987120 Msa0272450:intron 40.0%
!! GGGAAGGGATTTTAATGGAA+GGG + chr2_3:3987102-3987121 Msa0272450:intron 40.0%
!! AAGGGATTTTAATGGAAGGG+AGG + chr2_3:3987105-3987124 Msa0272450:intron 40.0%
!! AGGGATTTTAATGGAAGGGA+GGG + chr2_3:3987106-3987125 Msa0272450:intron 40.0%
! ATACCGTGTTTGGTTCAACA+TGG + chr2_3:3987143-3987162 Msa0272450:intron 40.0%
! TACCGTGTTTGGTTCAACAT+GGG + chr2_3:3987144-3987163 Msa0272450:intron 40.0%
AAAAAAGTGGGGGACTTAGA+GGG - chr2_3:3987279-3987298 None:intergenic 40.0%
!!! TTTTTTTAGAGGGAAGGGGA+GGG - chr2_3:3987311-3987330 None:intergenic 40.0%
!!! TTTTTTTTAGAGGGAAGGGG+AGG - chr2_3:3987312-3987331 None:intergenic 40.0%
AGTAAATAACTGTACGGGGA+TGG - chr2_3:3987364-3987383 None:intergenic 40.0%
TGACACAGGAAAAAGAGGTA+AGG - chr2_3:3987404-3987423 None:intergenic 40.0%
CACCTGATGTTATTGACCTA+CGG + chr2_3:3987454-3987473 Msa0272450:CDS 40.0%
TTCCGTAGGTCAATAACATC+AGG - chr2_3:3987459-3987478 None:intergenic 40.0%
! TATTTCTCTGTTGCTTCCGT+AGG - chr2_3:3987473-3987492 None:intergenic 40.0%
ACGGAAGCAACAGAGAAATA+AGG + chr2_3:3987473-3987492 Msa0272450:CDS 40.0%
ACTTGATAAAGAGGCTTCTC+AGG - chr2_3:3987501-3987520 None:intergenic 40.0%
TTCTCCTCTCTGTAGTTATG+TGG + chr2_3:3987765-3987784 Msa0272450:intron 40.0%
TTTAGCACCCGATTTATCCT+GGG - chr2_3:3987803-3987822 None:intergenic 40.0%
! TTTTAGCACCCGATTTATCC+TGG - chr2_3:3987804-3987823 None:intergenic 40.0%
AGGATAAATCGGGTGCTAAA+AGG + chr2_3:3987803-3987822 Msa0272450:CDS 40.0%
GGATAAATCGGGTGCTAAAA+GGG + chr2_3:3987804-3987823 Msa0272450:CDS 40.0%
!! TTCCAGGTCGATTTGCTTAA+AGG + chr2_3:3987921-3987940 Msa0272450:intron 40.0%
TCTTACCTCTGGATTTATGC+AGG + chr2_3:3988084-3988103 Msa0272450:intron 40.0%
TCATACCTGCATAAATCCAG+AGG - chr2_3:3988092-3988111 None:intergenic 40.0%
TCTGGATTTATGCAGGTATG+AGG + chr2_3:3988091-3988110 Msa0272450:intron 40.0%
GCAGTCCCATATGATTAGTA+GGG - chr2_3:3988192-3988211 None:intergenic 40.0%
TGCAGTCCCATATGATTAGT+AGG - chr2_3:3988193-3988212 None:intergenic 40.0%
TTCTCTTAAACCCTCGACGA+TGG + chr2_3:3981244-3981263 Msa0272450:exon 45.0%
TTACCAAAACGGAGTCGTTG+CGG + chr2_3:3981283-3981302 Msa0272450:CDS 45.0%
CCTTCAAAGTCTACCTTCTC+TGG - chr2_3:3981765-3981784 None:intergenic 45.0%
CCAGAGAAGGTAGACTTTGA+AGG + chr2_3:3981762-3981781 Msa0272450:CDS 45.0%
! GAAGGTAGACTTTGAAGGCA+TGG + chr2_3:3981767-3981786 Msa0272450:CDS 45.0%
CTCAAGACCTGATGTTGTTG+AGG + chr2_3:3982219-3982238 Msa0272450:CDS 45.0%
AGACCTGATGTTGTTGAGGT+AGG + chr2_3:3982223-3982242 Msa0272450:intron 45.0%
TTGGGTATCCCCTTCTTTCA+AGG + chr2_3:3982279-3982298 Msa0272450:intron 45.0%
! CTTTTCTGTGACCAATGCCT+AGG - chr2_3:3982414-3982433 None:intergenic 45.0%
GACTGGTAGGTGTTTGGAAA+TGG + chr2_3:3982626-3982645 Msa0272450:intron 45.0%
TTTGGCGATGGATGAAACAG+TGG + chr2_3:3982974-3982993 Msa0272450:intron 45.0%
!! CCCTGACTTCTAAAACTACG+TGG + chr2_3:3983147-3983166 Msa0272450:intron 45.0%
AGCCTGAGCATTAAGCACAA+TGG - chr2_3:3983528-3983547 None:intergenic 45.0%
!! ATCTGAAGTGTTGTGCATGC+AGG + chr2_3:3984298-3984317 Msa0272450:intron 45.0%
TTCGTGATACAACTCCCCAA+GGG - chr2_3:3984591-3984610 None:intergenic 45.0%
TTTGTTTCCCACCACCTGAT+GGG + chr2_3:3985014-3985033 Msa0272450:intron 45.0%
! TGTTTTTCCCATCAGGTGGT+GGG - chr2_3:3985024-3985043 None:intergenic 45.0%
! ATGTTTTTCCCATCAGGTGG+TGG - chr2_3:3985025-3985044 None:intergenic 45.0%
GAGAAGAAGAGAATGGGAGA+AGG - chr2_3:3985190-3985209 None:intergenic 45.0%
AGGAGGGAGAAGAAGAGAAT+GGG - chr2_3:3985196-3985215 None:intergenic 45.0%
AAGGAGGGAGAAGAAGAGAA+TGG - chr2_3:3985197-3985216 None:intergenic 45.0%
GGAGAGAATGAGATAAGGAG+AGG + chr2_3:3985334-3985353 Msa0272450:intron 45.0%
TAGTTGAGCGTTAGTGATCC+AGG + chr2_3:3985434-3985453 Msa0272450:intron 45.0%
TTGGTGTGCAGGTAAAGTTG+AGG + chr2_3:3985544-3985563 Msa0272450:intron 45.0%
TGGTGTGCAGGTAAAGTTGA+GGG + chr2_3:3985545-3985564 Msa0272450:intron 45.0%
AAGTTGAGGGAGATGAAACC+TGG + chr2_3:3985558-3985577 Msa0272450:CDS 45.0%
CACGACTTGAAAGAAGCTCT+TGG + chr2_3:3985591-3985610 Msa0272450:CDS 45.0%
ATCTTCAGCTGAGGGTAAGA+TGG - chr2_3:3985754-3985773 None:intergenic 45.0%
ATAACCAAAGCTAGCTCCAG+CGG - chr2_3:3985800-3985819 None:intergenic 45.0%
!! GCTAGCTTTGGTTATCATCC+TGG + chr2_3:3985805-3985824 Msa0272450:CDS 45.0%
! AGCTTTGGTTATCATCCTGG+TGG + chr2_3:3985808-3985827 Msa0272450:CDS 45.0%
TTGGTTATCATCCTGGTGGA+TGG + chr2_3:3985812-3985831 Msa0272450:CDS 45.0%
! TGGTTATCATCCTGGTGGAT+GGG + chr2_3:3985813-3985832 Msa0272450:CDS 45.0%
AAGTATACTTCGTCGACAGG+AGG - chr2_3:3985844-3985863 None:intergenic 45.0%
GACTAAACACTGGGGTGATT+TGG + chr2_3:3986522-3986541 Msa0272450:CDS 45.0%
! TAAACACTGGGGTGATTTGG+AGG + chr2_3:3986525-3986544 Msa0272450:CDS 45.0%
GGAAGAAGAGGAAGAAGAAG+AGG + chr2_3:3986558-3986577 Msa0272450:CDS 45.0%
AGAAGAGGAAGAAGAAGAGG+AGG + chr2_3:3986561-3986580 Msa0272450:CDS 45.0%
GGAAGAAGAAGGAATGGAAG+AGG + chr2_3:3986588-3986607 Msa0272450:CDS 45.0%
AGAAGAAGGAATGGAAGAGG+AGG + chr2_3:3986591-3986610 Msa0272450:CDS 45.0%
! GGTACTGGGTTAGATAGATG+TGG + chr2_3:3986983-3987002 Msa0272450:intron 45.0%
! GGTTTAATGGATGAGAGGGA+AGG + chr2_3:3987086-3987105 Msa0272450:intron 45.0%
!! GGGATTTTAATGGAAGGGAG+GGG + chr2_3:3987107-3987126 Msa0272450:intron 45.0%
!! GGATTTTAATGGAAGGGAGG+GGG + chr2_3:3987108-3987127 Msa0272450:intron 45.0%
!! GATTTTAATGGAAGGGAGGG+GGG + chr2_3:3987109-3987128 Msa0272450:intron 45.0%
CTCCCATGTTGAACCAAACA+CGG - chr2_3:3987149-3987168 None:intergenic 45.0%
! GTGTTTGGTTCAACATGGGA+GGG + chr2_3:3987148-3987167 Msa0272450:intron 45.0%
! TGTTTGGTTCAACATGGGAG+GGG + chr2_3:3987149-3987168 Msa0272450:intron 45.0%
TCAACATGGGAGGGGTTTAA+TGG + chr2_3:3987157-3987176 Msa0272450:intron 45.0%
AAAAAGTGGGGGACTTAGAG+GGG - chr2_3:3987278-3987297 None:intergenic 45.0%
CAAAAAAGTGGGGGACTTAG+AGG - chr2_3:3987280-3987299 None:intergenic 45.0%
GCAAGAGAGCAAAAAAGTGG+GGG - chr2_3:3987289-3987308 None:intergenic 45.0%
GGCAAGAGAGCAAAAAAGTG+GGG - chr2_3:3987290-3987309 None:intergenic 45.0%
GGGCAAGAGAGCAAAAAAGT+GGG - chr2_3:3987291-3987310 None:intergenic 45.0%
AGGGCAAGAGAGCAAAAAAG+TGG - chr2_3:3987292-3987311 None:intergenic 45.0%
! AGTGCTGAGCAAAATGACAC+AGG - chr2_3:3987418-3987437 None:intergenic 45.0%
! ATTTTGCTCAGCACTCCTAC+TGG + chr2_3:3987423-3987442 Msa0272450:intron 45.0%
GCAGGATCTTTACTTGTACC+CGG + chr2_3:3987642-3987661 Msa0272450:CDS 45.0%
CCAACCACATAACTACAGAG+AGG - chr2_3:3987772-3987791 None:intergenic 45.0%
CCTCTCTGTAGTTATGTGGT+TGG + chr2_3:3987769-3987788 Msa0272450:intron 45.0%
TGTAGTTATGTGGTTGGCAC+TGG + chr2_3:3987775-3987794 Msa0272450:intron 45.0%
GACCTTTAAGCAAATCGACC+TGG - chr2_3:3987926-3987945 None:intergenic 45.0%
TATGCAGGTATGAGGAAGCT+AGG + chr2_3:3988099-3988118 Msa0272450:intron 45.0%
ATGCAGGTATGAGGAAGCTA+GGG + chr2_3:3988100-3988119 Msa0272450:intron 45.0%
GCGAGAAGATTTCAGTGACA+TGG + chr2_3:3988145-3988164 Msa0272450:CDS 45.0%
TTTCAGTGACATGGTTGCAG+AGG + chr2_3:3988154-3988173 Msa0272450:CDS 45.0%
TAGCTATAACTGTTTCGGGC+AGG + chr2_3:3988437-3988456 Msa0272450:three_prime_UTR 45.0%
!! AAAAAAAAAAAATCAATTAA+GGG - chr2_3:3981854-3981873 None:intergenic 5.0%
!! AAAAAAAAAAAAATCAATTA+AGG - chr2_3:3981855-3981874 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTATAGAA+TGG + chr2_3:3982923-3982942 Msa0272450:intron 5.0%
!!! TTATTTTACTTATATATTAT+TGG + chr2_3:3985492-3985511 Msa0272450:intron 5.0%
TTTCCTTGATGTGAAGGCGG+TGG + chr2_3:3981149-3981168 Msa0272450:five_prime_UTR 50.0%
AATCCACCGCCTTCACATCA+AGG - chr2_3:3981155-3981174 None:intergenic 50.0%
!! GCAACGACTCCGTTTTGGTA+AGG - chr2_3:3981284-3981303 None:intergenic 50.0%
GGAGAATACTGATCCGAAGC+AGG + chr2_3:3981304-3981323 Msa0272450:CDS 50.0%
TGATAAGAAGGATGAGGCGG+AGG + chr2_3:3981947-3981966 Msa0272450:CDS 50.0%
TGCAGCAGATCCTAAGTTGC+TGG + chr2_3:3982353-3982372 Msa0272450:CDS 50.0%
GGAACACTGTACCTGTACCT+AGG + chr2_3:3982394-3982413 Msa0272450:CDS 50.0%
CTGTACCTGTACCTAGGCAT+TGG + chr2_3:3982400-3982419 Msa0272450:CDS 50.0%
TGTGACCAATGCCTAGGTAC+AGG - chr2_3:3982408-3982427 None:intergenic 50.0%
!! ATCACCAATCCTGGACTGGT+AGG + chr2_3:3982613-3982632 Msa0272450:intron 50.0%
AACACCTACCAGTCCAGGAT+TGG - chr2_3:3982620-3982639 None:intergenic 50.0%
!! ATCCTGGACTGGTAGGTGTT+TGG + chr2_3:3982620-3982639 Msa0272450:intron 50.0%
TTCCAAACACCTACCAGTCC+AGG - chr2_3:3982625-3982644 None:intergenic 50.0%
TCGTGAGGGAGAAGTAGCTT+GGG + chr2_3:3983186-3983205 Msa0272450:intron 50.0%
ACAGACCGTGACCGTGAAAA+TGG + chr2_3:3983258-3983277 Msa0272450:intron 50.0%
TTGTTGTGGGCAGGCCTAAT+TGG + chr2_3:3983406-3983425 Msa0272450:intron 50.0%
TGTTGTGGGCAGGCCTAATT+GGG + chr2_3:3983407-3983426 Msa0272450:intron 50.0%
!!! TTGTTTTGGCAGGGGAAACG+AGG + chr2_3:3983657-3983676 Msa0272450:intron 50.0%
CCAGTGGCAGCAATGAAATC+AGG - chr2_3:3983708-3983727 None:intergenic 50.0%
CCTGATTTCATTGCTGCCAC+TGG + chr2_3:3983705-3983724 Msa0272450:CDS 50.0%
!!! TTTTGGGATGGATGGGTTGC+TGG + chr2_3:3984025-3984044 Msa0272450:intron 50.0%
AAGCCAAAGCTGACATCCCT+TGG + chr2_3:3984572-3984591 Msa0272450:CDS 50.0%
AGCCAAAGCTGACATCCCTT+GGG + chr2_3:3984573-3984592 Msa0272450:CDS 50.0%
CTTCGTGATACAACTCCCCA+AGG - chr2_3:3984592-3984611 None:intergenic 50.0%
CTTGGGGAGTTGTATCACGA+AGG + chr2_3:3984590-3984609 Msa0272450:CDS 50.0%
!! GGCCCAACGATTGATTTGAG+TGG + chr2_3:3984806-3984825 Msa0272450:intron 50.0%
GTTTGTTTCCCACCACCTGA+TGG + chr2_3:3985013-3985032 Msa0272450:intron 50.0%
GAAGAGAATGGGAGAAGGAG+AGG - chr2_3:3985185-3985204 None:intergenic 50.0%
CTTTCGTCAAAAGAGGGGCT+TGG - chr2_3:3985362-3985381 None:intergenic 50.0%
! GATGACATTGGTTGGTGTGC+AGG + chr2_3:3985533-3985552 Msa0272450:intron 50.0%
AGAAGCTCTTGGTATGCCTG+AGG + chr2_3:3985602-3985621 Msa0272450:CDS 50.0%
GAAGCTCTTGGTATGCCTGA+GGG + chr2_3:3985603-3985622 Msa0272450:CDS 50.0%
TGGTGGAGGACCATATCTCT+GGG - chr2_3:3985734-3985753 None:intergenic 50.0%
! ATGGTGGAGGACCATATCTC+TGG - chr2_3:3985735-3985754 None:intergenic 50.0%
TTCAGCTGAGGGTAAGATGG+TGG - chr2_3:3985751-3985770 None:intergenic 50.0%
!! GTATGGGAGCATTCAGTCCT+GGG - chr2_3:3985777-3985796 None:intergenic 50.0%
TAACCAAAGCTAGCTCCAGC+GGG - chr2_3:3985799-3985818 None:intergenic 50.0%
! GGTTATCATCCTGGTGGATG+GGG + chr2_3:3985814-3985833 Msa0272450:CDS 50.0%
CAGTATGGACGCCCACTATA+TGG + chr2_3:3985936-3985955 Msa0272450:intron 50.0%
TGCTGGTGTCCTCATTATGC+AGG + chr2_3:3986483-3986502 Msa0272450:intron 50.0%
! CTGGCTCTTCCTGCATAATG+AGG - chr2_3:3986495-3986514 None:intergenic 50.0%
AGAGGAAGAAGAAGAGGAGG+AGG + chr2_3:3986564-3986583 Msa0272450:CDS 50.0%
GGAGGAGGAAGAAGAAGGAA+TGG + chr2_3:3986582-3986601 Msa0272450:CDS 50.0%
TGGATATGCAGGTCCCACTT+AGG + chr2_3:3987055-3987074 Msa0272450:intron 50.0%
GGATATGCAGGTCCCACTTA+GGG + chr2_3:3987056-3987075 Msa0272450:intron 50.0%
! CGTGTTTGGTTCAACATGGG+AGG + chr2_3:3987147-3987166 Msa0272450:intron 50.0%
CACTGGCACCCAGGATAAAT+CGG + chr2_3:3987792-3987811 Msa0272450:CDS 50.0%
ACTGGCACCCAGGATAAATC+GGG + chr2_3:3987793-3987812 Msa0272450:CDS 50.0%
! AGTGGACGTCACTTTACTGC+CGG + chr2_3:3987959-3987978 Msa0272450:CDS 50.0%
CACTTTACTGCCGGAAGAGT+TGG + chr2_3:3987968-3987987 Msa0272450:CDS 50.0%
TCCATGGCTTCCAACTCTTC+CGG - chr2_3:3987981-3988000 None:intergenic 50.0%
! GGCAGGCAGAACATTTTCCA+TGG - chr2_3:3987997-3988016 None:intergenic 50.0%
TAAACCCTCGACGATGGCTG+CGG + chr2_3:3981250-3981269 Msa0272450:exon 55.0%
! TCTCCGCAACGACTCCGTTT+TGG - chr2_3:3981289-3981308 None:intergenic 55.0%
ATGTGGTTCTTGCAGGGGAG+CGG + chr2_3:3982582-3982601 Msa0272450:intron 55.0%
GCTGTGGCAATCACCAATCC+TGG + chr2_3:3982604-3982623 Msa0272450:CDS 55.0%
GGCAATCACCAATCCTGGAC+TGG + chr2_3:3982609-3982628 Msa0272450:CDS 55.0%
CAAGCTACTTCTCCCTCACG+AGG - chr2_3:3983187-3983206 None:intergenic 55.0%
CTCGTGAGGGAGAAGTAGCT+TGG + chr2_3:3983185-3983204 Msa0272450:intron 55.0%
GTTGTGGGCAGGCCTAATTG+GGG + chr2_3:3983408-3983427 Msa0272450:intron 55.0%
GCCAAAGCTGACATCCCTTG+GGG + chr2_3:3984574-3984593 Msa0272450:CDS 55.0%
TCCCCAAGGGATGTCAGCTT+TGG - chr2_3:3984578-3984597 None:intergenic 55.0%
GGTGGAGGACCATATCTCTG+GGG - chr2_3:3985733-3985752 None:intergenic 55.0%
! AGCTGAGGGTAAGATGGTGG+AGG - chr2_3:3985748-3985767 None:intergenic 55.0%
TACCCTCAGCTGAAGATCCC+AGG + chr2_3:3985757-3985776 Msa0272450:CDS 55.0%
GTCCTGGGATCTTCAGCTGA+GGG - chr2_3:3985762-3985781 None:intergenic 55.0%
AGTCCTGGGATCTTCAGCTG+AGG - chr2_3:3985763-3985782 None:intergenic 55.0%
!! GGTATGGGAGCATTCAGTCC+TGG - chr2_3:3985778-3985797 None:intergenic 55.0%
AAGCTAGCTCCAGCGGGTAT+GGG - chr2_3:3985793-3985812 None:intergenic 55.0%
AAAGCTAGCTCCAGCGGGTA+TGG - chr2_3:3985794-3985813 None:intergenic 55.0%
! ATACCCGCTGGAGCTAGCTT+TGG + chr2_3:3985793-3985812 Msa0272450:CDS 55.0%
! ACACTGGGGTGATTTGGAGG+AGG + chr2_3:3986528-3986547 Msa0272450:CDS 55.0%
! TGATTTGGAGGAGGAGGAGG+AGG + chr2_3:3986537-3986556 Msa0272450:CDS 55.0%
GGAAGAAGAAGAGGAGGAGG+AGG + chr2_3:3986567-3986586 Msa0272450:CDS 55.0%
GAGGAGGAGGAGGAAGAAGA+AGG + chr2_3:3986547-3986566 Msa0272450:CDS 55.0%
GGTCCCACTTAGGGTCTGTT+AGG + chr2_3:3987065-3987084 Msa0272450:intron 55.0%
TCAGGTGTCTCCACTCCAGT+AGG - chr2_3:3987441-3987460 None:intergenic 55.0%
CAGGTATGAGGAAGCTAGGG+AGG + chr2_3:3988103-3988122 Msa0272450:intron 55.0%
GGACGGCAAGTCGAAGAAGA+AGG + chr2_3:3988311-3988330 Msa0272450:CDS 55.0%
GTTACCGCAGCCATCGTCGA+GGG - chr2_3:3981257-3981276 None:intergenic 60.0%
TGTTACCGCAGCCATCGTCG+AGG - chr2_3:3981258-3981277 None:intergenic 60.0%
CGCGAGATTTGCGACTCCTG+AGG + chr2_3:3983234-3983253 Msa0272450:intron 60.0%
ACGGTCACGGTCTGTTCCTC+AGG - chr2_3:3983253-3983272 None:intergenic 60.0%
CTGAATGCTCCCATACCCGC+TGG + chr2_3:3985781-3985800 Msa0272450:CDS 60.0%
! CTGGGGTGATTTGGAGGAGG+AGG + chr2_3:3986531-3986550 Msa0272450:CDS 60.0%
! GGGTGATTTGGAGGAGGAGG+AGG + chr2_3:3986534-3986553 Msa0272450:CDS 60.0%
GGAGGAGGAGGAGGAAGAAG+AGG + chr2_3:3986546-3986565 Msa0272450:CDS 60.0%
GCTCAGCACTCCTACTGGAG+TGG + chr2_3:3987428-3987447 Msa0272450:intron 60.0%
GCCGGAAGAGTTGGAAGCCA+TGG + chr2_3:3987977-3987996 Msa0272450:CDS 60.0%
TTCTTGCAGGGGAGCGGCTG+TGG + chr2_3:3982588-3982607 Msa0272450:intron 65.0%
!! CATGGAGGAGGAGCACCCTC+AGG - chr2_3:3985621-3985640 None:intergenic 65.0%
!! CTGAGGGTGCTCCTCCTCCA+TGG + chr2_3:3985619-3985638 Msa0272450:CDS 65.0%
!! TGTGGTTGGCACTGGCACCC+AGG + chr2_3:3987783-3987802 Msa0272450:CDS 65.0%
GGAGGCTTGCCCCATCCACC+AGG - chr2_3:3985826-3985845 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 3981148 3988465 3981148 ID=Msa0272450;Name=Msa0272450
chr2_3 mRNA 3981148 3988465 3981148 ID=Msa0272450-mRNA-1;Parent=Msa0272450;Name=Msa0272450-mRNA-1;_AED=0.16;_eAED=0.16;_QI=115|0.94|0.94|1|1|1|19|118|531
chr2_3 exon 3981148 3981325 3981148 ID=Msa0272450-mRNA-1:exon:1957;Parent=Msa0272450-mRNA-1
chr2_3 exon 3981732 3981839 3981732 ID=Msa0272450-mRNA-1:exon:1958;Parent=Msa0272450-mRNA-1
chr2_3 exon 3981942 3982073 3981942 ID=Msa0272450-mRNA-1:exon:1959;Parent=Msa0272450-mRNA-1
chr2_3 exon 3982178 3982240 3982178 ID=Msa0272450-mRNA-1:exon:1960;Parent=Msa0272450-mRNA-1
chr2_3 exon 3982339 3982421 3982339 ID=Msa0272450-mRNA-1:exon:1961;Parent=Msa0272450-mRNA-1
chr2_3 exon 3982597 3982630 3982597 ID=Msa0272450-mRNA-1:exon:1962;Parent=Msa0272450-mRNA-1
chr2_3 exon 3983669 3983746 3983669 ID=Msa0272450-mRNA-1:exon:1963;Parent=Msa0272450-mRNA-1
chr2_3 exon 3984320 3984412 3984320 ID=Msa0272450-mRNA-1:exon:1964;Parent=Msa0272450-mRNA-1
chr2_3 exon 3984539 3984625 3984539 ID=Msa0272450-mRNA-1:exon:1965;Parent=Msa0272450-mRNA-1
chr2_3 exon 3985555 3985656 3985555 ID=Msa0272450-mRNA-1:exon:1966;Parent=Msa0272450-mRNA-1
chr2_3 exon 3985736 3985855 3985736 ID=Msa0272450-mRNA-1:exon:1967;Parent=Msa0272450-mRNA-1
chr2_3 exon 3985939 3985998 3985939 ID=Msa0272450-mRNA-1:exon:1968;Parent=Msa0272450-mRNA-1
chr2_3 exon 3986505 3986653 3986505 ID=Msa0272450-mRNA-1:exon:1969;Parent=Msa0272450-mRNA-1
chr2_3 exon 3987434 3987518 3987434 ID=Msa0272450-mRNA-1:exon:1970;Parent=Msa0272450-mRNA-1
chr2_3 exon 3987612 3987670 3987612 ID=Msa0272450-mRNA-1:exon:1971;Parent=Msa0272450-mRNA-1
chr2_3 exon 3987780 3987825 3987780 ID=Msa0272450-mRNA-1:exon:1972;Parent=Msa0272450-mRNA-1
chr2_3 exon 3987927 3988018 3987927 ID=Msa0272450-mRNA-1:exon:1973;Parent=Msa0272450-mRNA-1
chr2_3 exon 3988106 3988175 3988106 ID=Msa0272450-mRNA-1:exon:1974;Parent=Msa0272450-mRNA-1
chr2_3 exon 3988276 3988465 3988276 ID=Msa0272450-mRNA-1:exon:1975;Parent=Msa0272450-mRNA-1
chr2_3 five_prime_UTR 3981148 3981262 3981148 ID=Msa0272450-mRNA-1:five_prime_utr;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3981263 3981325 3981263 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3981732 3981839 3981732 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3981942 3982073 3981942 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3982178 3982240 3982178 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3982339 3982421 3982339 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3982597 3982630 3982597 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3983669 3983746 3983669 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3984320 3984412 3984320 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3984539 3984625 3984539 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3985555 3985656 3985555 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3985736 3985855 3985736 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3985939 3985998 3985939 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3986505 3986653 3986505 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3987434 3987518 3987434 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3987612 3987670 3987612 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3987780 3987825 3987780 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3987927 3988018 3987927 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3988106 3988175 3988106 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 CDS 3988276 3988347 3988276 ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1
chr2_3 three_prime_UTR 3988348 3988465 3988348 ID=Msa0272450-mRNA-1:three_prime_utr;Parent=Msa0272450-mRNA-1
Gene Sequence

>Msa0272450

ATGGCTGCGGTAACACTTCCTTACCAAAACGGAGTCGTTGCGGAGAATACTGATCCGAAGCAGGTTTTTGAACAAGTTGAAATTGAGTATGTACCAGAGAAGGTAGACTTTGAAGGCATGGATGAAGAATTTAGAAAAATATTTGAGAAATTTAGTTTCACTGCTTCAGAGGAAATTGATAAGAAGGATGAGGCGGAGGAAACTGCAGCAACTAAAAAGAAAGCTAATTCTGATTCTGATTCTGATCATGAAGAAAATGATAACGAGCAAAAAGAAAAAGGCGTATCAAACAAGAAGAAAAAGCTTCAACGAAGAATGAAAATTGCTGAACTGAAACAAGTTAGCTCAAGACCTGATGTTGTTGAGGTTTGGGATGCTACTGCAGCAGATCCTAAGTTGCTGGTGTTTTTGAAATCTTATCGGAACACTGTACCTGTACCTAGGCATTGGGGAGCGGCTGTGGCAATCACCAATCCTGGACTGGGGAAACGAGGTATTGAGAAACAACCCTTTCAACTTCCTGATTTCATTGCTGCCACTGGTATTGAGAAAATCAGACAGGCTTATATTGAGAAAGAGGACAGTAAGAAGTTGAAACAAAAGCAAAGGGAACGTATGCAACCAAAAATGGGAAAAATGGATATAGATTATCAGGTCCTTCATGATGCATTTTTTAAGTACCAAACAAAGCCAAAGCTGACATCCCTTGGGGAGTTGTATCACGAAGGAAAAGAATTTGAGGTAAAGTTGAGGGAGATGAAACCTGGTATGTTATCACACGACTTGAAAGAAGCTCTTGGTATGCCTGAGGGTGCTCCTCCTCCATGGCTTATTAATATGCAGAGATATGGTCCTCCACCATCTTACCCTCAGCTGAAGATCCCAGGACTGAATGCTCCCATACCCGCTGGAGCTAGCTTTGGTTATCATCCTGGTGGATGGGGCAAGCCTCCTGTCGACGAATATGGACGCCCACTATATGGAGATGTTTTTGGTGTTCAACAAGATCAGCCTAACTATGAGGAAGAGCCAGTTGATAAGACTAAACACTGGGGTGATTTGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAGGAATGGAAGAGGAGGAATTTGAAGATGGTGTTCAGTCTGTTGATAGTCTATCAAGCACTCCTACTGGAGTGGAGACACCTGATGTTATTGACCTACGGAAGCAACAGAGAAATAAGGAGCCTGAGAAGCCTCTTTATCAAGTGCTTGAAGAGAAAGAAGAAAAAATTGGTGCAGGATCTTTACTTGTACCCGGACACACTTATGTGGTTGGCACTGGCACCCAGGATAAATCGGGTGCTAAAAGGGTCGATTTGCTTAAAGGTCAAAAGTCAGATAAAGTGGACGTCACTTTACTGCCGGAAGAGTTGGAAGCCATGGAAAATGTTCTGCCTGCCAAGTATGAGGAAGCTAGGGAGGAAGAGAAGTTGCGTAGTCAGCGAGAAGATTTCAGTGACATGGTTGCAGAGAATGAGAAGAAAAGAAAAAGAAAGATGCAAGAAAAGGACGGCAAGTCGAAGAAGAAGGACTTTAAGTTTTAG

Protein sequence

>Msa0272450

MAAVTLPYQNGVVAENTDPKQVFEQVEIEYVPEKVDFEGMDEEFRKIFEKFSFTASEEIDKKDEAEETAATKKKANSDSDSDHEENDNEQKEKGVSNKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWGAAVAITNPGLGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHDLKEALGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPAGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQDQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEGMEEEEFEDGVQSVDSLSSTPTGVETPDVIDLRKQQRNKEPEKPLYQVLEEKEEKIGAGSLLVPGHTYVVGTGTQDKSGAKRVDLLKGQKSDKVDVTLLPEELEAMENVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF*