Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272450 | XP_003593554.1 | 87.567 | 563 | 23 | 7 | 1 | 519 | 1 | 560 | 0.0 | 886 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272450 | sp|Q13435|SF3B2_HUMAN | 50.277 | 541 | 222 | 15 | 26 | 531 | 367 | 895 | 5.78e-129 | 400 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272450 | G7IPR0 | 87.567 | 563 | 23 | 7 | 1 | 519 | 1 | 560 | 0.0 | 886 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006040 | Msa0272450 | 0.839051 | 1.995998e-57 | -8.615850e-47 |
Msa0007440 | Msa0272450 | 0.840584 | 7.961895e-58 | -8.615850e-47 |
Msa0010490 | Msa0272450 | 0.826553 | 2.546989e-54 | -8.615850e-47 |
Msa0010500 | Msa0272450 | 0.821778 | 3.368791e-53 | -8.615850e-47 |
Msa0015480 | Msa0272450 | 0.800706 | 1.271010e-48 | -8.615850e-47 |
Msa0028660 | Msa0272450 | 0.807807 | 4.220967e-50 | -8.615850e-47 |
Msa0032470 | Msa0272450 | 0.807032 | 6.160812e-50 | -8.615850e-47 |
Msa0037540 | Msa0272450 | -0.823982 | 1.032918e-53 | -8.615850e-47 |
Msa0037590 | Msa0272450 | -0.821030 | 5.014309e-53 | -8.615850e-47 |
Msa0037840 | Msa0272450 | 0.816788 | 4.616481e-52 | -8.615850e-47 |
Msa0043980 | Msa0272450 | 0.804141 | 2.491294e-49 | -8.615850e-47 |
Msa0046450 | Msa0272450 | 0.841421 | 4.802385e-58 | -8.615850e-47 |
Msa0052860 | Msa0272450 | 0.808692 | 2.734006e-50 | -8.615850e-47 |
Msa0054750 | Msa0272450 | 0.861353 | 1.089275e-63 | -8.615850e-47 |
Msa0056030 | Msa0272450 | 0.876416 | 1.421198e-68 | -8.615850e-47 |
Msa0062490 | Msa0272450 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
Msa0076320 | Msa0272450 | 0.801141 | 1.035589e-48 | -8.615850e-47 |
Msa0082680 | Msa0272450 | -0.828273 | 9.852749e-55 | -8.615850e-47 |
Msa0083280 | Msa0272450 | 0.807643 | 4.572440e-50 | -8.615850e-47 |
Msa0086420 | Msa0272450 | 0.836303 | 1.012554e-56 | -8.615850e-47 |
Msa0090210 | Msa0272450 | 0.826778 | 2.250561e-54 | -8.615850e-47 |
Msa0096030 | Msa0272450 | 0.815340 | 9.721948e-52 | -8.615850e-47 |
Msa0098340 | Msa0272450 | 0.800961 | 1.127016e-48 | -8.615850e-47 |
Msa0109590 | Msa0272450 | 0.819625 | 1.052597e-52 | -8.615850e-47 |
Msa0118540 | Msa0272450 | 0.810984 | 8.780545e-51 | -8.615850e-47 |
Msa0125640 | Msa0272450 | -0.805942 | 1.046415e-49 | -8.615850e-47 |
Msa0129190 | Msa0272450 | -0.816904 | 4.347917e-52 | -8.615850e-47 |
Msa0137710 | Msa0272450 | -0.820424 | 6.909544e-53 | -8.615850e-47 |
Msa0137730 | Msa0272450 | 0.864951 | 8.400871e-65 | -8.615850e-47 |
Msa0138020 | Msa0272450 | 0.808296 | 3.321498e-50 | -8.615850e-47 |
Msa0175540 | Msa0272450 | 0.819613 | 1.059590e-52 | -8.615850e-47 |
Msa0178800 | Msa0272450 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
Msa0189520 | Msa0272450 | 0.818029 | 2.425371e-52 | -8.615850e-47 |
Msa0217680 | Msa0272450 | 0.837541 | 4.890188e-57 | -8.615850e-47 |
Msa0224030 | Msa0272450 | 0.807667 | 4.519244e-50 | -8.615850e-47 |
Msa0231690 | Msa0272450 | 0.808109 | 3.639565e-50 | -8.615850e-47 |
Msa0241390 | Msa0272450 | 0.807301 | 5.403507e-50 | -8.615850e-47 |
Msa0256330 | Msa0272450 | 0.810016 | 1.421041e-50 | -8.615850e-47 |
Msa0257500 | Msa0272450 | 0.844675 | 6.527488e-59 | -8.615850e-47 |
Msa0272450 | Msa0279220 | 0.800502 | 1.398562e-48 | -8.615850e-47 |
Msa0272450 | Msa0279240 | 0.824637 | 7.245177e-54 | -8.615850e-47 |
Msa0272450 | Msa0281480 | 0.808820 | 2.566130e-50 | -8.615850e-47 |
Msa0272450 | Msa0295330 | 0.810360 | 1.198377e-50 | -8.615850e-47 |
Msa0272450 | Msa0297810 | -0.809772 | 1.604298e-50 | -8.615850e-47 |
Msa0272450 | Msa0305410 | 0.800389 | 1.474940e-48 | -8.615850e-47 |
Msa0272450 | Msa0307560 | 0.802746 | 4.847627e-49 | -8.615850e-47 |
Msa0272450 | Msa0312670 | 0.833681 | 4.637395e-56 | -8.615850e-47 |
Msa0272450 | Msa0318980 | 0.811670 | 6.233879e-51 | -8.615850e-47 |
Msa0272450 | Msa0320610 | 0.818735 | 1.678351e-52 | -8.615850e-47 |
Msa0272450 | Msa0335820 | -0.820389 | 7.039447e-53 | -8.615850e-47 |
Msa0272450 | Msa0347610 | 0.813740 | 2.196277e-51 | -8.615850e-47 |
Msa0272450 | Msa0358860 | 0.805112 | 1.562431e-49 | -8.615850e-47 |
Msa0272450 | Msa0376910 | 0.824241 | 8.978400e-54 | -8.615850e-47 |
Msa0272450 | Msa0383800 | 0.827145 | 1.839264e-54 | -8.615850e-47 |
Msa0272450 | Msa0385490 | 0.852076 | 5.853735e-61 | -8.615850e-47 |
Msa0272450 | Msa0389610 | -0.810044 | 1.401959e-50 | -8.615850e-47 |
Msa0272450 | Msa0394340 | 0.833509 | 5.121006e-56 | -8.615850e-47 |
Msa0272450 | Msa0412840 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
Msa0272450 | Msa0419520 | 0.809127 | 2.206444e-50 | -8.615850e-47 |
Msa0272450 | Msa0434180 | 0.817898 | 2.597010e-52 | -8.615850e-47 |
Msa0272450 | Msa0442200 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
Msa0272450 | Msa0442610 | 0.834730 | 2.530810e-56 | -8.615850e-47 |
Msa0272450 | Msa0457510 | 0.830422 | 2.963828e-55 | -8.615850e-47 |
Msa0272450 | Msa0465550 | 0.818713 | 1.698357e-52 | -8.615850e-47 |
Msa0272450 | Msa0472960 | -0.822029 | 2.947835e-53 | -8.615850e-47 |
Msa0272450 | Msa0477080 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
Msa0272450 | Msa0481030 | 0.816680 | 4.881706e-52 | -8.615850e-47 |
Msa0272450 | Msa0482130 | 0.808274 | 3.357164e-50 | -8.615850e-47 |
Msa0272450 | Msa0489610 | 0.834269 | 3.304064e-56 | -8.615850e-47 |
Msa0272450 | Msa0544840 | 0.813757 | 2.178118e-51 | -8.615850e-47 |
Msa0272450 | Msa0555200 | 0.838460 | 2.839148e-57 | -8.615850e-47 |
Msa0272450 | Msa0608710 | 0.860373 | 2.161496e-63 | -8.615850e-47 |
Msa0272450 | Msa0610130 | 0.821330 | 4.275527e-53 | -8.615850e-47 |
Msa0272450 | Msa0631350 | 0.801043 | 1.084425e-48 | -8.615850e-47 |
Msa0272450 | Msa0647500 | 0.809541 | 1.798667e-50 | -8.615850e-47 |
Msa0272450 | Msa0649350 | 0.818949 | 1.501056e-52 | -8.615850e-47 |
Msa0272450 | Msa0661210 | 0.837730 | 4.373791e-57 | -8.615850e-47 |
Msa0272450 | Msa0666270 | 0.803559 | 3.290773e-49 | -8.615850e-47 |
Msa0272450 | Msa0694840 | 0.805996 | 1.019330e-49 | -8.615850e-47 |
Msa0272450 | Msa0703910 | 0.810508 | 1.113427e-50 | -8.615850e-47 |
Msa0272450 | Msa0711100 | 0.829529 | 4.892518e-55 | -8.615850e-47 |
Msa0272450 | Msa0741440 | 0.802832 | 4.652543e-49 | -8.615850e-47 |
Msa0272450 | Msa0742750 | 0.844609 | 6.798038e-59 | -8.615850e-47 |
Msa0272450 | Msa0748170 | 0.805898 | 1.068709e-49 | -8.615850e-47 |
Msa0272450 | Msa0750850 | 0.815040 | 1.133293e-51 | -8.615850e-47 |
Msa0272450 | Msa0751850 | 0.802079 | 6.651129e-49 | -8.615850e-47 |
Msa0272450 | Msa0772480 | 0.801090 | 1.060908e-48 | -8.615850e-47 |
Msa0272450 | Msa0797970 | 0.810634 | 1.045397e-50 | -8.615850e-47 |
Msa0272450 | Msa0798440 | 0.805943 | 1.045663e-49 | -8.615850e-47 |
Msa0272450 | Msa0819060 | 0.814165 | 1.769820e-51 | -8.615850e-47 |
Msa0272450 | Msa0827280 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
Msa0272450 | Msa0827350 | -0.808063 | 3.723673e-50 | -8.615850e-47 |
Msa0272450 | Msa0830540 | 0.823822 | 1.126081e-53 | -8.615850e-47 |
Msa0272450 | Msa0832150 | 0.838946 | 2.125417e-57 | -8.615850e-47 |
Msa0272450 | Msa0833460 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
Msa0272450 | Msa0835700 | 0.803148 | 4.002972e-49 | -8.615850e-47 |
Msa0272450 | Msa0861470 | 0.801858 | 7.382243e-49 | -8.615850e-47 |
Msa0272450 | Msa0861570 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
Msa0272450 | Msa0946280 | -0.808220 | 3.446991e-50 | -8.615850e-47 |
Msa0272450 | Msa0981840 | 0.958230 | 3.935771e-116 | -8.615850e-47 |
Msa0272450 | Msa0994390 | 0.802758 | 4.819846e-49 | -8.615850e-47 |
Msa0272450 | Msa1016910 | 0.847780 | 9.314805e-60 | -8.615850e-47 |
Msa0272450 | Msa1040800 | 0.807610 | 4.646239e-50 | -8.615850e-47 |
Msa0272450 | Msa1055680 | 0.831147 | 1.968120e-55 | -8.615850e-47 |
Msa0272450 | Msa1058170 | 0.851298 | 9.718817e-61 | -8.615850e-47 |
Msa0272450 | Msa1071320 | 0.808273 | 3.358664e-50 | -8.615850e-47 |
Msa0272450 | Msa1081790 | -0.835182 | 1.946874e-56 | -8.615850e-47 |
Msa0272450 | Msa1089320 | 0.834476 | 2.932304e-56 | -8.615850e-47 |
Msa0272450 | Msa1096950 | 0.800100 | 1.688353e-48 | -8.615850e-47 |
Msa0272450 | Msa1102790 | 0.836535 | 8.840004e-57 | -8.615850e-47 |
Msa0272450 | Msa1123710 | -0.809440 | 1.889936e-50 | -8.615850e-47 |
Msa0272450 | Msa1133230 | 0.834927 | 2.258387e-56 | -8.615850e-47 |
Msa0272450 | Msa1133250 | 0.820705 | 5.956093e-53 | -8.615850e-47 |
Msa0272450 | Msa1140230 | 0.826207 | 3.078600e-54 | -8.615850e-47 |
Msa0272450 | Msa1166090 | -0.836148 | 1.108624e-56 | -8.615850e-47 |
Msa0272450 | Msa1169850 | -0.812636 | 3.838047e-51 | -8.615850e-47 |
Msa0272450 | Msa1176720 | 0.844736 | 6.284286e-59 | -8.615850e-47 |
Msa0272450 | Msa1181250 | 0.825100 | 5.635983e-54 | -8.615850e-47 |
Msa0272450 | Msa1181330 | 0.822270 | 2.591611e-53 | -8.615850e-47 |
Msa0272450 | Msa1203880 | 0.804188 | 2.434809e-49 | -8.615850e-47 |
Msa0272450 | Msa1206360 | 0.807900 | 4.032164e-50 | -8.615850e-47 |
Msa0272450 | Msa1207310 | 0.828306 | 9.675223e-55 | -8.615850e-47 |
Msa0272450 | Msa1208380 | 0.831119 | 1.999208e-55 | -8.615850e-47 |
Msa0272450 | Msa1209260 | 0.801536 | 8.597930e-49 | -8.615850e-47 |
Msa0272450 | Msa1209760 | 0.805447 | 1.329388e-49 | -8.615850e-47 |
Msa0272450 | Msa1217470 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
Msa0272450 | Msa1231840 | 0.836800 | 7.569056e-57 | -8.615850e-47 |
Msa0272450 | Msa1244720 | -0.804099 | 2.541395e-49 | -8.615850e-47 |
Msa0272450 | Msa1270660 | 0.806115 | 9.620468e-50 | -8.615850e-47 |
Msa0272450 | Msa1305660 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
Msa0272450 | Msa1316360 | 0.816811 | 4.562437e-52 | -8.615850e-47 |
Msa0272450 | Msa1331320 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
Msa0272450 | Msa1331350 | 0.826948 | 2.049581e-54 | -8.615850e-47 |
Msa0272450 | Msa1342100 | 0.809495 | 1.839573e-50 | -8.615850e-47 |
Msa0272450 | Msa1346840 | 0.822830 | 1.920547e-53 | -8.615850e-47 |
Msa0272450 | Msa1355890 | 0.817523 | 3.154777e-52 | -8.615850e-47 |
Msa0272450 | Msa1358610 | -0.803994 | 2.671851e-49 | -8.615850e-47 |
Msa0272450 | Msa1359630 | 0.832009 | 1.207284e-55 | -8.615850e-47 |
Msa0272450 | Msa1364210 | 0.836284 | 1.023814e-56 | -8.615850e-47 |
Msa0272450 | Msa1371090 | 0.808229 | 3.432112e-50 | -8.615850e-47 |
Msa0272450 | Msa1386050 | 0.978830 | 1.184539e-146 | -8.615850e-47 |
Msa0272450 | Msa1388860 | 0.885043 | 1.142118e-71 | -8.615850e-47 |
Msa0272450 | Msa1396400 | -0.836846 | 7.364650e-57 | -8.615850e-47 |
Msa0272450 | Msa1397120 | 0.803601 | 3.224995e-49 | -8.615850e-47 |
Msa0272450 | Msa1401990 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
Msa0272450 | Msa1403340 | 0.827415 | 1.584129e-54 | -8.615850e-47 |
Msa0272450 | Msa1406110 | -0.815758 | 7.846239e-52 | -8.615850e-47 |
Msa0272450 | Msa1407470 | 0.802329 | 5.906379e-49 | -8.615850e-47 |
Msa0272450 | Msa1421060 | 0.801097 | 1.057453e-48 | -8.615850e-47 |
Msa0272450 | Msa1436520 | 0.833776 | 4.392063e-56 | -8.615850e-47 |
Msa0272450 | Msa1437910 | 0.812529 | 4.049782e-51 | -8.615850e-47 |
Msa0272450 | Msa1444740 | 0.857039 | 2.140998e-62 | -8.615850e-47 |
Msa0272450 | Msa1462840 | 0.801472 | 8.861024e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272450 | MtrunA17_Chr2g0282041 | 87.567 | 563 | 23 | 7 | 1 | 519 | 1 | 560 | 0.0 | 886 |
Msa0272450 | MtrunA17_Chr4g0047751 | 86.051 | 509 | 59 | 7 | 28 | 531 | 78 | 579 | 0.0 | 794 |
Msa0272450 | MtrunA17_Chr2g0313531 | 58.182 | 165 | 28 | 3 | 1 | 124 | 1 | 165 | 1.12e-44 | 155 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272450 | AT4G21660.1 | 77.930 | 512 | 99 | 8 | 15 | 518 | 67 | 572 | 0.0 | 735 |
Msa0272450 | AT4G21660.2 | 76.291 | 523 | 102 | 8 | 15 | 518 | 67 | 586 | 0.0 | 730 |
Msa0272450 | AT4G21660.3 | 81.667 | 360 | 60 | 4 | 162 | 518 | 310 | 666 | 0.0 | 560 |
Msa0272450 | AT4G21660.3 | 73.944 | 142 | 32 | 3 | 15 | 151 | 67 | 208 | 1.43e-51 | 187 |
Msa0272450 | AT1G11520.1 | 66.957 | 115 | 34 | 3 | 381 | 494 | 85 | 196 | 3.82e-40 | 144 |
Find 150 sgRNAs with CRISPR-Local
Find 544 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCAGGTCGATTTGCTTAA+AGG | 0.211596 | 2_3:+3987921 | Msa0272450:intron |
AGGATAAATCGGGTGCTAAA+AGG | 0.234213 | 2_3:+3987803 | Msa0272450:CDS |
CGCCTTCACATCAAGGAAAT+TGG | 0.256686 | 2_3:-3981145 | None:intergenic |
GACTAAACACTGGGGTGATT+TGG | 0.294704 | 2_3:+3986522 | Msa0272450:CDS |
TGATTTGGAGGAGGAGGAGG+AGG | 0.308929 | 2_3:+3986537 | Msa0272450:CDS |
CATAGTAGCTATAACTGTTT+CGG | 0.324690 | 2_3:+3988432 | Msa0272450:three_prime_UTR |
GGGTGATTTGGAGGAGGAGG+AGG | 0.331062 | 2_3:+3986534 | Msa0272450:CDS |
TCTCCGCAACGACTCCGTTT+TGG | 0.339722 | 2_3:-3981286 | None:intergenic |
CACTGGCACCCAGGATAAAT+CGG | 0.339913 | 2_3:+3987792 | Msa0272450:CDS |
CAGTATGGACGCCCACTATA+TGG | 0.344701 | 2_3:+3985936 | Msa0272450:intron |
ATGTCAGCTTTGGCTTTGTT+TGG | 0.352303 | 2_3:-3984565 | None:intergenic |
CGTATCAAACAAGAAGAAAA+AGG | 0.355646 | 2_3:+3982052 | Msa0272450:CDS |
TTCTTGCAGGGGAGCGGCTG+TGG | 0.371015 | 2_3:+3982588 | Msa0272450:intron |
TCCATGGCTTCCAACTCTTC+CGG | 0.371328 | 2_3:-3987978 | None:intergenic |
AAAGCTAGCTCCAGCGGGTA+TGG | 0.384929 | 2_3:-3985791 | None:intergenic |
ATAGTAGCTATAACTGTTTC+GGG | 0.391494 | 2_3:+3988433 | Msa0272450:three_prime_UTR |
TCCCCAAGGGATGTCAGCTT+TGG | 0.394039 | 2_3:-3984575 | None:intergenic |
TGCAGCAGATCCTAAGTTGC+TGG | 0.399151 | 2_3:+3982353 | Msa0272450:CDS |
TTGGTTATCATCCTGGTGGA+TGG | 0.399555 | 2_3:+3985812 | Msa0272450:CDS |
TTAAAGCAAACCTCATAGTT+AGG | 0.402212 | 2_3:-3985987 | None:intergenic |
AAAATTTACATACGTGTGTC+CGG | 0.405526 | 2_3:-3987661 | None:intergenic |
ACGGAAGCAACAGAGAAATA+AGG | 0.414634 | 2_3:+3987473 | Msa0272450:CDS |
TGGTTATCATCCTGGTGGAT+GGG | 0.416487 | 2_3:+3985813 | Msa0272450:CDS |
GGAAGAAGAAGAGGAGGAGG+AGG | 0.417125 | 2_3:+3986567 | Msa0272450:CDS |
ACTTGATAAAGAGGCTTCTC+AGG | 0.422146 | 2_3:-3987498 | None:intergenic |
AGAGGAAGAAGAAGAGGAGG+AGG | 0.423172 | 2_3:+3986564 | Msa0272450:CDS |
TTCTCCTCTCTGTAGTTATG+TGG | 0.425409 | 2_3:+3987765 | Msa0272450:intron |
CCTGATTTCATTGCTGCCAC+TGG | 0.430702 | 2_3:+3983705 | Msa0272450:CDS |
GGAGGAGGAAGAAGAAGGAA+TGG | 0.431152 | 2_3:+3986582 | Msa0272450:CDS |
CCTTCAAAGTCTACCTTCTC+TGG | 0.435209 | 2_3:-3981762 | None:intergenic |
CTGAGGGTGCTCCTCCTCCA+TGG | 0.436159 | 2_3:+3985619 | Msa0272450:CDS |
GCTAGCTTTGGTTATCATCC+TGG | 0.441107 | 2_3:+3985805 | Msa0272450:CDS |
CACTTTACTGCCGGAAGAGT+TGG | 0.443843 | 2_3:+3987968 | Msa0272450:CDS |
GGATAAATCGGGTGCTAAAA+GGG | 0.449282 | 2_3:+3987804 | Msa0272450:CDS |
AAGCCAAAGCTGACATCCCT+TGG | 0.451340 | 2_3:+3984572 | Msa0272450:CDS |
TGTAGTTATGTGGTTGGCAC+TGG | 0.451870 | 2_3:+3987775 | Msa0272450:intron |
ATACCCGCTGGAGCTAGCTT+TGG | 0.455254 | 2_3:+3985793 | Msa0272450:CDS |
TATGCAGGTATGAGGAAGCT+AGG | 0.456420 | 2_3:+3988099 | Msa0272450:intron |
AGCCAAAGCTGACATCCCTT+GGG | 0.457408 | 2_3:+3984573 | Msa0272450:CDS |
GGTTATCATCCTGGTGGATG+GGG | 0.459842 | 2_3:+3985814 | Msa0272450:CDS |
CAGTGTTTAGTCTTATCAAC+TGG | 0.461610 | 2_3:-3986511 | None:intergenic |
CGAGGGTTTAAGAGAAATTG+AGG | 0.470800 | 2_3:-3981237 | None:intergenic |
GCTGTGGCAATCACCAATCC+TGG | 0.472614 | 2_3:+3982604 | Msa0272450:CDS |
CCAGTGGCAGCAATGAAATC+AGG | 0.472805 | 2_3:-3983705 | None:intergenic |
TATTTCTCTGTTGCTTCCGT+AGG | 0.476260 | 2_3:-3987470 | None:intergenic |
TATGAGTTAAACAAGTTCTC+TGG | 0.477229 | 2_3:-3988413 | None:intergenic |
ATACTAGGAAATTGATAAGA+AGG | 0.480660 | 2_3:+3981935 | Msa0272450:intron |
AGAAGAATTGAAACCTGCTT+CGG | 0.481151 | 2_3:-3981317 | None:intergenic |
GAGGAGGAGGAGGAAGAAGA+AGG | 0.483462 | 2_3:+3986577 | Msa0272450:CDS |
AGAAGAGGAAGAAGAAGAGG+AGG | 0.486639 | 2_3:+3986561 | Msa0272450:CDS |
CCTCTCTGTAGTTATGTGGT+TGG | 0.487747 | 2_3:+3987769 | Msa0272450:intron |
GGAAGAAGAGGAAGAAGAAG+AGG | 0.488078 | 2_3:+3986558 | Msa0272450:CDS |
GGAAGAAGAAGGAATGGAAG+AGG | 0.491838 | 2_3:+3986588 | Msa0272450:CDS |
ATCTTCAGCTGAGGGTAAGA+TGG | 0.493392 | 2_3:-3985751 | None:intergenic |
CCAGAGAAGGTAGACTTTGA+AGG | 0.493845 | 2_3:+3981762 | Msa0272450:CDS |
GTATGGGAGCATTCAGTCCT+GGG | 0.498463 | 2_3:-3985774 | None:intergenic |
TCCATGGCTTATTAATATGC+AGG | 0.501939 | 2_3:+3985635 | Msa0272450:CDS |
TTCCAAACACCTACCAGTCC+AGG | 0.501998 | 2_3:-3982622 | None:intergenic |
AAAAGAAATTCATACTTGGC+AGG | 0.504336 | 2_3:-3988011 | None:intergenic |
AAGCTAGCTCCAGCGGGTAT+GGG | 0.504829 | 2_3:-3985790 | None:intergenic |
ATTCCTACCTCAACAACATC+AGG | 0.507591 | 2_3:-3982226 | None:intergenic |
ATGAAATCAGGAAGTTGAAA+GGG | 0.508748 | 2_3:-3983693 | None:intergenic |
TCTGGATTTATGCAGGTATG+AGG | 0.509168 | 2_3:+3988091 | Msa0272450:intron |
ACAAGATCAGCCTAACTATG+AGG | 0.510458 | 2_3:+3985977 | Msa0272450:CDS |
AGGTCAAAAGTCAGATAAAG+TGG | 0.510633 | 2_3:+3987941 | Msa0272450:CDS |
GAAGGTAGACTTTGAAGGCA+TGG | 0.512645 | 2_3:+3981767 | Msa0272450:CDS |
GGTATGGGAGCATTCAGTCC+TGG | 0.514292 | 2_3:-3985775 | None:intergenic |
TGATAAGAAGGATGAGGCGG+AGG | 0.517442 | 2_3:+3981947 | Msa0272450:CDS |
AGAAAGTATACTTCGTCGAC+AGG | 0.517760 | 2_3:-3985844 | None:intergenic |
AAGTCGTGTGATAACATACC+AGG | 0.517875 | 2_3:-3985576 | None:intergenic |
AGAAGAAGGAATGGAAGAGG+AGG | 0.521562 | 2_3:+3986591 | Msa0272450:CDS |
CTCCAATTTCCTTGATGTGA+AGG | 0.522310 | 2_3:+3981143 | None:intergenic |
TAAACCCTCGACGATGGCTG+CGG | 0.522545 | 2_3:+3981250 | Msa0272450:exon |
TTTAGCACCCGATTTATCCT+GGG | 0.522600 | 2_3:-3987800 | None:intergenic |
GCCGGAAGAGTTGGAAGCCA+TGG | 0.523168 | 2_3:+3987977 | Msa0272450:CDS |
TACCCTCAGCTGAAGATCCC+AGG | 0.525500 | 2_3:+3985757 | Msa0272450:CDS |
TAAACACTGGGGTGATTTGG+AGG | 0.529324 | 2_3:+3986525 | Msa0272450:CDS |
CATGGAGGAGGAGCACCCTC+AGG | 0.530319 | 2_3:-3985618 | None:intergenic |
GAAGTTGAAACAAAAGCAAA+GGG | 0.533046 | 2_3:+3984346 | Msa0272450:CDS |
CTCAAGACCTGATGTTGTTG+AGG | 0.536900 | 2_3:+3982219 | Msa0272450:CDS |
TTCCGTAGGTCAATAACATC+AGG | 0.537897 | 2_3:-3987456 | None:intergenic |
AACACCTACCAGTCCAGGAT+TGG | 0.539428 | 2_3:-3982617 | None:intergenic |
ACTGGCACCCAGGATAAATC+GGG | 0.540487 | 2_3:+3987793 | Msa0272450:CDS |
AATGAAATCAGGAAGTTGAA+AGG | 0.540666 | 2_3:-3983694 | None:intergenic |
GCAGGCTTATATTGAGAAAG+AGG | 0.540854 | 2_3:+3984316 | Msa0272450:intron |
GGAGAATACTGATCCGAAGC+AGG | 0.544365 | 2_3:+3981304 | Msa0272450:CDS |
TTTCCTTGATGTGAAGGCGG+TGG | 0.547457 | 2_3:+3981149 | Msa0272450:five_prime_UTR |
AGAAGTTGAAACAAAAGCAA+AGG | 0.550383 | 2_3:+3984345 | Msa0272450:CDS |
CACGACTTGAAAGAAGCTCT+TGG | 0.551012 | 2_3:+3985591 | Msa0272450:CDS |
TCACGAAGGAAAAGAATTTG+AGG | 0.551560 | 2_3:+3984604 | Msa0272450:CDS |
GAAGAGGAGGAATTTGAAGA+TGG | 0.554526 | 2_3:+3986604 | Msa0272450:CDS |
AATCCACCGCCTTCACATCA+AGG | 0.556238 | 2_3:-3981152 | None:intergenic |
TAGCTATAACTGTTTCGGGC+AGG | 0.559786 | 2_3:+3988437 | Msa0272450:three_prime_UTR |
GGACGGCAAGTCGAAGAAGA+AGG | 0.560843 | 2_3:+3988311 | Msa0272450:CDS |
CTGAATGCTCCCATACCCGC+TGG | 0.561728 | 2_3:+3985781 | Msa0272450:CDS |
CTGGGGTGATTTGGAGGAGG+AGG | 0.562341 | 2_3:+3986531 | Msa0272450:CDS |
GGAGGCTTGCCCCATCCACC+AGG | 0.563012 | 2_3:-3985823 | None:intergenic |
AGTGGACGTCACTTTACTGC+CGG | 0.566733 | 2_3:+3987959 | Msa0272450:CDS |
GGAAATTGATAAGAAGGATG+AGG | 0.566793 | 2_3:+3981941 | Msa0272450:intron |
CACCTGATGTTATTGACCTA+CGG | 0.568343 | 2_3:+3987454 | Msa0272450:CDS |
GGCAATCACCAATCCTGGAC+TGG | 0.570853 | 2_3:+3982609 | Msa0272450:CDS |
GTAACACTTCCTTACCAAAA+CGG | 0.572606 | 2_3:+3981272 | Msa0272450:CDS |
TGGTGTGCAGGTAAAGTTGA+GGG | 0.572723 | 2_3:+3985545 | Msa0272450:intron |
TTACCAAAACGGAGTCGTTG+CGG | 0.574219 | 2_3:+3981283 | Msa0272450:CDS |
TGTGACCAATGCCTAGGTAC+AGG | 0.575538 | 2_3:-3982405 | None:intergenic |
AGCTGAGGGTAAGATGGTGG+AGG | 0.578031 | 2_3:-3985745 | None:intergenic |
CTTCGTGATACAACTCCCCA+AGG | 0.578300 | 2_3:-3984589 | None:intergenic |
GCGAGAAGATTTCAGTGACA+TGG | 0.578430 | 2_3:+3988145 | Msa0272450:CDS |
CAGGTATGAGGAAGCTAGGG+AGG | 0.579280 | 2_3:+3988103 | Msa0272450:intron |
ATGTGGTTCTTGCAGGGGAG+CGG | 0.585315 | 2_3:+3982582 | Msa0272450:intron |
AAATTTACATACGTGTGTCC+GGG | 0.587575 | 2_3:-3987660 | None:intergenic |
TTCTCTTAAACCCTCGACGA+TGG | 0.588795 | 2_3:+3981244 | Msa0272450:exon |
ACCTGCATATTAATAAGCCA+TGG | 0.590007 | 2_3:-3985636 | None:intergenic |
AGTCTGTTGATAGTCTATCA+AGG | 0.590579 | 2_3:+3986632 | Msa0272450:CDS |
TGGTATTGAGAAAATCAGAC+AGG | 0.592292 | 2_3:+3983725 | Msa0272450:CDS |
ATTTAGTTTCACTGCTTCAG+AGG | 0.596518 | 2_3:+3981818 | Msa0272450:CDS |
AGCTTTGGTTATCATCCTGG+TGG | 0.598182 | 2_3:+3985808 | Msa0272450:CDS |
TAACCAAAGCTAGCTCCAGC+GGG | 0.600182 | 2_3:-3985796 | None:intergenic |
ATGCAGGTATGAGGAAGCTA+GGG | 0.600493 | 2_3:+3988100 | Msa0272450:intron |
GTCCTGGGATCTTCAGCTGA+GGG | 0.601211 | 2_3:-3985759 | None:intergenic |
GTTACCGCAGCCATCGTCGA+GGG | 0.603962 | 2_3:-3981254 | None:intergenic |
GCAGGATCTTTACTTGTACC+CGG | 0.604637 | 2_3:+3987642 | Msa0272450:CDS |
GCTCAGCACTCCTACTGGAG+TGG | 0.606638 | 2_3:+3987428 | Msa0272450:intron |
TTTCAGTGACATGGTTGCAG+AGG | 0.609120 | 2_3:+3988154 | Msa0272450:CDS |
AAGTTGAGGGAGATGAAACC+TGG | 0.609533 | 2_3:+3985558 | Msa0272450:CDS |
AGTTGATAAGACTAAACACT+GGG | 0.609767 | 2_3:+3986513 | Msa0272450:CDS |
AATTGAGTATGTACCAGAGA+AGG | 0.613096 | 2_3:+3981749 | Msa0272450:CDS |
ATATTAATAAGCCATGGAGG+AGG | 0.613756 | 2_3:-3985630 | None:intergenic |
CTGTACCTGTACCTAGGCAT+TGG | 0.613828 | 2_3:+3982400 | Msa0272450:CDS |
AGAAAGATGCAAGAAAAGGA+CGG | 0.618296 | 2_3:+3988294 | Msa0272450:CDS |
TTCAGCTGAGGGTAAGATGG+TGG | 0.618413 | 2_3:-3985748 | None:intergenic |
TGTGGTTGGCACTGGCACCC+AGG | 0.621505 | 2_3:+3987783 | Msa0272450:CDS |
AATTGATAAGAAGGATGAGG+CGG | 0.627793 | 2_3:+3981944 | Msa0272450:CDS |
TCAGGTGTCTCCACTCCAGT+AGG | 0.629943 | 2_3:-3987438 | None:intergenic |
GAAGCTCTTGGTATGCCTGA+GGG | 0.630070 | 2_3:+3985603 | Msa0272450:CDS |
CAATTTCCTTGATGTGAAGG+CGG | 0.630272 | 2_3:+3981146 | None:intergenic |
ATAACCAAAGCTAGCTCCAG+CGG | 0.635047 | 2_3:-3985797 | None:intergenic |
ACACTGGGGTGATTTGGAGG+AGG | 0.642355 | 2_3:+3986528 | Msa0272450:CDS |
AGTCCTGGGATCTTCAGCTG+AGG | 0.642746 | 2_3:-3985760 | None:intergenic |
CAGTTGATAAGACTAAACAC+TGG | 0.643279 | 2_3:+3986512 | Msa0272450:CDS |
AAGTATACTTCGTCGACAGG+AGG | 0.657544 | 2_3:-3985841 | None:intergenic |
GGAACACTGTACCTGTACCT+AGG | 0.658691 | 2_3:+3982394 | Msa0272450:CDS |
AGAAGCTCTTGGTATGCCTG+AGG | 0.662536 | 2_3:+3985602 | Msa0272450:CDS |
TTCGTGATACAACTCCCCAA+GGG | 0.663464 | 2_3:-3984588 | None:intergenic |
TTGGTGTGCAGGTAAAGTTG+AGG | 0.667122 | 2_3:+3985544 | Msa0272450:intron |
GCCAAAGCTGACATCCCTTG+GGG | 0.669292 | 2_3:+3984574 | Msa0272450:CDS |
TGTTACCGCAGCCATCGTCG+AGG | 0.690229 | 2_3:-3981255 | None:intergenic |
CTTGGGGAGTTGTATCACGA+AGG | 0.695093 | 2_3:+3984590 | Msa0272450:CDS |
TGCATATTAATAAGCCATGG+AGG | 0.699081 | 2_3:-3985633 | None:intergenic |
GTTGATAAGACTAAACACTG+GGG | 0.838951 | 2_3:+3986514 | Msa0272450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTTTT+TGG | + | chr2_3:3988348-3988367 | Msa0272450:three_prime_UTR | 0.0% |
!!! | TATTTTTCTTCTTAATATTT+AGG | + | chr2_3:3981710-3981729 | Msa0272450:intron | 10.0% |
!! | ATTTAAAAAAAAAAACAATG+TGG | + | chr2_3:3987035-3987054 | Msa0272450:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTTGGT+TGG | + | chr2_3:3988355-3988374 | Msa0272450:three_prime_UTR | 10.0% |
!!! | TTGATTTGAATTAAATTGAT+AGG | + | chr2_3:3981405-3981424 | Msa0272450:intron | 15.0% |
!!! | TATTTCATAATTTCATTTTC+AGG | + | chr2_3:3982317-3982336 | Msa0272450:intron | 15.0% |
!! | CATTATAACAAAGATAATAA+AGG | - | chr2_3:3982671-3982690 | None:intergenic | 15.0% |
!!! | ATTATCTTTGTTATAATGAT+TGG | + | chr2_3:3982673-3982692 | Msa0272450:intron | 15.0% |
!!! | TTATCTTTGTTATAATGATT+GGG | + | chr2_3:3982674-3982693 | Msa0272450:intron | 15.0% |
!! | TAATATATTACAGTTCAATA+CGG | - | chr2_3:3982810-3982829 | None:intergenic | 15.0% |
!! | TATAAATTTCAGTTTCATTT+AGG | + | chr2_3:3983006-3983025 | Msa0272450:intron | 15.0% |
!! | ATAAATTTCAGTTTCATTTA+GGG | + | chr2_3:3983007-3983026 | Msa0272450:intron | 15.0% |
!!! | TTGTTTTCAAGATTATAAAT+TGG | - | chr2_3:3983091-3983110 | None:intergenic | 15.0% |
!! | ATAAATAATTGAAGATAAAG+AGG | - | chr2_3:3983557-3983576 | None:intergenic | 15.0% |
!! | AATCTCAAGATTATTTAAAT+AGG | + | chr2_3:3983964-3983983 | Msa0272450:intron | 15.0% |
!!! | TAAAGAATTTATGTAGATTT+TGG | + | chr2_3:3984008-3984027 | Msa0272450:intron | 15.0% |
!!! | AAAGAATTTATGTAGATTTT+GGG | + | chr2_3:3984009-3984028 | Msa0272450:intron | 15.0% |
!! | TAAATGAACTTTATATGAAA+TGG | + | chr2_3:3984198-3984217 | Msa0272450:intron | 15.0% |
!! | AATAAAATTGTAAAACACAA+AGG | - | chr2_3:3984434-3984453 | None:intergenic | 15.0% |
!! | TAAAATAGTTATAGAACATA+TGG | - | chr2_3:3984481-3984500 | None:intergenic | 15.0% |
!! | AAATATAACTATTAGAAAGT+AGG | - | chr2_3:3984507-3984526 | None:intergenic | 15.0% |
!! | TTTCTAATAGTTATATTTCT+TGG | + | chr2_3:3984509-3984528 | Msa0272450:intron | 15.0% |
!!! | TCGTTTTCTTTTAATTATTT+AGG | + | chr2_3:3984835-3984854 | Msa0272450:intron | 15.0% |
!! | TATACTACTGAAATTATTAT+TGG | + | chr2_3:3984953-3984972 | Msa0272450:intron | 15.0% |
!! | ATACTACTGAAATTATTATT+GGG | + | chr2_3:3984954-3984973 | Msa0272450:intron | 15.0% |
!! | AATATTTCATACATTTACAT+TGG | - | chr2_3:3985142-3985161 | None:intergenic | 15.0% |
!! | TTACTTATATATTATTGGAA+CGG | + | chr2_3:3985497-3985516 | Msa0272450:intron | 15.0% |
!!! | ATAAATTCACTGTTTATTTT+TGG | + | chr2_3:3985869-3985888 | Msa0272450:intron | 15.0% |
!!! | ATAATTGATTTTCTTTATGT+TGG | - | chr2_3:3986824-3986843 | None:intergenic | 15.0% |
!!! | TTTTCAATGATATTTGTTTT+AGG | + | chr2_3:3987862-3987881 | Msa0272450:intron | 15.0% |
!!! | TTTCATGTTTTTTTCTTTTT+TGG | + | chr2_3:3987895-3987914 | Msa0272450:intron | 15.0% |
!! | TTGAGGAAAAAATTGAAATA+TGG | - | chr2_3:3981223-3981242 | None:intergenic | 20.0% |
!! | AATCAATATTGTAGTGAATT+AGG | + | chr2_3:3981472-3981491 | Msa0272450:intron | 20.0% |
!! | ATCAATATTGTAGTGAATTA+GGG | + | chr2_3:3981473-3981492 | Msa0272450:intron | 20.0% |
!! | TTGTATATCTAAGTAGATAA+TGG | + | chr2_3:3981622-3981641 | Msa0272450:intron | 20.0% |
!!! | TAGATAATGGTTTTCATAAT+TGG | + | chr2_3:3981635-3981654 | Msa0272450:intron | 20.0% |
!!! | TTGTTTTGAATTTTGATTGA+AGG | + | chr2_3:3981900-3981919 | Msa0272450:intron | 20.0% |
!!! | AAGATTAAACTTTTTCAGAA+TGG | - | chr2_3:3982150-3982169 | None:intergenic | 20.0% |
!! | ATGAAATATCATTTGCATAA+TGG | - | chr2_3:3982305-3982324 | None:intergenic | 20.0% |
!!! | ATAATTTCATTTTCAGGTTT+GGG | + | chr2_3:3982323-3982342 | Msa0272450:intron | 20.0% |
!! | ATCTTATATATGTATGTATG+TGG | + | chr2_3:3982565-3982584 | Msa0272450:intron | 20.0% |
!!! | ACTTGTATTGTTTTATATGA+TGG | + | chr2_3:3982711-3982730 | Msa0272450:intron | 20.0% |
!!! | CTTGTATTGTTTTATATGAT+GGG | + | chr2_3:3982712-3982731 | Msa0272450:intron | 20.0% |
!!! | TTGTATTGTTTTATATGATG+GGG | + | chr2_3:3982713-3982732 | Msa0272450:intron | 20.0% |
!! | TTTATAATCTTGAAAACAAG+TGG | + | chr2_3:3983092-3983111 | Msa0272450:intron | 20.0% |
!! | CAAAAAAGCCATATAATTAT+AGG | - | chr2_3:3983435-3983454 | None:intergenic | 20.0% |
!!! | CTTTTTTGCATGATATTAAT+GGG | + | chr2_3:3983447-3983466 | Msa0272450:intron | 20.0% |
!! | TCAGCATCAATTATATAATT+GGG | - | chr2_3:3983596-3983615 | None:intergenic | 20.0% |
!! | TTAAATAATCTTGAGATTCT+TGG | - | chr2_3:3983962-3983981 | None:intergenic | 20.0% |
!! | AAAAATGGATATAGATTATC+AGG | + | chr2_3:3984391-3984410 | Msa0272450:CDS | 20.0% |
!! | TGTTAAATAAAATCAACAAG+TGG | + | chr2_3:3984928-3984947 | Msa0272450:intron | 20.0% |
!!! | TTTCCAGTATTTTGTTTATT+AGG | + | chr2_3:3985062-3985081 | Msa0272450:intron | 20.0% |
!!! | ACAAGTTTTCACTTTTAATT+TGG | + | chr2_3:3985464-3985483 | Msa0272450:intron | 20.0% |
!! | GTTATACTATTTAATTAGAG+TGG | + | chr2_3:3986016-3986035 | Msa0272450:intron | 20.0% |
!! | ACAATGAAGTTAGAAAAAAT+GGG | - | chr2_3:3986075-3986094 | None:intergenic | 20.0% |
!! | AACAATGAAGTTAGAAAAAA+TGG | - | chr2_3:3986076-3986095 | None:intergenic | 20.0% |
!!! | ATTTTTTCTAACTTCATTGT+TGG | + | chr2_3:3986075-3986094 | Msa0272450:intron | 20.0% |
!!! | TTTTTTCTAACTTCATTGTT+GGG | + | chr2_3:3986076-3986095 | Msa0272450:intron | 20.0% |
!! | CAAAAAGAAAACTACATATA+TGG | - | chr2_3:3986162-3986181 | None:intergenic | 20.0% |
!!! | AGGAATATATTTTGAAGTTT+TGG | - | chr2_3:3986267-3986286 | None:intergenic | 20.0% |
!!! | TTTTTCATTCAACCAATAAA+AGG | - | chr2_3:3986367-3986386 | None:intergenic | 20.0% |
!!! | TTTTAAAGTTGACATTGTAT+GGG | - | chr2_3:3986426-3986445 | None:intergenic | 20.0% |
!!! | ATTTTAAAGTTGACATTGTA+TGG | - | chr2_3:3986427-3986446 | None:intergenic | 20.0% |
!!! | TATTTCTTTTCATAATTTGC+TGG | + | chr2_3:3986466-3986485 | Msa0272450:intron | 20.0% |
!! | ATGTTAACAAGATAATGAAA+TGG | - | chr2_3:3986671-3986690 | None:intergenic | 20.0% |
!!! | CTAGTTTTTTTCTTTTGAAA+GGG | + | chr2_3:3986770-3986789 | Msa0272450:intron | 20.0% |
!! | ATGTTGAGTTATTTATTAGT+AGG | + | chr2_3:3986938-3986957 | Msa0272450:intron | 20.0% |
!! | TGTTGAGTTATTTATTAGTA+GGG | + | chr2_3:3986939-3986958 | Msa0272450:intron | 20.0% |
!! | TCATTTAGTAAATTTATCAG+AGG | + | chr2_3:3986962-3986981 | Msa0272450:intron | 20.0% |
!!! | TTTGGTTCATTTTTTTTAGA+GGG | - | chr2_3:3987321-3987340 | None:intergenic | 20.0% |
!!! | TAGATAACGGAAAAATAAAA+AGG | - | chr2_3:3987587-3987606 | None:intergenic | 20.0% |
!! | TATCAAGAAACAAACAATTA+TGG | - | chr2_3:3987728-3987747 | None:intergenic | 20.0% |
!!! | AAGATGTTTTCTCTTTTAAT+AGG | + | chr2_3:3987828-3987847 | Msa0272450:intron | 20.0% |
!!! | AGATGTTTTCTCTTTTAATA+GGG | + | chr2_3:3987829-3987848 | Msa0272450:intron | 20.0% |
! | ACGAAAATCAAATGAATCAA+AGG | - | chr2_3:3981365-3981384 | None:intergenic | 25.0% |
!! | GATTTTCGTTGTTTATAGAT+TGG | + | chr2_3:3981376-3981395 | Msa0272450:intron | 25.0% |
! | ATACTAGGAAATTGATAAGA+AGG | + | chr2_3:3981935-3981954 | Msa0272450:intron | 25.0% |
!! | ATTGCACAATTAGTTTGAAA+TGG | + | chr2_3:3982256-3982275 | Msa0272450:intron | 25.0% |
!! | ACAATTAGTTTGAAATGGTT+GGG | + | chr2_3:3982261-3982280 | Msa0272450:intron | 25.0% |
!!! | CATAATTTCATTTTCAGGTT+TGG | + | chr2_3:3982322-3982341 | Msa0272450:intron | 25.0% |
!!! | TGGTGTTTTTGAAATCTTAT+CGG | + | chr2_3:3982373-3982392 | Msa0272450:CDS | 25.0% |
!! | ACAGAAAAGAAAATTTTTGC+AGG | + | chr2_3:3982425-3982444 | Msa0272450:intron | 25.0% |
! | CCTATAATAACTATCAAGTT+AGG | - | chr2_3:3982462-3982481 | None:intergenic | 25.0% |
!! | CCTAACTTGATAGTTATTAT+AGG | + | chr2_3:3982459-3982478 | Msa0272450:intron | 25.0% |
! | TGTTATAATGATTGGGAATA+TGG | + | chr2_3:3982681-3982700 | Msa0272450:intron | 25.0% |
!!! | AAATATCCTCGTTTATTTTC+AGG | - | chr2_3:3983368-3983387 | None:intergenic | 25.0% |
!!! | GCTTTTTTGCATGATATTAA+TGG | + | chr2_3:3983446-3983465 | Msa0272450:intron | 25.0% |
! | GTCAGCATCAATTATATAAT+TGG | - | chr2_3:3983597-3983616 | None:intergenic | 25.0% |
!!! | GAATGTTCACTTATTTTGAT+GGG | - | chr2_3:3983809-3983828 | None:intergenic | 25.0% |
!!! | AGAATGTTCACTTATTTTGA+TGG | - | chr2_3:3983810-3983829 | None:intergenic | 25.0% |
! | TACAGAAAAAATGCAATTTC+AGG | - | chr2_3:3983869-3983888 | None:intergenic | 25.0% |
! | AGATTATTTAAATAGGTAGC+TGG | + | chr2_3:3983971-3983990 | Msa0272450:intron | 25.0% |
! | GATTATTTAAATAGGTAGCT+GGG | + | chr2_3:3983972-3983991 | Msa0272450:intron | 25.0% |
!!! | AATTTATGTAGATTTTGGGA+TGG | + | chr2_3:3984013-3984032 | Msa0272450:intron | 25.0% |
! | CAGTAGAGATATGTTATATT+GGG | + | chr2_3:3984128-3984147 | Msa0272450:intron | 25.0% |
! | AGTAGAGATATGTTATATTG+GGG | + | chr2_3:3984129-3984148 | Msa0272450:intron | 25.0% |
!!! | ATATCCATTTTTCCCATTTT+TGG | - | chr2_3:3984383-3984402 | None:intergenic | 25.0% |
! | ACTTAAAAAATGCATCATGA+AGG | - | chr2_3:3984544-3984563 | None:intergenic | 25.0% |
!!! | TCTTCAATACTTTTTAGCAA+GGG | - | chr2_3:3984635-3984654 | None:intergenic | 25.0% |
!!! | TTCTTCAATACTTTTTAGCA+AGG | - | chr2_3:3984636-3984655 | None:intergenic | 25.0% |
! | ATATAGTGTAACTTATGCTT+TGG | + | chr2_3:3984663-3984682 | Msa0272450:intron | 25.0% |
!!! | ATTTATTTCTTGCGACATTT+TGG | + | chr2_3:3984694-3984713 | Msa0272450:intron | 25.0% |
! | TGACCTAATAAACAAAATAC+TGG | - | chr2_3:3985068-3985087 | None:intergenic | 25.0% |
!! | TGAAATATTTCTCTTTTGAG+AGG | + | chr2_3:3985153-3985172 | Msa0272450:intron | 25.0% |
!!! | ATTAGTTTGTATGATGACAT+TGG | + | chr2_3:3985521-3985540 | Msa0272450:intron | 25.0% |
! | AAGCTGGTTAATAAGATAAA+GGG | - | chr2_3:3985899-3985918 | None:intergenic | 25.0% |
! | TAAGCTGGTTAATAAGATAA+AGG | - | chr2_3:3985900-3985919 | None:intergenic | 25.0% |
! | ACAATGTTTACATTAAACAC+AGG | - | chr2_3:3986193-3986212 | None:intergenic | 25.0% |
!!! | CTATTTCTTGATTACTCTTT+TGG | + | chr2_3:3986292-3986311 | Msa0272450:intron | 25.0% |
!! | TTTAAAGTTGACATTGTATG+GGG | - | chr2_3:3986425-3986444 | None:intergenic | 25.0% |
! | ATCTTGTTAACATGTAATGT+AGG | + | chr2_3:3986678-3986697 | Msa0272450:intron | 25.0% |
!!! | ATTTTACCAAAAGAAAGTGT+GGG | + | chr2_3:3986719-3986738 | Msa0272450:intron | 25.0% |
! | GAAAAAAACTAGCAAAATCA+AGG | - | chr2_3:3986762-3986781 | None:intergenic | 25.0% |
!!! | GCTAGTTTTTTTCTTTTGAA+AGG | + | chr2_3:3986769-3986788 | Msa0272450:intron | 25.0% |
! | AAAGGGATTACTATTCTTAA+TGG | + | chr2_3:3986787-3986806 | Msa0272450:intron | 25.0% |
!! | TTGATTTTCTTTATGTTGGT+GGG | - | chr2_3:3986820-3986839 | None:intergenic | 25.0% |
!!! | ATTGATTTTCTTTATGTTGG+TGG | - | chr2_3:3986821-3986840 | None:intergenic | 25.0% |
! | GTCTTTCAATTAAGCTTATT+TGG | + | chr2_3:3986853-3986872 | Msa0272450:intron | 25.0% |
!!! | AGATTTTAAAATACCGTGTT+TGG | + | chr2_3:3987133-3987152 | Msa0272450:intron | 25.0% |
! | TATGACCTCAAATATTACAA+GGG | - | chr2_3:3987210-3987229 | None:intergenic | 25.0% |
! | ATATGACCTCAAATATTACA+AGG | - | chr2_3:3987211-3987230 | None:intergenic | 25.0% |
! | TGAGGTCATATTAATTATAC+AGG | + | chr2_3:3987220-3987239 | Msa0272450:intron | 25.0% |
!!! | TTCATTTTTTTTAGAGGGAA+GGG | - | chr2_3:3987316-3987335 | None:intergenic | 25.0% |
!!! | GTTTGGTTCATTTTTTTTAG+AGG | - | chr2_3:3987322-3987341 | None:intergenic | 25.0% |
! | ATTGACAGTAAATAACTGTA+CGG | - | chr2_3:3987370-3987389 | None:intergenic | 25.0% |
!! | TATTTTTCCGTTATCTATGA+AGG | + | chr2_3:3987590-3987609 | Msa0272450:intron | 25.0% |
! | GAAGAGAAAGAAGAAAAAAT+TGG | + | chr2_3:3987618-3987637 | Msa0272450:CDS | 25.0% |
!!! | TCAATGATATTTGTTTTAGG+AGG | + | chr2_3:3987865-3987884 | Msa0272450:intron | 25.0% |
! | GATGAAAAGAAATTCATACT+TGG | - | chr2_3:3988018-3988037 | None:intergenic | 25.0% |
! | GTTTCTATTTCAGATTTAGT+GGG | + | chr2_3:3988038-3988057 | Msa0272450:intron | 25.0% |
! | AAGTTAGATACAGATCATAA+TGG | - | chr2_3:3988237-3988256 | None:intergenic | 25.0% |
! | TTATGATCTGTATCTAACTT+TGG | + | chr2_3:3988237-3988256 | Msa0272450:intron | 25.0% |
!! | TTTTTCTTTTCTTCTCATTC+TGG | - | chr2_3:3988275-3988294 | None:intergenic | 25.0% |
! | AAAAAGAAAGATGCAAGAAA+AGG | + | chr2_3:3988290-3988309 | Msa0272450:CDS | 25.0% |
TTTCGTTGTTTATAGATTGG+AGG | + | chr2_3:3981379-3981398 | Msa0272450:intron | 30.0% | |
!! | AGGTTTGCTATTGTAATACT+AGG | + | chr2_3:3981920-3981939 | Msa0272450:intron | 30.0% |
GATAACGAGCAAAAAGAAAA+AGG | + | chr2_3:3982029-3982048 | Msa0272450:CDS | 30.0% | |
CGTATCAAACAAGAAGAAAA+AGG | + | chr2_3:3982052-3982071 | Msa0272450:CDS | 30.0% | |
!! | AATTTGTTGTTGTATTCCTG+TGG | + | chr2_3:3982120-3982139 | Msa0272450:intron | 30.0% |
! | CACAATTAGTTTGAAATGGT+TGG | + | chr2_3:3982260-3982279 | Msa0272450:intron | 30.0% |
TGAAAACGATGAAGTCAATA+AGG | + | chr2_3:3982539-3982558 | Msa0272450:intron | 30.0% | |
AATAAAGGAGAAACAACTCA+AGG | - | chr2_3:3982656-3982675 | None:intergenic | 30.0% | |
!! | TGTTTTATATGATGGGGAAT+AGG | + | chr2_3:3982719-3982738 | Msa0272450:intron | 30.0% |
!! | TATGAATTGGTGTTATGGTT+TGG | - | chr2_3:3982783-3982802 | None:intergenic | 30.0% |
!! | GATCTTATGAATTGGTGTTA+TGG | - | chr2_3:3982788-3982807 | None:intergenic | 30.0% |
TCAATACGGATCTTATGAAT+TGG | - | chr2_3:3982796-3982815 | None:intergenic | 30.0% | |
TTACAAACGAACTAGACTAA+TGG | + | chr2_3:3982831-3982850 | Msa0272450:intron | 30.0% | |
AAAATTGTATAGCAACGGTT+CGG | - | chr2_3:3982871-3982890 | None:intergenic | 30.0% | |
CAAAAAAACAGTTCAACTTG+GGG | - | chr2_3:3982894-3982913 | None:intergenic | 30.0% | |
GCAAAAAAACAGTTCAACTT+GGG | - | chr2_3:3982895-3982914 | None:intergenic | 30.0% | |
! | TGTGCATATACAAAAGCTTT+TGG | + | chr2_3:3982956-3982975 | Msa0272450:intron | 30.0% |
! | GAATCCTAAATCCATTTTCA+CGG | - | chr2_3:3983272-3983291 | None:intergenic | 30.0% |
AAACGAGGATATTTGTAGTT+CGG | + | chr2_3:3983374-3983393 | Msa0272450:intron | 30.0% | |
ATAATTATAGGTCCCCAATT+AGG | - | chr2_3:3983423-3983442 | None:intergenic | 30.0% | |
ATTGGGGACCTATAATTATA+TGG | + | chr2_3:3983424-3983443 | Msa0272450:intron | 30.0% | |
ATGAAATCAGGAAGTTGAAA+GGG | - | chr2_3:3983696-3983715 | None:intergenic | 30.0% | |
AATGAAATCAGGAAGTTGAA+AGG | - | chr2_3:3983697-3983716 | None:intergenic | 30.0% | |
ACACACATATATATGCAAAC+AGG | - | chr2_3:3983759-3983778 | None:intergenic | 30.0% | |
GCAGTAGAGATATGTTATAT+TGG | + | chr2_3:3984127-3984146 | Msa0272450:intron | 30.0% | |
TGAAACAGAAATTCAACAGA+GGG | - | chr2_3:3984178-3984197 | None:intergenic | 30.0% | |
ATGAAACAGAAATTCAACAG+AGG | - | chr2_3:3984179-3984198 | None:intergenic | 30.0% | |
TAGATGAATGTATGTAGCAT+AGG | - | chr2_3:3984231-3984250 | None:intergenic | 30.0% | |
AGAAGTTGAAACAAAAGCAA+AGG | + | chr2_3:3984345-3984364 | Msa0272450:CDS | 30.0% | |
GAAGTTGAAACAAAAGCAAA+GGG | + | chr2_3:3984346-3984365 | Msa0272450:CDS | 30.0% | |
AGTTATATTTCTTGGTTGCT+AGG | + | chr2_3:3984517-3984536 | Msa0272450:intron | 30.0% | |
!!! | TTTGGTTTTGTTGTAGTGTT+AGG | + | chr2_3:3984712-3984731 | Msa0272450:intron | 30.0% |
CTGTGAAGTAAAAGTTACTA+TGG | - | chr2_3:3984753-3984772 | None:intergenic | 30.0% | |
! | CATAGTAACTTTTACTTCAC+AGG | + | chr2_3:3984751-3984770 | Msa0272450:intron | 30.0% |
GAAACAAACTAATGCAAAAG+AGG | - | chr2_3:3985002-3985021 | None:intergenic | 30.0% | |
!! | ATATTTCTCTTTTGAGAGGT+TGG | + | chr2_3:3985157-3985176 | Msa0272450:intron | 30.0% |
TTAGATCTTTCGTCAAAAGA+GGG | - | chr2_3:3985368-3985387 | None:intergenic | 30.0% | |
!! | CTTATTCTAGCTTTAACTAG+AGG | + | chr2_3:3985399-3985418 | Msa0272450:intron | 30.0% |
! | ATTTTTCGTTGATCCTGTAT+TGG | + | chr2_3:3985677-3985696 | Msa0272450:intron | 30.0% |
TAGAACACGTTTAATGTACA+AGG | - | chr2_3:3985703-3985722 | None:intergenic | 30.0% | |
!!! | TATTTTTTTCCCCAGAGATA+TGG | + | chr2_3:3985721-3985740 | Msa0272450:intron | 30.0% |
AGCTGGTTAATAAGATAAAG+GGG | - | chr2_3:3985898-3985917 | None:intergenic | 30.0% | |
GTATCTTCATCTAAACAGTA+TGG | + | chr2_3:3985921-3985940 | Msa0272450:intron | 30.0% | |
CAAAAACATCTCCATATAGT+GGG | - | chr2_3:3985950-3985969 | None:intergenic | 30.0% | |
TTAAAGCAAACCTCATAGTT+AGG | - | chr2_3:3985990-3986009 | None:intergenic | 30.0% | |
ATGAAGTTAGAAAAAATGGG+TGG | - | chr2_3:3986072-3986091 | None:intergenic | 30.0% | |
!!! | TTTGAAGTTTTGGATAAGCA+AGG | - | chr2_3:3986257-3986276 | None:intergenic | 30.0% |
!! | AGTTGATAAGACTAAACACT+GGG | + | chr2_3:3986513-3986532 | Msa0272450:CDS | 30.0% |
! | CATTTTACCAAAAGAAAGTG+TGG | + | chr2_3:3986718-3986737 | Msa0272450:intron | 30.0% |
! | AGTAAATTTATCAGAGGTAC+TGG | + | chr2_3:3986968-3986987 | Msa0272450:intron | 30.0% |
!! | GTAAATTTATCAGAGGTACT+GGG | + | chr2_3:3986969-3986988 | Msa0272450:intron | 30.0% |
AAAAAACAATGTGGATATGC+AGG | + | chr2_3:3987044-3987063 | Msa0272450:intron | 30.0% | |
TTTCACCCTTGTAATATTTG+AGG | + | chr2_3:3987202-3987221 | Msa0272450:intron | 30.0% | |
!!! | TCATTTTTTTTAGAGGGAAG+GGG | - | chr2_3:3987315-3987334 | None:intergenic | 30.0% |
!!! | GTTCATTTTTTTTAGAGGGA+AGG | - | chr2_3:3987317-3987336 | None:intergenic | 30.0% |
TACTCTAAATCTTAGTGGTT+TGG | - | chr2_3:3987339-3987358 | None:intergenic | 30.0% | |
TGGATTACTCTAAATCTTAG+TGG | - | chr2_3:3987344-3987363 | None:intergenic | 30.0% | |
TTGACAGTAAATAACTGTAC+GGG | - | chr2_3:3987369-3987388 | None:intergenic | 30.0% | |
GAAAAACTCACTTGATAAAG+AGG | - | chr2_3:3987510-3987529 | None:intergenic | 30.0% | |
GCTGTTAAAAAATGTTCAGT+AGG | - | chr2_3:3987532-3987551 | None:intergenic | 30.0% | |
AAAGAAGAAAAAATTGGTGC+AGG | + | chr2_3:3987624-3987643 | Msa0272450:CDS | 30.0% | |
AAAATTTACATACGTGTGTC+CGG | - | chr2_3:3987664-3987683 | None:intergenic | 30.0% | |
! | TTTCTCTTTTAATAGGGTAG+AGG | + | chr2_3:3987835-3987854 | Msa0272450:intron | 30.0% |
! | TTCTCTTTTAATAGGGTAGA+GGG | + | chr2_3:3987836-3987855 | Msa0272450:intron | 30.0% |
!!! | TTTTCTTTTTTGGAACTTCC+AGG | + | chr2_3:3987905-3987924 | Msa0272450:intron | 30.0% |
AAAAGAAATTCATACTTGGC+AGG | - | chr2_3:3988014-3988033 | None:intergenic | 30.0% | |
CGTTTCTATTTCAGATTTAG+TGG | + | chr2_3:3988037-3988056 | Msa0272450:intron | 30.0% | |
AAGAAATGATTTCTTACCTC+TGG | + | chr2_3:3988073-3988092 | Msa0272450:intron | 30.0% | |
AACTAACCCTACTAATCATA+TGG | + | chr2_3:3988183-3988202 | Msa0272450:intron | 30.0% | |
ACTAACCCTACTAATCATAT+GGG | + | chr2_3:3988184-3988203 | Msa0272450:intron | 30.0% | |
! | ATCTAACTTTGGTCTTTATC+TGG | + | chr2_3:3988248-3988267 | Msa0272450:intron | 30.0% |
TATGAGTTAAACAAGTTCTC+TGG | - | chr2_3:3988416-3988435 | None:intergenic | 30.0% | |
CATAGTAGCTATAACTGTTT+CGG | + | chr2_3:3988432-3988451 | Msa0272450:three_prime_UTR | 30.0% | |
ATAGTAGCTATAACTGTTTC+GGG | + | chr2_3:3988433-3988452 | Msa0272450:three_prime_UTR | 30.0% | |
GTAACACTTCCTTACCAAAA+CGG | + | chr2_3:3981272-3981291 | Msa0272450:CDS | 35.0% | |
AGAAGAATTGAAACCTGCTT+CGG | - | chr2_3:3981320-3981339 | None:intergenic | 35.0% | |
AATTGAGTATGTACCAGAGA+AGG | + | chr2_3:3981749-3981768 | Msa0272450:CDS | 35.0% | |
! | ATTTAGTTTCACTGCTTCAG+AGG | + | chr2_3:3981818-3981837 | Msa0272450:CDS | 35.0% |
! | TTTTGTCGTTGCAACTTCTT+TGG | + | chr2_3:3981873-3981892 | Msa0272450:intron | 35.0% |
GGAAATTGATAAGAAGGATG+AGG | + | chr2_3:3981941-3981960 | Msa0272450:intron | 35.0% | |
AATTGATAAGAAGGATGAGG+CGG | + | chr2_3:3981944-3981963 | Msa0272450:CDS | 35.0% | |
TTCAAAAACACCAGCAACTT+AGG | - | chr2_3:3982366-3982385 | None:intergenic | 35.0% | |
AATGATGTAAGCATGTCTGA+TGG | + | chr2_3:3982484-3982503 | Msa0272450:intron | 35.0% | |
ATTACTACATCACTCATGCA+GGG | - | chr2_3:3982515-3982534 | None:intergenic | 35.0% | |
TATTACTACATCACTCATGC+AGG | - | chr2_3:3982516-3982535 | None:intergenic | 35.0% | |
TGCATGAGTGATGTAGTAAT+AGG | + | chr2_3:3982515-3982534 | Msa0272450:intron | 35.0% | |
GCATGAGTGATGTAGTAATA+GGG | + | chr2_3:3982516-3982535 | Msa0272450:intron | 35.0% | |
TGGGGAAAATTGTATAGCAA+CGG | - | chr2_3:3982876-3982895 | None:intergenic | 35.0% | |
CGCAAAAAAACAGTTCAACT+TGG | - | chr2_3:3982896-3982915 | None:intergenic | 35.0% | |
! | TATACAAAAGCTTTTGGCGA+TGG | + | chr2_3:3982962-3982981 | Msa0272450:intron | 35.0% |
ATGGATGAAACAGTGGTTAT+GGG | + | chr2_3:3982981-3983000 | Msa0272450:intron | 35.0% | |
AGGGATTAATTCCCAAATTG+TGG | + | chr2_3:3983026-3983045 | Msa0272450:intron | 35.0% | |
GGGATTAATTCCCAAATTGT+GGG | + | chr2_3:3983027-3983046 | Msa0272450:intron | 35.0% | |
AATTCCCAAATTGTGGGAAA+AGG | + | chr2_3:3983033-3983052 | Msa0272450:intron | 35.0% | |
ATTCCCAAATTGTGGGAAAA+GGG | + | chr2_3:3983034-3983053 | Msa0272450:intron | 35.0% | |
! | ATTCCCTTTTCCCACAATTT+GGG | - | chr2_3:3983040-3983059 | None:intergenic | 35.0% |
! | TAAATCCATTTTCACGGTCA+CGG | - | chr2_3:3983266-3983285 | None:intergenic | 35.0% |
CATTGATAGAGAGAGGATTT+AGG | + | chr2_3:3983294-3983313 | Msa0272450:intron | 35.0% | |
! | AGAGGATTTAGGTTTACAAG+CGG | + | chr2_3:3983305-3983324 | Msa0272450:intron | 35.0% |
!!! | TCCTCGTTTATTTTCAGGTT+CGG | - | chr2_3:3983363-3983382 | None:intergenic | 35.0% |
!!! | TTCGGTTCAGTTTTTTGTTG+TGG | + | chr2_3:3983392-3983411 | Msa0272450:intron | 35.0% |
!!! | TCGGTTCAGTTTTTTGTTGT+GGG | + | chr2_3:3983393-3983412 | Msa0272450:intron | 35.0% |
TGGGTATTTATTCACGACAA+AGG | + | chr2_3:3983466-3983485 | Msa0272450:intron | 35.0% | |
!! | CAGAAGCTGTGTTATTGTTT+TGG | + | chr2_3:3983643-3983662 | Msa0272450:intron | 35.0% |
! | TCTGATTTTCTCAATACCAG+TGG | - | chr2_3:3983724-3983743 | None:intergenic | 35.0% |
! | TGGTATTGAGAAAATCAGAC+AGG | + | chr2_3:3983725-3983744 | Msa0272450:CDS | 35.0% |
!!! | TGTTCACTTATTTTGATGGG+AGG | - | chr2_3:3983806-3983825 | None:intergenic | 35.0% |
!!! | TATGTAGATTTTGGGATGGA+TGG | + | chr2_3:3984017-3984036 | Msa0272450:intron | 35.0% |
!!! | ATGTAGATTTTGGGATGGAT+GGG | + | chr2_3:3984018-3984037 | Msa0272450:intron | 35.0% |
ACTTATAGCAAGTTAGAGTG+TGG | + | chr2_3:3984066-3984085 | Msa0272450:intron | 35.0% | |
CTTATAGCAAGTTAGAGTGT+GGG | + | chr2_3:3984067-3984086 | Msa0272450:intron | 35.0% | |
TGTTATATTGGGGATGTTGA+TGG | + | chr2_3:3984139-3984158 | Msa0272450:intron | 35.0% | |
AAACAGCAACTACAACAATC+TGG | - | chr2_3:3984273-3984292 | None:intergenic | 35.0% | |
GAACGTATGCAACCAAAAAT+GGG | + | chr2_3:3984368-3984387 | Msa0272450:CDS | 35.0% | |
GCAACCAAAAATGGGAAAAA+TGG | + | chr2_3:3984376-3984395 | Msa0272450:CDS | 35.0% | |
TCACGAAGGAAAAGAATTTG+AGG | + | chr2_3:3984604-3984623 | Msa0272450:CDS | 35.0% | |
! | TAACTTTTACTTCACAGGAG+TGG | + | chr2_3:3984756-3984775 | Msa0272450:intron | 35.0% |
GATCTCTAATGTTGAGCAAT+AGG | + | chr2_3:3984778-3984797 | Msa0272450:intron | 35.0% | |
AATGTTGAGCAATAGGTGTT+TGG | + | chr2_3:3984785-3984804 | Msa0272450:intron | 35.0% | |
TTCCACTCAAATCAATCGTT+GGG | - | chr2_3:3984811-3984830 | None:intergenic | 35.0% | |
! | CAATCTATGTTTTTCCCATC+AGG | - | chr2_3:3985031-3985050 | None:intergenic | 35.0% |
AGAAAGACACAAAATGGAGA+AGG | - | chr2_3:3985216-3985235 | None:intergenic | 35.0% | |
TTCGAGAGAAAGACACAAAA+TGG | - | chr2_3:3985222-3985241 | None:intergenic | 35.0% | |
TAGATCTTTCGTCAAAAGAG+GGG | - | chr2_3:3985367-3985386 | None:intergenic | 35.0% | |
CTTAGATCTTTCGTCAAAAG+AGG | - | chr2_3:3985369-3985388 | None:intergenic | 35.0% | |
GTTTGTATGATGACATTGGT+TGG | + | chr2_3:3985525-3985544 | Msa0272450:intron | 35.0% | |
ATATTAATAAGCCATGGAGG+AGG | - | chr2_3:3985633-3985652 | None:intergenic | 35.0% | |
TGCATATTAATAAGCCATGG+AGG | - | chr2_3:3985636-3985655 | None:intergenic | 35.0% | |
TCCATGGCTTATTAATATGC+AGG | + | chr2_3:3985635-3985654 | Msa0272450:CDS | 35.0% | |
ACCTGCATATTAATAAGCCA+TGG | - | chr2_3:3985639-3985658 | None:intergenic | 35.0% | |
GGCTTATTAATATGCAGGTA+AGG | + | chr2_3:3985640-3985659 | Msa0272450:intron | 35.0% | |
TTAATGTACAAGGCCAATAC+AGG | - | chr2_3:3985693-3985712 | None:intergenic | 35.0% | |
GCTGGTTAATAAGATAAAGG+GGG | - | chr2_3:3985897-3985916 | None:intergenic | 35.0% | |
TTAGATGAAGATACGTAAGC+TGG | - | chr2_3:3985915-3985934 | None:intergenic | 35.0% | |
CCAAAAACATCTCCATATAG+TGG | - | chr2_3:3985951-3985970 | None:intergenic | 35.0% | |
! | CCACTATATGGAGATGTTTT+TGG | + | chr2_3:3985948-3985967 | Msa0272450:CDS | 35.0% |
GTAATCAAGAAATAGCACTG+AGG | - | chr2_3:3986287-3986306 | None:intergenic | 35.0% | |
! | TCTTGATTACTCTTTTGGTG+TGG | + | chr2_3:3986297-3986316 | Msa0272450:intron | 35.0% |
ATAAAAGGACTGCCTCTTAT+GGG | - | chr2_3:3986352-3986371 | None:intergenic | 35.0% | |
AATAAAAGGACTGCCTCTTA+TGG | - | chr2_3:3986353-3986372 | None:intergenic | 35.0% | |
! | ATAAGAGGCAGTCCTTTTAT+TGG | + | chr2_3:3986352-3986371 | Msa0272450:intron | 35.0% |
!! | CAGTGTTTAGTCTTATCAAC+TGG | - | chr2_3:3986514-3986533 | None:intergenic | 35.0% |
!! | CAGTTGATAAGACTAAACAC+TGG | + | chr2_3:3986512-3986531 | Msa0272450:CDS | 35.0% |
! | GTTGATAAGACTAAACACTG+GGG | + | chr2_3:3986514-3986533 | Msa0272450:CDS | 35.0% |
!! | AGTCTGTTGATAGTCTATCA+AGG | + | chr2_3:3986632-3986651 | Msa0272450:CDS | 35.0% |
! | TGTAATGTAGGTTTGAAGTG+TGG | + | chr2_3:3986690-3986709 | Msa0272450:intron | 35.0% |
AAACTAGCAAAATCAAGGTG+AGG | - | chr2_3:3986757-3986776 | None:intergenic | 35.0% | |
AGATAGATGTGGTGCTTATT+AGG | + | chr2_3:3986994-3987013 | Msa0272450:intron | 35.0% | |
TGCTTATTAGGTTAGGTACT+TGG | + | chr2_3:3987006-3987025 | Msa0272450:intron | 35.0% | |
TTAGGGTCTGTTAGGTTTAA+TGG | + | chr2_3:3987073-3987092 | Msa0272450:intron | 35.0% | |
! | TGTTAGGTTTAATGGATGAG+AGG | + | chr2_3:3987081-3987100 | Msa0272450:intron | 35.0% |
! | GTTAGGTTTAATGGATGAGA+GGG | + | chr2_3:3987082-3987101 | Msa0272450:intron | 35.0% |
TGACAGTAAATAACTGTACG+GGG | - | chr2_3:3987368-3987387 | None:intergenic | 35.0% | |
CAAAATGACACAGGAAAAAG+AGG | - | chr2_3:3987409-3987428 | None:intergenic | 35.0% | |
TCAAGCACCTTCATAGATAA+CGG | - | chr2_3:3987600-3987619 | None:intergenic | 35.0% | |
AAATTTACATACGTGTGTCC+GGG | - | chr2_3:3987663-3987682 | None:intergenic | 35.0% | |
ATAACTACAGAGAGGAGAAA+AGG | - | chr2_3:3987764-3987783 | None:intergenic | 35.0% | |
AGGTCAAAAGTCAGATAAAG+TGG | + | chr2_3:3987941-3987960 | Msa0272450:CDS | 35.0% | |
AGAAAGATGCAAGAAAAGGA+CGG | + | chr2_3:3988294-3988313 | Msa0272450:CDS | 35.0% | |
CGAGGGTTTAAGAGAAATTG+AGG | - | chr2_3:3981240-3981259 | None:intergenic | 40.0% | |
AGGTTATGCGATAGTAACAG+AGG | - | chr2_3:3981345-3981364 | None:intergenic | 40.0% | |
! | TTTTCAGAATGGATCTCCAC+AGG | - | chr2_3:3982139-3982158 | None:intergenic | 40.0% |
ATTCCTACCTCAACAACATC+AGG | - | chr2_3:3982229-3982248 | None:intergenic | 40.0% | |
! | CATAATGGCCTTGAAAGAAG+GGG | - | chr2_3:3982290-3982309 | None:intergenic | 40.0% |
! | GCATAATGGCCTTGAAAGAA+GGG | - | chr2_3:3982291-3982310 | None:intergenic | 40.0% |
! | TGCATAATGGCCTTGAAAGA+AGG | - | chr2_3:3982292-3982311 | None:intergenic | 40.0% |
TGTATGTATGTGGTTCTTGC+AGG | + | chr2_3:3982575-3982594 | Msa0272450:intron | 40.0% | |
GTATGTATGTGGTTCTTGCA+GGG | + | chr2_3:3982576-3982595 | Msa0272450:intron | 40.0% | |
TATGTATGTGGTTCTTGCAG+GGG | + | chr2_3:3982577-3982596 | Msa0272450:intron | 40.0% | |
ACTGGTAGGTGTTTGGAAAT+GGG | + | chr2_3:3982627-3982646 | Msa0272450:intron | 40.0% | |
GATGGATGAAACAGTGGTTA+TGG | + | chr2_3:3982980-3982999 | Msa0272450:intron | 40.0% | |
! | CATTCCCTTTTCCCACAATT+TGG | - | chr2_3:3983041-3983060 | None:intergenic | 40.0% |
ATTGTGGGAAAAGGGAATGT+TGG | + | chr2_3:3983042-3983061 | Msa0272450:intron | 40.0% | |
GCGACTATGTTTAACTCACT+AGG | - | chr2_3:3983123-3983142 | None:intergenic | 40.0% | |
!!! | CCACGTAGTTTTAGAAGTCA+GGG | - | chr2_3:3983150-3983169 | None:intergenic | 40.0% |
!!! | ACCACGTAGTTTTAGAAGTC+AGG | - | chr2_3:3983151-3983170 | None:intergenic | 40.0% |
TTGTTTGAACAAACCTCGTG+AGG | + | chr2_3:3983171-3983190 | Msa0272450:intron | 40.0% | |
TGTTTGAACAAACCTCGTGA+GGG | + | chr2_3:3983172-3983191 | Msa0272450:intron | 40.0% | |
! | GTGACCGTGAAAATGGATTT+AGG | + | chr2_3:3983265-3983284 | Msa0272450:intron | 40.0% |
GATTCGTCATTGATAGAGAG+AGG | + | chr2_3:3983287-3983306 | Msa0272450:intron | 40.0% | |
TTAGGTTTACAAGCGGATCT+TGG | + | chr2_3:3983312-3983331 | Msa0272450:intron | 40.0% | |
ACCGAACCTGAAAATAAACG+AGG | + | chr2_3:3983359-3983378 | Msa0272450:intron | 40.0% | |
!!! | TTCAGTTTTTTGTTGTGGGC+AGG | + | chr2_3:3983397-3983416 | Msa0272450:intron | 40.0% |
GAGCATTAAGCACAATGGAA+AGG | - | chr2_3:3983523-3983542 | None:intergenic | 40.0% | |
TTCCATTGTGCTTAATGCTC+AGG | + | chr2_3:3983523-3983542 | Msa0272450:intron | 40.0% | |
!!! | AGCTGTGTTATTGTTTTGGC+AGG | + | chr2_3:3983647-3983666 | Msa0272450:intron | 40.0% |
!!! | GCTGTGTTATTGTTTTGGCA+GGG | + | chr2_3:3983648-3983667 | Msa0272450:intron | 40.0% |
!!! | CTGTGTTATTGTTTTGGCAG+GGG | + | chr2_3:3983649-3983668 | Msa0272450:intron | 40.0% |
GCAGTAGAATAAGCATCTGA+TGG | - | chr2_3:3983892-3983911 | None:intergenic | 40.0% | |
TAAATAGGTAGCTGGGAAGT+TGG | + | chr2_3:3983979-3983998 | Msa0272450:intron | 40.0% | |
AAATTCAACAGAGGGACACA+AGG | - | chr2_3:3984170-3984189 | None:intergenic | 40.0% | |
GCAGGCTTATATTGAGAAAG+AGG | + | chr2_3:3984316-3984335 | Msa0272450:intron | 40.0% | |
GGAACGTATGCAACCAAAAA+TGG | + | chr2_3:3984367-3984386 | Msa0272450:CDS | 40.0% | |
!! | ATGTCAGCTTTGGCTTTGTT+TGG | - | chr2_3:3984568-3984587 | None:intergenic | 40.0% |
! | GTAGTGTTAGGCTAGTTCTT+AGG | + | chr2_3:3984724-3984743 | Msa0272450:intron | 40.0% |
GTTCCACTCAAATCAATCGT+TGG | - | chr2_3:3984812-3984831 | None:intergenic | 40.0% | |
! | TCTATGTTTTTCCCATCAGG+TGG | - | chr2_3:3985028-3985047 | None:intergenic | 40.0% |
AGACACAAAATGGAGAAGGA+GGG | - | chr2_3:3985317-3985336 | None:intergenic | 40.0% | |
AAGACACAAAATGGAGAAGG+AGG | - | chr2_3:3985213-3985232 | None:intergenic | 40.0% | |
CAAGAGAGAGAGACACAAAA+TGG | + | chr2_3:3985307-3985326 | Msa0272450:intron | 40.0% | |
AGAGAGACACAAAATGGAGA+AGG | + | chr2_3:3985313-3985332 | Msa0272450:intron | 40.0% | |
GAGAAGGAGAGAATGAGATA+AGG | + | chr2_3:3985329-3985348 | Msa0272450:intron | 40.0% | |
CTAACGCTCAACTAGATCAA+TGG | - | chr2_3:3985428-3985447 | None:intergenic | 40.0% | |
TGAAAACTTGTGAATGTGCC+TGG | - | chr2_3:3985455-3985474 | None:intergenic | 40.0% | |
AAGTCGTGTGATAACATACC+AGG | - | chr2_3:3985579-3985598 | None:intergenic | 40.0% | |
! | AGAAAGTATACTTCGTCGAC+AGG | - | chr2_3:3985847-3985866 | None:intergenic | 40.0% |
ACAAGATCAGCCTAACTATG+AGG | + | chr2_3:3985977-3985996 | Msa0272450:CDS | 40.0% | |
!! | TGATTACTCTTTTGGTGTGG+CGG | + | chr2_3:3986300-3986319 | Msa0272450:intron | 40.0% |
CTCTTATGGGTGAAAAGAGA+AGG | - | chr2_3:3986339-3986358 | None:intergenic | 40.0% | |
! | CTTCTCTTTTCACCCATAAG+AGG | + | chr2_3:3986337-3986356 | Msa0272450:intron | 40.0% |
GAAGAGGAGGAATTTGAAGA+TGG | + | chr2_3:3986604-3986623 | Msa0272450:CDS | 40.0% | |
! | ATGTAGGTTTGAAGTGTGGT+TGG | + | chr2_3:3986694-3986713 | Msa0272450:intron | 40.0% |
! | AGAACACCCACACTTTCTTT+TGG | - | chr2_3:3986728-3986747 | None:intergenic | 40.0% |
GATGTGGTGCTTATTAGGTT+AGG | + | chr2_3:3986999-3987018 | Msa0272450:intron | 40.0% | |
AAACCTAACAGACCCTAAGT+GGG | - | chr2_3:3987071-3987090 | None:intergenic | 40.0% | |
TAAACCTAACAGACCCTAAG+TGG | - | chr2_3:3987072-3987091 | None:intergenic | 40.0% | |
! | GTTTAATGGATGAGAGGGAA+GGG | + | chr2_3:3987087-3987106 | Msa0272450:intron | 40.0% |
! | TGAGAGGGAAGGGATTTTAA+TGG | + | chr2_3:3987097-3987116 | Msa0272450:intron | 40.0% |
!! | AGGGAAGGGATTTTAATGGA+AGG | + | chr2_3:3987101-3987120 | Msa0272450:intron | 40.0% |
!! | GGGAAGGGATTTTAATGGAA+GGG | + | chr2_3:3987102-3987121 | Msa0272450:intron | 40.0% |
!! | AAGGGATTTTAATGGAAGGG+AGG | + | chr2_3:3987105-3987124 | Msa0272450:intron | 40.0% |
!! | AGGGATTTTAATGGAAGGGA+GGG | + | chr2_3:3987106-3987125 | Msa0272450:intron | 40.0% |
! | ATACCGTGTTTGGTTCAACA+TGG | + | chr2_3:3987143-3987162 | Msa0272450:intron | 40.0% |
! | TACCGTGTTTGGTTCAACAT+GGG | + | chr2_3:3987144-3987163 | Msa0272450:intron | 40.0% |
AAAAAAGTGGGGGACTTAGA+GGG | - | chr2_3:3987279-3987298 | None:intergenic | 40.0% | |
!!! | TTTTTTTAGAGGGAAGGGGA+GGG | - | chr2_3:3987311-3987330 | None:intergenic | 40.0% |
!!! | TTTTTTTTAGAGGGAAGGGG+AGG | - | chr2_3:3987312-3987331 | None:intergenic | 40.0% |
AGTAAATAACTGTACGGGGA+TGG | - | chr2_3:3987364-3987383 | None:intergenic | 40.0% | |
TGACACAGGAAAAAGAGGTA+AGG | - | chr2_3:3987404-3987423 | None:intergenic | 40.0% | |
CACCTGATGTTATTGACCTA+CGG | + | chr2_3:3987454-3987473 | Msa0272450:CDS | 40.0% | |
TTCCGTAGGTCAATAACATC+AGG | - | chr2_3:3987459-3987478 | None:intergenic | 40.0% | |
! | TATTTCTCTGTTGCTTCCGT+AGG | - | chr2_3:3987473-3987492 | None:intergenic | 40.0% |
ACGGAAGCAACAGAGAAATA+AGG | + | chr2_3:3987473-3987492 | Msa0272450:CDS | 40.0% | |
ACTTGATAAAGAGGCTTCTC+AGG | - | chr2_3:3987501-3987520 | None:intergenic | 40.0% | |
TTCTCCTCTCTGTAGTTATG+TGG | + | chr2_3:3987765-3987784 | Msa0272450:intron | 40.0% | |
TTTAGCACCCGATTTATCCT+GGG | - | chr2_3:3987803-3987822 | None:intergenic | 40.0% | |
! | TTTTAGCACCCGATTTATCC+TGG | - | chr2_3:3987804-3987823 | None:intergenic | 40.0% |
AGGATAAATCGGGTGCTAAA+AGG | + | chr2_3:3987803-3987822 | Msa0272450:CDS | 40.0% | |
GGATAAATCGGGTGCTAAAA+GGG | + | chr2_3:3987804-3987823 | Msa0272450:CDS | 40.0% | |
!! | TTCCAGGTCGATTTGCTTAA+AGG | + | chr2_3:3987921-3987940 | Msa0272450:intron | 40.0% |
TCTTACCTCTGGATTTATGC+AGG | + | chr2_3:3988084-3988103 | Msa0272450:intron | 40.0% | |
TCATACCTGCATAAATCCAG+AGG | - | chr2_3:3988092-3988111 | None:intergenic | 40.0% | |
TCTGGATTTATGCAGGTATG+AGG | + | chr2_3:3988091-3988110 | Msa0272450:intron | 40.0% | |
GCAGTCCCATATGATTAGTA+GGG | - | chr2_3:3988192-3988211 | None:intergenic | 40.0% | |
TGCAGTCCCATATGATTAGT+AGG | - | chr2_3:3988193-3988212 | None:intergenic | 40.0% | |
TTCTCTTAAACCCTCGACGA+TGG | + | chr2_3:3981244-3981263 | Msa0272450:exon | 45.0% | |
TTACCAAAACGGAGTCGTTG+CGG | + | chr2_3:3981283-3981302 | Msa0272450:CDS | 45.0% | |
CCTTCAAAGTCTACCTTCTC+TGG | - | chr2_3:3981765-3981784 | None:intergenic | 45.0% | |
CCAGAGAAGGTAGACTTTGA+AGG | + | chr2_3:3981762-3981781 | Msa0272450:CDS | 45.0% | |
! | GAAGGTAGACTTTGAAGGCA+TGG | + | chr2_3:3981767-3981786 | Msa0272450:CDS | 45.0% |
CTCAAGACCTGATGTTGTTG+AGG | + | chr2_3:3982219-3982238 | Msa0272450:CDS | 45.0% | |
AGACCTGATGTTGTTGAGGT+AGG | + | chr2_3:3982223-3982242 | Msa0272450:intron | 45.0% | |
TTGGGTATCCCCTTCTTTCA+AGG | + | chr2_3:3982279-3982298 | Msa0272450:intron | 45.0% | |
! | CTTTTCTGTGACCAATGCCT+AGG | - | chr2_3:3982414-3982433 | None:intergenic | 45.0% |
GACTGGTAGGTGTTTGGAAA+TGG | + | chr2_3:3982626-3982645 | Msa0272450:intron | 45.0% | |
TTTGGCGATGGATGAAACAG+TGG | + | chr2_3:3982974-3982993 | Msa0272450:intron | 45.0% | |
!! | CCCTGACTTCTAAAACTACG+TGG | + | chr2_3:3983147-3983166 | Msa0272450:intron | 45.0% |
AGCCTGAGCATTAAGCACAA+TGG | - | chr2_3:3983528-3983547 | None:intergenic | 45.0% | |
!! | ATCTGAAGTGTTGTGCATGC+AGG | + | chr2_3:3984298-3984317 | Msa0272450:intron | 45.0% |
TTCGTGATACAACTCCCCAA+GGG | - | chr2_3:3984591-3984610 | None:intergenic | 45.0% | |
TTTGTTTCCCACCACCTGAT+GGG | + | chr2_3:3985014-3985033 | Msa0272450:intron | 45.0% | |
! | TGTTTTTCCCATCAGGTGGT+GGG | - | chr2_3:3985024-3985043 | None:intergenic | 45.0% |
! | ATGTTTTTCCCATCAGGTGG+TGG | - | chr2_3:3985025-3985044 | None:intergenic | 45.0% |
GAGAAGAAGAGAATGGGAGA+AGG | - | chr2_3:3985190-3985209 | None:intergenic | 45.0% | |
AGGAGGGAGAAGAAGAGAAT+GGG | - | chr2_3:3985196-3985215 | None:intergenic | 45.0% | |
AAGGAGGGAGAAGAAGAGAA+TGG | - | chr2_3:3985197-3985216 | None:intergenic | 45.0% | |
GGAGAGAATGAGATAAGGAG+AGG | + | chr2_3:3985334-3985353 | Msa0272450:intron | 45.0% | |
TAGTTGAGCGTTAGTGATCC+AGG | + | chr2_3:3985434-3985453 | Msa0272450:intron | 45.0% | |
TTGGTGTGCAGGTAAAGTTG+AGG | + | chr2_3:3985544-3985563 | Msa0272450:intron | 45.0% | |
TGGTGTGCAGGTAAAGTTGA+GGG | + | chr2_3:3985545-3985564 | Msa0272450:intron | 45.0% | |
AAGTTGAGGGAGATGAAACC+TGG | + | chr2_3:3985558-3985577 | Msa0272450:CDS | 45.0% | |
CACGACTTGAAAGAAGCTCT+TGG | + | chr2_3:3985591-3985610 | Msa0272450:CDS | 45.0% | |
ATCTTCAGCTGAGGGTAAGA+TGG | - | chr2_3:3985754-3985773 | None:intergenic | 45.0% | |
ATAACCAAAGCTAGCTCCAG+CGG | - | chr2_3:3985800-3985819 | None:intergenic | 45.0% | |
!! | GCTAGCTTTGGTTATCATCC+TGG | + | chr2_3:3985805-3985824 | Msa0272450:CDS | 45.0% |
! | AGCTTTGGTTATCATCCTGG+TGG | + | chr2_3:3985808-3985827 | Msa0272450:CDS | 45.0% |
TTGGTTATCATCCTGGTGGA+TGG | + | chr2_3:3985812-3985831 | Msa0272450:CDS | 45.0% | |
! | TGGTTATCATCCTGGTGGAT+GGG | + | chr2_3:3985813-3985832 | Msa0272450:CDS | 45.0% |
AAGTATACTTCGTCGACAGG+AGG | - | chr2_3:3985844-3985863 | None:intergenic | 45.0% | |
GACTAAACACTGGGGTGATT+TGG | + | chr2_3:3986522-3986541 | Msa0272450:CDS | 45.0% | |
! | TAAACACTGGGGTGATTTGG+AGG | + | chr2_3:3986525-3986544 | Msa0272450:CDS | 45.0% |
GGAAGAAGAGGAAGAAGAAG+AGG | + | chr2_3:3986558-3986577 | Msa0272450:CDS | 45.0% | |
AGAAGAGGAAGAAGAAGAGG+AGG | + | chr2_3:3986561-3986580 | Msa0272450:CDS | 45.0% | |
GGAAGAAGAAGGAATGGAAG+AGG | + | chr2_3:3986588-3986607 | Msa0272450:CDS | 45.0% | |
AGAAGAAGGAATGGAAGAGG+AGG | + | chr2_3:3986591-3986610 | Msa0272450:CDS | 45.0% | |
! | GGTACTGGGTTAGATAGATG+TGG | + | chr2_3:3986983-3987002 | Msa0272450:intron | 45.0% |
! | GGTTTAATGGATGAGAGGGA+AGG | + | chr2_3:3987086-3987105 | Msa0272450:intron | 45.0% |
!! | GGGATTTTAATGGAAGGGAG+GGG | + | chr2_3:3987107-3987126 | Msa0272450:intron | 45.0% |
!! | GGATTTTAATGGAAGGGAGG+GGG | + | chr2_3:3987108-3987127 | Msa0272450:intron | 45.0% |
!! | GATTTTAATGGAAGGGAGGG+GGG | + | chr2_3:3987109-3987128 | Msa0272450:intron | 45.0% |
CTCCCATGTTGAACCAAACA+CGG | - | chr2_3:3987149-3987168 | None:intergenic | 45.0% | |
! | GTGTTTGGTTCAACATGGGA+GGG | + | chr2_3:3987148-3987167 | Msa0272450:intron | 45.0% |
! | TGTTTGGTTCAACATGGGAG+GGG | + | chr2_3:3987149-3987168 | Msa0272450:intron | 45.0% |
TCAACATGGGAGGGGTTTAA+TGG | + | chr2_3:3987157-3987176 | Msa0272450:intron | 45.0% | |
AAAAAGTGGGGGACTTAGAG+GGG | - | chr2_3:3987278-3987297 | None:intergenic | 45.0% | |
CAAAAAAGTGGGGGACTTAG+AGG | - | chr2_3:3987280-3987299 | None:intergenic | 45.0% | |
GCAAGAGAGCAAAAAAGTGG+GGG | - | chr2_3:3987289-3987308 | None:intergenic | 45.0% | |
GGCAAGAGAGCAAAAAAGTG+GGG | - | chr2_3:3987290-3987309 | None:intergenic | 45.0% | |
GGGCAAGAGAGCAAAAAAGT+GGG | - | chr2_3:3987291-3987310 | None:intergenic | 45.0% | |
AGGGCAAGAGAGCAAAAAAG+TGG | - | chr2_3:3987292-3987311 | None:intergenic | 45.0% | |
! | AGTGCTGAGCAAAATGACAC+AGG | - | chr2_3:3987418-3987437 | None:intergenic | 45.0% |
! | ATTTTGCTCAGCACTCCTAC+TGG | + | chr2_3:3987423-3987442 | Msa0272450:intron | 45.0% |
GCAGGATCTTTACTTGTACC+CGG | + | chr2_3:3987642-3987661 | Msa0272450:CDS | 45.0% | |
CCAACCACATAACTACAGAG+AGG | - | chr2_3:3987772-3987791 | None:intergenic | 45.0% | |
CCTCTCTGTAGTTATGTGGT+TGG | + | chr2_3:3987769-3987788 | Msa0272450:intron | 45.0% | |
TGTAGTTATGTGGTTGGCAC+TGG | + | chr2_3:3987775-3987794 | Msa0272450:intron | 45.0% | |
GACCTTTAAGCAAATCGACC+TGG | - | chr2_3:3987926-3987945 | None:intergenic | 45.0% | |
TATGCAGGTATGAGGAAGCT+AGG | + | chr2_3:3988099-3988118 | Msa0272450:intron | 45.0% | |
ATGCAGGTATGAGGAAGCTA+GGG | + | chr2_3:3988100-3988119 | Msa0272450:intron | 45.0% | |
GCGAGAAGATTTCAGTGACA+TGG | + | chr2_3:3988145-3988164 | Msa0272450:CDS | 45.0% | |
TTTCAGTGACATGGTTGCAG+AGG | + | chr2_3:3988154-3988173 | Msa0272450:CDS | 45.0% | |
TAGCTATAACTGTTTCGGGC+AGG | + | chr2_3:3988437-3988456 | Msa0272450:three_prime_UTR | 45.0% | |
!! | AAAAAAAAAAAATCAATTAA+GGG | - | chr2_3:3981854-3981873 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAATCAATTA+AGG | - | chr2_3:3981855-3981874 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTTATAGAA+TGG | + | chr2_3:3982923-3982942 | Msa0272450:intron | 5.0% |
!!! | TTATTTTACTTATATATTAT+TGG | + | chr2_3:3985492-3985511 | Msa0272450:intron | 5.0% |
TTTCCTTGATGTGAAGGCGG+TGG | + | chr2_3:3981149-3981168 | Msa0272450:five_prime_UTR | 50.0% | |
AATCCACCGCCTTCACATCA+AGG | - | chr2_3:3981155-3981174 | None:intergenic | 50.0% | |
!! | GCAACGACTCCGTTTTGGTA+AGG | - | chr2_3:3981284-3981303 | None:intergenic | 50.0% |
GGAGAATACTGATCCGAAGC+AGG | + | chr2_3:3981304-3981323 | Msa0272450:CDS | 50.0% | |
TGATAAGAAGGATGAGGCGG+AGG | + | chr2_3:3981947-3981966 | Msa0272450:CDS | 50.0% | |
TGCAGCAGATCCTAAGTTGC+TGG | + | chr2_3:3982353-3982372 | Msa0272450:CDS | 50.0% | |
GGAACACTGTACCTGTACCT+AGG | + | chr2_3:3982394-3982413 | Msa0272450:CDS | 50.0% | |
CTGTACCTGTACCTAGGCAT+TGG | + | chr2_3:3982400-3982419 | Msa0272450:CDS | 50.0% | |
TGTGACCAATGCCTAGGTAC+AGG | - | chr2_3:3982408-3982427 | None:intergenic | 50.0% | |
!! | ATCACCAATCCTGGACTGGT+AGG | + | chr2_3:3982613-3982632 | Msa0272450:intron | 50.0% |
AACACCTACCAGTCCAGGAT+TGG | - | chr2_3:3982620-3982639 | None:intergenic | 50.0% | |
!! | ATCCTGGACTGGTAGGTGTT+TGG | + | chr2_3:3982620-3982639 | Msa0272450:intron | 50.0% |
TTCCAAACACCTACCAGTCC+AGG | - | chr2_3:3982625-3982644 | None:intergenic | 50.0% | |
TCGTGAGGGAGAAGTAGCTT+GGG | + | chr2_3:3983186-3983205 | Msa0272450:intron | 50.0% | |
ACAGACCGTGACCGTGAAAA+TGG | + | chr2_3:3983258-3983277 | Msa0272450:intron | 50.0% | |
TTGTTGTGGGCAGGCCTAAT+TGG | + | chr2_3:3983406-3983425 | Msa0272450:intron | 50.0% | |
TGTTGTGGGCAGGCCTAATT+GGG | + | chr2_3:3983407-3983426 | Msa0272450:intron | 50.0% | |
!!! | TTGTTTTGGCAGGGGAAACG+AGG | + | chr2_3:3983657-3983676 | Msa0272450:intron | 50.0% |
CCAGTGGCAGCAATGAAATC+AGG | - | chr2_3:3983708-3983727 | None:intergenic | 50.0% | |
CCTGATTTCATTGCTGCCAC+TGG | + | chr2_3:3983705-3983724 | Msa0272450:CDS | 50.0% | |
!!! | TTTTGGGATGGATGGGTTGC+TGG | + | chr2_3:3984025-3984044 | Msa0272450:intron | 50.0% |
AAGCCAAAGCTGACATCCCT+TGG | + | chr2_3:3984572-3984591 | Msa0272450:CDS | 50.0% | |
AGCCAAAGCTGACATCCCTT+GGG | + | chr2_3:3984573-3984592 | Msa0272450:CDS | 50.0% | |
CTTCGTGATACAACTCCCCA+AGG | - | chr2_3:3984592-3984611 | None:intergenic | 50.0% | |
CTTGGGGAGTTGTATCACGA+AGG | + | chr2_3:3984590-3984609 | Msa0272450:CDS | 50.0% | |
!! | GGCCCAACGATTGATTTGAG+TGG | + | chr2_3:3984806-3984825 | Msa0272450:intron | 50.0% |
GTTTGTTTCCCACCACCTGA+TGG | + | chr2_3:3985013-3985032 | Msa0272450:intron | 50.0% | |
GAAGAGAATGGGAGAAGGAG+AGG | - | chr2_3:3985185-3985204 | None:intergenic | 50.0% | |
CTTTCGTCAAAAGAGGGGCT+TGG | - | chr2_3:3985362-3985381 | None:intergenic | 50.0% | |
! | GATGACATTGGTTGGTGTGC+AGG | + | chr2_3:3985533-3985552 | Msa0272450:intron | 50.0% |
AGAAGCTCTTGGTATGCCTG+AGG | + | chr2_3:3985602-3985621 | Msa0272450:CDS | 50.0% | |
GAAGCTCTTGGTATGCCTGA+GGG | + | chr2_3:3985603-3985622 | Msa0272450:CDS | 50.0% | |
TGGTGGAGGACCATATCTCT+GGG | - | chr2_3:3985734-3985753 | None:intergenic | 50.0% | |
! | ATGGTGGAGGACCATATCTC+TGG | - | chr2_3:3985735-3985754 | None:intergenic | 50.0% |
TTCAGCTGAGGGTAAGATGG+TGG | - | chr2_3:3985751-3985770 | None:intergenic | 50.0% | |
!! | GTATGGGAGCATTCAGTCCT+GGG | - | chr2_3:3985777-3985796 | None:intergenic | 50.0% |
TAACCAAAGCTAGCTCCAGC+GGG | - | chr2_3:3985799-3985818 | None:intergenic | 50.0% | |
! | GGTTATCATCCTGGTGGATG+GGG | + | chr2_3:3985814-3985833 | Msa0272450:CDS | 50.0% |
CAGTATGGACGCCCACTATA+TGG | + | chr2_3:3985936-3985955 | Msa0272450:intron | 50.0% | |
TGCTGGTGTCCTCATTATGC+AGG | + | chr2_3:3986483-3986502 | Msa0272450:intron | 50.0% | |
! | CTGGCTCTTCCTGCATAATG+AGG | - | chr2_3:3986495-3986514 | None:intergenic | 50.0% |
AGAGGAAGAAGAAGAGGAGG+AGG | + | chr2_3:3986564-3986583 | Msa0272450:CDS | 50.0% | |
GGAGGAGGAAGAAGAAGGAA+TGG | + | chr2_3:3986582-3986601 | Msa0272450:CDS | 50.0% | |
TGGATATGCAGGTCCCACTT+AGG | + | chr2_3:3987055-3987074 | Msa0272450:intron | 50.0% | |
GGATATGCAGGTCCCACTTA+GGG | + | chr2_3:3987056-3987075 | Msa0272450:intron | 50.0% | |
! | CGTGTTTGGTTCAACATGGG+AGG | + | chr2_3:3987147-3987166 | Msa0272450:intron | 50.0% |
CACTGGCACCCAGGATAAAT+CGG | + | chr2_3:3987792-3987811 | Msa0272450:CDS | 50.0% | |
ACTGGCACCCAGGATAAATC+GGG | + | chr2_3:3987793-3987812 | Msa0272450:CDS | 50.0% | |
! | AGTGGACGTCACTTTACTGC+CGG | + | chr2_3:3987959-3987978 | Msa0272450:CDS | 50.0% |
CACTTTACTGCCGGAAGAGT+TGG | + | chr2_3:3987968-3987987 | Msa0272450:CDS | 50.0% | |
TCCATGGCTTCCAACTCTTC+CGG | - | chr2_3:3987981-3988000 | None:intergenic | 50.0% | |
! | GGCAGGCAGAACATTTTCCA+TGG | - | chr2_3:3987997-3988016 | None:intergenic | 50.0% |
TAAACCCTCGACGATGGCTG+CGG | + | chr2_3:3981250-3981269 | Msa0272450:exon | 55.0% | |
! | TCTCCGCAACGACTCCGTTT+TGG | - | chr2_3:3981289-3981308 | None:intergenic | 55.0% |
ATGTGGTTCTTGCAGGGGAG+CGG | + | chr2_3:3982582-3982601 | Msa0272450:intron | 55.0% | |
GCTGTGGCAATCACCAATCC+TGG | + | chr2_3:3982604-3982623 | Msa0272450:CDS | 55.0% | |
GGCAATCACCAATCCTGGAC+TGG | + | chr2_3:3982609-3982628 | Msa0272450:CDS | 55.0% | |
CAAGCTACTTCTCCCTCACG+AGG | - | chr2_3:3983187-3983206 | None:intergenic | 55.0% | |
CTCGTGAGGGAGAAGTAGCT+TGG | + | chr2_3:3983185-3983204 | Msa0272450:intron | 55.0% | |
GTTGTGGGCAGGCCTAATTG+GGG | + | chr2_3:3983408-3983427 | Msa0272450:intron | 55.0% | |
GCCAAAGCTGACATCCCTTG+GGG | + | chr2_3:3984574-3984593 | Msa0272450:CDS | 55.0% | |
TCCCCAAGGGATGTCAGCTT+TGG | - | chr2_3:3984578-3984597 | None:intergenic | 55.0% | |
GGTGGAGGACCATATCTCTG+GGG | - | chr2_3:3985733-3985752 | None:intergenic | 55.0% | |
! | AGCTGAGGGTAAGATGGTGG+AGG | - | chr2_3:3985748-3985767 | None:intergenic | 55.0% |
TACCCTCAGCTGAAGATCCC+AGG | + | chr2_3:3985757-3985776 | Msa0272450:CDS | 55.0% | |
GTCCTGGGATCTTCAGCTGA+GGG | - | chr2_3:3985762-3985781 | None:intergenic | 55.0% | |
AGTCCTGGGATCTTCAGCTG+AGG | - | chr2_3:3985763-3985782 | None:intergenic | 55.0% | |
!! | GGTATGGGAGCATTCAGTCC+TGG | - | chr2_3:3985778-3985797 | None:intergenic | 55.0% |
AAGCTAGCTCCAGCGGGTAT+GGG | - | chr2_3:3985793-3985812 | None:intergenic | 55.0% | |
AAAGCTAGCTCCAGCGGGTA+TGG | - | chr2_3:3985794-3985813 | None:intergenic | 55.0% | |
! | ATACCCGCTGGAGCTAGCTT+TGG | + | chr2_3:3985793-3985812 | Msa0272450:CDS | 55.0% |
! | ACACTGGGGTGATTTGGAGG+AGG | + | chr2_3:3986528-3986547 | Msa0272450:CDS | 55.0% |
! | TGATTTGGAGGAGGAGGAGG+AGG | + | chr2_3:3986537-3986556 | Msa0272450:CDS | 55.0% |
GGAAGAAGAAGAGGAGGAGG+AGG | + | chr2_3:3986567-3986586 | Msa0272450:CDS | 55.0% | |
GAGGAGGAGGAGGAAGAAGA+AGG | + | chr2_3:3986547-3986566 | Msa0272450:CDS | 55.0% | |
GGTCCCACTTAGGGTCTGTT+AGG | + | chr2_3:3987065-3987084 | Msa0272450:intron | 55.0% | |
TCAGGTGTCTCCACTCCAGT+AGG | - | chr2_3:3987441-3987460 | None:intergenic | 55.0% | |
CAGGTATGAGGAAGCTAGGG+AGG | + | chr2_3:3988103-3988122 | Msa0272450:intron | 55.0% | |
GGACGGCAAGTCGAAGAAGA+AGG | + | chr2_3:3988311-3988330 | Msa0272450:CDS | 55.0% | |
GTTACCGCAGCCATCGTCGA+GGG | - | chr2_3:3981257-3981276 | None:intergenic | 60.0% | |
TGTTACCGCAGCCATCGTCG+AGG | - | chr2_3:3981258-3981277 | None:intergenic | 60.0% | |
CGCGAGATTTGCGACTCCTG+AGG | + | chr2_3:3983234-3983253 | Msa0272450:intron | 60.0% | |
ACGGTCACGGTCTGTTCCTC+AGG | - | chr2_3:3983253-3983272 | None:intergenic | 60.0% | |
CTGAATGCTCCCATACCCGC+TGG | + | chr2_3:3985781-3985800 | Msa0272450:CDS | 60.0% | |
! | CTGGGGTGATTTGGAGGAGG+AGG | + | chr2_3:3986531-3986550 | Msa0272450:CDS | 60.0% |
! | GGGTGATTTGGAGGAGGAGG+AGG | + | chr2_3:3986534-3986553 | Msa0272450:CDS | 60.0% |
GGAGGAGGAGGAGGAAGAAG+AGG | + | chr2_3:3986546-3986565 | Msa0272450:CDS | 60.0% | |
GCTCAGCACTCCTACTGGAG+TGG | + | chr2_3:3987428-3987447 | Msa0272450:intron | 60.0% | |
GCCGGAAGAGTTGGAAGCCA+TGG | + | chr2_3:3987977-3987996 | Msa0272450:CDS | 60.0% | |
TTCTTGCAGGGGAGCGGCTG+TGG | + | chr2_3:3982588-3982607 | Msa0272450:intron | 65.0% | |
!! | CATGGAGGAGGAGCACCCTC+AGG | - | chr2_3:3985621-3985640 | None:intergenic | 65.0% |
!! | CTGAGGGTGCTCCTCCTCCA+TGG | + | chr2_3:3985619-3985638 | Msa0272450:CDS | 65.0% |
!! | TGTGGTTGGCACTGGCACCC+AGG | + | chr2_3:3987783-3987802 | Msa0272450:CDS | 65.0% |
GGAGGCTTGCCCCATCCACC+AGG | - | chr2_3:3985826-3985845 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 3981148 | 3988465 | 3981148 | ID=Msa0272450;Name=Msa0272450 |
chr2_3 | mRNA | 3981148 | 3988465 | 3981148 | ID=Msa0272450-mRNA-1;Parent=Msa0272450;Name=Msa0272450-mRNA-1;_AED=0.16;_eAED=0.16;_QI=115|0.94|0.94|1|1|1|19|118|531 |
chr2_3 | exon | 3981148 | 3981325 | 3981148 | ID=Msa0272450-mRNA-1:exon:1957;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3981732 | 3981839 | 3981732 | ID=Msa0272450-mRNA-1:exon:1958;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3981942 | 3982073 | 3981942 | ID=Msa0272450-mRNA-1:exon:1959;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3982178 | 3982240 | 3982178 | ID=Msa0272450-mRNA-1:exon:1960;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3982339 | 3982421 | 3982339 | ID=Msa0272450-mRNA-1:exon:1961;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3982597 | 3982630 | 3982597 | ID=Msa0272450-mRNA-1:exon:1962;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3983669 | 3983746 | 3983669 | ID=Msa0272450-mRNA-1:exon:1963;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3984320 | 3984412 | 3984320 | ID=Msa0272450-mRNA-1:exon:1964;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3984539 | 3984625 | 3984539 | ID=Msa0272450-mRNA-1:exon:1965;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3985555 | 3985656 | 3985555 | ID=Msa0272450-mRNA-1:exon:1966;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3985736 | 3985855 | 3985736 | ID=Msa0272450-mRNA-1:exon:1967;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3985939 | 3985998 | 3985939 | ID=Msa0272450-mRNA-1:exon:1968;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3986505 | 3986653 | 3986505 | ID=Msa0272450-mRNA-1:exon:1969;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3987434 | 3987518 | 3987434 | ID=Msa0272450-mRNA-1:exon:1970;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3987612 | 3987670 | 3987612 | ID=Msa0272450-mRNA-1:exon:1971;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3987780 | 3987825 | 3987780 | ID=Msa0272450-mRNA-1:exon:1972;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3987927 | 3988018 | 3987927 | ID=Msa0272450-mRNA-1:exon:1973;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3988106 | 3988175 | 3988106 | ID=Msa0272450-mRNA-1:exon:1974;Parent=Msa0272450-mRNA-1 |
chr2_3 | exon | 3988276 | 3988465 | 3988276 | ID=Msa0272450-mRNA-1:exon:1975;Parent=Msa0272450-mRNA-1 |
chr2_3 | five_prime_UTR | 3981148 | 3981262 | 3981148 | ID=Msa0272450-mRNA-1:five_prime_utr;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3981263 | 3981325 | 3981263 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3981732 | 3981839 | 3981732 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3981942 | 3982073 | 3981942 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3982178 | 3982240 | 3982178 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3982339 | 3982421 | 3982339 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3982597 | 3982630 | 3982597 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3983669 | 3983746 | 3983669 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3984320 | 3984412 | 3984320 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3984539 | 3984625 | 3984539 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3985555 | 3985656 | 3985555 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3985736 | 3985855 | 3985736 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3985939 | 3985998 | 3985939 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3986505 | 3986653 | 3986505 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3987434 | 3987518 | 3987434 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3987612 | 3987670 | 3987612 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3987780 | 3987825 | 3987780 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3987927 | 3988018 | 3987927 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3988106 | 3988175 | 3988106 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | CDS | 3988276 | 3988347 | 3988276 | ID=Msa0272450-mRNA-1:cds;Parent=Msa0272450-mRNA-1 |
chr2_3 | three_prime_UTR | 3988348 | 3988465 | 3988348 | ID=Msa0272450-mRNA-1:three_prime_utr;Parent=Msa0272450-mRNA-1 |
Gene Sequence |
Protein sequence |