AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046810 MtrunA17_Chr3g0136471 96.367 1734 44 3 1 1719 1 1730 0.0 3449
Msa0046810 MtrunA17_Chr7g0276451 31.945 1609 912 32 40 1511 204 1766 0.0 740
Msa0046810 MtrunA17_Chr4g0065391 31.979 1698 975 43 56 1690 41 1621 0.0 724
Msa0046810 MtrunA17_Chr2g0292651 30.346 1473 852 28 48 1489 13 1342 0.0 613
Msa0046810 MtrunA17_Chr8g0368761 30.878 1480 831 38 58 1490 25 1359 0.0 608
Msa0046810 MtrunA17_Chr1g0179081 30.348 1496 832 34 61 1489 18 1370 0.0 607
Msa0046810 MtrunA17_Chr8g0360081 38.525 244 138 5 1285 1524 9 244 3.65e-38 147
Msa0046810 MtrunA17_Chr3g0130581 37.500 248 147 3 1279 1524 3 244 5.74e-35 137
Msa0046810 MtrunA17_Chr3g0119171 38.976 254 138 8 1285 1533 227 468 7.30e-35 142
Msa0046810 MtrunA17_Chr3g0119181 41.436 181 99 3 1285 1464 69 243 7.88e-32 127
Msa0046810 MtrunA17_Chr3g0119071 32.317 328 186 12 1285 1601 166 468 1.98e-31 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046810 AT3G43920.3 51.457 995 425 13 705 1693 627 1569 0.0 972
Msa0046810 AT3G43920.3 43.229 576 301 6 24 595 16 569 3.02e-131 449
Msa0046810 AT3G43920.4 51.457 995 425 13 705 1693 626 1568 0.0 971
Msa0046810 AT3G43920.4 43.229 576 300 6 24 595 16 568 2.79e-131 449
Msa0046810 AT3G43920.1 51.457 995 425 13 705 1693 588 1530 0.0 971
Msa0046810 AT3G43920.1 40.278 576 279 9 24 595 16 530 3.38e-109 384
Msa0046810 AT3G43920.6 51.457 995 425 13 705 1693 409 1351 0.0 971
Msa0046810 AT3G43920.6 40.169 356 204 2 244 595 1 351 1.37e-67 252
Msa0046810 AT3G43920.2 51.457 995 425 13 705 1693 637 1579 0.0 971
Msa0046810 AT3G43920.2 43.847 577 306 6 24 595 16 579 3.30e-133 454
Msa0046810 AT3G43920.5 51.884 929 389 13 705 1627 627 1503 0.0 920
Msa0046810 AT3G43920.5 43.229 576 301 6 24 595 16 569 9.76e-132 449
Msa0046810 AT1G01040.1 32.214 1757 963 39 58 1686 250 1906 0.0 778
Msa0046810 AT1G01040.2 32.196 1758 963 40 58 1686 250 1907 0.0 774
Msa0046810 AT5G20320.1 30.598 1706 1008 42 43 1688 110 1699 0.0 678
Msa0046810 AT5G20320.2 30.070 1706 1003 43 43 1688 110 1685 0.0 649
Msa0046810 AT3G03300.3 31.933 1500 857 41 58 1529 25 1388 0.0 644
Msa0046810 AT3G03300.1 31.933 1500 857 41 58 1529 25 1388 0.0 644
Msa0046810 AT5G20320.3 30.101 1588 936 40 161 1688 1 1474 0.0 611
Msa0046810 AT3G03300.2 31.250 1440 827 40 118 1529 70 1374 0.0 595
Msa0046810 AT3G03300.4 29.794 1309 762 38 244 1529 1 1175 1.83e-144 478
Msa0046810 AT5G45150.1 28.436 422 243 15 1282 1685 1 381 6.35e-32 136
Msa0046810 AT5G45150.1 28.283 198 130 3 1285 1479 415 603 5.86e-18 91.3
Msa0046810 AT3G20420.1 33.871 248 154 4 1279 1522 51 292 1.11e-31 129
Msa0046810 AT4G15417.1 38.043 184 104 4 1284 1464 28 204 3.86e-28 115
Msa0046810 AT4G15417.2 38.043 184 104 4 1284 1464 53 229 6.05e-28 116
Msa0046810 AT5G45150.2 28.283 198 130 3 1285 1479 219 407 5.80e-18 90.9
Msa0046810 AT5G45150.3 28.283 198 130 3 1285 1479 219 407 5.80e-18 90.9

Find 359 sgRNAs with CRISPR-Local

Find 796 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAATTTATATATAAATT+AGG 0.091925 1_1:+79240851 Msa0046810:three_prime_UTR
TTCACACTCTCCATTAATTT+TGG 0.133467 1_1:-79232583 None:intergenic
TCTCCAACATCAAAATAAAT+TGG 0.183255 1_1:-79233949 None:intergenic
AAGACCATGAATCTAATTTA+AGG 0.187116 1_1:+79234220 Msa0046810:CDS
TGCAGCCGATGAAATGATTT+TGG 0.196692 1_1:+79233089 Msa0046810:intron
ATCAATCAAAATGAATAAAA+AGG 0.208033 1_1:+79240035 Msa0046810:CDS
TTAATAAGTTCAAGTAATTT+TGG 0.208779 1_1:-79233159 None:intergenic
GAGGAATACAATTGCAATTA+TGG 0.216734 1_1:+79228782 Msa0046810:CDS
CATAGGCAGCGATTCAAAAT+TGG 0.223620 1_1:-79234482 None:intergenic
ATTGTTTCTGAAATTTATTC+TGG 0.226086 1_1:+79235009 Msa0046810:CDS
AAATTTATAAGCATGAAATT+TGG 0.232247 1_1:-79234971 None:intergenic
GATAGTTACACACTGAAAAT+TGG 0.243600 1_1:-79232619 None:intergenic
AAGTGTCCTTCATGTTTCTT+AGG 0.261611 1_1:-79236738 None:intergenic
TCAAAGTGATTATAAGGATA+TGG 0.266359 1_1:+79231652 Msa0046810:CDS
AAACTGAAAGGAGTTAAATT+TGG 0.268825 1_1:-79228116 None:intergenic
ATTAAACTCTTCGAAACATT+TGG 0.268951 1_1:+79233177 Msa0046810:CDS
TAAAATTTATATATAAATTA+GGG 0.270926 1_1:+79240852 Msa0046810:three_prime_UTR
CACTGTTCACCTTGTGAATC+AGG 0.273724 1_1:+79228908 Msa0046810:CDS
AGAATTTCAAAGTGATTATA+AGG 0.273904 1_1:+79231646 Msa0046810:CDS
AACTTTCCAACCACAACTTT+TGG 0.274089 1_1:-79237582 None:intergenic
AAGAAATTCTCCAAAATTAA+TGG 0.275151 1_1:+79232573 Msa0046810:CDS
CTGGCAATCTCATTTACTTT+TGG 0.278625 1_1:-79237798 None:intergenic
CTTTCGCATATTCTAATATC+TGG 0.280060 1_1:-79238697 None:intergenic
CAAGTACTAGTTGGTCCTTC+AGG 0.286760 1_1:+79234556 Msa0046810:CDS
TATGACACCTCAGATTCTTT+TGG 0.293502 1_1:+79229933 Msa0046810:CDS
GAAAAGGAAGCAAACCTTCT+AGG 0.293720 1_1:-79228510 None:intergenic
GAAAAGGGGAATTTCATATA+AGG 0.297055 1_1:+79239644 Msa0046810:intron
TGAACATGTACAGGAACTTT+TGG 0.298173 1_1:-79236337 None:intergenic
GCTGTCATCCCGAAAATCTT+TGG 0.298664 1_1:-79230507 None:intergenic
TTACCAAATACATACCTTTC+CGG 0.302883 1_1:-79233710 None:intergenic
ACTAGTATCAGAGGCTTTAC+TGG 0.304098 1_1:-79239805 None:intergenic
GATACTAGTGGTTCTATTCC+AGG 0.307960 1_1:+79239819 Msa0046810:CDS
CTCACAGTTGCCTATGTAAC+TGG 0.315910 1_1:+79233622 Msa0046810:CDS
TATAGTGAAAACAAACAAAA+AGG 0.317670 1_1:-79228265 None:intergenic
AGTGGTACGGCATTGTCTTC+TGG 0.318079 1_1:-79238731 None:intergenic
TTCATGTGGCCAAGTAGATT+TGG 0.321366 1_1:+79235128 Msa0046810:CDS
TTATTCTGGATTCGTTCTTC+TGG 0.326141 1_1:+79235023 Msa0046810:CDS
AGGAACAAGATGGTCATTTA+AGG 0.326315 1_1:-79234647 None:intergenic
AACCTTAACAAAGGCTGTTC+TGG 0.326656 1_1:-79235978 None:intergenic
ACTAACAGCTGCATCATTCA+TGG 0.328724 1_1:-79234196 None:intergenic
TTATATTGCCTTGAAGATCT+TGG 0.329349 1_1:+79231728 Msa0046810:CDS
ACGCCCTTAAATTAGATTCA+TGG 0.334554 1_1:-79234224 None:intergenic
CAACTGTGAGATGAGATATC+TGG 0.339305 1_1:-79233609 None:intergenic
ATTAGGTGTTTCTTCTACTT+TGG 0.340390 1_1:+79231212 Msa0046810:intron
TTACAAGTTGAGGAATACTA+TGG 0.345991 1_1:+79229066 Msa0046810:CDS
CTTGTTCTTCATCTTTCTCA+TGG 0.347032 1_1:+79228323 Msa0046810:exon
TTGGTCTTCAATTTGACAAC+TGG 0.347853 1_1:-79239694 None:intergenic
TACCAGTTCATCATCGGATA+TGG 0.349668 1_1:+79235613 Msa0046810:CDS
TACATCTAAAGGCACTTCTA+AGG 0.351571 1_1:-79237541 None:intergenic
ATCAGCTGTTTGACATAATC+AGG 0.353526 1_1:+79234163 Msa0046810:CDS
CAACTCTCCCGGATCAATTT+CGG 0.362097 1_1:-79238570 None:intergenic
GCAGCTGCAGCTGCAGGTGC+AGG 0.362499 1_1:+79234724 Msa0046810:CDS
GGGAACAGATCGCAACTTAC+AGG 0.363807 1_1:+79236809 Msa0046810:CDS
CTGAAGGACCAACTAGTACT+TGG 0.367075 1_1:-79234555 None:intergenic
TCGAGTGCAGCTGCAGCTGC+AGG 0.367600 1_1:+79234718 Msa0046810:CDS
CCTTAGGAGCTTTAATCCCT+TGG 0.368445 1_1:-79238754 None:intergenic
CTTCACTTCACATGATGAAA+TGG 0.369092 1_1:+79237700 Msa0046810:CDS
GCAATTATGGATACAGGTTC+AGG 0.372430 1_1:+79228795 Msa0046810:CDS
TTAAACTCTTCGAAACATTT+GGG 0.373506 1_1:+79233178 Msa0046810:CDS
AGGAGACTGGTCAAGCTATT+AGG 0.377557 1_1:+79228847 Msa0046810:CDS
ATTCCATGTATCAACTCCTT+TGG 0.380033 1_1:-79229091 None:intergenic
TTGCCAACTTGGTTCCTAGA+AGG 0.381790 1_1:+79228496 Msa0046810:CDS
ATTTAAGGGCGTTTACTGTA+AGG 0.382887 1_1:+79234235 Msa0046810:CDS
GTCTAGATCTTCCACGAGAT+TGG 0.384732 1_1:-79233916 None:intergenic
TCTCGAACCAATCGTTCATT+TGG 0.386499 1_1:-79239428 None:intergenic
TAAGAGGCAGAAAGAGATAT+TGG 0.388865 1_1:+79233675 Msa0046810:CDS
TTCAGGCATTATGTGGTTCA+TGG 0.391867 1_1:+79234929 Msa0046810:CDS
CACACTGTTCCTTGTGATTG+TGG 0.393562 1_1:+79237510 Msa0046810:CDS
ATTCAACAGAATATAAAGAT+AGG 0.395101 1_1:+79240121 Msa0046810:CDS
TGAAAACATCTTGGATTCTC+AGG 0.395509 1_1:+79231260 Msa0046810:CDS
TTTATATTCAATCGGTTAGT+TGG 0.396278 1_1:-79240556 None:intergenic
GTCTAAAAGAGATAGATTAT+TGG 0.397020 1_1:-79240529 None:intergenic
AACTAACCGATTGAATATAA+AGG 0.400111 1_1:+79240558 Msa0046810:three_prime_UTR
ATAGGCAGCGATTCAAAATT+GGG 0.402788 1_1:-79234481 None:intergenic
ACAATTGCAATTATGGATAC+AGG 0.403608 1_1:+79228789 Msa0046810:CDS
TGGACTGTTGTGTGCTTATG+AGG 0.404000 1_1:+79231748 Msa0046810:CDS
GACTTCTAAACAAGTGCCCT+TGG 0.406111 1_1:-79240892 None:intergenic
CTTCTGCTATTGCATTTGTT+AGG 0.407083 1_1:+79235489 Msa0046810:CDS
ATCAGATCTTGAAAACATCT+TGG 0.407227 1_1:+79231251 Msa0046810:CDS
TGGCAGAGGCTTGAATTCCT+TGG 0.410063 1_1:+79238497 Msa0046810:intron
GATCTAGTAGAGAGTATTGC+TGG 0.410136 1_1:+79239194 Msa0046810:CDS
TTGTAAGAAGCTGCATCAAA+TGG 0.411483 1_1:+79234621 Msa0046810:CDS
CCTTTCCCCTTGGACTGTTG+TGG 0.413118 1_1:-79235333 None:intergenic
GGAGAATCTTGTTCAACATT+GGG 0.413482 1_1:-79228453 None:intergenic
ATTAACATCAACAACACAAT+TGG 0.415419 1_1:-79235666 None:intergenic
ATAATATTGTCTGCTTCTAA+AGG 0.420183 1_1:-79234682 None:intergenic
TACCACTTGTGGCTTCTCCT+TGG 0.420936 1_1:-79240478 None:intergenic
TGGTTGGAAAGTTGTGTGAC+AGG 0.421313 1_1:+79237592 Msa0046810:CDS
GATGAGTGTCATTGGGCATC+AGG 0.421428 1_1:+79230009 Msa0046810:CDS
CAGCTTAGAGCAGAGATAAA+TGG 0.422469 1_1:+79236469 Msa0046810:CDS
ACTTCTAAACAAGTGCCCTT+GGG 0.424534 1_1:-79240891 None:intergenic
CTCTATTTGAATCGTGTAAA+GGG 0.426557 1_1:+79240258 Msa0046810:CDS
ACTTTGGGCATACCAGGTTA+TGG 0.427539 1_1:+79240323 Msa0046810:CDS
CTCCAACATCAAAATAAATT+GGG 0.429557 1_1:-79233948 None:intergenic
CGTATCACACACGAGCAGTT+TGG 0.432099 1_1:-79233860 None:intergenic
AGTAGATTTGGATGCCGAAC+AGG 0.434369 1_1:+79235140 Msa0046810:CDS
TTCCATATCCGATGATGAAC+TGG 0.434506 1_1:-79235615 None:intergenic
TGTGAAAGATAATGTAGCTT+TGG 0.434658 1_1:+79235691 Msa0046810:CDS
GCATGAAATTTGGCTCCATC+AGG 0.435383 1_1:-79234961 None:intergenic
AGTACTTGGAAAGCTGCATT+AGG 0.435580 1_1:-79234541 None:intergenic
TTACACAATATTTCCAGAAA+AGG 0.437912 1_1:+79235825 Msa0046810:CDS
CAATTACCTTTATATTCAAT+CGG 0.437920 1_1:-79240564 None:intergenic
TTCTGTCAAGGGACTCTTGG+TGG 0.438568 1_1:+79237848 Msa0046810:CDS
ATCCAGAACAGCCTTTGTTA+AGG 0.439078 1_1:+79235976 Msa0046810:CDS
AGAAACCCTCATTGCCAACT+TGG 0.443432 1_1:+79228485 Msa0046810:CDS
TATTTATTCTAGTACCTGTT+CGG 0.443523 1_1:-79235154 None:intergenic
TATCACTTCTAGCTTCTCCT+TGG 0.444573 1_1:-79240358 None:intergenic
CTTTATGAGTTACAGCGGCT+TGG 0.447076 1_1:+79240416 Msa0046810:CDS
AACGACAGAAAGTTAAGTTA+AGG 0.447418 1_1:-79228176 None:intergenic
TTCTTCTACTTTGGTTTGTG+AGG 0.447765 1_1:+79231221 Msa0046810:CDS
GATTGCTATACTGCTTATCA+AGG 0.448025 1_1:+79228827 Msa0046810:CDS
ATTCCTTGGTGACTCAGTAT+TGG 0.449180 1_1:+79238511 Msa0046810:CDS
TCTTCTACTTTGGTTTGTGA+GGG 0.451372 1_1:+79231222 Msa0046810:CDS
TTGTCATTGTTCCCGTCAAA+AGG 0.452230 1_1:-79235776 None:intergenic
CTTCGAGTTTGGCAGATGGT+GGG 0.452358 1_1:+79236284 Msa0046810:intron
ATTATGATTAAGATTGATGA+TGG 0.453002 1_1:+79240443 Msa0046810:CDS
AGACCATGAATCTAATTTAA+GGG 0.455424 1_1:+79234221 Msa0046810:CDS
GACGGGAACAATGACAAGTC+TGG 0.458933 1_1:+79235782 Msa0046810:CDS
AATAAATAACAGATAGATAG+AGG 0.461169 1_1:+79240713 Msa0046810:three_prime_UTR
TGGAGAATCTTGTTCAACAT+TGG 0.462812 1_1:-79228454 None:intergenic
ACACTGTTCCTTGTGATTGT+GGG 0.463355 1_1:+79237511 Msa0046810:CDS
TCAGGCATTATGTGGTTCAT+GGG 0.467500 1_1:+79234930 Msa0046810:CDS
CGATAACATGGATTCAATCA+TGG 0.468217 1_1:+79228356 Msa0046810:CDS
ACACGGCACAGCCAGCGTTC+AGG 0.468496 1_1:+79234912 Msa0046810:CDS
TAATTCAACCCTACACAAGC+TGG 0.468514 1_1:+79236788 Msa0046810:CDS
GTGTGGAACTTTACATCTAA+AGG 0.469238 1_1:-79237552 None:intergenic
GTAAACGTCATCCTGTCTTC+CGG 0.470876 1_1:-79235806 None:intergenic
CACAACAGTCCAAGGGGAAA+GGG 0.471771 1_1:+79235334 Msa0046810:CDS
AAAAGGGGAATTTCATATAA+GGG 0.472147 1_1:+79239645 Msa0046810:CDS
ATATTGGATTCTTTCCGATC+CGG 0.475203 1_1:+79233691 Msa0046810:CDS
TCTCTATTTGAATCGTGTAA+AGG 0.476545 1_1:+79240257 Msa0046810:CDS
TTTCAAGATACCTAGCTCTC+TGG 0.477307 1_1:+79236504 Msa0046810:CDS
CCAAGGGATTAAAGCTCCTA+AGG 0.477461 1_1:+79238754 Msa0046810:CDS
CACTTCATACAGTTCGCTCC+GGG 0.480986 1_1:-79240064 None:intergenic
GAGTCATACCGAAATTGATC+CGG 0.481878 1_1:+79238562 Msa0046810:CDS
CCGCGTCGTTGGATTGCTCC+TGG 0.481949 1_1:+79237474 Msa0046810:CDS
ATTCTATATGCGCACCAAGA+TGG 0.482106 1_1:-79232677 None:intergenic
TTTATATTCTGTTGAATCAA+AGG 0.483393 1_1:-79240115 None:intergenic
TATAGAAATGATATGCTTGA+TGG 0.484452 1_1:+79229981 Msa0046810:CDS
ATCAAGAAGGCAAAGAAGCT+CGG 0.484643 1_1:-79236368 None:intergenic
TGTTAAAGATCGGACGGAGA+TGG 0.484934 1_1:+79231389 Msa0046810:CDS
GATTGTGTTGAAGCTCTGAT+AGG 0.485847 1_1:+79237648 Msa0046810:CDS
TTTGTGTCGAAAATAACTTT+GGG 0.487811 1_1:+79240308 Msa0046810:CDS
TTTAATTGCTACTGGCTTTG+GGG 0.488768 1_1:-79239718 None:intergenic
TGGTTATTGATGAGTGTCAT+TGG 0.488775 1_1:+79230001 Msa0046810:CDS
ATTGAAGAATCCCTCCATCT+TGG 0.490120 1_1:+79232663 Msa0046810:CDS
TAGATAGAGGCTGTAGGGGA+AGG 0.492047 1_1:+79240726 Msa0046810:three_prime_UTR
ATTTGAATCGTGTAAAGGGC+TGG 0.492271 1_1:+79240262 Msa0046810:CDS
AACATCCAAAATCATTTCAT+CGG 0.493687 1_1:-79233094 None:intergenic
CTGATAGGAGCATACTATGT+AGG 0.493943 1_1:+79237663 Msa0046810:CDS
CTGATGCACTAGCTCGTAAG+AGG 0.494037 1_1:+79233659 Msa0046810:CDS
ACAAGTCTGGACCGGAAGAC+AGG 0.496034 1_1:+79235795 Msa0046810:CDS
TTAAGGGACCACGAAAAGAA+AGG 0.496583 1_1:+79234885 Msa0046810:intron
ATACATGGAATTTGAAGAGC+TGG 0.496783 1_1:+79229103 Msa0046810:CDS
ACACTTCATACAGTTCGCTC+CGG 0.496841 1_1:-79240065 None:intergenic
TCTAATTTGCAGCAATTCAA+AGG 0.500223 1_1:-79240590 None:intergenic
ACAGATAGATAGAGGCTGTA+GGG 0.500505 1_1:+79240721 Msa0046810:three_prime_UTR
ATGAGGGTTTCTTCTTGAGA+TGG 0.501029 1_1:-79228474 None:intergenic
GATCTGTTCCCAGCTTGTGT+AGG 0.501621 1_1:-79236797 None:intergenic
AAAATAACTTTGGGCATACC+AGG 0.504602 1_1:+79240317 Msa0046810:CDS
TTCGGAACTTGAACTGTCAA+TGG 0.504675 1_1:+79237734 Msa0046810:CDS
CCGCATTTGAACCGCGTCGT+TGG 0.505883 1_1:+79237463 Msa0046810:CDS
ACGATTGGTTCGAGAGGGAA+AGG 0.507780 1_1:+79239436 Msa0046810:CDS
TGTATTGCTTCCAGTTACAT+AGG 0.510670 1_1:-79233632 None:intergenic
TTCGAGTTTGGCAGATGGTG+GGG 0.511630 1_1:+79236285 Msa0046810:intron
CACTTGATCAAGGTCGAGCT+TGG 0.512304 1_1:-79239234 None:intergenic
AGGAACCAAGTTGGCAATGA+GGG 0.513523 1_1:-79228490 None:intergenic
CGCAGGTCAGTCAACTCTCC+CGG 0.513760 1_1:-79238581 None:intergenic
CCACAACAGTCCAAGGGGAA+AGG 0.513928 1_1:+79235333 Msa0046810:CDS
AAACCTTCCACACTTGATCA+AGG 0.514027 1_1:-79239244 None:intergenic
CTCAAAGCATGAAACCGTGC+CGG 0.515863 1_1:-79231456 None:intergenic
ATCTGTTCCCAGCTTGTGTA+GGG 0.515946 1_1:-79236796 None:intergenic
GCAGCTTTCCAAGTACTAGT+TGG 0.516675 1_1:+79234547 Msa0046810:CDS
TCAAAGCATGAAACCGTGCC+GGG 0.518705 1_1:-79231455 None:intergenic
AGCATATCATTTCTATACTC+AGG 0.519015 1_1:-79229975 None:intergenic
TCTGTATTTAATCTCAAAGA+TGG 0.519402 1_1:+79235089 Msa0046810:CDS
ACAACAGTCCAAGATCTTCA+AGG 0.519548 1_1:-79231736 None:intergenic
TTCAAAATTGGGCTTTGCAG+AGG 0.520238 1_1:-79234470 None:intergenic
TCTGAGTCAGAACATGGAAC+TGG 0.520388 1_1:+79237888 Msa0046810:CDS
AACTGTGAGATGAGATATCT+GGG 0.521133 1_1:-79233608 None:intergenic
GTCTAAAGTGACTGATGCTC+CGG 0.521358 1_1:-79234286 None:intergenic
TAGAGAGAAGTGAAACTGAA+AGG 0.521649 1_1:-79228128 None:intergenic
ATCTACTCTTACTTGTCTCG+TGG 0.521945 1_1:-79234348 None:intergenic
GCTGTAACTCATAAAGCGCT+TGG 0.523645 1_1:-79240409 None:intergenic
TGTAAGAAGCTGCATCAAAT+GGG 0.524329 1_1:+79234622 Msa0046810:CDS
TTGATTTATAAGACTGACAC+TGG 0.524730 1_1:-79234310 None:intergenic
TTGTTCAAAGGCAGTAGACA+TGG 0.525265 1_1:+79233125 Msa0046810:CDS
TCAAGAAGGCAAAGAAGCTC+GGG 0.525447 1_1:-79236367 None:intergenic
CGTAAGTCCACAACAGTCCA+AGG 0.525483 1_1:+79235326 Msa0046810:CDS
TCACTACAGGGATCAGTTGG+AGG 0.526075 1_1:+79228740 Msa0046810:intron
CTGCTATTGCATTTGTTAGG+CGG 0.526207 1_1:+79235492 Msa0046810:CDS
GGTTATTGATGAGTGTCATT+GGG 0.526502 1_1:+79230002 Msa0046810:CDS
TTCAGGAAAAGATGTTCGAC+AGG 0.529088 1_1:+79234573 Msa0046810:CDS
AGATAGAGGCTGTAGGGGAA+GGG 0.529437 1_1:+79240727 Msa0046810:three_prime_UTR
GTTCGGCATCCAAATCTACT+TGG 0.530532 1_1:-79235137 None:intergenic
CCAGCACCTTCTGCATAGCT+CGG 0.531930 1_1:+79238661 Msa0046810:CDS
TCAGCTGCAAATGAATCTAC+TGG 0.531972 1_1:+79239765 Msa0046810:CDS
CTTATCGTCCTTGAGACAAT+GGG 0.533161 1_1:+79236758 Msa0046810:CDS
ATATTCAATCGGTTAGTTGG+TGG 0.533605 1_1:-79240553 None:intergenic
TTCACATGATGAAATGGCTC+GGG 0.533862 1_1:+79237706 Msa0046810:CDS
CCGAGCTATGCAGAAGGTGC+TGG 0.534055 1_1:-79238661 None:intergenic
CAGCACCTTCTGCATAGCTC+GGG 0.535169 1_1:+79238662 Msa0046810:CDS
ATCTAGTAGAGAGTATTGCT+GGG 0.535320 1_1:+79239195 Msa0046810:CDS
GCCAGCGTTCAGGCATTATG+TGG 0.535360 1_1:+79234922 Msa0046810:CDS
TCTAAAGGATCTTCAATGAA+AGG 0.535968 1_1:-79234667 None:intergenic
AATTGAAGCTTTGTGGTCGA+AGG 0.539048 1_1:+79231491 Msa0046810:CDS
TCGCTGCCTATGGAGGGAGG+AGG 0.539716 1_1:+79234493 Msa0046810:CDS
GGTGGAATGTGAACATGTAC+AGG 0.540186 1_1:-79236346 None:intergenic
GAACACAGATTTACAAGTTG+AGG 0.540223 1_1:+79229056 Msa0046810:CDS
CTTCACATGATGAAATGGCT+CGG 0.542181 1_1:+79237705 Msa0046810:CDS
GAAATGGCTCGGGATTGATT+CGG 0.543137 1_1:+79237716 Msa0046810:CDS
GTGGAGAGACGCAGCAGTAA+TGG 0.545570 1_1:-79237766 None:intergenic
GCATCACCAGTTGGTAAAAG+AGG 0.545860 1_1:+79230528 Msa0046810:CDS
TGAAAGAATCATTACAGCAA+AGG 0.546451 1_1:+79233558 Msa0046810:CDS
TGAGCTCTTTATACCACTTG+TGG 0.548283 1_1:-79240489 None:intergenic
TGAATCTACTGGTGATCTGA+AGG 0.548312 1_1:+79239776 Msa0046810:CDS
TATTCTGTTGAATCAAAGGA+AGG 0.549100 1_1:-79240111 None:intergenic
AGTCATACCGAAATTGATCC+GGG 0.549628 1_1:+79238563 Msa0046810:CDS
GGTCCAAAGGAGTTGATACA+TGG 0.550175 1_1:+79229088 Msa0046810:CDS
GAAGATCCAAAAGTTGTGGT+TGG 0.550207 1_1:+79237576 Msa0046810:CDS
AATTGCATTAATTCACGCAA+TGG 0.550873 1_1:-79239317 None:intergenic
GGATTTATCAAACGATAACA+TGG 0.551674 1_1:+79228344 Msa0046810:CDS
TGGTCTTCAATTTGACAACT+GGG 0.553368 1_1:-79239693 None:intergenic
TCAGATCTTTGCAGATACAT+TGG 0.553780 1_1:+79235447 Msa0046810:CDS
TGTGTGACAGGGGTCATCGC+TGG 0.553943 1_1:+79237604 Msa0046810:CDS
TTTAATCCCTTGGAGTGGTA+CGG 0.555079 1_1:-79238744 None:intergenic
CAAGTCATCACAAGTTGGCC+CGG 0.555264 1_1:+79236309 Msa0046810:CDS
TCAGTTGTTGAAGGATCTTG+AGG 0.555453 1_1:+79239496 Msa0046810:CDS
ATAAGACAAACCAGAGAGCT+AGG 0.555529 1_1:-79236514 None:intergenic
ATGTGCCCTCCTCCCTCCAT+AGG 0.556287 1_1:-79234499 None:intergenic
TATCTCTGCTCTAAGCTGAC+TGG 0.558643 1_1:-79236464 None:intergenic
GGTTGGAAAGTTGTGTGACA+GGG 0.560774 1_1:+79237593 Msa0046810:CDS
CATTTGTCTGAGTCAGAACA+TGG 0.560793 1_1:+79237882 Msa0046810:CDS
CGACCTTGATCAAGTGTGGA+AGG 0.562337 1_1:+79239241 Msa0046810:CDS
AGAGTTACGTTGTTAAAGAT+CGG 0.562761 1_1:+79231379 Msa0046810:intron
GATATAACTACAAACTGTCG+TGG 0.563024 1_1:-79233894 None:intergenic
GTAGCTTTGGCCATTCATAC+CGG 0.563943 1_1:+79235704 Msa0046810:CDS
TTGTTTCAAACACAGGCACT+TGG 0.564025 1_1:+79239170 Msa0046810:intron
ATGGAACGTCTTGAGTTGCT+AGG 0.564932 1_1:+79236666 Msa0046810:CDS
CAGATAGATAGAGGCTGTAG+GGG 0.565124 1_1:+79240722 Msa0046810:three_prime_UTR
TTAATTGCTACTGGCTTTGG+GGG 0.565556 1_1:-79239717 None:intergenic
GGTCAAGCTATTAGGTCTAG+TGG 0.567727 1_1:+79228855 Msa0046810:CDS
TCATACTGTGTGGATTCTAC+CGG 0.568738 1_1:+79234267 Msa0046810:CDS
ACAACTGATGTACTTGAGGA+AGG 0.569405 1_1:+79233827 Msa0046810:CDS
ACAGTTGCCAAATGAACGAT+TGG 0.570234 1_1:+79239421 Msa0046810:CDS
TGCATTAATTCACGCAATGG+AGG 0.571294 1_1:-79239314 None:intergenic
TGGAACTGGCTGCTGCTATG+AGG 0.571392 1_1:+79237902 Msa0046810:CDS
AATTTAGGGCATTGCATCAG+CGG 0.571401 1_1:+79231681 Msa0046810:CDS
TGTCAAGGGACTCTTGGTGG+AGG 0.571645 1_1:+79237851 Msa0046810:CDS
ACTTATCGTCCTTGAGACAA+TGG 0.571675 1_1:+79236757 Msa0046810:CDS
CGCTGCCTATGGAGGGAGGA+GGG 0.573547 1_1:+79234494 Msa0046810:CDS
ATTTACAACTGATGTACTTG+AGG 0.574079 1_1:+79233823 Msa0046810:CDS
AAGAGGAGAGGAAAGATGAA+AGG 0.575452 1_1:+79240664 Msa0046810:three_prime_UTR
TTGTGATACCAGTTCATCAT+CGG 0.576181 1_1:+79235607 Msa0046810:CDS
GACAATGCCGTACCACTCCA+AGG 0.577256 1_1:+79238737 Msa0046810:CDS
GGATTCTTTCCGATCCGGAA+AGG 0.577973 1_1:+79233696 Msa0046810:CDS
ATAGATGCCATGTGATGAGC+AGG 0.578694 1_1:-79238535 None:intergenic
ATATCATTTGACTTCTCAAG+TGG 0.580708 1_1:-79235419 None:intergenic
TTTGAATCGCTGCCTATGGA+GGG 0.582433 1_1:+79234487 Msa0046810:CDS
GTGTGTATACAGTCTTGTCC+AGG 0.582962 1_1:-79237492 None:intergenic
ATGCAATTATCCGACTCTCT+CGG 0.583157 1_1:+79239332 Msa0046810:CDS
CACTGAAGATCCAAAAGTTG+TGG 0.583275 1_1:+79237572 Msa0046810:CDS
ATATAACTACAAACTGTCGT+GGG 0.583912 1_1:-79233893 None:intergenic
AAATATCCTAAGAAACATGA+AGG 0.587614 1_1:+79236732 Msa0046810:CDS
GAATTTGAAGAGCTGGCAGA+AGG 0.589098 1_1:+79229110 Msa0046810:CDS
TATGCAGAAGGTGCTGGTGA+AGG 0.590595 1_1:-79238655 None:intergenic
AAGACTTCTGTCATTTCATG+TGG 0.590842 1_1:+79235114 Msa0046810:CDS
TGTTCCTTGTGATTGTGGGT+TGG 0.592175 1_1:+79237515 Msa0046810:CDS
AAAATAAGTCATGATAAGAA+GGG 0.592344 1_1:+79239371 Msa0046810:CDS
GAACAATGACAAGTCTGGAC+CGG 0.593359 1_1:+79235787 Msa0046810:CDS
AAATACATACCTTTCCGGAT+CGG 0.597210 1_1:-79233705 None:intergenic
ATAACATCAAAGATTCAATA+CGG 0.598075 1_1:-79236441 None:intergenic
CTATATGCGCACCAAGATGG+AGG 0.598347 1_1:-79232674 None:intergenic
TGTAGTTATATCCAATCTCG+TGG 0.602456 1_1:+79233905 Msa0046810:CDS
ATACTGCTTATCAAGGAGAC+TGG 0.603433 1_1:+79228834 Msa0046810:CDS
AGCTCGACCTTGATCAAGTG+TGG 0.603733 1_1:+79239237 Msa0046810:CDS
ACGAATCTCAACATGCTCCA+TGG 0.603831 1_1:-79239396 None:intergenic
CCCGTCAAAAGGACTTTCAG+CGG 0.603995 1_1:-79235765 None:intergenic
TATTGGACCTGCTCATCACA+TGG 0.605197 1_1:+79238528 Msa0046810:CDS
CTTCTAAACAAGTGCCCTTG+GGG 0.605554 1_1:-79240890 None:intergenic
ACTTGTGAATTACAGAAAAG+GGG 0.606277 1_1:+79239630 Msa0046810:intron
TACAAGTTGAGGAATACTAT+GGG 0.606687 1_1:+79229067 Msa0046810:CDS
GAGGAATACTATGGGTCCAA+AGG 0.606889 1_1:+79229075 Msa0046810:CDS
GTCAAAGCTTGATGATGATG+TGG 0.607279 1_1:+79235050 Msa0046810:CDS
TATGGTGATATAAAATGCCA+AGG 0.607715 1_1:+79240341 Msa0046810:CDS
CTTCAATGAAAGGAACAAGA+TGG 0.607753 1_1:-79234657 None:intergenic
CGATTGGTTCGAGAGGGAAA+GGG 0.608199 1_1:+79239437 Msa0046810:CDS
TAGGAACCAAGTTGGCAATG+AGG 0.608202 1_1:-79228491 None:intergenic
GGAGCATACTATGTAGGTGG+CGG 0.608349 1_1:+79237669 Msa0046810:CDS
ATGAGGCACAATAACTGACT+AGG 0.608450 1_1:-79233529 None:intergenic
ACCACATAATGCCTGAACGC+TGG 0.608994 1_1:-79234923 None:intergenic
AAACCTTCTAGGAACCAAGT+TGG 0.609207 1_1:-79228499 None:intergenic
AGAAGGCAAAGAAGCTCGGG+TGG 0.610123 1_1:-79236364 None:intergenic
TACAAAATATCCGAGAGAGT+CGG 0.611179 1_1:-79239342 None:intergenic
TCATGATAAGAAGGGAACCA+TGG 0.611845 1_1:+79239379 Msa0046810:CDS
TTGCTGTTATCGGTATCACA+TGG 0.611870 1_1:-79235569 None:intergenic
TCAATACGGTACATAAGAGA+TGG 0.612369 1_1:-79236427 None:intergenic
TGATTCACAAGGTGAACAGT+GGG 0.612391 1_1:-79228906 None:intergenic
AACAGATAGATAGAGGCTGT+AGG 0.616401 1_1:+79240720 Msa0046810:three_prime_UTR
AAATGCTAACAAGTGCCCCA+AGG 0.617280 1_1:+79240875 Msa0046810:three_prime_UTR
GGAGCTTTAATCCCTTGGAG+TGG 0.618126 1_1:-79238749 None:intergenic
ACGAACAGCCCATTGTCTCA+AGG 0.618134 1_1:-79236766 None:intergenic
GAATCGCTGCCTATGGAGGG+AGG 0.618246 1_1:+79234490 Msa0046810:CDS
AATTCAACCCTACACAAGCT+GGG 0.619190 1_1:+79236789 Msa0046810:CDS
GTTGAATCAAAGGAAGGCAA+TGG 0.619560 1_1:-79240105 None:intergenic
TCTACTCTTACTTGTCTCGT+GGG 0.622447 1_1:-79234347 None:intergenic
GAATCGTGTAAAGGGCTGGA+AGG 0.623257 1_1:+79240266 Msa0046810:CDS
AAGGCATCCAAAAGAATCTG+AGG 0.623884 1_1:-79229940 None:intergenic
TATATGCGCACCAAGATGGA+GGG 0.624754 1_1:-79232673 None:intergenic
GGGATGACAGCATCACCAGT+TGG 0.624886 1_1:+79230519 Msa0046810:CDS
AATGCTAACAAGTGCCCCAA+GGG 0.626494 1_1:+79240876 Msa0046810:three_prime_UTR
CCTTTGTTAAGGTTGAAGCA+AGG 0.628642 1_1:+79235987 Msa0046810:CDS
TCATGGGGAGACAAACCTGA+TGG 0.631498 1_1:+79234946 Msa0046810:CDS
CTGATTCACAAGGTGAACAG+TGG 0.632679 1_1:-79228907 None:intergenic
CCTTGCTTCAACCTTAACAA+AGG 0.633143 1_1:-79235987 None:intergenic
AATAGAACCACTAGTATCAG+AGG 0.633265 1_1:-79239814 None:intergenic
TGTTGAATTTGATTGTTCAA+AGG 0.633657 1_1:+79233113 Msa0046810:CDS
TTACGTTGTTAAAGATCGGA+CGG 0.635592 1_1:+79231383 Msa0046810:CDS
AAATGAACGATTGGTTCGAG+AGG 0.636908 1_1:+79239430 Msa0046810:CDS
AGAAAGACACAGAACTATTG+TGG 0.637159 1_1:+79235369 Msa0046810:CDS
AGTAAAGCCTCTGATACTAG+TGG 0.637735 1_1:+79239807 Msa0046810:CDS
CCAACGACGCGGTTCAAATG+CGG 0.639511 1_1:-79237463 None:intergenic
GGGGACAAGTCATCACAAGT+TGG 0.641347 1_1:+79236304 Msa0046810:CDS
GTAACAATTGGAGATAGCAG+AGG 0.641688 1_1:-79239272 None:intergenic
ACTTGGAAAGCTGCATTAGG+TGG 0.643425 1_1:-79234538 None:intergenic
TGATTCTTTCAACAAAGATG+AGG 0.643630 1_1:-79233546 None:intergenic
ATAGGAGCATACTATGTAGG+TGG 0.647415 1_1:+79237666 Msa0046810:CDS
AAATGAGATTGCCAGCCTTG+AGG 0.647791 1_1:+79237806 Msa0046810:CDS
AACTACAAACTGTCGTGGGG+AGG 0.648578 1_1:-79233889 None:intergenic
GTAGATTCTATGACCCGGCA+CGG 0.648899 1_1:+79231442 Msa0046810:CDS
GTAAGTCCACAACAGTCCAA+GGG 0.649332 1_1:+79235327 Msa0046810:CDS
AAGCGCTTTATGAGTTACAG+CGG 0.652097 1_1:+79240411 Msa0046810:CDS
AAAGGGCTGGAAGGAAGCAA+AGG 0.653325 1_1:+79240275 Msa0046810:CDS
CAGGCATTATGTGGTTCATG+GGG 0.653432 1_1:+79234931 Msa0046810:CDS
TGTTCAAAGGCAGTAGACAT+GGG 0.654062 1_1:+79233126 Msa0046810:CDS
ACGAAAAGAAAGGAGTTACA+CGG 0.654733 1_1:+79234895 Msa0046810:CDS
GTTTCCAACCCACAATCACA+AGG 0.656030 1_1:-79237519 None:intergenic
AATGAACGATTGGTTCGAGA+GGG 0.660743 1_1:+79239431 Msa0046810:CDS
TGCCAAGGAGAAGCCACAAG+TGG 0.662023 1_1:+79240476 Msa0046810:CDS
AACAACATGCCTGATTCACA+AGG 0.662863 1_1:-79228917 None:intergenic
TATTCACAGAAGCAGAACGC+AGG 0.662995 1_1:-79238598 None:intergenic
GAAAACAGAATCATACTGTG+TGG 0.667214 1_1:+79234257 Msa0046810:CDS
TCAAAGCTTGATGATGATGT+GGG 0.670136 1_1:+79235051 Msa0046810:CDS
GAGTTGTAGATTCTATGACC+CGG 0.672109 1_1:+79231437 Msa0046810:CDS
ACAATGCCGTACCACTCCAA+GGG 0.681515 1_1:+79238738 Msa0046810:CDS
ATAATCCCGAGCTATGCAGA+AGG 0.684696 1_1:-79238667 None:intergenic
TAAGTCCACAACAGTCCAAG+GGG 0.684874 1_1:+79235328 Msa0046810:CDS
ACTTCATACAGTTCGCTCCG+GGG 0.689338 1_1:-79240063 None:intergenic
TCTAGTAGAGAGTATTGCTG+GGG 0.695988 1_1:+79239196 Msa0046810:CDS
GATGGCGATGTAGAATGCCA+AGG 0.699597 1_1:+79240461 Msa0046810:CDS
CTGTTATCGGTATCACATGG+TGG 0.700817 1_1:-79235566 None:intergenic
GATGATGAACTGGTATCACA+AGG 0.703578 1_1:-79235605 None:intergenic
GGTCCAATACTGAGTCACCA+AGG 0.706216 1_1:-79238514 None:intergenic
GTTGGAAAGTTGTGTGACAG+GGG 0.708609 1_1:+79237594 Msa0046810:CDS
TATAACTACAAACTGTCGTG+GGG 0.713411 1_1:-79233892 None:intergenic
CCAGGAGCAATCCAACGACG+CGG 0.735731 1_1:-79237474 None:intergenic
TTCTGACTCAGACAAATGTG+TGG 0.744048 1_1:-79237877 None:intergenic
AAGTGTGCAAGAGAAAGCTG+TGG 0.767741 1_1:+79240082 Msa0046810:CDS
GATGAACTGGTATCACAAGG+TGG 0.801842 1_1:-79235602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATTTATATATAAATT+AGG + chr1_1:79240851-79240870 Msa0046810:three_prime_UTR 0.0%
!! TAAAATTTATATATAAATTA+GGG + chr1_1:79240852-79240871 Msa0046810:three_prime_UTR 0.0%
!! AAAAAAAAAATTGATGAATT+GGG - chr1_1:79228554-79228573 None:intergenic 10.0%
!! AAAAAAAAAAATTGATGAAT+TGG - chr1_1:79228555-79228574 None:intergenic 10.0%
!!! ATTCATCAATTTTTTTTTTT+TGG + chr1_1:79228555-79228574 Msa0046810:intron 10.0%
!!! TCAATTTATTTTTGAATTTA+TGG + chr1_1:79229274-79229293 Msa0046810:intron 10.0%
!! ATGATTAATGAATAAAATAA+GGG - chr1_1:79229565-79229584 None:intergenic 10.0%
!!! TTATTTTATTCATTAATCAT+GGG + chr1_1:79229565-79229584 Msa0046810:intron 10.0%
!! AAATATAACATTATCTTAAA+AGG - chr1_1:79231969-79231988 None:intergenic 10.0%
!! AAATAAAATAGAATAATGAA+AGG - chr1_1:79232798-79232817 None:intergenic 10.0%
!!! TTTCATTATTCTATTTTATT+TGG + chr1_1:79232797-79232816 Msa0046810:intron 10.0%
!! TTTCTATTAATGAATATAAA+AGG + chr1_1:79233375-79233394 Msa0046810:intron 10.0%
!! TTCTATTAATGAATATAAAA+GGG + chr1_1:79233376-79233395 Msa0046810:intron 10.0%
!! TATTTAAAAAAAAAAATGGT+CGG + chr1_1:79233746-79233765 Msa0046810:intron 10.0%
!! TACTAGAATAAATAAATTTA+AGG + chr1_1:79235163-79235182 Msa0046810:intron 10.0%
!! AAAATATTAAGTAATTCATT+AGG + chr1_1:79237141-79237160 Msa0046810:intron 10.0%
!!! TCATATATTTAGAATTATTT+AGG + chr1_1:79237938-79237957 Msa0046810:intron 10.0%
!! AATACAAAATTTGATGAATT+GGG - chr1_1:79228666-79228685 None:intergenic 15.0%
!! AAATACAAAATTTGATGAAT+TGG - chr1_1:79228667-79228686 None:intergenic 15.0%
!!! ATTCATCAAATTTTGTATTT+TGG + chr1_1:79228667-79228686 Msa0046810:intron 15.0%
!!! ATCATAAAGATTGTATTTTT+GGG + chr1_1:79228698-79228717 Msa0046810:intron 15.0%
!! CATGATTAATGAATAAAATA+AGG - chr1_1:79229566-79229585 None:intergenic 15.0%
!!! CTTATTTTATTCATTAATCA+TGG + chr1_1:79229564-79229583 Msa0046810:intron 15.0%
!!! ATTGTTTTGTTCATTTTTTT+TGG + chr1_1:79230178-79230197 Msa0046810:intron 15.0%
!!! TTAACTACTTCATTAAATTT+TGG + chr1_1:79230223-79230242 Msa0046810:intron 15.0%
!!! CTTTAAAGCATATATTAATA+TGG + chr1_1:79230735-79230754 Msa0046810:intron 15.0%
!! TATTTCTCATAATATTGAAA+AGG - chr1_1:79230990-79231009 None:intergenic 15.0%
!!! TCATTATTTTCTTACAATAA+AGG + chr1_1:79231576-79231595 Msa0046810:intron 15.0%
!!! TCTATTTTTGTTGTTTATAA+TGG + chr1_1:79231834-79231853 Msa0046810:intron 15.0%
!!! TATTTTGTTTAACTATTTCA+CGG + chr1_1:79231984-79232003 Msa0046810:intron 15.0%
!! TATTCATACATATTATCAAA+AGG - chr1_1:79232069-79232088 None:intergenic 15.0%
!! TAAAAAATTCTCTATCAATT+TGG + chr1_1:79232257-79232276 Msa0046810:intron 15.0%
!!! ATGATATAATTTTCCTAAAA+TGG + chr1_1:79232360-79232379 Msa0046810:intron 15.0%
!! AATAAGTGTAAAGATTTAAA+AGG - chr1_1:79232728-79232747 None:intergenic 15.0%
!!! TTAATAAGTTCAAGTAATTT+TGG - chr1_1:79233162-79233181 None:intergenic 15.0%
!!! CTTAATGCTTTTTTTTATTT+AGG + chr1_1:79233790-79233809 Msa0046810:intron 15.0%
!! AGACAATATTATAAAAAACA+AGG + chr1_1:79234693-79234712 Msa0046810:CDS 15.0%
!! AAATTTATAAGCATGAAATT+TGG - chr1_1:79234974-79234993 None:intergenic 15.0%
!! ATTAATGCTCTATAATATTT+CGG - chr1_1:79235195-79235214 None:intergenic 15.0%
!! TATAACCATTATAAATAGAA+GGG - chr1_1:79237248-79237267 None:intergenic 15.0%
!! AAAGATAAAATTAAGTCAAA+TGG - chr1_1:79238127-79238146 None:intergenic 15.0%
!!! AGAGAAATTCTTTTTTTTTT+AGG - chr1_1:79238858-79238877 None:intergenic 15.0%
!! TTGTAATAGATAGATAAAAT+AGG + chr1_1:79238990-79239009 Msa0046810:intron 15.0%
!! AATAATTAAAACCACAATTA+AGG + chr1_1:79239042-79239061 Msa0046810:intron 15.0%
!! AAAAAAAAAAAAAACGAACT+AGG - chr1_1:79239552-79239571 None:intergenic 15.0%
!! ATCAATCAAAATGAATAAAA+AGG + chr1_1:79240035-79240054 Msa0046810:CDS 15.0%
!! TCAATCAAAATGAATAAAAA+GGG + chr1_1:79240036-79240055 Msa0046810:CDS 15.0%
!!! AATATTTAAAATACTAGTCT+TGG - chr1_1:79240169-79240188 None:intergenic 15.0%
!!! TCGTTTTTTTTTTCTTTCAA+TGG + chr1_1:79228194-79228213 Msa0046810:five_prime_UTR 20.0%
!! TGTTAAAAAAAACAAAGCAA+AGG - chr1_1:79228235-79228254 None:intergenic 20.0%
!! AAAACAAACAAAAAGGTTTA+AGG - chr1_1:79228261-79228280 None:intergenic 20.0%
!! TATAGTGAAAACAAACAAAA+AGG - chr1_1:79228268-79228287 None:intergenic 20.0%
!!! TATCATAAAAATTGCGTTTT+TGG + chr1_1:79228604-79228623 Msa0046810:intron 20.0%
!!! ATCATAAAAATTGCGTTTTT+GGG + chr1_1:79228605-79228624 Msa0046810:intron 20.0%
!!! GATCATAAAGATTGTATTTT+TGG + chr1_1:79228697-79228716 Msa0046810:intron 20.0%
!!! AAATCTATTTTGAGTAAAGA+TGG - chr1_1:79229656-79229675 None:intergenic 20.0%
!!! TTTTTTATTGTTCTGATTTG+CGG + chr1_1:79229821-79229840 Msa0046810:intron 20.0%
!! TTTCATTCTTTCTATCATAT+AGG + chr1_1:79229903-79229922 Msa0046810:intron 20.0%
!!! TTTTGTTCATTTTTTTTGGA+GGG + chr1_1:79230182-79230201 Msa0046810:intron 20.0%
!! GCATATATTAATATGGTAAA+TGG + chr1_1:79230742-79230761 Msa0046810:intron 20.0%
!! TTCAGTGAATTTATAAATTG+TGG + chr1_1:79230789-79230808 Msa0046810:intron 20.0%
!! ATCTCATGTATATAAATAGT+TGG + chr1_1:79230957-79230976 Msa0046810:intron 20.0%
!! TCAATATTATGAGAAATAGT+TGG + chr1_1:79230992-79231011 Msa0046810:intron 20.0%
!! TTTCATTTATGTCATGAATT+AGG + chr1_1:79231195-79231214 Msa0046810:intron 20.0%
!! AGAAAATAATGAGTAAGAAA+GGG - chr1_1:79231568-79231587 None:intergenic 20.0%
!! AAGAAAATAATGAGTAAGAA+AGG - chr1_1:79231569-79231588 None:intergenic 20.0%
!! CTGATGAAAATTAATATGTT+TGG + chr1_1:79231602-79231621 Msa0046810:intron 20.0%
!! AGAATTTCAAAGTGATTATA+AGG + chr1_1:79231646-79231665 Msa0046810:CDS 20.0%
!! TAACATATGTTCTTAATCAA+GGG + chr1_1:79231873-79231892 Msa0046810:intron 20.0%
!! TGTAAATTAAGCAAAAACTA+TGG + chr1_1:79231927-79231946 Msa0046810:intron 20.0%
!!! TAACATTTTTTCTATCAATC+TGG + chr1_1:79232119-79232138 Msa0046810:intron 20.0%
!! ATTAACAATTCATATTGACA+TGG + chr1_1:79232164-79232183 Msa0046810:intron 20.0%
!! AAGAAATTCTCCAAAATTAA+TGG + chr1_1:79232573-79232592 Msa0046810:CDS 20.0%
!!! ATAGAATTTTTTCTCCTTTT+TGG + chr1_1:79232693-79232712 Msa0046810:intron 20.0%
!!! TAGAATTTTTTCTCCTTTTT+GGG + chr1_1:79232694-79232713 Msa0046810:intron 20.0%
!!! CAATAAAATGTCCTTTTAAA+TGG + chr1_1:79233040-79233059 Msa0046810:intron 20.0%
!!! TGTTTTTTCTTTTTGTACAT+AGG - chr1_1:79233246-79233265 None:intergenic 20.0%
!! AAAAACAAAAATCAAGATCA+AGG + chr1_1:79233259-79233278 Msa0046810:intron 20.0%
!! GTAAAAATTTATTTAACGCT+AGG - chr1_1:79233991-79234010 None:intergenic 20.0%
!! GGTCTCTATAATAAAAAATA+CGG - chr1_1:79234786-79234805 None:intergenic 20.0%
!!! ATTGTTTCTGAAATTTATTC+TGG + chr1_1:79235009-79235028 Msa0046810:CDS 20.0%
!!! TTAAGTTGATGTTTTATTGT+TGG + chr1_1:79235232-79235251 Msa0046810:intron 20.0%
!!! AATGATACAATATACTTTTC+CGG - chr1_1:79235726-79235745 None:intergenic 20.0%
!! GAAGAAAATATCATAATCAA+TGG - chr1_1:79236268-79236287 None:intergenic 20.0%
!! ATAACATCAAAGATTCAATA+CGG - chr1_1:79236444-79236463 None:intergenic 20.0%
!!! TTATTATTTTGTTACTGTCA+AGG + chr1_1:79236854-79236873 Msa0046810:intron 20.0%
!! AGTATATATAATACATCCAA+AGG - chr1_1:79236909-79236928 None:intergenic 20.0%
!! AAAATACAATAGAAAAAGAG+TGG - chr1_1:79236964-79236983 None:intergenic 20.0%
!!! TACTTAATATTTTTTCCCAA+AGG - chr1_1:79237134-79237153 None:intergenic 20.0%
!! GTATAACCATTATAAATAGA+AGG - chr1_1:79237249-79237268 None:intergenic 20.0%
!! CTAGGAAGTTATAAAATTAA+AGG + chr1_1:79237344-79237363 Msa0046810:intron 20.0%
!! AACTTACAAACAAACTATTA+TGG + chr1_1:79238089-79238108 Msa0046810:intron 20.0%
!!! TTTTTATCATGCATATTTTC+TGG + chr1_1:79238477-79238496 Msa0046810:intron 20.0%
!! GAAATCAATAGAACTATTAT+TGG + chr1_1:79238929-79238948 Msa0046810:intron 20.0%
!! TATCTATCTATTACAAGTAA+TGG - chr1_1:79238986-79239005 None:intergenic 20.0%
!! AAAAATAAGTCATGATAAGA+AGG + chr1_1:79239370-79239389 Msa0046810:CDS 20.0%
!! AAAATAAGTCATGATAAGAA+GGG + chr1_1:79239371-79239390 Msa0046810:CDS 20.0%
!! ATATAAGGGAAAAAAAGTAA+TGG + chr1_1:79239659-79239678 Msa0046810:CDS 20.0%
!! ATTTAGATTTACTTCATTGT+TGG + chr1_1:79239990-79240009 Msa0046810:intron 20.0%
!! TTTATATTCTGTTGAATCAA+AGG - chr1_1:79240118-79240137 None:intergenic 20.0%
!! ATTCAACAGAATATAAAGAT+AGG + chr1_1:79240121-79240140 Msa0046810:CDS 20.0%
!! ATTATGATTAAGATTGATGA+TGG + chr1_1:79240443-79240462 Msa0046810:CDS 20.0%
!! CAATTACCTTTATATTCAAT+CGG - chr1_1:79240567-79240586 None:intergenic 20.0%
!! AATAAATAACAGATAGATAG+AGG + chr1_1:79240713-79240732 Msa0046810:three_prime_UTR 20.0%
!!! TTAAGGAAAAGTTTCTTTTT+TGG - chr1_1:79240917-79240936 None:intergenic 20.0%
! AAACTGAAAGGAGTTAAATT+TGG - chr1_1:79228119-79228138 None:intergenic 25.0%
!!! TTGTTTGTTTTCACTATAAC+TGG + chr1_1:79228270-79228289 Msa0046810:five_prime_UTR 25.0%
!! TTTTGCCAAATTTCATGAAA+GGG - chr1_1:79228581-79228600 None:intergenic 25.0%
!! TTTTTGCCAAATTTCATGAA+AGG - chr1_1:79228582-79228601 None:intergenic 25.0%
!! AATTTTGGATTTTCACTACA+GGG + chr1_1:79228728-79228747 Msa0046810:intron 25.0%
!! GTGATTTTACTTTCATGATT+TGG + chr1_1:79229199-79229218 Msa0046810:intron 25.0%
!!! GTTGTTTTAATAAGCCATAT+CGG + chr1_1:79229413-79229432 Msa0046810:intron 25.0%
! TATCTCACTTCAAAAGAAAA+TGG - chr1_1:79229762-79229781 None:intergenic 25.0%
!! AAACTTGAATATCATTGACT+TGG + chr1_1:79229862-79229881 Msa0046810:intron 25.0%
! TCTTTCTATCATATAGGTAA+TGG + chr1_1:79229909-79229928 Msa0046810:intron 25.0%
! TATAGAAATGATATGCTTGA+TGG + chr1_1:79229981-79230000 Msa0046810:CDS 25.0%
! ATACACGATTTCTTGTATTA+GGG + chr1_1:79230101-79230120 Msa0046810:intron 25.0%
!!! GTTTTGTTCATTTTTTTTGG+AGG + chr1_1:79230181-79230200 Msa0046810:intron 25.0%
! TTTCACCATCGTAATATTTA+AGG - chr1_1:79230278-79230297 None:intergenic 25.0%
!! TTTTACATATGTGTTGAGTT+TGG - chr1_1:79230355-79230374 None:intergenic 25.0%
!! AATGAAAAGCCAAAGATTTT+CGG + chr1_1:79230498-79230517 Msa0046810:CDS 25.0%
! AACTTTAACAAACAACTACA+GGG + chr1_1:79230566-79230585 Msa0046810:intron 25.0%
!! GTATCTTTAGAAGTTATGAT+AGG + chr1_1:79230912-79230931 Msa0046810:intron 25.0%
! ACATGAGATATGATCTAAAT+AGG - chr1_1:79230946-79230965 None:intergenic 25.0%
! AGATTATGTTTAGCTAAAGA+AGG + chr1_1:79231337-79231356 Msa0046810:intron 25.0%
! TCAAAGTGATTATAAGGATA+TGG + chr1_1:79231652-79231671 Msa0046810:CDS 25.0%
!! TAAAATTTTTGCAAGCTCAT+TGG - chr1_1:79231711-79231730 None:intergenic 25.0%
! CTAACATATGTTCTTAATCA+AGG + chr1_1:79231872-79231891 Msa0046810:intron 25.0%
!! AATATCAAAATTTTCCCACT+TGG + chr1_1:79232028-79232047 Msa0046810:intron 25.0%
!!! CATTGATTTTGTTCCATTTT+AGG - chr1_1:79232376-79232395 None:intergenic 25.0%
! CTAAAATGGAACAAAATCAA+TGG + chr1_1:79232374-79232393 Msa0046810:intron 25.0%
! AACATCCAAAATCATTTCAT+CGG - chr1_1:79233097-79233116 None:intergenic 25.0%
! TGTTGAATTTGATTGTTCAA+AGG + chr1_1:79233113-79233132 Msa0046810:CDS 25.0%
! ATTAAACTCTTCGAAACATT+TGG + chr1_1:79233177-79233196 Msa0046810:CDS 25.0%
! TTAAACTCTTCGAAACATTT+GGG + chr1_1:79233178-79233197 Msa0046810:CDS 25.0%
!!! TTAACTGTGGTCATTTTATA+AGG + chr1_1:79233289-79233308 Msa0046810:intron 25.0%
!! AAACATTCTGAAGAATTTGA+AGG - chr1_1:79233430-79233449 None:intergenic 25.0%
! TTCAGAATGTTTCTTCTATA+AGG + chr1_1:79233438-79233457 Msa0046810:intron 25.0%
! TCAGAATGTTTCTTCTATAA+GGG + chr1_1:79233439-79233458 Msa0046810:intron 25.0%
! CTCCAACATCAAAATAAATT+GGG - chr1_1:79233951-79233970 None:intergenic 25.0%
! TCTCCAACATCAAAATAAAT+TGG - chr1_1:79233952-79233971 None:intergenic 25.0%
!!! AATTTATTTTGATGTTGGAG+AGG + chr1_1:79233951-79233970 Msa0046810:CDS 25.0%
! AAGACCATGAATCTAATTTA+AGG + chr1_1:79234220-79234239 Msa0046810:CDS 25.0%
! AGACCATGAATCTAATTTAA+GGG + chr1_1:79234221-79234240 Msa0046810:CDS 25.0%
! ACAATTCAAATTGCATGAAT+GGG - chr1_1:79234431-79234450 None:intergenic 25.0%
! TACAATTCAAATTGCATGAA+TGG - chr1_1:79234432-79234451 None:intergenic 25.0%
! ATAATATTGTCTGCTTCTAA+AGG - chr1_1:79234685-79234704 None:intergenic 25.0%
!!! TTTTTGCCATTCAAAGTATT+CGG + chr1_1:79234818-79234837 Msa0046810:intron 25.0%
!!! CTTTGCTTTTCACATTTTAA+GGG + chr1_1:79234869-79234888 Msa0046810:intron 25.0%
! TCTGTATTTAATCTCAAAGA+TGG + chr1_1:79235089-79235108 Msa0046810:CDS 25.0%
! TATTTATTCTAGTACCTGTT+CGG - chr1_1:79235157-79235176 None:intergenic 25.0%
!!! ATTAATGTGATTTGTTCTGA+AGG + chr1_1:79235209-79235228 Msa0046810:intron 25.0%
!!! CTTTTTTTCAACGGTTTATT+CGG + chr1_1:79235293-79235312 Msa0046810:CDS 25.0%
!!! TTTTTTTCAACGGTTTATTC+GGG + chr1_1:79235294-79235313 Msa0046810:CDS 25.0%
!!! TGATATGATTTTGCTGTTAT+CGG - chr1_1:79235546-79235565 None:intergenic 25.0%
! ATTAACATCAACAACACAAT+TGG - chr1_1:79235669-79235688 None:intergenic 25.0%
! TTACACAATATTTCCAGAAA+AGG + chr1_1:79235825-79235844 Msa0046810:CDS 25.0%
!! AACAAATTATGTACCTTTTC+TGG - chr1_1:79235841-79235860 None:intergenic 25.0%
! CTATATTCATCATTTAGGAA+TGG - chr1_1:79235910-79235929 None:intergenic 25.0%
! GTCAACTATATTCATCATTT+AGG - chr1_1:79235915-79235934 None:intergenic 25.0%
!! TGATATCTTTTCTACATTGT+CGG - chr1_1:79236192-79236211 None:intergenic 25.0%
!!! TATGATATTTTCTTCGAGTT+TGG + chr1_1:79236273-79236292 Msa0046810:intron 25.0%
!! TCTTATACAATCTGATTTTG+TGG + chr1_1:79236531-79236550 Msa0046810:intron 25.0%
!!! AGATTCTGTTTTGAAATATG+CGG + chr1_1:79236689-79236708 Msa0046810:CDS 25.0%
! AAATATCCTAAGAAACATGA+AGG + chr1_1:79236732-79236751 Msa0046810:CDS 25.0%
! AATTGTTAGTAAAAAGCCTT+TGG + chr1_1:79236890-79236909 Msa0046810:intron 25.0%
! TATATATACTAGAGTACAGA+CGG + chr1_1:79236919-79236938 Msa0046810:intron 25.0%
! AGCTCAAATCTATTATTATC+CGG + chr1_1:79237050-79237069 Msa0046810:intron 25.0%
! TATTATTCATAAGTTTGCCA+AGG - chr1_1:79238355-79238374 None:intergenic 25.0%
! CATAAGTTATAAACTCAACA+AGG - chr1_1:79238442-79238461 None:intergenic 25.0%
! GTTAGTTATGGTTATCATTA+AGG + chr1_1:79238776-79238795 Msa0046810:intron 25.0%
!! TGTGTTTGAAACAAAAACAA+CGG - chr1_1:79239164-79239183 None:intergenic 25.0%
! TTTATGTTTCATTGACCATT+TGG + chr1_1:79239602-79239621 Msa0046810:intron 25.0%
! ATTCACAAGTATAAACCAAA+TGG - chr1_1:79239620-79239639 None:intergenic 25.0%
! ATACTTGTGAATTACAGAAA+AGG + chr1_1:79239628-79239647 Msa0046810:intron 25.0%
! TACTTGTGAATTACAGAAAA+GGG + chr1_1:79239629-79239648 Msa0046810:intron 25.0%
! AAAAGGGGAATTTCATATAA+GGG + chr1_1:79239645-79239664 Msa0046810:CDS 25.0%
! AATGAAAATTTCTACAGATG+TGG - chr1_1:79239907-79239926 None:intergenic 25.0%
! TGTATCATGATTTAATGCTT+AGG + chr1_1:79239937-79239956 Msa0046810:intron 25.0%
! ATCAAAATGAATAAAAAGGG+AGG + chr1_1:79240039-79240058 Msa0046810:CDS 25.0%
!! TTTTGTGTCGAAAATAACTT+TGG + chr1_1:79240307-79240326 Msa0046810:CDS 25.0%
! TTTGTGTCGAAAATAACTTT+GGG + chr1_1:79240308-79240327 Msa0046810:CDS 25.0%
! GTCTAAAAGAGATAGATTAT+TGG - chr1_1:79240532-79240551 None:intergenic 25.0%
! TTTATATTCAATCGGTTAGT+TGG - chr1_1:79240559-79240578 None:intergenic 25.0%
! AACTAACCGATTGAATATAA+AGG + chr1_1:79240558-79240577 Msa0046810:three_prime_UTR 25.0%
AACGACAGAAAGTTAAGTTA+AGG - chr1_1:79228179-79228198 None:intergenic 30.0%
AAAAACAAAGCAAAGGTCTT+AGG - chr1_1:79228228-79228247 None:intergenic 30.0%
GGATTTATCAAACGATAACA+TGG + chr1_1:79228344-79228363 Msa0046810:CDS 30.0%
! ATGAATTGGGTTGTTGAAAA+AGG - chr1_1:79228541-79228560 None:intergenic 30.0%
!!! TTTTTGGGTTCATGCAATTT+TGG + chr1_1:79228713-79228732 Msa0046810:intron 30.0%
! CAATTTTGGATTTTCACTAC+AGG + chr1_1:79228727-79228746 Msa0046810:intron 30.0%
! CATTTGAAGTTGCAAAAAAG+AGG + chr1_1:79228763-79228782 Msa0046810:CDS 30.0%
GAGGAATACAATTGCAATTA+TGG + chr1_1:79228782-79228801 Msa0046810:CDS 30.0%
ACAATTGCAATTATGGATAC+AGG + chr1_1:79228789-79228808 Msa0046810:CDS 30.0%
CACACTTGTGAATTGAAAAT+AGG - chr1_1:79228971-79228990 None:intergenic 30.0%
! ATTCACAAGTGTGATCTTTT+TGG + chr1_1:79228978-79228997 Msa0046810:intron 30.0%
! TTACAAGTTGAGGAATACTA+TGG + chr1_1:79229066-79229085 Msa0046810:CDS 30.0%
! TACAAGTTGAGGAATACTAT+GGG + chr1_1:79229067-79229086 Msa0046810:CDS 30.0%
CTTTCCCAGAAAATTACTTT+AGG + chr1_1:79229160-79229179 Msa0046810:intron 30.0%
! GAAGCCTAAAGTAATTTTCT+GGG - chr1_1:79229167-79229186 None:intergenic 30.0%
GTAAAATCACCAATGAACAA+AGG - chr1_1:79229189-79229208 None:intergenic 30.0%
! TCAAATAAGTCGATTCAAAC+AGG + chr1_1:79229539-79229558 Msa0046810:intron 30.0%
!! CTATTTTGAGTAAAGATGGA+TGG - chr1_1:79229652-79229671 None:intergenic 30.0%
! AGCACATTATTGTTATTCTC+TGG + chr1_1:79229679-79229698 Msa0046810:intron 30.0%
! GCACATTATTGTTATTCTCT+GGG + chr1_1:79229680-79229699 Msa0046810:intron 30.0%
! CACATTATTGTTATTCTCTG+GGG + chr1_1:79229681-79229700 Msa0046810:intron 30.0%
! ACATTATTGTTATTCTCTGG+GGG + chr1_1:79229682-79229701 Msa0046810:intron 30.0%
AGTTTATCAGCAAGATTCAT+GGG - chr1_1:79229847-79229866 None:intergenic 30.0%
AAGTTTATCAGCAAGATTCA+TGG - chr1_1:79229848-79229867 None:intergenic 30.0%
AGCATATCATTTCTATACTC+AGG - chr1_1:79229978-79229997 None:intergenic 30.0%
CATACACGATTTCTTGTATT+AGG + chr1_1:79230100-79230119 Msa0046810:intron 30.0%
!!! TTCATTTTTTTTGGAGGGAA+TGG + chr1_1:79230187-79230206 Msa0046810:intron 30.0%
!!! TCATTTTTTTTGGAGGGAAT+GGG + chr1_1:79230188-79230207 Msa0046810:intron 30.0%
CATGACCTTAAATATTACGA+TGG + chr1_1:79230270-79230289 Msa0046810:intron 30.0%
!! AGAGGAGAGATTTTAATGAA+GGG - chr1_1:79230320-79230339 None:intergenic 30.0%
! ATGAAAAGCCAAAGATTTTC+GGG + chr1_1:79230499-79230518 Msa0046810:CDS 30.0%
! CTGTAGTTGTTTGTTAAAGT+TGG - chr1_1:79230567-79230586 None:intergenic 30.0%
CAACTTTAACAAACAACTAC+AGG + chr1_1:79230565-79230584 Msa0046810:intron 30.0%
TGCAAATCATGATCATAAAG+AGG + chr1_1:79230696-79230715 Msa0046810:intron 30.0%
TGAAAAGAAACAAAGCTTGA+CGG - chr1_1:79230845-79230864 None:intergenic 30.0%
! TACTTGAAAAGTACATTTGC+AGG - chr1_1:79231022-79231041 None:intergenic 30.0%
AAACCACTATTTATCCCATT+AGG + chr1_1:79231047-79231066 Msa0046810:intron 30.0%
AAAAATCCTTCAAGTAAGAG+AGG - chr1_1:79231101-79231120 None:intergenic 30.0%
ATTAGGTGTTTCTTCTACTT+TGG + chr1_1:79231212-79231231 Msa0046810:intron 30.0%
ATCAGATCTTGAAAACATCT+TGG + chr1_1:79231251-79231270 Msa0046810:CDS 30.0%
GTTTAGCTAAAGAAGGTAAA+TGG + chr1_1:79231344-79231363 Msa0046810:intron 30.0%
AGAGTTACGTTGTTAAAGAT+CGG + chr1_1:79231379-79231398 Msa0046810:intron 30.0%
CTTGTATATAGCCATATACA+TGG - chr1_1:79231529-79231548 None:intergenic 30.0%
AGGATATGGACCAAAAATTT+AGG + chr1_1:79231666-79231685 Msa0046810:CDS 30.0%
GGATATGGACCAAAAATTTA+GGG + chr1_1:79231667-79231686 Msa0046810:CDS 30.0%
TTATATTGCCTTGAAGATCT+TGG + chr1_1:79231728-79231747 Msa0046810:CDS 30.0%
TCATCAACTTTGTGACATTA+TGG + chr1_1:79231774-79231793 Msa0046810:intron 30.0%
CATTCAATTGTTTGATCCAA+AGG - chr1_1:79232419-79232438 None:intergenic 30.0%
CTTTGGATCAAACAATTGAA+TGG + chr1_1:79232417-79232436 Msa0046810:intron 30.0%
ACAATTGAATGGATGAGATT+TGG + chr1_1:79232428-79232447 Msa0046810:intron 30.0%
TCAAAGTTAACTTTGACAAC+TGG + chr1_1:79232453-79232472 Msa0046810:intron 30.0%
! TTCACACTCTCCATTAATTT+TGG - chr1_1:79232586-79232605 None:intergenic 30.0%
GATAGTTACACACTGAAAAT+TGG - chr1_1:79232622-79232641 None:intergenic 30.0%
ATACATCAACAAAAGCAATC+TGG + chr1_1:79232952-79232971 Msa0046810:intron 30.0%
GAAACACATATACTGTACAT+AGG - chr1_1:79232993-79233012 None:intergenic 30.0%
GAATAAGCAAGCCATTTAAA+AGG - chr1_1:79233054-79233073 None:intergenic 30.0%
! TTTTTGTACATAGGACCAAA+GGG - chr1_1:79233237-79233256 None:intergenic 30.0%
! GGTTTTTACTAAAGTAACCT+TGG + chr1_1:79233310-79233329 Msa0046810:intron 30.0%
TGTGAAAACATTTAATGCCA+AGG - chr1_1:79233330-79233349 None:intergenic 30.0%
TGATTCTTTCAACAAAGATG+AGG - chr1_1:79233549-79233568 None:intergenic 30.0%
TGAAAGAATCATTACAGCAA+AGG + chr1_1:79233558-79233577 Msa0046810:CDS 30.0%
TTACCAAATACATACCTTTC+CGG - chr1_1:79233713-79233732 None:intergenic 30.0%
ATTTACAACTGATGTACTTG+AGG + chr1_1:79233823-79233842 Msa0046810:CDS 30.0%
ATATAACTACAAACTGTCGT+GGG - chr1_1:79233896-79233915 None:intergenic 30.0%
!!! CTCCCAATTTATTTTGATGT+TGG + chr1_1:79233946-79233965 Msa0046810:CDS 30.0%
!! ATATTCACTAAGAGTATTCG+GGG - chr1_1:79234057-79234076 None:intergenic 30.0%
!! GATATTCACTAAGAGTATTC+GGG - chr1_1:79234058-79234077 None:intergenic 30.0%
!! GGATATTCACTAAGAGTATT+CGG - chr1_1:79234059-79234078 None:intergenic 30.0%
! AACGATTGACTTATATCTAC+AGG + chr1_1:79234121-79234140 Msa0046810:intron 30.0%
! ACGATTGACTTATATCTACA+GGG + chr1_1:79234122-79234141 Msa0046810:intron 30.0%
TTGATTTATAAGACTGACAC+TGG - chr1_1:79234313-79234332 None:intergenic 30.0%
! AAAAAGTACACAGGCATAAT+AGG - chr1_1:79234374-79234393 None:intergenic 30.0%
! CAGTTAGAAAAAAAGTACAC+AGG - chr1_1:79234383-79234402 None:intergenic 30.0%
!!! CTGTGTACTTTTTTTCTAAC+TGG + chr1_1:79234381-79234400 Msa0046810:intron 30.0%
TGAATTGTATTCTATGACGT+AGG + chr1_1:79234443-79234462 Msa0046810:intron 30.0%
TCTAAAGGATCTTCAATGAA+AGG - chr1_1:79234670-79234689 None:intergenic 30.0%
!! GCTTTGCTTTTCACATTTTA+AGG + chr1_1:79234868-79234887 Msa0046810:intron 30.0%
!! TTTATTGTTGGTTCTCTTCT+AGG + chr1_1:79235244-79235263 Msa0046810:intron 30.0%
!!! TTCCATGAGCTTTTTTTCAA+CGG + chr1_1:79235284-79235303 Msa0046810:CDS 30.0%
!!! AGAAGCAAATACGAGTTTTT+TGG - chr1_1:79235398-79235417 None:intergenic 30.0%
! ATATCATTTGACTTCTCAAG+TGG - chr1_1:79235422-79235441 None:intergenic 30.0%
TGTGAAAGATAATGTAGCTT+TGG + chr1_1:79235691-79235710 Msa0046810:CDS 30.0%
! ATATACTTTTCCGGTATGAA+TGG - chr1_1:79235717-79235736 None:intergenic 30.0%
CCATAAGATTGAAAACAGTT+AGG - chr1_1:79236064-79236083 None:intergenic 30.0%
! CCTAACTGTTTTCAATCTTA+TGG + chr1_1:79236061-79236080 Msa0046810:intron 30.0%
TAATCCAATGACAAGTTCAA+GGG - chr1_1:79236100-79236119 None:intergenic 30.0%
ATAATCCAATGACAAGTTCA+AGG - chr1_1:79236101-79236120 None:intergenic 30.0%
! CATCTCTTTTAACATCAAGA+AGG - chr1_1:79236384-79236403 None:intergenic 30.0%
! ATGCTGTGAAAAGTTTTCTA+TGG + chr1_1:79236647-79236666 Msa0046810:CDS 30.0%
ATATATACTAGAGTACAGAC+GGG + chr1_1:79236920-79236939 Msa0046810:intron 30.0%
TTATTGTGAGAAATCCCAAA+AGG + chr1_1:79237010-79237029 Msa0046810:intron 30.0%
! TCCACATATTAAGTCCTTTT+GGG - chr1_1:79237027-79237046 None:intergenic 30.0%
! ATCCACATATTAAGTCCTTT+TGG - chr1_1:79237028-79237047 None:intergenic 30.0%
CAGTAGACTCAATTGATTAT+TGG - chr1_1:79237078-79237097 None:intergenic 30.0%
ATGAAGATTCAATAGCCTTT+GGG + chr1_1:79237116-79237135 Msa0046810:intron 30.0%
TTAAGTAATTCATTAGGTGC+AGG + chr1_1:79237147-79237166 Msa0046810:intron 30.0%
TCACACCCTTCTATTTATAA+TGG + chr1_1:79237240-79237259 Msa0046810:intron 30.0%
GGAGTAATAACAATCAATCT+AGG + chr1_1:79237326-79237345 Msa0046810:intron 30.0%
!! TTACTTTTGGCATATATGTG+TGG - chr1_1:79237788-79237807 None:intergenic 30.0%
! AGAATTATTTAGGATCCGTT+TGG + chr1_1:79237948-79237967 Msa0046810:intron 30.0%
AATAAGCTGAAAACAGCATA+TGG - chr1_1:79238050-79238069 None:intergenic 30.0%
CACTTACGTAATAAGTGATT+AGG + chr1_1:79238173-79238192 Msa0046810:intron 30.0%
AAGCGCTTAATTAATCTGTA+AGG + chr1_1:79238200-79238219 Msa0046810:intron 30.0%
AGCGCTTAATTAATCTGTAA+GGG + chr1_1:79238201-79238220 Msa0046810:intron 30.0%
TAAACATAAGCCAATCCAAA+CGG - chr1_1:79238228-79238247 None:intergenic 30.0%
AGAAAATAAGCCAATCCAAA+CGG + chr1_1:79238403-79238422 Msa0046810:intron 30.0%
CTTTCGCATATTCTAATATC+TGG - chr1_1:79238700-79238719 None:intergenic 30.0%
TGATAACCATAACTAACCTT+AGG - chr1_1:79238773-79238792 None:intergenic 30.0%
! CTCTCATGTTTTGTATAGAA+TGG + chr1_1:79238874-79238893 Msa0046810:intron 30.0%
AAACAAACAAGCCTTAATTG+TGG - chr1_1:79239056-79239075 None:intergenic 30.0%
!!! GTTGTTTTTGTTTCAAACAC+AGG + chr1_1:79239163-79239182 Msa0046810:intron 30.0%
!!! AGTTTTTCAGGAGTAACAAT+TGG - chr1_1:79239287-79239306 None:intergenic 30.0%
AATTGCATTAATTCACGCAA+TGG - chr1_1:79239320-79239339 None:intergenic 30.0%
!!! CCTTTCGCAGATTTTTTATT+TGG - chr1_1:79239464-79239483 None:intergenic 30.0%
CCAAATAAAAAATCTGCGAA+AGG + chr1_1:79239461-79239480 Msa0046810:CDS 30.0%
ATTCTCTTCTGAATGTATTC+TGG + chr1_1:79239525-79239544 Msa0046810:intron 30.0%
ACTTGTGAATTACAGAAAAG+GGG + chr1_1:79239630-79239649 Msa0046810:intron 30.0%
GAAAAGGGGAATTTCATATA+AGG + chr1_1:79239644-79239663 Msa0046810:intron 30.0%
!!! TTTTAATTGCTACTGGCTTT+GGG - chr1_1:79239722-79239741 None:intergenic 30.0%
!!! TTTTTAATTGCTACTGGCTT+TGG - chr1_1:79239723-79239742 None:intergenic 30.0%
AGCAATTAAAAAGCCCAAAT+TGG + chr1_1:79239731-79239750 Msa0046810:CDS 30.0%
!!! GAGTTAGTTTTGTCCAATTT+GGG - chr1_1:79239747-79239766 None:intergenic 30.0%
!!! TGAGTTAGTTTTGTCCAATT+TGG - chr1_1:79239748-79239767 None:intergenic 30.0%
!! GATGTGGATTTTGTTTCATT+CGG - chr1_1:79239891-79239910 None:intergenic 30.0%
TATTCTGTTGAATCAAAGGA+AGG - chr1_1:79240114-79240133 None:intergenic 30.0%
TCTCTATTTGAATCGTGTAA+AGG + chr1_1:79240257-79240276 Msa0046810:CDS 30.0%
CTCTATTTGAATCGTGTAAA+GGG + chr1_1:79240258-79240277 Msa0046810:CDS 30.0%
! CATTTTATATCACCATAACC+TGG - chr1_1:79240338-79240357 None:intergenic 30.0%
TATGGTGATATAAAATGCCA+AGG + chr1_1:79240341-79240360 Msa0046810:CDS 30.0%
! TCTAATTTGCAGCAATTCAA+AGG - chr1_1:79240593-79240612 None:intergenic 30.0%
TAGAGAGAAGTGAAACTGAA+AGG - chr1_1:79228131-79228150 None:intergenic 35.0%
CTTGTTCTTCATCTTTCTCA+TGG + chr1_1:79228323-79228342 Msa0046810:exon 35.0%
CGATAACATGGATTCAATCA+TGG + chr1_1:79228356-79228375 Msa0046810:CDS 35.0%
GGAGAATCTTGTTCAACATT+GGG - chr1_1:79228456-79228475 None:intergenic 35.0%
TGGAGAATCTTGTTCAACAT+TGG - chr1_1:79228457-79228476 None:intergenic 35.0%
GTTGAAAAAGGAGAGAGAAA+AGG - chr1_1:79228529-79228548 None:intergenic 35.0%
TTTGGCCCTTTCATGAAATT+TGG + chr1_1:79228573-79228592 Msa0046810:intron 35.0%
GATTGCTATACTGCTTATCA+AGG + chr1_1:79228827-79228846 Msa0046810:CDS 35.0%
GAACACAGATTTACAAGTTG+AGG + chr1_1:79229056-79229075 Msa0046810:CDS 35.0%
ATTCCATGTATCAACTCCTT+TGG - chr1_1:79229094-79229113 None:intergenic 35.0%
ATACATGGAATTTGAAGAGC+TGG + chr1_1:79229103-79229122 Msa0046810:CDS 35.0%
! GGAAGCCTAAAGTAATTTTC+TGG - chr1_1:79229168-79229187 None:intergenic 35.0%
TTTAGGCTTCCTTTGTTCAT+TGG + chr1_1:79229177-79229196 Msa0046810:intron 35.0%
! AATACTTGTAGCCTTTTCCT+TGG + chr1_1:79229609-79229628 Msa0046810:intron 35.0%
!!! TCAGGAATCTGTATTTTGAC+TGG + chr1_1:79229725-79229744 Msa0046810:intron 35.0%
! TATGACACCTCAGATTCTTT+TGG + chr1_1:79229933-79229952 Msa0046810:CDS 35.0%
TGGTTATTGATGAGTGTCAT+TGG + chr1_1:79230001-79230020 Msa0046810:CDS 35.0%
! GGTTATTGATGAGTGTCATT+GGG + chr1_1:79230002-79230021 Msa0046810:CDS 35.0%
!!! CCATTATTTTTGCATAGGGA+TGG - chr1_1:79230038-79230057 None:intergenic 35.0%
CCATCCCTATGCAAAAATAA+TGG + chr1_1:79230035-79230054 Msa0046810:CDS 35.0%
TCCCTATGCAAAAATAATGG+CGG + chr1_1:79230038-79230057 Msa0046810:CDS 35.0%
!!! ACCGCCATTATTTTTGCATA+GGG - chr1_1:79230042-79230061 None:intergenic 35.0%
TTCTTGTATTAGGGTCTGTT+TGG + chr1_1:79230110-79230129 Msa0046810:intron 35.0%
!!! CTGTTTGGTTTTGAAGGAAA+TGG + chr1_1:79230125-79230144 Msa0046810:intron 35.0%
!!! CATTTTTTTTGGAGGGAATG+GGG + chr1_1:79230189-79230208 Msa0046810:intron 35.0%
!!! ATTTTTTTTGGAGGGAATGG+GGG + chr1_1:79230190-79230209 Msa0046810:intron 35.0%
!! GAGGAGAGATTTTAATGAAG+GGG - chr1_1:79230319-79230338 None:intergenic 35.0%
!! GAGAGGAGAGATTTTAATGA+AGG - chr1_1:79230321-79230340 None:intergenic 35.0%
!! GGAGAGATTTTAATGGAGAA+GGG - chr1_1:79230383-79230402 None:intergenic 35.0%
!!! TCTTTGGCTTTTCATTAGCT+TGG - chr1_1:79230494-79230513 None:intergenic 35.0%
! ACATTACCTCTTTTACCAAC+TGG - chr1_1:79230537-79230556 None:intergenic 35.0%
!!! ACAACTACAGGGTTTTAAAG+AGG + chr1_1:79230577-79230596 Msa0046810:intron 35.0%
!! GCTTTAAAGTATCTCAAGTC+TGG - chr1_1:79230724-79230743 None:intergenic 35.0%
ATTCACTGAAATTGCAGCAA+TGG - chr1_1:79230779-79230798 None:intergenic 35.0%
!! TTCTTCTACTTTGGTTTGTG+AGG + chr1_1:79231221-79231240 Msa0046810:CDS 35.0%
!! TCTTCTACTTTGGTTTGTGA+GGG + chr1_1:79231222-79231241 Msa0046810:CDS 35.0%
TGAAAACATCTTGGATTCTC+AGG + chr1_1:79231260-79231279 Msa0046810:CDS 35.0%
TTACGTTGTTAAAGATCGGA+CGG + chr1_1:79231383-79231402 Msa0046810:CDS 35.0%
! TACAACTCTCTTTTGCAGAT+GGG - chr1_1:79231425-79231444 None:intergenic 35.0%
AGCCAAAAATTGAAGCTTTG+TGG + chr1_1:79231484-79231503 Msa0046810:CDS 35.0%
! GACCACAAAGCTTCAATTTT+TGG - chr1_1:79231489-79231508 None:intergenic 35.0%
ATTTGTGGGTTCCATGTATA+TGG + chr1_1:79231515-79231534 Msa0046810:intron 35.0%
! GATGCAATGCCCTAAATTTT+TGG - chr1_1:79231679-79231698 None:intergenic 35.0%
! GAGACTAGTGAATGTGTTTT+TGG + chr1_1:79232305-79232324 Msa0046810:intron 35.0%
AATGAGTAAATGCAGACCTT+TGG + chr1_1:79232400-79232419 Msa0046810:intron 35.0%
!! TAATGCGTTTTTGTTTGTGC+AGG + chr1_1:79232533-79232552 Msa0046810:intron 35.0%
!!! CACACTGAAAATTGGCTTTT+CGG - chr1_1:79232614-79232633 None:intergenic 35.0%
!! TTTTCTCCTTTTTGGGCTTT+TGG + chr1_1:79232701-79232720 Msa0046810:intron 35.0%
CTGTACATAGGAACATCTAT+TGG - chr1_1:79232981-79233000 None:intergenic 35.0%
! CAGTATATGTGTTTCTGACT+TGG + chr1_1:79232998-79233017 Msa0046810:intron 35.0%
! CTTTTTGTACATAGGACCAA+AGG - chr1_1:79233238-79233257 None:intergenic 35.0%
AACTGTGAGATGAGATATCT+GGG - chr1_1:79233611-79233630 None:intergenic 35.0%
TGTATTGCTTCCAGTTACAT+AGG - chr1_1:79233635-79233654 None:intergenic 35.0%
TAAGAGGCAGAAAGAGATAT+TGG + chr1_1:79233675-79233694 Msa0046810:CDS 35.0%
ATATTGGATTCTTTCCGATC+CGG + chr1_1:79233691-79233710 Msa0046810:CDS 35.0%
AAATACATACCTTTCCGGAT+CGG - chr1_1:79233708-79233727 None:intergenic 35.0%
TATAACTACAAACTGTCGTG+GGG - chr1_1:79233895-79233914 None:intergenic 35.0%
GATATAACTACAAACTGTCG+TGG - chr1_1:79233897-79233916 None:intergenic 35.0%
TGTAGTTATATCCAATCTCG+TGG + chr1_1:79233905-79233924 Msa0046810:CDS 35.0%
!! TATTCACTAAGAGTATTCGG+GGG - chr1_1:79234056-79234075 None:intergenic 35.0%
! CGATTGACTTATATCTACAG+GGG + chr1_1:79234123-79234142 Msa0046810:intron 35.0%
ATCAGCTGTTTGACATAATC+AGG + chr1_1:79234163-79234182 Msa0046810:CDS 35.0%
ACGCCCTTAAATTAGATTCA+TGG - chr1_1:79234227-79234246 None:intergenic 35.0%
!! ATTTAAGGGCGTTTACTGTA+AGG + chr1_1:79234235-79234254 Msa0046810:CDS 35.0%
GAAAACAGAATCATACTGTG+TGG + chr1_1:79234257-79234276 Msa0046810:CDS 35.0%
ATAGGCAGCGATTCAAAATT+GGG - chr1_1:79234484-79234503 None:intergenic 35.0%
TTGTAAGAAGCTGCATCAAA+TGG + chr1_1:79234621-79234640 Msa0046810:CDS 35.0%
TGTAAGAAGCTGCATCAAAT+GGG + chr1_1:79234622-79234641 Msa0046810:CDS 35.0%
AGGAACAAGATGGTCATTTA+AGG - chr1_1:79234650-79234669 None:intergenic 35.0%
CTTCAATGAAAGGAACAAGA+TGG - chr1_1:79234660-79234679 None:intergenic 35.0%
TGGCAAAAACAAACATTTGC+AGG - chr1_1:79234807-79234826 None:intergenic 35.0%
GAGTAACCGAATACTTTGAA+TGG - chr1_1:79234827-79234846 None:intergenic 35.0%
ACGAAAAGAAAGGAGTTACA+CGG + chr1_1:79234895-79234914 Msa0046810:CDS 35.0%
TTATTCTGGATTCGTTCTTC+TGG + chr1_1:79235023-79235042 Msa0046810:CDS 35.0%
!! TCAAAGCTTGATGATGATGT+GGG + chr1_1:79235051-79235070 Msa0046810:CDS 35.0%
! AAGACTTCTGTCATTTCATG+TGG + chr1_1:79235114-79235133 Msa0046810:CDS 35.0%
AACCGTTGAAAAAAAGCTCA+TGG - chr1_1:79235289-79235308 None:intergenic 35.0%
AGAAAGACACAGAACTATTG+TGG + chr1_1:79235369-79235388 Msa0046810:CDS 35.0%
TCAGATCTTTGCAGATACAT+TGG + chr1_1:79235447-79235466 Msa0046810:CDS 35.0%
CTTCTGCTATTGCATTTGTT+AGG + chr1_1:79235489-79235508 Msa0046810:CDS 35.0%
TTGTGATACCAGTTCATCAT+CGG + chr1_1:79235607-79235626 Msa0046810:CDS 35.0%
AAGTGAGAGAGAGAAAACAA+CGG - chr1_1:79235876-79235895 None:intergenic 35.0%
TTCATCATTTAGGAATGGCA+GGG - chr1_1:79235905-79235924 None:intergenic 35.0%
ATTCATCATTTAGGAATGGC+AGG - chr1_1:79235906-79235925 None:intergenic 35.0%
CAACAAGCTGTAATCATTAG+CGG + chr1_1:79236155-79236174 Msa0046810:intron 35.0%
!!! TTTTCTACATTGTCGGCTTT+AGG - chr1_1:79236185-79236204 None:intergenic 35.0%
! AACATGTACAGGAACTTTTG+GGG - chr1_1:79236338-79236357 None:intergenic 35.0%
! GAACATGTACAGGAACTTTT+GGG - chr1_1:79236339-79236358 None:intergenic 35.0%
! TGAACATGTACAGGAACTTT+TGG - chr1_1:79236340-79236359 None:intergenic 35.0%
TCAATACGGTACATAAGAGA+TGG - chr1_1:79236430-79236449 None:intergenic 35.0%
AAGTGTCCTTCATGTTTCTT+AGG - chr1_1:79236741-79236760 None:intergenic 35.0%
TCCCAAAAGGACTTAATATG+TGG + chr1_1:79237023-79237042 Msa0046810:intron 35.0%
ACTCAATTGATTATTGGCAC+CGG - chr1_1:79237072-79237091 None:intergenic 35.0%
ATTGAGTCTACTGAAGTTGA+AGG + chr1_1:79237085-79237104 Msa0046810:intron 35.0%
GATGAAGATTCAATAGCCTT+TGG + chr1_1:79237115-79237134 Msa0046810:intron 35.0%
TATTTATTGAGCACTAACCC+CGG + chr1_1:79237288-79237307 Msa0046810:intron 35.0%
!! TACATCTAAAGGCACTTCTA+AGG - chr1_1:79237544-79237563 None:intergenic 35.0%
GTGTGGAACTTTACATCTAA+AGG - chr1_1:79237555-79237574 None:intergenic 35.0%
! AACTTTCCAACCACAACTTT+TGG - chr1_1:79237585-79237604 None:intergenic 35.0%
CTTCACTTCACATGATGAAA+TGG + chr1_1:79237700-79237719 Msa0046810:CDS 35.0%
! CTGGCAATCTCATTTACTTT+TGG - chr1_1:79237801-79237820 None:intergenic 35.0%
! TGGATACGAATTTTCTGTCA+AGG + chr1_1:79237836-79237855 Msa0046810:CDS 35.0%
! GGATACGAATTTTCTGTCAA+GGG + chr1_1:79237837-79237856 Msa0046810:CDS 35.0%
! TATTTAGGATCCGTTTGGAT+TGG + chr1_1:79237953-79237972 Msa0046810:intron 35.0%
ACTCAATAAGCCAATCCAAA+CGG - chr1_1:79237966-79237985 None:intergenic 35.0%
GGCTTATTGAGTTTATCTAC+TGG + chr1_1:79237974-79237993 Msa0046810:intron 35.0%
!!! TGTTTTTTCATTCACCACCT+TGG + chr1_1:79238335-79238354 Msa0046810:intron 35.0%
TATTCATAAGTTTGCCAAGG+TGG - chr1_1:79238352-79238371 None:intergenic 35.0%
GAAAATAAGCCAATCCAAAC+GGG + chr1_1:79238404-79238423 Msa0046810:intron 35.0%
ACTCAACAAGGCTGTATTTA+GGG - chr1_1:79238430-79238449 None:intergenic 35.0%
AACTCAACAAGGCTGTATTT+AGG - chr1_1:79238431-79238450 None:intergenic 35.0%
! AAAGCTCCTAAGGTTAGTTA+TGG + chr1_1:79238764-79238783 Msa0046810:intron 35.0%
!! ATCTAGTAGAGAGTATTGCT+GGG + chr1_1:79239195-79239214 Msa0046810:CDS 35.0%
TACAAAATATCCGAGAGAGT+CGG - chr1_1:79239345-79239364 None:intergenic 35.0%
TGGTCTTCAATTTGACAACT+GGG - chr1_1:79239696-79239715 None:intergenic 35.0%
! TTGGTCTTCAATTTGACAAC+TGG - chr1_1:79239697-79239716 None:intergenic 35.0%
!! TTTAATTGCTACTGGCTTTG+GGG - chr1_1:79239721-79239740 None:intergenic 35.0%
!! TTGGGCTTTTTAATTGCTAC+TGG - chr1_1:79239729-79239748 None:intergenic 35.0%
AATAGAACCACTAGTATCAG+AGG - chr1_1:79239817-79239836 None:intergenic 35.0%
CAAACTCAGAACGAAATTGT+CGG - chr1_1:79239851-79239870 None:intergenic 35.0%
TCTTGGTACAAATGTGTTAG+CGG - chr1_1:79240152-79240171 None:intergenic 35.0%
! TTACTACATGTCACGTTTTG+TGG + chr1_1:79240187-79240206 Msa0046810:intron 35.0%
AAAATAACTTTGGGCATACC+AGG + chr1_1:79240317-79240336 Msa0046810:CDS 35.0%
! ATATTCAATCGGTTAGTTGG+TGG - chr1_1:79240556-79240575 None:intergenic 35.0%
ATGAGGGTTTCTTCTTGAGA+TGG - chr1_1:79228477-79228496 None:intergenic 40.0%
! AAACCTTCTAGGAACCAAGT+TGG - chr1_1:79228502-79228521 None:intergenic 40.0%
GAAAAGGAAGCAAACCTTCT+AGG - chr1_1:79228513-79228532 None:intergenic 40.0%
! TTTTCACTACAGGGATCAGT+TGG + chr1_1:79228737-79228756 Msa0046810:intron 40.0%
GCAATTATGGATACAGGTTC+AGG + chr1_1:79228795-79228814 Msa0046810:CDS 40.0%
ATACTGCTTATCAAGGAGAC+TGG + chr1_1:79228834-79228853 Msa0046810:CDS 40.0%
TGATTCACAAGGTGAACAGT+GGG - chr1_1:79228909-79228928 None:intergenic 40.0%
AACAACATGCCTGATTCACA+AGG - chr1_1:79228920-79228939 None:intergenic 40.0%
!! TGGAGTATTGATTGCTCTCT+AGG + chr1_1:79229219-79229238 Msa0046810:intron 40.0%
!! GGAGTATTGATTGCTCTCTA+GGG + chr1_1:79229220-79229239 Msa0046810:intron 40.0%
TTTCCACAAACTCTCCGATA+TGG - chr1_1:79229430-79229449 None:intergenic 40.0%
! AAGGCATCCAAAAGAATCTG+AGG - chr1_1:79229943-79229962 None:intergenic 40.0%
! ACTCAGGAATGCTTTTCTGA+AGG - chr1_1:79229962-79229981 None:intergenic 40.0%
!!! CACCGCCATTATTTTTGCAT+AGG - chr1_1:79230043-79230062 None:intergenic 40.0%
!!! TAGGGTCTGTTTGGTTTTGA+AGG + chr1_1:79230119-79230138 Msa0046810:intron 40.0%
!!! TGGTTTTGAAGGAAATGGAG+AGG + chr1_1:79230130-79230149 Msa0046810:intron 40.0%
!! TTTTGAAGGAAATGGAGAGG+AGG + chr1_1:79230133-79230152 Msa0046810:intron 40.0%
TTTGAAGGAAATGGAGAGGA+GGG + chr1_1:79230134-79230153 Msa0046810:intron 40.0%
! GTTGAGTTTGGTTCGACAAT+GGG - chr1_1:79230343-79230362 None:intergenic 40.0%
! TGTTGAGTTTGGTTCGACAA+TGG - chr1_1:79230344-79230363 None:intergenic 40.0%
!! GGGAGAGATTTTAATGGAGA+AGG - chr1_1:79230384-79230403 None:intergenic 40.0%
! GGAGAAGGGAGAGATTTTAA+TGG - chr1_1:79230390-79230409 None:intergenic 40.0%
! TCTGTCTAGTTCAACTGAAG+CGG - chr1_1:79230412-79230431 None:intergenic 40.0%
ATGAGCTTCATCAGAACGTA+GGG - chr1_1:79231073-79231092 None:intergenic 40.0%
AATGAGCTTCATCAGAACGT+AGG - chr1_1:79231074-79231093 None:intergenic 40.0%
TTGCTTCCTCTCTTACTTGA+AGG + chr1_1:79231092-79231111 Msa0046810:intron 40.0%
TAATCTCGCATGTGCATTGT+TGG - chr1_1:79231323-79231342 None:intergenic 40.0%
! CTACAACTCTCTTTTGCAGA+TGG - chr1_1:79231426-79231445 None:intergenic 40.0%
GAGTTGTAGATTCTATGACC+CGG + chr1_1:79231437-79231456 Msa0046810:CDS 40.0%
! AATTGAAGCTTTGTGGTCGA+AGG + chr1_1:79231491-79231510 Msa0046810:CDS 40.0%
!! TTTGTGGTCGAAGGTATTTG+TGG + chr1_1:79231500-79231519 Msa0046810:intron 40.0%
!! TTGTGGTCGAAGGTATTTGT+GGG + chr1_1:79231501-79231520 Msa0046810:intron 40.0%
!! AATTTAGGGCATTGCATCAG+CGG + chr1_1:79231681-79231700 Msa0046810:CDS 40.0%
ACAACAGTCCAAGATCTTCA+AGG - chr1_1:79231739-79231758 None:intergenic 40.0%
ATTGAAGAATCCCTCCATCT+TGG + chr1_1:79232663-79232682 Msa0046810:CDS 40.0%
ATTCTATATGCGCACCAAGA+TGG - chr1_1:79232680-79232699 None:intergenic 40.0%
AAAGGACCAAAAGCCCAAAA+AGG - chr1_1:79232710-79232729 None:intergenic 40.0%
! TGCAGCCGATGAAATGATTT+TGG + chr1_1:79233089-79233108 Msa0046810:intron 40.0%
TTGTTCAAAGGCAGTAGACA+TGG + chr1_1:79233125-79233144 Msa0046810:CDS 40.0%
TGTTCAAAGGCAGTAGACAT+GGG + chr1_1:79233126-79233145 Msa0046810:CDS 40.0%
CTGTAAAACTGTACTCCCTT+TGG + chr1_1:79233219-79233238 Msa0046810:intron 40.0%
TCAAGGAGACTCATTAACTG+TGG + chr1_1:79233276-79233295 Msa0046810:intron 40.0%
TTTCTTCTATAAGGGACCAG+TGG + chr1_1:79233447-79233466 Msa0046810:intron 40.0%
TTCTTCTATAAGGGACCAGT+GGG + chr1_1:79233448-79233467 Msa0046810:intron 40.0%
ATGAGGCACAATAACTGACT+AGG - chr1_1:79233532-79233551 None:intergenic 40.0%
CAACTGTGAGATGAGATATC+TGG - chr1_1:79233612-79233631 None:intergenic 40.0%
! GATCCGGAAAGGTATGTATT+TGG + chr1_1:79233707-79233726 Msa0046810:intron 40.0%
ACAACTGATGTACTTGAGGA+AGG + chr1_1:79233827-79233846 Msa0046810:CDS 40.0%
AGAAATCTCCTGCATCAAAC+AGG - chr1_1:79234027-79234046 None:intergenic 40.0%
!! ATTCACTAAGAGTATTCGGG+GGG - chr1_1:79234055-79234074 None:intergenic 40.0%
TATGTGTGTGTGAGCTTATG+TGG - chr1_1:79234087-79234106 None:intergenic 40.0%
ACTAACAGCTGCATCATTCA+TGG - chr1_1:79234199-79234218 None:intergenic 40.0%
TCATACTGTGTGGATTCTAC+CGG + chr1_1:79234267-79234286 Msa0046810:CDS 40.0%
TCTACTCTTACTTGTCTCGT+GGG - chr1_1:79234350-79234369 None:intergenic 40.0%
ATCTACTCTTACTTGTCTCG+TGG - chr1_1:79234351-79234370 None:intergenic 40.0%
TTCAAAATTGGGCTTTGCAG+AGG - chr1_1:79234473-79234492 None:intergenic 40.0%
CATAGGCAGCGATTCAAAAT+TGG - chr1_1:79234485-79234504 None:intergenic 40.0%
! CAATTTTGAATCGCTGCCTA+TGG + chr1_1:79234483-79234502 Msa0046810:CDS 40.0%
AGTACTTGGAAAGCTGCATT+AGG - chr1_1:79234544-79234563 None:intergenic 40.0%
! TGTCGAACATCTTTTCCTGA+AGG - chr1_1:79234574-79234593 None:intergenic 40.0%
TTCAGGAAAAGATGTTCGAC+AGG + chr1_1:79234573-79234592 Msa0046810:CDS 40.0%
TTAAGGGACCACGAAAAGAA+AGG + chr1_1:79234885-79234904 Msa0046810:intron 40.0%
! GTGTAACTCCTTTCTTTTCG+TGG - chr1_1:79234896-79234915 None:intergenic 40.0%
TTCAGGCATTATGTGGTTCA+TGG + chr1_1:79234929-79234948 Msa0046810:CDS 40.0%
TCAGGCATTATGTGGTTCAT+GGG + chr1_1:79234930-79234949 Msa0046810:CDS 40.0%
!! GTCAAAGCTTGATGATGATG+TGG + chr1_1:79235050-79235069 Msa0046810:CDS 40.0%
TTCATGTGGCCAAGTAGATT+TGG + chr1_1:79235128-79235147 Msa0046810:CDS 40.0%
GTAAAAATTCCCTTTCCCCT+TGG - chr1_1:79235346-79235365 None:intergenic 40.0%
! CTGCTATTGCATTTGTTAGG+CGG + chr1_1:79235492-79235511 Msa0046810:CDS 40.0%
! TTGCTGTTATCGGTATCACA+TGG - chr1_1:79235572-79235591 None:intergenic 40.0%
GATGATGAACTGGTATCACA+AGG - chr1_1:79235608-79235627 None:intergenic 40.0%
TACCAGTTCATCATCGGATA+TGG + chr1_1:79235613-79235632 Msa0046810:CDS 40.0%
TTCCATATCCGATGATGAAC+TGG - chr1_1:79235618-79235637 None:intergenic 40.0%
TTGTCATTGTTCCCGTCAAA+AGG - chr1_1:79235779-79235798 None:intergenic 40.0%
CTAAACAACTCATGTTGACC+AGG + chr1_1:79235934-79235953 Msa0046810:intron 40.0%
ATCCAGAACAGCCTTTGTTA+AGG + chr1_1:79235976-79235995 Msa0046810:CDS 40.0%
AACCTTAACAAAGGCTGTTC+TGG - chr1_1:79235981-79236000 None:intergenic 40.0%
CCTTGCTTCAACCTTAACAA+AGG - chr1_1:79235990-79236009 None:intergenic 40.0%
CCTTTGTTAAGGTTGAAGCA+AGG + chr1_1:79235987-79236006 Msa0046810:CDS 40.0%
!!! TCTTTTTTTGAACGTTCCCG+AGG + chr1_1:79236025-79236044 Msa0046810:CDS 40.0%
TAGGAAAAACCAACCTTCCT+CGG - chr1_1:79236045-79236064 None:intergenic 40.0%
!! GGTGTTTTTGAATCGTCAGT+AGG - chr1_1:79236130-79236149 None:intergenic 40.0%
!! TGATTACAGCTTGTTGGTGT+CGG - chr1_1:79236151-79236170 None:intergenic 40.0%
CGCTAATGATTACAGCTTGT+TGG - chr1_1:79236157-79236176 None:intergenic 40.0%
!! TTTTCTTCGAGTTTGGCAGA+TGG + chr1_1:79236280-79236299 Msa0046810:intron 40.0%
ATCAAGAAGGCAAAGAAGCT+CGG - chr1_1:79236371-79236390 None:intergenic 40.0%
CAGCTTAGAGCAGAGATAAA+TGG + chr1_1:79236469-79236488 Msa0046810:CDS 40.0%
! TTTCAAGATACCTAGCTCTC+TGG + chr1_1:79236504-79236523 Msa0046810:CDS 40.0%
ATAAGACAAACCAGAGAGCT+AGG - chr1_1:79236517-79236536 None:intergenic 40.0%
ACTTATCGTCCTTGAGACAA+TGG + chr1_1:79236757-79236776 Msa0046810:CDS 40.0%
CTTATCGTCCTTGAGACAAT+GGG + chr1_1:79236758-79236777 Msa0046810:CDS 40.0%
TAATTCAACCCTACACAAGC+TGG + chr1_1:79236788-79236807 Msa0046810:CDS 40.0%
AATTCAACCCTACACAAGCT+GGG + chr1_1:79236789-79236808 Msa0046810:CDS 40.0%
TCCTAGAGTATACAACTTCC+GGG - chr1_1:79237309-79237328 None:intergenic 40.0%
CTCCTAGAGTATACAACTTC+CGG - chr1_1:79237310-79237329 None:intergenic 40.0%
! ACCTTGTCATGTTTTCTGAC+AGG + chr1_1:79237425-79237444 Msa0046810:intron 40.0%
! CCTTGTCATGTTTTCTGACA+GGG + chr1_1:79237426-79237445 Msa0046810:intron 40.0%
ACACTGTTCCTTGTGATTGT+GGG + chr1_1:79237511-79237530 Msa0046810:CDS 40.0%
! CAACTTTTGGATCTTCAGTG+TGG - chr1_1:79237572-79237591 None:intergenic 40.0%
CACTGAAGATCCAAAAGTTG+TGG + chr1_1:79237572-79237591 Msa0046810:CDS 40.0%
GAAGATCCAAAAGTTGTGGT+TGG + chr1_1:79237576-79237595 Msa0046810:CDS 40.0%
! GATTGTGTTGAAGCTCTGAT+AGG + chr1_1:79237648-79237667 Msa0046810:CDS 40.0%
! CTGATAGGAGCATACTATGT+AGG + chr1_1:79237663-79237682 Msa0046810:CDS 40.0%
! ATAGGAGCATACTATGTAGG+TGG + chr1_1:79237666-79237685 Msa0046810:CDS 40.0%
CTTCACATGATGAAATGGCT+CGG + chr1_1:79237705-79237724 Msa0046810:CDS 40.0%
TTCACATGATGAAATGGCTC+GGG + chr1_1:79237706-79237725 Msa0046810:CDS 40.0%
TTCGGAACTTGAACTGTCAA+TGG + chr1_1:79237734-79237753 Msa0046810:CDS 40.0%
! CGTATCCAATTTTTGCCTCA+AGG - chr1_1:79237824-79237843 None:intergenic 40.0%
! ATTTTCTGTCAAGGGACTCT+TGG + chr1_1:79237845-79237864 Msa0046810:CDS 40.0%
TTCTGACTCAGACAAATGTG+TGG - chr1_1:79237880-79237899 None:intergenic 40.0%
CATTTGTCTGAGTCAGAACA+TGG + chr1_1:79237882-79237901 Msa0046810:CDS 40.0%
AGACAGTTTGAGAGAGCTTA+CGG + chr1_1:79238011-79238030 Msa0046810:intron 40.0%
TTAATCTGTAAGGGTCCGTT+TGG + chr1_1:79238210-79238229 Msa0046810:intron 40.0%
!! TCATGCATATTTTCTGGCAG+AGG + chr1_1:79238483-79238502 Msa0046810:intron 40.0%
! ATTCCTTGGTGACTCAGTAT+TGG + chr1_1:79238511-79238530 Msa0046810:CDS 40.0%
GAGTCATACCGAAATTGATC+CGG + chr1_1:79238562-79238581 Msa0046810:CDS 40.0%
AGTCATACCGAAATTGATCC+GGG + chr1_1:79238563-79238582 Msa0046810:CDS 40.0%
TTTAATCCCTTGGAGTGGTA+CGG - chr1_1:79238747-79238766 None:intergenic 40.0%
TTGTTTCAAACACAGGCACT+TGG + chr1_1:79239170-79239189 Msa0046810:intron 40.0%
!! GATCTAGTAGAGAGTATTGC+TGG + chr1_1:79239194-79239213 Msa0046810:CDS 40.0%
!! TCTAGTAGAGAGTATTGCTG+GGG + chr1_1:79239196-79239215 Msa0046810:CDS 40.0%
AAACCTTCCACACTTGATCA+AGG - chr1_1:79239247-79239266 None:intergenic 40.0%
GTAACAATTGGAGATAGCAG+AGG - chr1_1:79239275-79239294 None:intergenic 40.0%
TGCATTAATTCACGCAATGG+AGG - chr1_1:79239317-79239336 None:intergenic 40.0%
ATGCAATTATCCGACTCTCT+CGG + chr1_1:79239332-79239351 Msa0046810:CDS 40.0%
TCATGATAAGAAGGGAACCA+TGG + chr1_1:79239379-79239398 Msa0046810:CDS 40.0%
ACAGTTGCCAAATGAACGAT+TGG + chr1_1:79239421-79239440 Msa0046810:CDS 40.0%
TCTCGAACCAATCGTTCATT+TGG - chr1_1:79239431-79239450 None:intergenic 40.0%
!! AAATGAACGATTGGTTCGAG+AGG + chr1_1:79239430-79239449 Msa0046810:CDS 40.0%
!! AATGAACGATTGGTTCGAGA+GGG + chr1_1:79239431-79239450 Msa0046810:CDS 40.0%
TCAGTTGTTGAAGGATCTTG+AGG + chr1_1:79239496-79239515 Msa0046810:CDS 40.0%
!! TTAATTGCTACTGGCTTTGG+GGG - chr1_1:79239720-79239739 None:intergenic 40.0%
TCAGCTGCAAATGAATCTAC+TGG + chr1_1:79239765-79239784 Msa0046810:CDS 40.0%
TGAATCTACTGGTGATCTGA+AGG + chr1_1:79239776-79239795 Msa0046810:CDS 40.0%
ACTAGTATCAGAGGCTTTAC+TGG - chr1_1:79239808-79239827 None:intergenic 40.0%
AGTAAAGCCTCTGATACTAG+TGG + chr1_1:79239807-79239826 Msa0046810:CDS 40.0%
! GATACTAGTGGTTCTATTCC+AGG + chr1_1:79239819-79239838 Msa0046810:CDS 40.0%
GTTGAATCAAAGGAAGGCAA+TGG - chr1_1:79240108-79240127 None:intergenic 40.0%
ATTTGAATCGTGTAAAGGGC+TGG + chr1_1:79240262-79240281 Msa0046810:CDS 40.0%
!! TATCACTTCTAGCTTCTCCT+TGG - chr1_1:79240361-79240380 None:intergenic 40.0%
AAGCGCTTTATGAGTTACAG+CGG + chr1_1:79240411-79240430 Msa0046810:CDS 40.0%
TGAGCTCTTTATACCACTTG+TGG - chr1_1:79240492-79240511 None:intergenic 40.0%
!!! TGCACTTGTTTTTTCTGCTG+CGG - chr1_1:79240645-79240664 None:intergenic 40.0%
GCAGAAAAAACAAGTGCAAG+AGG + chr1_1:79240647-79240666 Msa0046810:three_prime_UTR 40.0%
AAAAACAAGTGCAAGAGGAG+AGG + chr1_1:79240652-79240671 Msa0046810:three_prime_UTR 40.0%
AAGAGGAGAGGAAAGATGAA+AGG + chr1_1:79240664-79240683 Msa0046810:three_prime_UTR 40.0%
AACAGATAGATAGAGGCTGT+AGG + chr1_1:79240720-79240739 Msa0046810:three_prime_UTR 40.0%
ACAGATAGATAGAGGCTGTA+GGG + chr1_1:79240721-79240740 Msa0046810:three_prime_UTR 40.0%
!! GAAGGGTTTTAGCAGCAATT+TGG + chr1_1:79240744-79240763 Msa0046810:three_prime_UTR 40.0%
ACTTCTAAACAAGTGCCCTT+GGG - chr1_1:79240894-79240913 None:intergenic 40.0%
AGAAACCCTCATTGCCAACT+TGG + chr1_1:79228485-79228504 Msa0046810:CDS 45.0%
! AGGAACCAAGTTGGCAATGA+GGG - chr1_1:79228493-79228512 None:intergenic 45.0%
! TAGGAACCAAGTTGGCAATG+AGG - chr1_1:79228494-79228513 None:intergenic 45.0%
TTGCCAACTTGGTTCCTAGA+AGG + chr1_1:79228496-79228515 Msa0046810:CDS 45.0%
! AGGAGACTGGTCAAGCTATT+AGG + chr1_1:79228847-79228866 Msa0046810:CDS 45.0%
GGTCAAGCTATTAGGTCTAG+TGG + chr1_1:79228855-79228874 Msa0046810:CDS 45.0%
CTGATTCACAAGGTGAACAG+TGG - chr1_1:79228910-79228929 None:intergenic 45.0%
CACTGTTCACCTTGTGAATC+AGG + chr1_1:79228908-79228927 Msa0046810:CDS 45.0%
GAGGAATACTATGGGTCCAA+AGG + chr1_1:79229075-79229094 Msa0046810:CDS 45.0%
!! GGTCCAAAGGAGTTGATACA+TGG + chr1_1:79229088-79229107 Msa0046810:CDS 45.0%
GAATTTGAAGAGCTGGCAGA+AGG + chr1_1:79229110-79229129 Msa0046810:CDS 45.0%
AAGCCATATCGGAGAGTTTG+TGG + chr1_1:79229424-79229443 Msa0046810:intron 45.0%
! AGGTAATGGTGCCAAGGAAA+AGG - chr1_1:79229623-79229642 None:intergenic 45.0%
TGAGTAAAGATGGATGGCCA+AGG - chr1_1:79229646-79229665 None:intergenic 45.0%
TTGAAGGAAATGGAGAGGAG+GGG + chr1_1:79230135-79230154 Msa0046810:intron 45.0%
! CTGTCTAGTTCAACTGAAGC+GGG - chr1_1:79230411-79230430 None:intergenic 45.0%
CTAATGTCTTCTGCTGCTGT+AGG + chr1_1:79230458-79230477 Msa0046810:intron 45.0%
GCTGTCATCCCGAAAATCTT+TGG - chr1_1:79230510-79230529 None:intergenic 45.0%
!! GCATCACCAGTTGGTAAAAG+AGG + chr1_1:79230528-79230547 Msa0046810:CDS 45.0%
GGGCCTAATGGGATAAATAG+TGG - chr1_1:79231053-79231072 None:intergenic 45.0%
ATCAGAACGTAGGGCCTAAT+GGG - chr1_1:79231064-79231083 None:intergenic 45.0%
CAATCTAGACTGAGTGACAG+TGG - chr1_1:79231144-79231163 None:intergenic 45.0%
TGTTAAAGATCGGACGGAGA+TGG + chr1_1:79231389-79231408 Msa0046810:CDS 45.0%
TGGACTGTTGTGTGCTTATG+AGG + chr1_1:79231748-79231767 Msa0046810:CDS 45.0%
TTGCGACAAGACTTCCAAGT+GGG - chr1_1:79232045-79232064 None:intergenic 45.0%
TATATGCGCACCAAGATGGA+GGG - chr1_1:79232676-79232695 None:intergenic 45.0%
ATGATGCAGAATACTCCCAC+TGG - chr1_1:79233466-79233485 None:intergenic 45.0%
CTCACAGTTGCCTATGTAAC+TGG + chr1_1:79233622-79233641 Msa0046810:CDS 45.0%
GTCTAGATCTTCCACGAGAT+TGG - chr1_1:79233919-79233938 None:intergenic 45.0%
!! GCATCAAACAGGCTCTAAAC+TGG - chr1_1:79234016-79234035 None:intergenic 45.0%
! GTTTAGAGCCTGTTTGATGC+AGG + chr1_1:79234016-79234035 Msa0046810:intron 45.0%
!! TTCACTAAGAGTATTCGGGG+GGG - chr1_1:79234054-79234073 None:intergenic 45.0%
! GTCTAAAGTGACTGATGCTC+CGG - chr1_1:79234289-79234308 None:intergenic 45.0%
! TTTTGAATCGCTGCCTATGG+AGG + chr1_1:79234486-79234505 Msa0046810:CDS 45.0%
TTTGAATCGCTGCCTATGGA+GGG + chr1_1:79234487-79234506 Msa0046810:CDS 45.0%
ACTTGGAAAGCTGCATTAGG+TGG - chr1_1:79234541-79234560 None:intergenic 45.0%
GCAGCTTTCCAAGTACTAGT+TGG + chr1_1:79234547-79234566 Msa0046810:CDS 45.0%
CTGAAGGACCAACTAGTACT+TGG - chr1_1:79234558-79234577 None:intergenic 45.0%
CAAGTACTAGTTGGTCCTTC+AGG + chr1_1:79234556-79234575 Msa0046810:CDS 45.0%
CAGGCATTATGTGGTTCATG+GGG + chr1_1:79234931-79234950 Msa0046810:CDS 45.0%
! GCATGAAATTTGGCTCCATC+AGG - chr1_1:79234964-79234983 None:intergenic 45.0%
GTTCGGCATCCAAATCTACT+TGG - chr1_1:79235140-79235159 None:intergenic 45.0%
AGTAGATTTGGATGCCGAAC+AGG + chr1_1:79235140-79235159 Msa0046810:CDS 45.0%
GTAAGTCCACAACAGTCCAA+GGG + chr1_1:79235327-79235346 Msa0046810:CDS 45.0%
TAAGTCCACAACAGTCCAAG+GGG + chr1_1:79235328-79235347 Msa0046810:CDS 45.0%
! TGTTAGGCGGAGATTTTCGT+TGG + chr1_1:79235505-79235524 Msa0046810:CDS 45.0%
!! GCGGAGATTTTCGTTGGTTA+TGG + chr1_1:79235511-79235530 Msa0046810:CDS 45.0%
CTGTTATCGGTATCACATGG+TGG - chr1_1:79235569-79235588 None:intergenic 45.0%
GATGAACTGGTATCACAAGG+TGG - chr1_1:79235605-79235624 None:intergenic 45.0%
!! GTAGCTTTGGCCATTCATAC+CGG + chr1_1:79235704-79235723 Msa0046810:CDS 45.0%
! TCCGCTGAAAGTCCTTTTGA+CGG + chr1_1:79235764-79235783 Msa0046810:CDS 45.0%
GAACAATGACAAGTCTGGAC+CGG + chr1_1:79235787-79235806 Msa0046810:CDS 45.0%
GTAAACGTCATCCTGTCTTC+CGG - chr1_1:79235809-79235828 None:intergenic 45.0%
GAGAGAAAACAACGGAAGGT+GGG - chr1_1:79235868-79235887 None:intergenic 45.0%
AGAGAGAAAACAACGGAAGG+TGG - chr1_1:79235869-79235888 None:intergenic 45.0%
GAGAGAGAGAAAACAACGGA+AGG - chr1_1:79235872-79235891 None:intergenic 45.0%
CAACTCATGTTGACCAGGTA+TGG + chr1_1:79235939-79235958 Msa0046810:intron 45.0%
TCGTAGTGTGATTCCATACC+TGG - chr1_1:79235955-79235974 None:intergenic 45.0%
! TTTTTGAACGTTCCCGAGGA+AGG + chr1_1:79236029-79236048 Msa0046810:CDS 45.0%
AGGAAAAACCAACCTTCCTC+GGG - chr1_1:79236044-79236063 None:intergenic 45.0%
AATGACAAGTTCAAGGGAGG+GGG - chr1_1:79236094-79236113 None:intergenic 45.0%
CAATGACAAGTTCAAGGGAG+GGG - chr1_1:79236095-79236114 None:intergenic 45.0%
CCAATGACAAGTTCAAGGGA+GGG - chr1_1:79236096-79236115 None:intergenic 45.0%
TCCAATGACAAGTTCAAGGG+AGG - chr1_1:79236097-79236116 None:intergenic 45.0%
!! CTACATTGTCGGCTTTAGGT+GGG - chr1_1:79236181-79236200 None:intergenic 45.0%
!! TCTACATTGTCGGCTTTAGG+TGG - chr1_1:79236182-79236201 None:intergenic 45.0%
GGTGGAATGTGAACATGTAC+AGG - chr1_1:79236349-79236368 None:intergenic 45.0%
TCAAGAAGGCAAAGAAGCTC+GGG - chr1_1:79236370-79236389 None:intergenic 45.0%
! TATCTCTGCTCTAAGCTGAC+TGG - chr1_1:79236467-79236486 None:intergenic 45.0%
! ATGGAACGTCTTGAGTTGCT+AGG + chr1_1:79236666-79236685 Msa0046810:CDS 45.0%
ATCTGTTCCCAGCTTGTGTA+GGG - chr1_1:79236799-79236818 None:intergenic 45.0%
AATTCATTAGGTGCAGGCAC+TGG + chr1_1:79237153-79237172 Msa0046810:intron 45.0%
CCTAGAGTATACAACTTCCG+GGG - chr1_1:79237308-79237327 None:intergenic 45.0%
CCCTGTCAGAAAACATGACA+AGG - chr1_1:79237429-79237448 None:intergenic 45.0%
! GTGTGTATACAGTCTTGTCC+AGG - chr1_1:79237495-79237514 None:intergenic 45.0%
CACACTGTTCCTTGTGATTG+TGG + chr1_1:79237510-79237529 Msa0046810:CDS 45.0%
TGTTCCTTGTGATTGTGGGT+TGG + chr1_1:79237515-79237534 Msa0046810:CDS 45.0%
GTTTCCAACCCACAATCACA+AGG - chr1_1:79237522-79237541 None:intergenic 45.0%
TGGTTGGAAAGTTGTGTGAC+AGG + chr1_1:79237592-79237611 Msa0046810:CDS 45.0%
GGTTGGAAAGTTGTGTGACA+GGG + chr1_1:79237593-79237612 Msa0046810:CDS 45.0%
GTTGGAAAGTTGTGTGACAG+GGG + chr1_1:79237594-79237613 Msa0046810:CDS 45.0%
! GAAATGGCTCGGGATTGATT+CGG + chr1_1:79237716-79237735 Msa0046810:CDS 45.0%
AAATGAGATTGCCAGCCTTG+AGG + chr1_1:79237806-79237825 Msa0046810:CDS 45.0%
! TCCAATTTTTGCCTCAAGGC+TGG - chr1_1:79237820-79237839 None:intergenic 45.0%
TCTGAGTCAGAACATGGAAC+TGG + chr1_1:79237888-79237907 Msa0046810:CDS 45.0%
! TATTTAGGGCCCGTTTGGAT+TGG - chr1_1:79238416-79238435 None:intergenic 45.0%
TATTGGACCTGCTCATCACA+TGG + chr1_1:79238528-79238547 Msa0046810:CDS 45.0%
ATAGATGCCATGTGATGAGC+AGG - chr1_1:79238538-79238557 None:intergenic 45.0%
CAACTCTCCCGGATCAATTT+CGG - chr1_1:79238573-79238592 None:intergenic 45.0%
TATTCACAGAAGCAGAACGC+AGG - chr1_1:79238601-79238620 None:intergenic 45.0%
ATAATCCCGAGCTATGCAGA+AGG - chr1_1:79238670-79238689 None:intergenic 45.0%
! CCTTAGGAGCTTTAATCCCT+TGG - chr1_1:79238757-79238776 None:intergenic 45.0%
CCAAGGGATTAAAGCTCCTA+AGG + chr1_1:79238754-79238773 Msa0046810:CDS 45.0%
!! GGAGGCAGTTCAAGTTTTTC+AGG - chr1_1:79239299-79239318 None:intergenic 45.0%
ACGAATCTCAACATGCTCCA+TGG - chr1_1:79239399-79239418 None:intergenic 45.0%
!!! CGCTGCTTTTCAGTTGTTGA+AGG + chr1_1:79239487-79239506 Msa0046810:CDS 45.0%
TGAATAAAAAGGGAGGACCC+CGG + chr1_1:79240046-79240065 Msa0046810:CDS 45.0%
ACACTTCATACAGTTCGCTC+CGG - chr1_1:79240068-79240087 None:intergenic 45.0%
AAGTGTGCAAGAGAAAGCTG+TGG + chr1_1:79240082-79240101 Msa0046810:CDS 45.0%
ACTTTGGGCATACCAGGTTA+TGG + chr1_1:79240323-79240342 Msa0046810:CDS 45.0%
! GCTGTAACTCATAAAGCGCT+TGG - chr1_1:79240412-79240431 None:intergenic 45.0%
CTTTATGAGTTACAGCGGCT+TGG + chr1_1:79240416-79240435 Msa0046810:CDS 45.0%
!!! ACTTGTTTTTTCTGCTGCGG+AGG - chr1_1:79240642-79240661 None:intergenic 45.0%
CAGATAGATAGAGGCTGTAG+GGG + chr1_1:79240722-79240741 Msa0046810:three_prime_UTR 45.0%
AAATGCTAACAAGTGCCCCA+AGG + chr1_1:79240875-79240894 Msa0046810:three_prime_UTR 45.0%
AATGCTAACAAGTGCCCCAA+GGG + chr1_1:79240876-79240895 Msa0046810:three_prime_UTR 45.0%
CTTCTAAACAAGTGCCCTTG+GGG - chr1_1:79240893-79240912 None:intergenic 45.0%
GACTTCTAAACAAGTGCCCT+TGG - chr1_1:79240895-79240914 None:intergenic 45.0%
!! AGATTATTTAAAAAAAAAAA+TGG + chr1_1:79233742-79233761 Msa0046810:intron 5.0%
!!! TTTAAAATATAAATTTGTTT+TGG + chr1_1:79238897-79238916 Msa0046810:intron 5.0%
TCACTACAGGGATCAGTTGG+AGG + chr1_1:79228740-79228759 Msa0046810:intron 50.0%
!! TGATTGCTCTCTAGGGCTCA+TGG + chr1_1:79229227-79229246 Msa0046810:intron 50.0%
ATGGATGGCCAAGGAGGTAA+TGG - chr1_1:79229637-79229656 None:intergenic 50.0%
GTAAAGATGGATGGCCAAGG+AGG - chr1_1:79229643-79229662 None:intergenic 50.0%
!! TGTTATTCTCTGGGGGTGTC+AGG + chr1_1:79229689-79229708 Msa0046810:intron 50.0%
!! GTTATTCTCTGGGGGTGTCA+GGG + chr1_1:79229690-79229709 Msa0046810:intron 50.0%
! GATGAGTGTCATTGGGCATC+AGG + chr1_1:79230009-79230028 Msa0046810:CDS 50.0%
! GTTTGGTTCGACAATGGGAG+AGG - chr1_1:79230338-79230357 None:intergenic 50.0%
GTTCAACTGAAGCGGGAGAA+GGG - chr1_1:79230404-79230423 None:intergenic 50.0%
AGTTCAACTGAAGCGGGAGA+AGG - chr1_1:79230405-79230424 None:intergenic 50.0%
CATCAGAACGTAGGGCCTAA+TGG - chr1_1:79231065-79231084 None:intergenic 50.0%
GTAGATTCTATGACCCGGCA+CGG + chr1_1:79231442-79231461 Msa0046810:CDS 50.0%
TCAAAGCATGAAACCGTGCC+GGG - chr1_1:79231458-79231477 None:intergenic 50.0%
CTCAAAGCATGAAACCGTGC+CGG - chr1_1:79231459-79231478 None:intergenic 50.0%
CTTGCGACAAGACTTCCAAG+TGG - chr1_1:79232046-79232065 None:intergenic 50.0%
CTATATGCGCACCAAGATGG+AGG - chr1_1:79232677-79232696 None:intergenic 50.0%
CTGATGCACTAGCTCGTAAG+AGG + chr1_1:79233659-79233678 Msa0046810:CDS 50.0%
GGATTCTTTCCGATCCGGAA+AGG + chr1_1:79233696-79233715 Msa0046810:CDS 50.0%
CGTATCACACACGAGCAGTT+TGG - chr1_1:79233863-79233882 None:intergenic 50.0%
AACTACAAACTGTCGTGGGG+AGG - chr1_1:79233892-79233911 None:intergenic 50.0%
GTGTGAGCTTATGTGGTTCG+AGG - chr1_1:79234080-79234099 None:intergenic 50.0%
ACCACATAATGCCTGAACGC+TGG - chr1_1:79234926-79234945 None:intergenic 50.0%
TCATGGGGAGACAAACCTGA+TGG + chr1_1:79234946-79234965 Msa0046810:CDS 50.0%
CGTAAGTCCACAACAGTCCA+AGG + chr1_1:79235326-79235345 Msa0046810:CDS 50.0%
CACAACAGTCCAAGGGGAAA+GGG + chr1_1:79235334-79235353 Msa0046810:CDS 50.0%
CCCGTCAAAAGGACTTTCAG+CGG - chr1_1:79235768-79235787 None:intergenic 50.0%
! CCGCTGAAAGTCCTTTTGAC+GGG + chr1_1:79235765-79235784 Msa0046810:CDS 50.0%
GACGGGAACAATGACAAGTC+TGG + chr1_1:79235782-79235801 Msa0046810:CDS 50.0%
CCCTCCCTTGAACTTGTCAT+TGG + chr1_1:79236093-79236112 Msa0046810:intron 50.0%
! TCTTCGAGTTTGGCAGATGG+TGG + chr1_1:79236283-79236302 Msa0046810:intron 50.0%
! CTTCGAGTTTGGCAGATGGT+GGG + chr1_1:79236284-79236303 Msa0046810:intron 50.0%
! TTCGAGTTTGGCAGATGGTG+GGG + chr1_1:79236285-79236304 Msa0046810:intron 50.0%
GGGGACAAGTCATCACAAGT+TGG + chr1_1:79236304-79236323 Msa0046810:CDS 50.0%
! CAAGTCATCACAAGTTGGCC+CGG + chr1_1:79236309-79236328 Msa0046810:CDS 50.0%
!!! ACAGGAACTTTTGGGGCTAC+CGG - chr1_1:79236331-79236350 None:intergenic 50.0%
ACGAACAGCCCATTGTCTCA+AGG - chr1_1:79236769-79236788 None:intergenic 50.0%
GATCTGTTCCCAGCTTGTGT+AGG - chr1_1:79236800-79236819 None:intergenic 50.0%
GGGAACAGATCGCAACTTAC+AGG + chr1_1:79236809-79236828 Msa0046810:CDS 50.0%
CCCCGGAAGTTGTATACTCT+AGG + chr1_1:79237305-79237324 Msa0046810:intron 50.0%
GGAGCATACTATGTAGGTGG+CGG + chr1_1:79237669-79237688 Msa0046810:CDS 50.0%
GCCAGCCTTGAGGCAAAAAT+TGG + chr1_1:79237816-79237835 Msa0046810:CDS 50.0%
TTCTGTCAAGGGACTCTTGG+TGG + chr1_1:79237848-79237867 Msa0046810:CDS 50.0%
CTGTAAGGGTCCGTTTGGAT+TGG + chr1_1:79238215-79238234 Msa0046810:intron 50.0%
TGGCAGAGGCTTGAATTCCT+TGG + chr1_1:79238497-79238516 Msa0046810:intron 50.0%
GGTCCAATACTGAGTCACCA+AGG - chr1_1:79238517-79238536 None:intergenic 50.0%
!! TATGCAGAAGGTGCTGGTGA+AGG - chr1_1:79238658-79238677 None:intergenic 50.0%
AGTGGTACGGCATTGTCTTC+TGG - chr1_1:79238734-79238753 None:intergenic 50.0%
ACAATGCCGTACCACTCCAA+GGG + chr1_1:79238738-79238757 Msa0046810:CDS 50.0%
! GGAGCTTTAATCCCTTGGAG+TGG - chr1_1:79238752-79238771 None:intergenic 50.0%
CACTTGATCAAGGTCGAGCT+TGG - chr1_1:79239237-79239256 None:intergenic 50.0%
AGCTCGACCTTGATCAAGTG+TGG + chr1_1:79239237-79239256 Msa0046810:CDS 50.0%
CGACCTTGATCAAGTGTGGA+AGG + chr1_1:79239241-79239260 Msa0046810:CDS 50.0%
!! ACGATTGGTTCGAGAGGGAA+AGG + chr1_1:79239436-79239455 Msa0046810:CDS 50.0%
!! CGATTGGTTCGAGAGGGAAA+GGG + chr1_1:79239437-79239456 Msa0046810:CDS 50.0%
ACTTCATACAGTTCGCTCCG+GGG - chr1_1:79240066-79240085 None:intergenic 50.0%
CACTTCATACAGTTCGCTCC+GGG - chr1_1:79240067-79240086 None:intergenic 50.0%
GAATCGTGTAAAGGGCTGGA+AGG + chr1_1:79240266-79240285 Msa0046810:CDS 50.0%
AAAGGGCTGGAAGGAAGCAA+AGG + chr1_1:79240275-79240294 Msa0046810:CDS 50.0%
GATGGCGATGTAGAATGCCA+AGG + chr1_1:79240461-79240480 Msa0046810:CDS 50.0%
TACCACTTGTGGCTTCTCCT+TGG - chr1_1:79240481-79240500 None:intergenic 50.0%
TAGATAGAGGCTGTAGGGGA+AGG + chr1_1:79240726-79240745 Msa0046810:three_prime_UTR 50.0%
AGATAGAGGCTGTAGGGGAA+GGG + chr1_1:79240727-79240746 Msa0046810:three_prime_UTR 50.0%
! CCAAGGAGGTAATGGTGCCA+AGG - chr1_1:79229629-79229648 None:intergenic 55.0%
CCTTGGCACCATTACCTCCT+TGG + chr1_1:79229626-79229645 Msa0046810:intron 55.0%
TCAGGGATCTGTGCACTGTC+AGG + chr1_1:79229707-79229726 Msa0046810:intron 55.0%
GGGATGACAGCATCACCAGT+TGG + chr1_1:79230519-79230538 Msa0046810:CDS 55.0%
GCCAGCGTTCAGGCATTATG+TGG + chr1_1:79234922-79234941 Msa0046810:CDS 55.0%
CCTTTCCCCTTGGACTGTTG+TGG - chr1_1:79235336-79235355 None:intergenic 55.0%
CCACAACAGTCCAAGGGGAA+AGG + chr1_1:79235333-79235352 Msa0046810:CDS 55.0%
ACAAGTCTGGACCGGAAGAC+AGG + chr1_1:79235795-79235814 Msa0046810:CDS 55.0%
TGAACGTTCCCGAGGAAGGT+TGG + chr1_1:79236033-79236052 Msa0046810:intron 55.0%
!!! CAGGAACTTTTGGGGCTACC+GGG - chr1_1:79236330-79236349 None:intergenic 55.0%
AGAAGGCAAAGAAGCTCGGG+TGG - chr1_1:79236367-79236386 None:intergenic 55.0%
CCAACGACGCGGTTCAAATG+CGG - chr1_1:79237466-79237485 None:intergenic 55.0%
GTGGAGAGACGCAGCAGTAA+TGG - chr1_1:79237769-79237788 None:intergenic 55.0%
TGTCAAGGGACTCTTGGTGG+AGG + chr1_1:79237851-79237870 Msa0046810:CDS 55.0%
TGGAACTGGCTGCTGCTATG+AGG + chr1_1:79237902-79237921 Msa0046810:CDS 55.0%
! GGCTGTATTTAGGGCCCGTT+TGG - chr1_1:79238421-79238440 None:intergenic 55.0%
CCAGCACCTTCTGCATAGCT+CGG + chr1_1:79238661-79238680 Msa0046810:CDS 55.0%
CAGCACCTTCTGCATAGCTC+GGG + chr1_1:79238662-79238681 Msa0046810:CDS 55.0%
GACAATGCCGTACCACTCCA+AGG + chr1_1:79238737-79238756 Msa0046810:CDS 55.0%
!! TTGCTACTGGCTTTGGGGGT+TGG - chr1_1:79239716-79239735 None:intergenic 55.0%
CGAAATTGTCGGTGCGAACC+TGG - chr1_1:79239840-79239859 None:intergenic 55.0%
TGCCAAGGAGAAGCCACAAG+TGG + chr1_1:79240476-79240495 Msa0046810:CDS 55.0%
GAATCGCTGCCTATGGAGGG+AGG + chr1_1:79234490-79234509 Msa0046810:CDS 60.0%
ATGTGCCCTCCTCCCTCCAT+AGG - chr1_1:79234502-79234521 None:intergenic 60.0%
CCGCATTTGAACCGCGTCGT+TGG + chr1_1:79237463-79237482 Msa0046810:CDS 60.0%
CCAGGAGCAATCCAACGACG+CGG - chr1_1:79237477-79237496 None:intergenic 60.0%
TGTGTGACAGGGGTCATCGC+TGG + chr1_1:79237604-79237623 Msa0046810:CDS 60.0%
CGCAGGTCAGTCAACTCTCC+CGG - chr1_1:79238584-79238603 None:intergenic 60.0%
! CCGAGCTATGCAGAAGGTGC+TGG - chr1_1:79238664-79238683 None:intergenic 60.0%
TCGCTGCCTATGGAGGGAGG+AGG + chr1_1:79234493-79234512 Msa0046810:CDS 65.0%
CGCTGCCTATGGAGGGAGGA+GGG + chr1_1:79234494-79234513 Msa0046810:CDS 65.0%
TCGAGTGCAGCTGCAGCTGC+AGG + chr1_1:79234718-79234737 Msa0046810:CDS 65.0%
ACACGGCACAGCCAGCGTTC+AGG + chr1_1:79234912-79234931 Msa0046810:CDS 65.0%
CCGCGTCGTTGGATTGCTCC+TGG + chr1_1:79237474-79237493 Msa0046810:CDS 65.0%
GCAGCTGCAGCTGCAGGTGC+AGG + chr1_1:79234724-79234743 Msa0046810:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 79228088 79240937 79228088 ID=Msa0046810;Name=Msa0046810
chr1_1 mRNA 79228088 79240937 79228088 ID=Msa0046810-mRNA-1;Parent=Msa0046810;Name=Msa0046810-mRNA-1;_AED=0.02;_eAED=0.02;_QI=254|1|0.96|1|1|1|25|402|1719
chr1_1 exon 79228088 79228517 79228088 ID=Msa0046810-mRNA-1:exon:27268;Parent=Msa0046810-mRNA-1
chr1_1 exon 79228749 79228929 79228749 ID=Msa0046810-mRNA-1:exon:27269;Parent=Msa0046810-mRNA-1
chr1_1 exon 79229036 79229149 79229036 ID=Msa0046810-mRNA-1:exon:27270;Parent=Msa0046810-mRNA-1
chr1_1 exon 79229925 79230059 79229925 ID=Msa0046810-mRNA-1:exon:27271;Parent=Msa0046810-mRNA-1
chr1_1 exon 79230480 79230549 79230480 ID=Msa0046810-mRNA-1:exon:27272;Parent=Msa0046810-mRNA-1
chr1_1 exon 79231217 79231281 79231217 ID=Msa0046810-mRNA-1:exon:27273;Parent=Msa0046810-mRNA-1
chr1_1 exon 79231381 79231512 79231381 ID=Msa0046810-mRNA-1:exon:27274;Parent=Msa0046810-mRNA-1
chr1_1 exon 79231629 79231769 79231629 ID=Msa0046810-mRNA-1:exon:27275;Parent=Msa0046810-mRNA-1
chr1_1 exon 79232555 79232684 79232555 ID=Msa0046810-mRNA-1:exon:27276;Parent=Msa0046810-mRNA-1
chr1_1 exon 79233094 79233199 79233094 ID=Msa0046810-mRNA-1:exon:27277;Parent=Msa0046810-mRNA-1
chr1_1 exon 79233525 79233717 79233525 ID=Msa0046810-mRNA-1:exon:27278;Parent=Msa0046810-mRNA-1
chr1_1 exon 79233812 79233972 79233812 ID=Msa0046810-mRNA-1:exon:27279;Parent=Msa0046810-mRNA-1
chr1_1 exon 79234143 79234358 79234143 ID=Msa0046810-mRNA-1:exon:27280;Parent=Msa0046810-mRNA-1
chr1_1 exon 79234465 79234745 79234465 ID=Msa0046810-mRNA-1:exon:27281;Parent=Msa0046810-mRNA-1
chr1_1 exon 79234890 79235161 79234890 ID=Msa0046810-mRNA-1:exon:27282;Parent=Msa0046810-mRNA-1
chr1_1 exon 79235266 79235846 79235266 ID=Msa0046810-mRNA-1:exon:27283;Parent=Msa0046810-mRNA-1
chr1_1 exon 79235956 79236050 79235956 ID=Msa0046810-mRNA-1:exon:27284;Parent=Msa0046810-mRNA-1
chr1_1 exon 79236299 79236525 79236299 ID=Msa0046810-mRNA-1:exon:27285;Parent=Msa0046810-mRNA-1
chr1_1 exon 79236621 79236830 79236621 ID=Msa0046810-mRNA-1:exon:27286;Parent=Msa0046810-mRNA-1
chr1_1 exon 79237447 79237923 79237447 ID=Msa0046810-mRNA-1:exon:27287;Parent=Msa0046810-mRNA-1
chr1_1 exon 79238503 79238775 79238503 ID=Msa0046810-mRNA-1:exon:27288;Parent=Msa0046810-mRNA-1
chr1_1 exon 79239185 79239517 79239185 ID=Msa0046810-mRNA-1:exon:27289;Parent=Msa0046810-mRNA-1
chr1_1 exon 79239645 79239840 79239645 ID=Msa0046810-mRNA-1:exon:27290;Parent=Msa0046810-mRNA-1
chr1_1 exon 79240028 79240142 79240028 ID=Msa0046810-mRNA-1:exon:27291;Parent=Msa0046810-mRNA-1
chr1_1 exon 79240256 79240937 79240256 ID=Msa0046810-mRNA-1:exon:27292;Parent=Msa0046810-mRNA-1
chr1_1 five_prime_UTR 79228088 79228341 79228088 ID=Msa0046810-mRNA-1:five_prime_utr;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79228342 79228517 79228342 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79228749 79228929 79228749 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79229036 79229149 79229036 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79229925 79230059 79229925 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79230480 79230549 79230480 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79231217 79231281 79231217 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79231381 79231512 79231381 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79231629 79231769 79231629 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79232555 79232684 79232555 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79233094 79233199 79233094 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79233525 79233717 79233525 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79233812 79233972 79233812 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79234143 79234358 79234143 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79234465 79234745 79234465 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79234890 79235161 79234890 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79235266 79235846 79235266 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79235956 79236050 79235956 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79236299 79236525 79236299 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79236621 79236830 79236621 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79237447 79237923 79237447 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79238503 79238775 79238503 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79239185 79239517 79239185 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79239645 79239840 79239645 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79240028 79240142 79240028 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 CDS 79240256 79240535 79240256 ID=Msa0046810-mRNA-1:cds;Parent=Msa0046810-mRNA-1
chr1_1 three_prime_UTR 79240536 79240937 79240536 ID=Msa0046810-mRNA-1:three_prime_utr;Parent=Msa0046810-mRNA-1
Gene Sequence

>Msa0046810

ATGGATTTATCAAACGATAACATGGATTCAATCATGGATTCATCAAACGACAATGATGATCAAAATCAAACTAAAAATCTCAAGAGAAAATTCGATCACTTGTATGCAAAACCCAATGTTGAACAAGATTCTCCATCTCAAGAAGAAACCCTCATTGCCAACTTGGTTCCTAGAAGGGATCAGTTGGAGGCATTTGAAGTTGCAAAAAAGAGGAATACAATTGCAATTATGGATACAGGTTCAGGAAAAACATTGATTGCTATACTGCTTATCAAGGAGACTGGTCAAGCTATTAGGTCTAGTGGTGTCAAAAAATTGATTGTTTTCTTAGCTCCCACTGTTCACCTTGTGAATCAGCAATACAAGAATATAAAACTGAACACAGATTTACAAGTTGAGGAATACTATGGGTCCAAAGGAGTTGATACATGGAATTTGAAGAGCTGGCAGAAGGAAATTAGTGACAATGATGTAATGGTTATGACACCTCAGATTCTTTTGGATGCCTTCAGAAAAGCATTCCTGAGTATAGAAATGATATGCTTGATGGTTATTGATGAGTGTCATTGGGCATCAGGCAACCATCCCTATGCAAAAATAATGGCGGAGTTTTATCACCAAGCTAATGAAAAGCCAAAGATTTTCGGGATGACAGCATCACCAGTTGGTAAAAGAGGTGTTTCTTCTACTTTGGTTTGTGAGGGTCAGATATCAGATCTTGAAAACATCTTGGATTCTCAGAGTTACGTTGTTAAAGATCGGACGGAGATGGATGTATATATCCCATCTGCAAAAGAGAGTTGTAGATTCTATGACCCGGCACGGTTTCATGCTTTGAGTTTGAAGCCAAAAATTGAAGCTTTGTGGTCGAAGTGTGACGCGTTGTTGTCAGAATTTCAAAGTGATTATAAGGATATGGACCAAAAATTTAGGGCATTGCATCAGCGGATGTCCAATGAGCTTGCAAAAATTTTATATTGCCTTGAAGATCTTGGACTGTTGTGTGCTTATGAGGCAGCTAAATTCTGTCAAAAGAAATTCTCCAAAATTAATGGAGAGTGTGAAGTTTACCGAAAAGCCAATTTTCAGTGTGTAACTATCATTGAAGAAGTAATCAAAATAATTGAAGAATCCCTCCATCTTGCCGATGAAATGATTTTGGATGTTGAATTTGATTGTTCAAAGGCAGTAGACATGGGATACATTTCACCAAAATTACTTGAACTTATTAAACTCTTCGAAACATTTGGAGAACCTAGTCAGTTATTGTGCCTCATCTTTGTTGAAAGAATCATTACAGCAAAGGTGATTGAAAGATTTGTGAAAAAAGTTTCCCAGATATCTCATCTCACAGTTGCCTATGTAACTGGAAGCAATACATCAGCTGATGCACTAGCTCGTAAGAGGCAGAAAGAGATATTGGATTCTTTCCGATCCGGAAAGGTCAATCTTCTATTTACAACTGATGTACTTGAGGAAGGAATTCATGTGCCAAACTGCTCGTGTGTGATACGTTTTGACCTCCCCACGACAGTTTGTAGTTATATCCAATCTCGTGGAAGATCTAGACGTGCTAACTCCCAATTTATTTTGATGTTGGAGAGGGGAAACTTGAAGCAAAGAAATCAGCTGTTTGACATAATCAGGAGCGAGCGTTCCATGAATGATGCAGCTGTTAGTAAAGACCATGAATCTAATTTAAGGGCGTTTACTGTAAGGAAAACAGAATCATACTGTGTGGATTCTACCGGAGCATCAGTCACTTTAGACTCCAGTGTCAGTCTTATAAATCAATATTGCGAAAAGCTCCCACGAGACAAGTACTCCTCTGCAAAGCCCAATTTTGAATCGCTGCCTATGGAGGGAGGAGGGCACATGTGTAAATTAATATTACCACCTAATGCAGCTTTCCAAGTACTAGTTGGTCCTTCAGGAAAAGATGTTCGACAGGCAAAGACTCTTGTATGTTTAGAAGCTTGTAAGAAGCTGCATCAAATGGGTGCCTTAAATGACCATCTTGTTCCTTTCATTGAAGATCCTTTAGAAGCAGACAATATTATAAAAAACAAGGAATCGAGTGCAGCTGCAGCTGCAGGTGCAGGGACCACGAAAAGAAAGGAGTTACACGGCACAGCCAGCGTTCAGGCATTATGTGGTTCATGGGGAGACAAACCTGATGGAGCCAAATTTCATGCTTATAAATTTGAATTCAAATGTAATATTGTTTCTGAAATTTATTCTGGATTCGTTCTTCTGGTCGAGTCAAAGCTTGATGATGATGTGGGAAATATAGAATTAGATCTGTATTTAATCTCAAAGATGGTGAAGACTTCTGTCATTTCATGTGGCCAAGTAGATTTGGATGCCGAACAGGTGACGAAAGCAAAAAGCTTCCATGAGCTTTTTTTCAACGGTTTATTCGGGAGATTGATTCGTAAGTCCACAACAGTCCAAGGGGAAAGGGAATTTTTACTGCAGAAAGACACAGAACTATTGTGGAGTCCAAAAAACTCGTATTTGCTTCTACCACTTGAGAAGTCAAATGATATATGTATCAGATCTTTGCAGATACATTGGTCTGCAATCAATTCTTGTGCTTCTGCTATTGCATTTGTTAGGCGGAGATTTTCGTTGGTTATGGAAGTTTCTGATGATAACAGCAAAATCATATCACCACCATGTGATACCGATAACAGCAAAATCATATCACCACCTTGTGATACCAGTTCATCATCGGATATGGAATGTGAAAGCACAAACATGTTTCACTTTGCCAATTGTGTTGTTGATGTTAATAGTGTGAAAGATAATGTAGCTTTGGCCATTCATACCGGAAAAGTATATTGTATCATTGATGTAGTTGATAACTCATCCGCTGAAAGTCCTTTTGACGGGAACAATGACAAGTCTGGACCGGAAGACAGGATGACGTTTACACAATATTTCCAGAAAAGGTATGGAATCACACTACGACATCCAGAACAGCCTTTGTTAAGGTTGAAGCAAGGTCATAATGCGCACAATCTTTTTTTGAACGTTCCCGAGGAAGATGGTGGGGACAAGTCATCACAAGTTGGCCCGGTAGCCCCAAAAGTTCCTGTACATGTTCACATTCCACCCGAGCTTCTTTGCCTTCTTGATGTTAAAAGAGATGTGTACAAGTCAATGTACTTGCTACCATCTCTTATGTACCGTATTGAATCTTTGATGTTATCCAGTCAGCTTAGAGCAGAGATAAATGGTCACACAGACAATTTCAAGATACCTAGCTCTCTGATTCTAGAAGCACTTACAACTTTAAGATGCTGTGAAAAGTTTTCTATGGAACGTCTTGAGTTGCTAGGAGATTCTGTTTTGAAATATGCGGTGAGCTGTCATCTCTATCTTAAATATCCTAAGAAACATGAAGGACACTTATCGTCCTTGAGACAATGGGCTGTTCGTAATTCAACCCTACACAAGCTGGGAACAGATCGCAACTTACAGGGATATATTCGAGACTCCGCATTTGAACCGCGTCGTTGGATTGCTCCTGGACAAGACTGTATACACACTGTTCCTTGTGATTGTGGGTTGGAAACCTTAGAAGTGCCTTTAGATGTAAAGTTCCACACTGAAGATCCAAAAGTTGTGGTTGGAAAGTTGTGTGACAGGGGTCATCGCTGGATGTGCTCGAAGACTATTGCTGATTGTGTTGAAGCTCTGATAGGAGCATACTATGTAGGTGGCGGATTGATTGCTTCACTTCACATGATGAAATGGCTCGGGATTGATTCGGAACTTGAACTGTCAATGGTTGATCAAGCCATTACTGCTGCGTCTCTCCACACATATATGCCAAAAGTAAATGAGATTGCCAGCCTTGAGGCAAAAATTGGATACGAATTTTCTGTCAAGGGACTCTTGGTGGAGGCAACCACACATTTGTCTGAGTCAGAACATGGAACTGGCTGCTGCTATGAGAGGCTTGAATTCCTTGGTGACTCAGTATTGGACCTGCTCATCACATGGCATCTATTTCAGAGTCATACCGAAATTGATCCGGGAGAGTTGACTGACCTGCGTTCTGCTTCTGTGAATAATGAAAATTTTGCTCAAGCTGCTGTTAGACGAAACCTTCACCAGCACCTTCTGCATAGCTCGGGATTATTACAAAGCCAGATATTAGAATATGCGAAAGTTATATCTGAACCAGAAGACAATGCCGTACCACTCCAAGGGATTAAAGCTCCTAAGGCACTTGGAGATCTAGTAGAGAGTATTGCTGGGGCTATACTAATTGATACCAAGCTCGACCTTGATCAAGTGTGGAAGGTTTTCAATCCTCTGCTATCTCCAATTGTTACTCCTGAAAAACTTGAACTGCCTCCATTGCGTGAATTAATGCAATTATCCGACTCTCTCGGATATTTTGTAAAAGTAAAAATAAGTCATGATAAGAAGGGAACCATGGAGCATGTTGAGATTCGTGTACAGTTGCCAAATGAACGATTGGTTCGAGAGGGAAAGGGACCAAATAAAAAATCTGCGAAAGGAGACGCTGCTTTTCAGTTGTTGAAGGATCTTGAGAAAAGGGGAATTTCATATAAGGGAAAAAAAGTAATGGATTACAGTATTCCCAGTTGTCAAATTGAAGACCAACCCCCAAAGCCAGTAGCAATTAAAAAGCCCAAATTGGACAAAACTAACTCAGCTGCAAATGAATCTACTGGTGATCTGAAGGACATTTCCAGTAAAGCCTCTGATACTAGTGGTTCTATTCCAGTTGTTTCATCAATCAAAATGAATAAAAAGGGAGGACCCCGGAGCGAACTGTATGAAGTGTGCAAGAGAAAGCTGTGGCCATTGCCTTCCTTTGATTCAACAGAATATAAAGATAGATCTCTATTTGAATCGTGTAAAGGGCTGGAAGGAAGCAAAGGACTGAACTGTTTTGTGTCGAAAATAACTTTGGGCATACCAGGTTATGGTGATATAAAATGCCAAGGAGAAGCTAGAAGTGATAAGAAGAGCTCATATGACTCTGCTGCAGTCCAAGCGCTTTATGAGTTACAGCGGCTTGGAAAAATTATGATTAAGATTGATGATGGCGATGTAGAATGCCAAGGAGAAGCCACAAGTGGTATAAAGAGCTCACTTGACTCTACTGCAGTCCAATAA
Protein sequence

>Msa0046810

MDLSNDNMDSIMDSSNDNDDQNQTKNLKRKFDHLYAKPNVEQDSPSQEETLIANLVPRRDQLEAFEVAKKRNTIAIMDTGSGKTLIAILLIKETGQAIRSSGVKKLIVFLAPTVHLVNQQYKNIKLNTDLQVEEYYGSKGVDTWNLKSWQKEISDNDVMVMTPQILLDAFRKAFLSIEMICLMVIDECHWASGNHPYAKIMAEFYHQANEKPKIFGMTASPVGKRGVSSTLVCEGQISDLENILDSQSYVVKDRTEMDVYIPSAKESCRFYDPARFHALSLKPKIEALWSKCDALLSEFQSDYKDMDQKFRALHQRMSNELAKILYCLEDLGLLCAYEAAKFCQKKFSKINGECEVYRKANFQCVTIIEEVIKIIEESLHLADEMILDVEFDCSKAVDMGYISPKLLELIKLFETFGEPSQLLCLIFVERIITAKVIERFVKKVSQISHLTVAYVTGSNTSADALARKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYIQSRGRSRRANSQFILMLERGNLKQRNQLFDIIRSERSMNDAAVSKDHESNLRAFTVRKTESYCVDSTGASVTLDSSVSLINQYCEKLPRDKYSSAKPNFESLPMEGGGHMCKLILPPNAAFQVLVGPSGKDVRQAKTLVCLEACKKLHQMGALNDHLVPFIEDPLEADNIIKNKESSAAAAAGAGTTKRKELHGTASVQALCGSWGDKPDGAKFHAYKFEFKCNIVSEIYSGFVLLVESKLDDDVGNIELDLYLISKMVKTSVISCGQVDLDAEQVTKAKSFHELFFNGLFGRLIRKSTTVQGEREFLLQKDTELLWSPKNSYLLLPLEKSNDICIRSLQIHWSAINSCASAIAFVRRRFSLVMEVSDDNSKIISPPCDTDNSKIISPPCDTSSSSDMECESTNMFHFANCVVDVNSVKDNVALAIHTGKVYCIIDVVDNSSAESPFDGNNDKSGPEDRMTFTQYFQKRYGITLRHPEQPLLRLKQGHNAHNLFLNVPEEDGGDKSSQVGPVAPKVPVHVHIPPELLCLLDVKRDVYKSMYLLPSLMYRIESLMLSSQLRAEINGHTDNFKIPSSLILEALTTLRCCEKFSMERLELLGDSVLKYAVSCHLYLKYPKKHEGHLSSLRQWAVRNSTLHKLGTDRNLQGYIRDSAFEPRRWIAPGQDCIHTVPCDCGLETLEVPLDVKFHTEDPKVVVGKLCDRGHRWMCSKTIADCVEALIGAYYVGGGLIASLHMMKWLGIDSELELSMVDQAITAASLHTYMPKVNEIASLEAKIGYEFSVKGLLVEATTHLSESEHGTGCCYERLEFLGDSVLDLLITWHLFQSHTEIDPGELTDLRSASVNNENFAQAAVRRNLHQHLLHSSGLLQSQILEYAKVISEPEDNAVPLQGIKAPKALGDLVESIAGAILIDTKLDLDQVWKVFNPLLSPIVTPEKLELPPLRELMQLSDSLGYFVKVKISHDKKGTMEHVEIRVQLPNERLVREGKGPNKKSAKGDAAFQLLKDLEKRGISYKGKKVMDYSIPSCQIEDQPPKPVAIKKPKLDKTNSAANESTGDLKDISSKASDTSGSIPVVSSIKMNKKGGPRSELYEVCKRKLWPLPSFDSTEYKDRSLFESCKGLEGSKGLNCFVSKITLGIPGYGDIKCQGEARSDKKSSYDSAAVQALYELQRLGKIMIKIDDGDVECQGEATSGIKSSLDSTAVQ*