Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373650 | XP_003593218.2 | 95.729 | 796 | 32 | 1 | 7 | 800 | 11 | 806 | 0.0 | 1441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373650 | sp|Q9LME6|MBD8_ARATH | 45.752 | 153 | 61 | 3 | 133 | 263 | 238 | 390 | 4.98e-33 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373650 | G7IPJ6 | 95.729 | 796 | 32 | 1 | 7 | 800 | 11 | 806 | 0.0 | 1441 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1373650 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa1373650 | 0.809168 | 2.161848e-50 | -8.615850e-47 |
| Msa0008110 | Msa1373650 | 0.855650 | 5.472190e-62 | -8.615850e-47 |
| Msa0017510 | Msa1373650 | 0.830603 | 2.676532e-55 | -8.615850e-47 |
| Msa0045710 | Msa1373650 | 0.805285 | 1.436855e-49 | -8.615850e-47 |
| Msa0046810 | Msa1373650 | 0.820118 | 8.120689e-53 | -8.615850e-47 |
| Msa0057420 | Msa1373650 | 0.857520 | 1.543547e-62 | -8.615850e-47 |
| Msa0074350 | Msa1373650 | 0.813277 | 2.777199e-51 | -8.615850e-47 |
| Msa0081050 | Msa1373650 | 0.804646 | 1.954375e-49 | -8.615850e-47 |
| Msa0090400 | Msa1373650 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0110970 | Msa1373650 | 0.803851 | 2.861618e-49 | -8.615850e-47 |
| Msa1365060 | Msa1373650 | 0.819315 | 1.239107e-52 | -8.615850e-47 |
| Msa1367370 | Msa1373650 | 0.833795 | 4.342718e-56 | -8.615850e-47 |
| Msa1369550 | Msa1373650 | 0.871119 | 8.714264e-67 | -8.615850e-47 |
| Msa1373650 | Msa1399550 | 0.817080 | 3.968977e-52 | -8.615850e-47 |
| Msa1373650 | Msa1417420 | 0.803161 | 3.978687e-49 | -8.615850e-47 |
| Msa1373650 | Msa1422420 | 0.822111 | 2.821816e-53 | -8.615850e-47 |
| Msa1373650 | Msa1440960 | 0.803211 | 3.884316e-49 | -8.615850e-47 |
| Msa1373650 | Msa1443110 | 0.836899 | 7.141383e-57 | -8.615850e-47 |
| Msa1373650 | Msa1459690 | 0.809490 | 1.844605e-50 | -8.615850e-47 |
| Msa1373650 | Msa1464640 | 0.803872 | 2.832713e-49 | -8.615850e-47 |
| Msa0622730 | Msa1373650 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0623220 | Msa1373650 | 0.811588 | 6.495525e-51 | -8.615850e-47 |
| Msa0658240 | Msa1373650 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
| Msa0660330 | Msa1373650 | 0.837423 | 5.244050e-57 | -8.615850e-47 |
| Msa0669320 | Msa1373650 | 0.802306 | 5.972715e-49 | -8.615850e-47 |
| Msa0689520 | Msa1373650 | 0.866207 | 3.376112e-65 | -8.615850e-47 |
| Msa0711970 | Msa1373650 | 0.805701 | 1.175573e-49 | -8.615850e-47 |
| Msa0713000 | Msa1373650 | 0.814877 | 1.231357e-51 | -8.615850e-47 |
| Msa0749740 | Msa1373650 | 0.818700 | 1.709573e-52 | -8.615850e-47 |
| Msa0749770 | Msa1373650 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0750090 | Msa1373650 | 0.816383 | 5.690397e-52 | -8.615850e-47 |
| Msa0754520 | Msa1373650 | 0.806922 | 6.501741e-50 | -8.615850e-47 |
| Msa0769390 | Msa1373650 | 0.800386 | 1.476857e-48 | -8.615850e-47 |
| Msa0829800 | Msa1373650 | 0.802284 | 6.036445e-49 | -8.615850e-47 |
| Msa0833220 | Msa1373650 | 0.803009 | 4.277653e-49 | -8.615850e-47 |
| Msa0137880 | Msa1373650 | 0.809875 | 1.524295e-50 | -8.615850e-47 |
| Msa0148940 | Msa1373650 | 0.809744 | 1.626652e-50 | -8.615850e-47 |
| Msa0149370 | Msa1373650 | 0.842723 | 2.172372e-58 | -8.615850e-47 |
| Msa0157290 | Msa1373650 | 0.831175 | 1.937060e-55 | -8.615850e-47 |
| Msa0167010 | Msa1373650 | 0.810731 | 9.965235e-51 | -8.615850e-47 |
| Msa0200260 | Msa1373650 | 0.806008 | 1.013078e-49 | -8.615850e-47 |
| Msa0225320 | Msa1373650 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
| Msa0225460 | Msa1373650 | 0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0225680 | Msa1373650 | 0.832316 | 1.013457e-55 | -8.615850e-47 |
| Msa0230990 | Msa1373650 | 0.803499 | 3.385502e-49 | -8.615850e-47 |
| Msa0232690 | Msa1373650 | 0.810755 | 9.845734e-51 | -8.615850e-47 |
| Msa0234600 | Msa1373650 | 0.801200 | 1.007418e-48 | -8.615850e-47 |
| Msa1268670 | Msa1373650 | 0.812002 | 5.277492e-51 | -8.615850e-47 |
| Msa1269480 | Msa1373650 | 0.814813 | 1.272399e-51 | -8.615850e-47 |
| Msa1279380 | Msa1373650 | 0.809511 | 1.825170e-50 | -8.615850e-47 |
| Msa1283860 | Msa1373650 | 0.806462 | 8.129663e-50 | -8.615850e-47 |
| Msa1302830 | Msa1373650 | 0.809182 | 2.146937e-50 | -8.615850e-47 |
| Msa1306690 | Msa1373650 | 0.848303 | 6.677451e-60 | -8.615850e-47 |
| Msa0376350 | Msa1373650 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
| Msa0379770 | Msa1373650 | 0.829093 | 6.242193e-55 | -8.615850e-47 |
| Msa0382190 | Msa1373650 | 0.821114 | 4.794843e-53 | -8.615850e-47 |
| Msa0397150 | Msa1373650 | 0.810194 | 1.301473e-50 | -8.615850e-47 |
| Msa0410650 | Msa1373650 | 0.807962 | 3.912149e-50 | -8.615850e-47 |
| Msa0417270 | Msa1373650 | 0.803500 | 3.385103e-49 | -8.615850e-47 |
| Msa0417880 | Msa1373650 | 0.818506 | 1.891838e-52 | -8.615850e-47 |
| Msa0419700 | Msa1373650 | 0.809180 | 2.149607e-50 | -8.615850e-47 |
| Msa0424790 | Msa1373650 | 0.806068 | 9.844920e-50 | -8.615850e-47 |
| Msa0428150 | Msa1373650 | 0.839361 | 1.658888e-57 | -8.615850e-47 |
| Msa0428590 | Msa1373650 | 0.806901 | 6.567862e-50 | -8.615850e-47 |
| Msa0431700 | Msa1373650 | 0.804374 | 2.227027e-49 | -8.615850e-47 |
| Msa0442830 | Msa1373650 | 0.858233 | 9.481669e-63 | -8.615850e-47 |
| Msa0462500 | Msa1373650 | 0.845012 | 5.293167e-59 | -8.615850e-47 |
| Msa0981950 | Msa1373650 | 0.991952 | 1.840397e-190 | -8.615850e-47 |
| Msa1018690 | Msa1373650 | 0.815878 | 7.377733e-52 | -8.615850e-47 |
| Msa1020560 | Msa1373650 | 0.807671 | 4.510847e-50 | -8.615850e-47 |
| Msa1020670 | Msa1373650 | 0.809541 | 1.797923e-50 | -8.615850e-47 |
| Msa1085200 | Msa1373650 | 0.805768 | 1.138232e-49 | -8.615850e-47 |
| Msa1096960 | Msa1373650 | 0.809807 | 1.576524e-50 | -8.615850e-47 |
| Msa1097980 | Msa1373650 | 0.808349 | 3.236204e-50 | -8.615850e-47 |
| Msa0261340 | Msa1373650 | 0.816968 | 4.205517e-52 | -8.615850e-47 |
| Msa0264040 | Msa1373650 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
| Msa0267110 | Msa1373650 | 0.812196 | 4.787796e-51 | -8.615850e-47 |
| Msa0288890 | Msa1373650 | 0.865425 | 5.963270e-65 | -8.615850e-47 |
| Msa0302000 | Msa1373650 | 0.830147 | 3.458298e-55 | -8.615850e-47 |
| Msa0311280 | Msa1373650 | 0.805288 | 1.434919e-49 | -8.615850e-47 |
| Msa0314340 | Msa1373650 | 0.872927 | 2.182486e-67 | -8.615850e-47 |
| Msa0335870 | Msa1373650 | 0.804220 | 2.398340e-49 | -8.615850e-47 |
| Msa0338510 | Msa1373650 | 0.802151 | 6.427844e-49 | -8.615850e-47 |
| Msa0339320 | Msa1373650 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0345000 | Msa1373650 | 0.820699 | 5.975973e-53 | -8.615850e-47 |
| Msa1140210 | Msa1373650 | 0.802116 | 6.533805e-49 | -8.615850e-47 |
| Msa1151910 | Msa1373650 | 0.809177 | 2.152280e-50 | -8.615850e-47 |
| Msa1154690 | Msa1373650 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa1172080 | Msa1373650 | 0.802928 | 4.445466e-49 | -8.615850e-47 |
| Msa1223470 | Msa1373650 | 0.850591 | 1.538423e-60 | -8.615850e-47 |
| Msa0507680 | Msa1373650 | 0.817177 | 3.774669e-52 | -8.615850e-47 |
| Msa0511750 | Msa1373650 | 0.811044 | 8.525062e-51 | -8.615850e-47 |
| Msa0520890 | Msa1373650 | 0.836522 | 8.906600e-57 | -8.615850e-47 |
| Msa0524190 | Msa1373650 | 0.834121 | 3.598477e-56 | -8.615850e-47 |
| Msa0538470 | Msa1373650 | 0.802575 | 5.256441e-49 | -8.615850e-47 |
| Msa0572500 | Msa1373650 | 0.806795 | 6.917036e-50 | -8.615850e-47 |
| Msa0572520 | Msa1373650 | 0.810508 | 1.113131e-50 | -8.615850e-47 |
| Msa0576880 | Msa1373650 | 0.811631 | 6.357764e-51 | -8.615850e-47 |
| Msa0880140 | Msa1373650 | 0.826916 | 2.086080e-54 | -8.615850e-47 |
| Msa0880680 | Msa1373650 | 0.807619 | 4.626255e-50 | -8.615850e-47 |
| Msa0906610 | Msa1373650 | 0.801850 | 7.413083e-49 | -8.615850e-47 |
| Msa0938480 | Msa1373650 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa0945110 | Msa1373650 | 0.813939 | 1.985366e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373650 | MtrunA17_Chr2g0279291 | 95.729 | 796 | 32 | 1 | 7 | 800 | 11 | 806 | 0.0 | 1441 |
| Msa1373650 | MtrunA17_Chr3g0115871 | 35.216 | 301 | 146 | 10 | 14 | 271 | 23 | 317 | 1.61e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373650 | AT1G22310.1 | 45.752 | 153 | 61 | 3 | 133 | 263 | 139 | 291 | 1.08e-34 | 138 |
| Msa1373650 | AT1G22310.2 | 45.752 | 153 | 61 | 3 | 133 | 263 | 238 | 390 | 5.06e-34 | 137 |
Find 223 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAGGGGTTTGATCATTC+TGG | 0.186677 | tig0019461:-72062 | Msa1373650:CDS |
| AATAAGAGTGACTTGAAAAT+TGG | 0.224444 | tig0019461:-71903 | Msa1373650:CDS |
| ACAAGAAGTTATGTTAAATA+TGG | 0.243118 | tig0019461:-70870 | Msa1373650:CDS |
| TCCATTCGGTGAACAGAAAA+TGG | 0.251866 | tig0019461:-72303 | Msa1373650:CDS |
| ATTGTTGATGCTTCTGATTT+TGG | 0.254403 | tig0019461:-74072 | Msa1373650:CDS |
| AAGGAGGAAGAGGAGTTGTT+AGG | 0.257264 | tig0019461:-74147 | Msa1373650:CDS |
| GATTGATTTGGCGGCGTTAT+CGG | 0.268030 | tig0019461:-74220 | Msa1373650:CDS |
| GAGAAGGACGGAGGGGTTAA+AGG | 0.270308 | tig0019461:-74166 | Msa1373650:CDS |
| AGGAGGAAGAGGAGTTGTTA+GGG | 0.296961 | tig0019461:-74146 | Msa1373650:CDS |
| AAAGAATCCAAAGATTGTTC+TGG | 0.310627 | tig0019461:+71771 | None:intergenic |
| AGAAGAGAAAATCCAGCTTT+TGG | 0.314324 | tig0019461:-70205 | Msa1373650:three_prime_UTR |
| ATTCAAGGAAATTGCCTTGC+TGG | 0.314369 | tig0019461:-72813 | Msa1373650:CDS |
| TTTATTGCCGCAGATATATA+AGG | 0.318369 | tig0019461:-73984 | Msa1373650:intron |
| AGTCCCTTGCTTCATTCATC+TGG | 0.322751 | tig0019461:-72014 | Msa1373650:CDS |
| GGTATCCCCAGAACAATCTT+TGG | 0.329312 | tig0019461:-71778 | Msa1373650:CDS |
| CCTTTACCTTCAGAAGTATC+AGG | 0.329892 | tig0019461:+72101 | None:intergenic |
| AGAAAATGTGGTCCAATCTA+AGG | 0.338186 | tig0019461:-71814 | Msa1373650:CDS |
| TTGAGGGGTTTGATCATTCT+GGG | 0.341962 | tig0019461:-72061 | Msa1373650:CDS |
| TCCTCATTGACAGGGGTTCC+AGG | 0.343875 | tig0019461:-71026 | Msa1373650:intron |
| TTGATATTCTCCAGTCCTAA+TGG | 0.345479 | tig0019461:-73070 | Msa1373650:intron |
| ACCAGACACATTTGAGTTAG+TGG | 0.353621 | tig0019461:+72856 | None:intergenic |
| GCTTCGGAATCCTTCAATTC+CGG | 0.357751 | tig0019461:-74361 | Msa1373650:CDS |
| GGAAATTGCCTTGCTGGAAA+TGG | 0.362080 | tig0019461:-72807 | Msa1373650:CDS |
| TTCTGTTGCCCGCGAGGAGC+AGG | 0.367007 | tig0019461:-72897 | Msa1373650:CDS |
| TTCTGGTTGCACTAATACTA+AGG | 0.367939 | tig0019461:-71955 | Msa1373650:CDS |
| GAGGAGAGCTGAAGATTTGC+CGG | 0.368944 | tig0019461:-72528 | Msa1373650:CDS |
| TCAGTAGTCACTCTCTGTTC+CGG | 0.374463 | tig0019461:+72944 | None:intergenic |
| TTTGGTGATGTGTTGCCTTT+GGG | 0.376749 | tig0019461:-74054 | Msa1373650:CDS |
| CGATTTCGCTTGTAGATTTG+AGG | 0.379924 | tig0019461:+74574 | None:intergenic |
| TCCTTCACCTCCGGAATTGA+AGG | 0.383220 | tig0019461:+74351 | None:intergenic |
| GAGTGATTTGGTTGGGCAGT+GGG | 0.390198 | tig0019461:-74118 | Msa1373650:CDS |
| GCCGGGTCAGCCTAATGTCC+TGG | 0.392917 | tig0019461:-72510 | Msa1373650:CDS |
| TGAGTGATTTGGTTGGGCAG+TGG | 0.396024 | tig0019461:-74119 | Msa1373650:CDS |
| GGGGAAGTAGGAGGAGGAAG+AGG | 0.404028 | tig0019461:-74098 | Msa1373650:CDS |
| TATCTTCTAACCTCAATTCC+TGG | 0.404525 | tig0019461:+71008 | None:intergenic |
| GTTGATAGAGTGCTCAATTA+TGG | 0.408438 | tig0019461:-70181 | Msa1373650:three_prime_UTR |
| ACCGAAAGTGAAAACGCATT+TGG | 0.408495 | tig0019461:-74274 | Msa1373650:CDS |
| CGTCTCTAATGAACGATTCA+AGG | 0.411445 | tig0019461:-72828 | Msa1373650:CDS |
| TCTTGATGTGTCAACTGAAT+TGG | 0.411782 | tig0019461:-70945 | Msa1373650:CDS |
| TGTTGTAATTGTCTTAGTCT+TGG | 0.412694 | tig0019461:-70018 | Msa1373650:three_prime_UTR |
| CTCGCTATCTCCGCCGCAAA+CGG | 0.418387 | tig0019461:+74186 | None:intergenic |
| TCCAAGAAGAGTGAAAATTC+TGG | 0.419209 | tig0019461:-71972 | Msa1373650:CDS |
| GACAGAAACTGCTGTCCATT+AGG | 0.421132 | tig0019461:+73055 | None:intergenic |
| TTGGGCAGTGGGGAAGTAGG+AGG | 0.422115 | tig0019461:-74107 | Msa1373650:CDS |
| AGCTTCTTCTTAGTTTGAAA+AGG | 0.426234 | tig0019461:-74026 | Msa1373650:CDS |
| GTCTAAAGATGGCCAGCATT+TGG | 0.427912 | tig0019461:+70689 | None:intergenic |
| GATGGAGTTATAATTAAAGA+TGG | 0.429529 | tig0019461:-72638 | Msa1373650:CDS |
| CTTCTCTGATGAACTGTTTG+AGG | 0.429943 | tig0019461:+74406 | None:intergenic |
| TGCTCAAAACTCTATTATAG+AGG | 0.430329 | tig0019461:-72417 | Msa1373650:CDS |
| CGGGCAACAGAAGCAGCAGC+AGG | 0.430626 | tig0019461:+72908 | None:intergenic |
| GCGACATCGGCGGTGAGGTC+GGG | 0.431390 | tig0019461:+74491 | None:intergenic |
| GTCATGTTGGGATTCATGTT+AGG | 0.439001 | tig0019461:-72559 | Msa1373650:CDS |
| CCAACCGCAATTTCTGAAAC+AGG | 0.442236 | tig0019461:+72356 | None:intergenic |
| AAACGGTGTTGTGATTGATT+TGG | 0.447212 | tig0019461:-74232 | Msa1373650:CDS |
| TCCATCTTCGTGATCCTTGA+AGG | 0.449923 | tig0019461:+72455 | None:intergenic |
| CCGAGTTGTTGATGCAAAGA+TGG | 0.451107 | tig0019461:-72180 | Msa1373650:CDS |
| CGCGACATCGGCGGTGAGGT+CGG | 0.451720 | tig0019461:+74490 | None:intergenic |
| TGGTTGGGCAGTGGGGAAGT+AGG | 0.452036 | tig0019461:-74110 | Msa1373650:CDS |
| GCCACTAACTCAAATGTGTC+TGG | 0.452185 | tig0019461:-72857 | Msa1373650:CDS |
| AAGAATCCAAAGATTGTTCT+GGG | 0.453262 | tig0019461:+71772 | None:intergenic |
| TCCTCTATTGTTCCATCCAT+CGG | 0.454254 | tig0019461:+72218 | None:intergenic |
| GAATTTCCATTGGCATTGCC+TGG | 0.455401 | tig0019461:-74330 | Msa1373650:CDS |
| AAGGAGTGAAAATGTACTTC+CGG | 0.455412 | tig0019461:-72963 | Msa1373650:CDS |
| TCTTCTGCTCCCAGGACATT+AGG | 0.455500 | tig0019461:+72500 | None:intergenic |
| CATTACACACTAGTTGTGTA+TGG | 0.456408 | tig0019461:+69977 | None:intergenic |
| CTCTTCCTCACTTCACCACC+AGG | 0.456452 | tig0019461:+74312 | None:intergenic |
| CTTGGTTCATCCGTTTCAGA+TGG | 0.457726 | tig0019461:-72656 | Msa1373650:CDS |
| GGAGGGGTTAAAGGAGGAAG+AGG | 0.459659 | tig0019461:-74157 | Msa1373650:CDS |
| TCAACCTTCAACCACAGCGC+TGG | 0.460783 | tig0019461:-74531 | Msa1373650:CDS |
| GGACCCAGCGCTGTGGTTGA+AGG | 0.460801 | tig0019461:+74527 | None:intergenic |
| AAAACACTTTATGACAGAAC+TGG | 0.462546 | tig0019461:+72603 | None:intergenic |
| GCGGTGGTCGGAGGGGAGAG+TGG | 0.463550 | tig0019461:+74443 | None:intergenic |
| GACAGGGGTTCCAGGAATTG+AGG | 0.466880 | tig0019461:-71018 | Msa1373650:intron |
| CTTAGTTTGAAAAGGAAAGA+TGG | 0.472588 | tig0019461:-74018 | Msa1373650:CDS |
| CGGTGTTGTGATTGATTTGG+CGG | 0.473620 | tig0019461:-74229 | Msa1373650:CDS |
| AATTATAACTCCATCTGAAA+CGG | 0.473735 | tig0019461:+72646 | None:intergenic |
| GAAATACAATCAGATTCCGT+TGG | 0.478566 | tig0019461:-70776 | Msa1373650:CDS |
| CTCTGGTCAAATCAATGTGT+TGG | 0.479845 | tig0019461:-70723 | Msa1373650:CDS |
| TTTGGCGGCGTTATCGGAGG+TGG | 0.480395 | tig0019461:-74214 | Msa1373650:CDS |
| CTTACGAATAAACAGGATTG+TGG | 0.480599 | tig0019461:+70087 | None:intergenic |
| GAAGTGAGGAAGAGGAAGAG+AGG | 0.480995 | tig0019461:-74303 | Msa1373650:CDS |
| CCCAGGACATTAGGCTGACC+CGG | 0.482805 | tig0019461:+72509 | None:intergenic |
| TGTAATTGTCTTAGTCTTGG+AGG | 0.484027 | tig0019461:-70015 | Msa1373650:three_prime_UTR |
| GAAGGTGTCTCATCCGTGAC+TGG | 0.485030 | tig0019461:+72473 | None:intergenic |
| AAGTGAGGAAGAGGAAGAGA+GGG | 0.486983 | tig0019461:-74302 | Msa1373650:CDS |
| AGGGGTTAGAAACCTTAGAT+TGG | 0.489305 | tig0019461:+71802 | None:intergenic |
| CGTCGCTACAATAGTCATGT+TGG | 0.489692 | tig0019461:-72572 | Msa1373650:CDS |
| GAAGTAGGAGGAGGAAGAGG+AGG | 0.489968 | tig0019461:-74095 | Msa1373650:CDS |
| AAAGGAAAGATGGTCGTGCT+TGG | 0.491157 | tig0019461:-74008 | Msa1373650:CDS |
| ACAATACTACATGATCATAT+CGG | 0.491248 | tig0019461:+70060 | None:intergenic |
| TAGTCTTGGAGGCCGTTCAA+TGG | 0.491740 | tig0019461:-70004 | Msa1373650:three_prime_UTR |
| TCCTTCAATTCCGGAGGTGA+AGG | 0.492334 | tig0019461:-74352 | Msa1373650:CDS |
| TTACGAATAAACAGGATTGT+GGG | 0.495318 | tig0019461:+70088 | None:intergenic |
| GCGCTGTGGTTGAAGGTTGA+AGG | 0.496508 | tig0019461:+74534 | None:intergenic |
| GTCGCTACAATAGTCATGTT+GGG | 0.498127 | tig0019461:-72571 | Msa1373650:CDS |
| TCGGAGGGGAGAGTGGGAGT+AGG | 0.501172 | tig0019461:+74450 | None:intergenic |
| TCTTCTGATGAATAGACAAC+AGG | 0.501464 | tig0019461:+72696 | None:intergenic |
| GGCAGTGGGGAAGTAGGAGG+AGG | 0.502422 | tig0019461:-74104 | Msa1373650:CDS |
| AGGTCGGGAGTAGGTGCGGT+GGG | 0.502825 | tig0019461:+74506 | None:intergenic |
| AGTTCGACACTGTTGAGCTT+CGG | 0.505502 | tig0019461:-74377 | Msa1373650:CDS |
| TGAGGAAGAGGAAGAGAGGG+AGG | 0.505615 | tig0019461:-74299 | Msa1373650:CDS |
| AGCTCACAACCACATGTGTA+TGG | 0.505650 | tig0019461:-70835 | Msa1373650:CDS |
| ATCGATGATGATGCGGTGGT+CGG | 0.506767 | tig0019461:+74431 | None:intergenic |
| CAACCTTCAACCACAGCGCT+GGG | 0.506937 | tig0019461:-74530 | Msa1373650:CDS |
| TTTCAGAATTAACAGCATCA+TGG | 0.507095 | tig0019461:+70795 | None:intergenic |
| AGTTATGCATTATACCTTGT+CGG | 0.511195 | tig0019461:+71734 | None:intergenic |
| GGAGGTGGAGCATCCGTTTG+CGG | 0.516406 | tig0019461:-74199 | Msa1373650:CDS |
| GATGTGGCGCTGACTGTTGA+GGG | 0.517199 | tig0019461:-72077 | Msa1373650:CDS |
| AACATAGAAGAAGATGAAGA+AGG | 0.517254 | tig0019461:-74703 | Msa1373650:exon |
| AGGAGAGCTGAAGATTTGCC+GGG | 0.517482 | tig0019461:-72527 | Msa1373650:CDS |
| TGCTGCTTCTGTTGCCCGCG+AGG | 0.518233 | tig0019461:-72903 | Msa1373650:CDS |
| AACGATTACCAGTCTAAAGA+TGG | 0.519030 | tig0019461:+70678 | None:intergenic |
| CGGTGGTCGGAGGGGAGAGT+GGG | 0.519469 | tig0019461:+74444 | None:intergenic |
| AGCTCAACAGTGTCGAACTT+CGG | 0.519517 | tig0019461:+74381 | None:intergenic |
| AAAATGGAAAAGAGCTTGAC+TGG | 0.520687 | tig0019461:-72287 | Msa1373650:CDS |
| AGAAGAATCAACGGTTCAGA+TGG | 0.521404 | tig0019461:-74679 | Msa1373650:CDS |
| GTCCCTTGCTTCATTCATCT+GGG | 0.522300 | tig0019461:-72013 | Msa1373650:CDS |
| GGAGGTGAAGGAATTTCCAT+TGG | 0.522903 | tig0019461:-74340 | Msa1373650:CDS |
| TTCATGTTAGGAATTATTTG+AGG | 0.525350 | tig0019461:-72547 | Msa1373650:CDS |
| AATGGAAATTCCTTCACCTC+CGG | 0.525587 | tig0019461:+74342 | None:intergenic |
| AGAGTGGGAGTAGGAAGAAG+TGG | 0.526076 | tig0019461:+74459 | None:intergenic |
| ACCTTCAAGGATCACGAAGA+TGG | 0.528471 | tig0019461:-72456 | Msa1373650:CDS |
| TATTATAGAGGATTCTATCA+TGG | 0.528948 | tig0019461:-72405 | Msa1373650:CDS |
| ACAACGAGGCGGTATCGACT+TGG | 0.529675 | tig0019461:-72674 | Msa1373650:CDS |
| CTTGAATCGTTCATTAGAGA+CGG | 0.533348 | tig0019461:+72829 | None:intergenic |
| CCGGGTCAGCCTAATGTCCT+GGG | 0.533615 | tig0019461:-72509 | Msa1373650:CDS |
| ATCTAAGGTTTCTAACCCCT+CGG | 0.534183 | tig0019461:-71799 | Msa1373650:CDS |
| GACAGTGGATCACCAAATGC+TGG | 0.535223 | tig0019461:-70701 | Msa1373650:CDS |
| CCTGTTTCAGAAATTGCGGT+TGG | 0.535860 | tig0019461:-72356 | Msa1373650:CDS |
| TCTGGTTGCACTAATACTAA+GGG | 0.537167 | tig0019461:-71954 | Msa1373650:CDS |
| TGATGTGGCGCTGACTGTTG+AGG | 0.537401 | tig0019461:-72078 | Msa1373650:CDS |
| ACCGATGGATGGAACAATAG+AGG | 0.540164 | tig0019461:-72219 | Msa1373650:CDS |
| TCGTTGGTCCTGCTCCTCGC+GGG | 0.541414 | tig0019461:+72889 | None:intergenic |
| ATAAATGCTGAGTCTCCATT+CGG | 0.543577 | tig0019461:-72317 | Msa1373650:CDS |
| GCATATTAATAGTGATCTAT+CGG | 0.544643 | tig0019461:-69887 | Msa1373650:three_prime_UTR |
| GAGATAGCGAGAAGGACGGA+GGG | 0.546960 | tig0019461:-74174 | Msa1373650:CDS |
| TCACGGATGAGACACCTTCA+AGG | 0.549275 | tig0019461:-72469 | Msa1373650:CDS |
| GTGATGTGTTGCCTTTGGGA+TGG | 0.549426 | tig0019461:-74050 | Msa1373650:CDS |
| ATTCATGTGTCCAGTTTGCA+AGG | 0.549705 | tig0019461:-70753 | Msa1373650:CDS |
| CAGCTTGACCTTTGATGAGA+AGG | 0.551090 | tig0019461:-72735 | Msa1373650:CDS |
| GGCAACAGAAGCAGCAGCAG+GGG | 0.553512 | tig0019461:+72910 | None:intergenic |
| CTGGAGACTCTTCTGCTCCC+AGG | 0.553635 | tig0019461:+72492 | None:intergenic |
| GTCGTTGGTCCTGCTCCTCG+CGG | 0.554081 | tig0019461:+72888 | None:intergenic |
| AGTGATTTGGTTGGGCAGTG+GGG | 0.558863 | tig0019461:-74117 | Msa1373650:CDS |
| CCTGATACTTCTGAAGGTAA+AGG | 0.558865 | tig0019461:-72101 | Msa1373650:CDS |
| GAGGTCGGGAGTAGGTGCGG+TGG | 0.560298 | tig0019461:+74505 | None:intergenic |
| ATATGCATCCTTCTCATCAA+AGG | 0.563994 | tig0019461:+72727 | None:intergenic |
| AATCAACGGTTCAGATGGAA+TGG | 0.565745 | tig0019461:-74674 | Msa1373650:CDS |
| GAAAGTGAAAACGCATTTGG+AGG | 0.566521 | tig0019461:-74271 | Msa1373650:CDS |
| TCGGCGGTGAGGTCGGGAGT+AGG | 0.567506 | tig0019461:+74497 | None:intergenic |
| ACACTTCGATATATCTATGC+AGG | 0.569196 | tig0019461:+70156 | None:intergenic |
| GATACCTGTTTCAGAAATTG+CGG | 0.569571 | tig0019461:-72360 | Msa1373650:CDS |
| ATGATGATGCGGTGGTCGGA+GGG | 0.570896 | tig0019461:+74435 | None:intergenic |
| GCCAACTTCTAAAGAAAATG+TGG | 0.571874 | tig0019461:-71826 | Msa1373650:CDS |
| ACTCTATCAACTCCAAAAGC+TGG | 0.574976 | tig0019461:+70193 | None:intergenic |
| CCATCTTTGCATCAACAACT+CGG | 0.577011 | tig0019461:+72180 | None:intergenic |
| AATGCTGGCCATCTTTAGAC+TGG | 0.579372 | tig0019461:-70686 | Msa1373650:intron |
| TCTGGGAATCACATGAAACC+TGG | 0.581198 | tig0019461:-71996 | Msa1373650:CDS |
| TTCTGCATTCAGCTCCGACA+AGG | 0.583172 | tig0019461:-71748 | Msa1373650:intron |
| GATTGTTCTGGGGATACCGA+GGG | 0.583211 | tig0019461:+71783 | None:intergenic |
| TCACCACCAGGCAATGCCAA+TGG | 0.583467 | tig0019461:+74324 | None:intergenic |
| GATGATGATGCGGTGGTCGG+AGG | 0.583551 | tig0019461:+74434 | None:intergenic |
| CACAGTTACAAATCACTCAA+AGG | 0.590461 | tig0019461:-72982 | Msa1373650:CDS |
| GAAGAAGGAAGAAGAATCAA+CGG | 0.590986 | tig0019461:-74688 | Msa1373650:CDS |
| GCGGCGCGACGCGACATCGG+CGG | 0.592768 | tig0019461:+74481 | None:intergenic |
| GTGTATGGAGTTCCATTGAA+CGG | 0.593102 | tig0019461:+69992 | None:intergenic |
| GGGCAACAGAAGCAGCAGCA+GGG | 0.593793 | tig0019461:+72909 | None:intergenic |
| CATGTATTTGCACATCTGCA+AGG | 0.593829 | tig0019461:+72780 | None:intergenic |
| GGTGAGGTCGGGAGTAGGTG+CGG | 0.595345 | tig0019461:+74502 | None:intergenic |
| AGGTAGTCCTCGTTTACCGA+TGG | 0.597128 | tig0019461:-72234 | Msa1373650:CDS |
| GCAAATGACATAGTGGTGCA+AGG | 0.597159 | tig0019461:-70923 | Msa1373650:CDS |
| GGAGATAGCGAGAAGGACGG+AGG | 0.599301 | tig0019461:-74175 | Msa1373650:CDS |
| GCTTGTAGATTTGAGGTCGA+AGG | 0.600873 | tig0019461:+74581 | None:intergenic |
| AGCAGAAGAGTCTCCAGTCA+CGG | 0.602098 | tig0019461:-72486 | Msa1373650:CDS |
| AGTCCTCGTTTACCGATGGA+TGG | 0.602501 | tig0019461:-72230 | Msa1373650:CDS |
| TGATGATGCGGTGGTCGGAG+GGG | 0.603731 | tig0019461:+74436 | None:intergenic |
| TCCAAAACCTTATATATCTG+CGG | 0.604840 | tig0019461:+73977 | None:intergenic |
| TTCTGAAGGTAAAGGTGATG+TGG | 0.604907 | tig0019461:-72093 | Msa1373650:CDS |
| TGATTTGGCGGCGTTATCGG+AGG | 0.605133 | tig0019461:-74217 | Msa1373650:CDS |
| CTGGTGGTGAAGTGAGGAAG+AGG | 0.605528 | tig0019461:-74311 | Msa1373650:CDS |
| AAGGTTCTCCATTTCCAGCA+AGG | 0.609362 | tig0019461:+72799 | None:intergenic |
| AGGTATCGTATTTAGTGTAG+AGG | 0.610633 | tig0019461:+72376 | None:intergenic |
| CAAATGACATAGTGGTGCAA+GGG | 0.613652 | tig0019461:-70922 | Msa1373650:CDS |
| AACTGGACACATGAATCCAA+CGG | 0.616659 | tig0019461:+70760 | None:intergenic |
| ATTCCCAGATGAATGAAGCA+AGG | 0.616754 | tig0019461:+72010 | None:intergenic |
| ATCGTATTTAGTGTAGAGGA+TGG | 0.619864 | tig0019461:+72380 | None:intergenic |
| TCGGAATCCTTCAATTCCGG+AGG | 0.621454 | tig0019461:-74358 | Msa1373650:CDS |
| AGATTGTTCTGGGGATACCG+AGG | 0.623417 | tig0019461:+71782 | None:intergenic |
| TTCCCAGATGAATGAAGCAA+GGG | 0.624115 | tig0019461:+72011 | None:intergenic |
| TTTCCATTGGCATTGCCTGG+TGG | 0.626819 | tig0019461:-74327 | Msa1373650:CDS |
| CAAATCAATGTGTTGGACAG+TGG | 0.627499 | tig0019461:-70716 | Msa1373650:CDS |
| AAGGACGGAGGGGTTAAAGG+AGG | 0.627983 | tig0019461:-74163 | Msa1373650:CDS |
| GGCGGAGATAGCGAGAAGGA+CGG | 0.630693 | tig0019461:-74178 | Msa1373650:CDS |
| CTGGTTGCACTAATACTAAG+GGG | 0.632921 | tig0019461:-71953 | Msa1373650:CDS |
| TGAATTGGCAAATGACATAG+TGG | 0.638698 | tig0019461:-70930 | Msa1373650:CDS |
| ATACAACATACAGCGAGTCA+AGG | 0.642596 | tig0019461:+70116 | None:intergenic |
| AGAAGAAGCTTCCATCCCAA+AGG | 0.644423 | tig0019461:+74039 | None:intergenic |
| TGCGGTGGGACCCAGCGCTG+TGG | 0.645149 | tig0019461:+74520 | None:intergenic |
| TAGTGGCAACAATCTGTCGT+TGG | 0.652025 | tig0019461:+72873 | None:intergenic |
| ATGTGGCGCTGACTGTTGAG+GGG | 0.652083 | tig0019461:-72076 | Msa1373650:CDS |
| TTGTGATGCAGACTGAGCTG+AGG | 0.653285 | tig0019461:+70889 | None:intergenic |
| GGTGGAGCATCCGTTTGCGG+CGG | 0.658249 | tig0019461:-74196 | Msa1373650:CDS |
| CATTGCCTGGTGGTGAAGTG+AGG | 0.660449 | tig0019461:-74317 | Msa1373650:CDS |
| ATCAAGTGAAAATATGAACA+AGG | 0.664405 | tig0019461:-69936 | Msa1373650:three_prime_UTR |
| GTTCCATCCATCGGTAAACG+AGG | 0.667007 | tig0019461:+72227 | None:intergenic |
| GATAGCTGCAATGATGTACC+TGG | 0.669520 | tig0019461:-71876 | Msa1373650:CDS |
| AGATAGCGAGAAGGACGGAG+GGG | 0.671249 | tig0019461:-74173 | Msa1373650:CDS |
| GATGCACCTGATACTTCTGA+AGG | 0.671872 | tig0019461:-72107 | Msa1373650:CDS |
| ACAACCACATGTGTATGGTG+TGG | 0.673155 | tig0019461:-70830 | Msa1373650:CDS |
| GTGGGAGTAGGAAGAAGTGG+CGG | 0.674637 | tig0019461:+74462 | None:intergenic |
| ACATGAACATTAGAAACACC+AGG | 0.677148 | tig0019461:+71858 | None:intergenic |
| GCGACGCGACATCGGCGGTG+AGG | 0.678710 | tig0019461:+74486 | None:intergenic |
| ATTGTTCTGGGGATACCGAG+GGG | 0.684093 | tig0019461:+71784 | None:intergenic |
| GTTAGCGATCTAAATCAGCA+AGG | 0.685979 | tig0019461:-72254 | Msa1373650:CDS |
| TGGTTGCACTAATACTAAGG+GGG | 0.689364 | tig0019461:-71952 | Msa1373650:CDS |
| CATTCTGGGAGTGAACTGCA+AGG | 0.690541 | tig0019461:-72047 | Msa1373650:CDS |
| TTGCGGCGGAGATAGCGAGA+AGG | 0.699580 | tig0019461:-74182 | Msa1373650:CDS |
| TGAGGTAATCGATGATGATG+CGG | 0.701630 | tig0019461:+74424 | None:intergenic |
| AGAATCCAAAGATTGTTCTG+GGG | 0.703845 | tig0019461:+71773 | None:intergenic |
| TATTCCACACCATACACATG+TGG | 0.705154 | tig0019461:+70826 | None:intergenic |
| GGTAATCGATGATGATGCGG+TGG | 0.707704 | tig0019461:+74427 | None:intergenic |
| TTCATCAGAAGACAACGAGG+CGG | 0.748047 | tig0019461:-72685 | Msa1373650:CDS |
| CTATTCATCAGAAGACAACG+AGG | 0.776944 | tig0019461:-72688 | Msa1373650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAATTATTACTTTATT+TGG | - | tig0019461:73219-73238 | Msa1373650:intron | 10.0% |
| !! | AATTGATTATTTAATAACAA+TGG | - | tig0019461:74008-74027 | Msa1373650:CDS | 10.0% |
| !!! | ATTTTATATTCTTCAGTTTT+AGG | - | tig0019461:70697-70716 | Msa1373650:CDS | 15.0% |
| !! | TTTATACAAAAACACTTATA+TGG | + | tig0019461:70822-70841 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTGAAACTAAATT+TGG | - | tig0019461:71294-71313 | Msa1373650:intron | 15.0% |
| !!! | TTTTGTTTGAAACTAAATTT+GGG | - | tig0019461:71295-71314 | Msa1373650:intron | 15.0% |
| !!! | TTTTATTTTGTATTGATCTA+TGG | - | tig0019461:73107-73126 | Msa1373650:intron | 15.0% |
| !! | TAAAAGCAAATTATCATTAT+TGG | - | tig0019461:73490-73509 | Msa1373650:intron | 15.0% |
| !! | TTATTTAATAACAATGGTTT+CGG | - | tig0019461:74014-74033 | Msa1373650:CDS | 15.0% |
| !!! | TGTTTGTTTTGTTGTTAATT+TGG | - | tig0019461:70732-70751 | Msa1373650:CDS | 20.0% |
| !! | TAATGTTCTTTGCTTATTAA+TGG | - | tig0019461:71153-71172 | Msa1373650:intron | 20.0% |
| !! | AATGTTCTTTGCTTATTAAT+GGG | - | tig0019461:71154-71173 | Msa1373650:intron | 20.0% |
| !!! | AGCTATTTCTAAAACAAATT+TGG | - | tig0019461:71264-71283 | Msa1373650:intron | 20.0% |
| !!! | GCTATTTCTAAAACAAATTT+GGG | - | tig0019461:71265-71284 | Msa1373650:intron | 20.0% |
| !! | AATTTATCCTAAAGAGTTTA+TGG | - | tig0019461:71407-71426 | Msa1373650:intron | 20.0% |
| !! | ACAAGAAGTTATGTTAAATA+TGG | - | tig0019461:73782-73801 | Msa1373650:intron | 20.0% |
| !!! | TTTTGTTTTCTTGTGTTTTT+TGG | + | tig0019461:74256-74275 | None:intergenic | 20.0% |
| !! | AATAAGTTGAAGATAGCTTA+TGG | - | tig0019461:70932-70951 | Msa1373650:CDS | 25.0% |
| ! | ACAAATGACAGCTATATTTA+TGG | + | tig0019461:71055-71074 | None:intergenic | 25.0% |
| !! | TGTTATTTGAATCACAGAAT+TGG | - | tig0019461:71078-71097 | Msa1373650:intron | 25.0% |
| ! | TATACTGTTTATCCTAACAT+GGG | + | tig0019461:71211-71230 | None:intergenic | 25.0% |
| ! | TTATACTGTTTATCCTAACA+TGG | + | tig0019461:71212-71231 | None:intergenic | 25.0% |
| ! | CTTATTTCCATAAACTCTTT+AGG | + | tig0019461:71417-71436 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | tig0019461:71431-71450 | Msa1373650:intron | 25.0% |
| ! | AGCAAAAACAGATATGTTTA+TGG | + | tig0019461:71520-71539 | None:intergenic | 25.0% |
| ! | AATTATAACTCCATCTGAAA+CGG | + | tig0019461:72009-72028 | None:intergenic | 25.0% |
| ! | GATGGAGTTATAATTAAAGA+TGG | - | tig0019461:72014-72033 | Msa1373650:CDS | 25.0% |
| ! | TTCATGTTAGGAATTATTTG+AGG | - | tig0019461:72105-72124 | Msa1373650:CDS | 25.0% |
| ! | TATTATAGAGGATTCTATCA+TGG | - | tig0019461:72247-72266 | Msa1373650:CDS | 25.0% |
| ! | AATAAGAGTGACTTGAAAAT+TGG | - | tig0019461:72749-72768 | Msa1373650:CDS | 25.0% |
| ! | TCATATATGTTGCAAAATAG+AGG | - | tig0019461:72966-72985 | Msa1373650:CDS | 25.0% |
| ! | CATATATGTTGCAAAATAGA+GGG | - | tig0019461:72967-72986 | Msa1373650:CDS | 25.0% |
| ! | ACTATGTCTCTAATATATTC+AGG | - | tig0019461:73084-73103 | Msa1373650:intron | 25.0% |
| ! | TTCTCTTTGTAAGATATATG+TGG | + | tig0019461:73202-73221 | None:intergenic | 25.0% |
| ! | ATTATTGGAATCTATTGTCA+TGG | - | tig0019461:73505-73524 | Msa1373650:intron | 25.0% |
| ! | AAAAATAATAGCAGCAGATA+AGG | + | tig0019461:74043-74062 | None:intergenic | 25.0% |
| ! | AATCGCAAAGAATATGATAT+TGG | + | tig0019461:74344-74363 | None:intergenic | 25.0% |
| ! | ATTGAACTGCAAAAGTTTAA+AGG | + | tig0019461:74393-74412 | None:intergenic | 25.0% |
| ! | TCTTTATAAAAATCAGTAGC+AGG | - | tig0019461:74415-74434 | Msa1373650:CDS | 25.0% |
| ! | ACAATACTACATGATCATAT+CGG | + | tig0019461:74595-74614 | None:intergenic | 25.0% |
| ! | ATCAAGTGAAAATATGAACA+AGG | - | tig0019461:74716-74735 | Msa1373650:five_prime_UTR | 25.0% |
| ! | GCATATTAATAGTGATCTAT+CGG | - | tig0019461:74765-74784 | Msa1373650:intron | 25.0% |
| AACATAGAAGAAGATGAAGA+AGG | - | tig0019461:69949-69968 | Msa1373650:three_prime_UTR | 30.0% | |
| GAAGAGATTGTGAACAAAAA+CGG | - | tig0019461:70403-70422 | Msa1373650:intron | 30.0% | |
| ! | ATTGTTGATGCTTCTGATTT+TGG | - | tig0019461:70580-70599 | Msa1373650:intron | 30.0% |
| ! | AGCTTCTTCTTAGTTTGAAA+AGG | - | tig0019461:70626-70645 | Msa1373650:intron | 30.0% |
| ! | CTTAGTTTGAAAAGGAAAGA+TGG | - | tig0019461:70634-70653 | Msa1373650:intron | 30.0% |
| TTTATTGCCGCAGATATATA+AGG | - | tig0019461:70668-70687 | Msa1373650:intron | 30.0% | |
| TCCAAAACCTTATATATCTG+CGG | + | tig0019461:70678-70697 | None:intergenic | 30.0% | |
| AAGCTATCATGAAGAGTTTA+TGG | - | tig0019461:70908-70927 | Msa1373650:CDS | 30.0% | |
| CAACTTATGGACATTTCATA+AGG | - | tig0019461:71444-71463 | Msa1373650:intron | 30.0% | |
| TATGCAGTAGTCAATAGATA+AGG | - | tig0019461:71471-71490 | Msa1373650:intron | 30.0% | |
| GATATGTTTATGGCATGTTT+GGG | + | tig0019461:71510-71529 | None:intergenic | 30.0% | |
| AGATATGTTTATGGCATGTT+TGG | + | tig0019461:71511-71530 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTGCTTGTTTGTTT+TGG | - | tig0019461:71529-71548 | Msa1373650:intron | 30.0% |
| AAAACACTTTATGACAGAAC+TGG | + | tig0019461:72052-72071 | None:intergenic | 30.0% | |
| !! | GTTCTGTCATAAAGTGTTTT+TGG | - | tig0019461:72052-72071 | Msa1373650:CDS | 30.0% |
| TGCTCAAAACTCTATTATAG+AGG | - | tig0019461:72235-72254 | Msa1373650:CDS | 30.0% | |
| !!! | GTTAGTTTTCTAGATAACAC+TGG | - | tig0019461:72494-72513 | Msa1373650:CDS | 30.0% |
| !! | ACCACATTTTCTTTAGAAGT+TGG | + | tig0019461:72830-72849 | None:intergenic | 30.0% |
| AAGAATCCAAAGATTGTTCT+GGG | + | tig0019461:72883-72902 | None:intergenic | 30.0% | |
| AAAGAATCCAAAGATTGTTC+TGG | + | tig0019461:72884-72903 | None:intergenic | 30.0% | |
| AGTTATGCATTATACCTTGT+CGG | + | tig0019461:72921-72940 | None:intergenic | 30.0% | |
| TAACTTATCCTTGCCATTAT+TGG | - | tig0019461:72936-72955 | Msa1373650:CDS | 30.0% | |
| TATGTGGAAAACATTCAAGA+GGG | + | tig0019461:73186-73205 | None:intergenic | 30.0% | |
| ATATGTGGAAAACATTCAAG+AGG | + | tig0019461:73187-73206 | None:intergenic | 30.0% | |
| !!! | TATTTGGGCATTCTTGTTTT+TGG | - | tig0019461:73235-73254 | Msa1373650:intron | 30.0% |
| !!! | ATTTGGGCATTCTTGTTTTT+GGG | - | tig0019461:73236-73255 | Msa1373650:intron | 30.0% |
| TTGGGGAGATAAGAAATTAT+AGG | - | tig0019461:73254-73273 | Msa1373650:intron | 30.0% | |
| GAGATAAGAAATTATAGGTC+TGG | - | tig0019461:73259-73278 | Msa1373650:intron | 30.0% | |
| ATCTCGGCATCAATAAAAAA+TGG | + | tig0019461:73285-73304 | None:intergenic | 30.0% | |
| ! | TATGATTTTGCAAGTGTTCA+AGG | - | tig0019461:73681-73700 | Msa1373650:intron | 30.0% |
| TTTCAGAATTAACAGCATCA+TGG | + | tig0019461:73860-73879 | None:intergenic | 30.0% | |
| TTACGAATAAACAGGATTGT+GGG | + | tig0019461:74567-74586 | None:intergenic | 30.0% | |
| TGTTGTAATTGTCTTAGTCT+TGG | - | tig0019461:74634-74653 | Msa1373650:CDS | 30.0% | |
| GAAGAAGGAAGAAGAATCAA+CGG | - | tig0019461:69964-69983 | Msa1373650:three_prime_UTR | 35.0% | |
| !! | AAGGTTGAAGGATCGATTTT+AGG | + | tig0019461:70109-70128 | None:intergenic | 35.0% |
| ! | TCCAAATGCGTTTTCACTTT+CGG | + | tig0019461:70382-70401 | None:intergenic | 35.0% |
| !! | AAACGGTGTTGTGATTGATT+TGG | - | tig0019461:70420-70439 | Msa1373650:intron | 35.0% |
| !!! | GTTAGGGTTTTTGAGTGATT+TGG | - | tig0019461:70522-70541 | Msa1373650:intron | 35.0% |
| !!! | GGTTTTTGAGTGATTTGGTT+GGG | - | tig0019461:70527-70546 | Msa1373650:intron | 35.0% |
| ATGACATTAATGTGCTTTGC+TGG | - | tig0019461:70756-70775 | Msa1373650:CDS | 35.0% | |
| AGACTATTTGAGAGAGCTTA+TGG | + | tig0019461:70976-70995 | None:intergenic | 35.0% | |
| TATGCAGTAGTCAATAGGTA+AGG | - | tig0019461:71006-71025 | Msa1373650:CDS | 35.0% | |
| AAATTTGCGAGGGACTAAAA+TGG | - | tig0019461:71324-71343 | Msa1373650:intron | 35.0% | |
| AATTTGCGAGGGACTAAAAT+GGG | - | tig0019461:71325-71344 | Msa1373650:intron | 35.0% | |
| TTGATATTCTCCAGTCCTAA+TGG | - | tig0019461:71582-71601 | Msa1373650:intron | 35.0% | |
| CACAGTTACAAATCACTCAA+AGG | - | tig0019461:71670-71689 | Msa1373650:intron | 35.0% | |
| AAGGAGTGAAAATGTACTTC+CGG | - | tig0019461:71689-71708 | Msa1373650:intron | 35.0% | |
| CTTGAATCGTTCATTAGAGA+CGG | + | tig0019461:71826-71845 | None:intergenic | 35.0% | |
| ATATGCATCCTTCTCATCAA+AGG | + | tig0019461:71928-71947 | None:intergenic | 35.0% | |
| TCTTCTGATGAATAGACAAC+AGG | + | tig0019461:71959-71978 | None:intergenic | 35.0% | |
| !! | GTTTTGAGCAATTTCGATGA+GGG | + | tig0019461:72225-72244 | None:intergenic | 35.0% |
| !!! | AGTTTTGAGCAATTTCGATG+AGG | + | tig0019461:72226-72245 | None:intergenic | 35.0% |
| ATCGTATTTAGTGTAGAGGA+TGG | + | tig0019461:72275-72294 | None:intergenic | 35.0% | |
| ! | AGGTATCGTATTTAGTGTAG+AGG | + | tig0019461:72279-72298 | None:intergenic | 35.0% |
| GATACCTGTTTCAGAAATTG+CGG | - | tig0019461:72292-72311 | Msa1373650:CDS | 35.0% | |
| ATAAATGCTGAGTCTCCATT+CGG | - | tig0019461:72335-72354 | Msa1373650:CDS | 35.0% | |
| AAAATGGAAAAGAGCTTGAC+TGG | - | tig0019461:72365-72384 | Msa1373650:CDS | 35.0% | |
| TCCAAGAAGAGTGAAAATTC+TGG | - | tig0019461:72680-72699 | Msa1373650:CDS | 35.0% | |
| ! | ACCAGAATTTTCACTCTTCT+TGG | + | tig0019461:72684-72703 | None:intergenic | 35.0% |
| ! | TTCTGGTTGCACTAATACTA+AGG | - | tig0019461:72697-72716 | Msa1373650:CDS | 35.0% |
| TCTGGTTGCACTAATACTAA+GGG | - | tig0019461:72698-72717 | Msa1373650:CDS | 35.0% | |
| ACATGAACATTAGAAACACC+AGG | + | tig0019461:72797-72816 | None:intergenic | 35.0% | |
| ! | GCCAACTTCTAAAGAAAATG+TGG | - | tig0019461:72826-72845 | Msa1373650:CDS | 35.0% |
| AGAAAATGTGGTCCAATCTA+AGG | - | tig0019461:72838-72857 | Msa1373650:CDS | 35.0% | |
| AGAATCCAAAGATTGTTCTG+GGG | + | tig0019461:72882-72901 | None:intergenic | 35.0% | |
| ATATGAAACCCTGCCAATAA+TGG | + | tig0019461:72952-72971 | None:intergenic | 35.0% | |
| TTCCTACAAGTATCATAGCA+GGG | - | tig0019461:72994-73013 | Msa1373650:CDS | 35.0% | |
| TTCAATCCATGGTTCAACAT+GGG | + | tig0019461:73158-73177 | None:intergenic | 35.0% | |
| !!! | TTTGGGCATTCTTGTTTTTG+GGG | - | tig0019461:73237-73256 | Msa1373650:intron | 35.0% |
| CATGCAAGCATTCTTAATCT+CGG | + | tig0019461:73301-73320 | None:intergenic | 35.0% | |
| AAGAGTAGGAGAGATGTATA+AGG | + | tig0019461:73344-73363 | None:intergenic | 35.0% | |
| ATCTCTCCTACTCTTAGATT+AGG | - | tig0019461:73349-73368 | Msa1373650:intron | 35.0% | |
| AAGACACCTAATCTAAGAGT+AGG | + | tig0019461:73358-73377 | None:intergenic | 35.0% | |
| TACTCTTAGATTAGGTGTCT+TGG | - | tig0019461:73357-73376 | Msa1373650:intron | 35.0% | |
| ATTAGGTGTCTTGGAGATTT+GGG | - | tig0019461:73366-73385 | Msa1373650:intron | 35.0% | |
| !! | TCTTGTTATTCCTCATTGAC+AGG | - | tig0019461:73617-73636 | Msa1373650:intron | 35.0% |
| !! | CTTGTTATTCCTCATTGACA+GGG | - | tig0019461:73618-73637 | Msa1373650:intron | 35.0% |
| ! | TTGTTATTCCTCATTGACAG+GGG | - | tig0019461:73619-73638 | Msa1373650:intron | 35.0% |
| TATCTTCTAACCTCAATTCC+TGG | + | tig0019461:73647-73666 | None:intergenic | 35.0% | |
| TCTTGATGTGTCAACTGAAT+TGG | - | tig0019461:73707-73726 | Msa1373650:intron | 35.0% | |
| TGAATTGGCAAATGACATAG+TGG | - | tig0019461:73722-73741 | Msa1373650:intron | 35.0% | |
| GAAATACAATCAGATTCCGT+TGG | - | tig0019461:73876-73895 | Msa1373650:intron | 35.0% | |
| AACGATTACCAGTCTAAAGA+TGG | + | tig0019461:73977-73996 | None:intergenic | 35.0% | |
| GACTACGATCTATGTCAATT+AGG | + | tig0019461:74070-74089 | None:intergenic | 35.0% | |
| CACAAGAAAACAAAACAAGC+TGG | - | tig0019461:74261-74280 | Msa1373650:CDS | 35.0% | |
| ! | AGAAGAGAAAATCCAGCTTT+TGG | - | tig0019461:74447-74466 | Msa1373650:CDS | 35.0% |
| ! | GTTGATAGAGTGCTCAATTA+TGG | - | tig0019461:74471-74490 | Msa1373650:CDS | 35.0% |
| ACACTTCGATATATCTATGC+AGG | + | tig0019461:74499-74518 | None:intergenic | 35.0% | |
| CTTACGAATAAACAGGATTG+TGG | + | tig0019461:74568-74587 | None:intergenic | 35.0% | |
| ! | CGGTTTTCTTACGAATAAAC+AGG | + | tig0019461:74575-74594 | None:intergenic | 35.0% |
| !! | TGTAATTGTCTTAGTCTTGG+AGG | - | tig0019461:74637-74656 | Msa1373650:CDS | 35.0% |
| CATTACACACTAGTTGTGTA+TGG | + | tig0019461:74678-74697 | None:intergenic | 35.0% | |
| GCTCACAGTGAAGTTGAAAA+TGG | + | tig0019461:69916-69935 | None:intergenic | 40.0% | |
| AGAAGAATCAACGGTTCAGA+TGG | - | tig0019461:69973-69992 | Msa1373650:three_prime_UTR | 40.0% | |
| AATCAACGGTTCAGATGGAA+TGG | - | tig0019461:69978-69997 | Msa1373650:three_prime_UTR | 40.0% | |
| CGATTTCGCTTGTAGATTTG+AGG | + | tig0019461:70081-70100 | None:intergenic | 40.0% | |
| ! | TGAGGTAATCGATGATGATG+CGG | + | tig0019461:70231-70250 | None:intergenic | 40.0% |
| CTTCTCTGATGAACTGTTTG+AGG | + | tig0019461:70249-70268 | None:intergenic | 40.0% | |
| AATGGAAATTCCTTCACCTC+CGG | + | tig0019461:70313-70332 | None:intergenic | 40.0% | |
| ACCGAAAGTGAAAACGCATT+TGG | - | tig0019461:70378-70397 | Msa1373650:intron | 40.0% | |
| GAAAGTGAAAACGCATTTGG+AGG | - | tig0019461:70381-70400 | Msa1373650:intron | 40.0% | |
| !!! | GGGTTTTTGAGTGATTTGGT+TGG | - | tig0019461:70526-70545 | Msa1373650:intron | 40.0% |
| !!! | TTTTGGTGATGTGTTGCCTT+TGG | - | tig0019461:70597-70616 | Msa1373650:intron | 40.0% |
| !! | TTTGGTGATGTGTTGCCTTT+GGG | - | tig0019461:70598-70617 | Msa1373650:intron | 40.0% |
| ! | GCCGCAGATATATAAGGTTT+TGG | - | tig0019461:70674-70693 | Msa1373650:intron | 40.0% |
| AGCTCTCTCAAATAGTCTCA+TGG | - | tig0019461:70978-70997 | Msa1373650:CDS | 40.0% | |
| GCTCTCTCAAATAGTCTCAT+GGG | - | tig0019461:70979-70998 | Msa1373650:CDS | 40.0% | |
| GTGCTTATGCAGTAGTCAAT+AGG | - | tig0019461:71001-71020 | Msa1373650:CDS | 40.0% | |
| ! | TCTTTGCTTATTAATGGGCC+AGG | - | tig0019461:71159-71178 | Msa1373650:intron | 40.0% |
| CTAAAATGGGTCTTCACTCA+AGG | - | tig0019461:71338-71357 | Msa1373650:intron | 40.0% | |
| ! | TCGTATCTGCAGTCTCTTTT+TGG | - | tig0019461:71636-71655 | Msa1373650:intron | 40.0% |
| ! | ACCAGACACATTTGAGTTAG+TGG | + | tig0019461:71799-71818 | None:intergenic | 40.0% |
| CGTCTCTAATGAACGATTCA+AGG | - | tig0019461:71824-71843 | Msa1373650:CDS | 40.0% | |
| ATTCAAGGAAATTGCCTTGC+TGG | - | tig0019461:71839-71858 | Msa1373650:CDS | 40.0% | |
| CATGTATTTGCACATCTGCA+AGG | + | tig0019461:71875-71894 | None:intergenic | 40.0% | |
| CTATTCATCAGAAGACAACG+AGG | - | tig0019461:71964-71983 | Msa1373650:CDS | 40.0% | |
| GTCGCTACAATAGTCATGTT+GGG | - | tig0019461:72081-72100 | Msa1373650:CDS | 40.0% | |
| GTCATGTTGGGATTCATGTT+AGG | - | tig0019461:72093-72112 | Msa1373650:CDS | 40.0% | |
| ! | TCCATTCGGTGAACAGAAAA+TGG | - | tig0019461:72349-72368 | Msa1373650:CDS | 40.0% |
| ! | TCCATTTTCTGTTCACCGAA+TGG | + | tig0019461:72353-72372 | None:intergenic | 40.0% |
| GTTAGCGATCTAAATCAGCA+AGG | - | tig0019461:72398-72417 | Msa1373650:CDS | 40.0% | |
| TCCTCTATTGTTCCATCCAT+CGG | + | tig0019461:72437-72456 | None:intergenic | 40.0% | |
| CCATCTTTGCATCAACAACT+CGG | + | tig0019461:72475-72494 | None:intergenic | 40.0% | |
| !! | CCTTTACCTTCAGAAGTATC+AGG | + | tig0019461:72554-72573 | None:intergenic | 40.0% |
| ! | CCTGATACTTCTGAAGGTAA+AGG | - | tig0019461:72551-72570 | Msa1373650:CDS | 40.0% |
| ! | TTCTGAAGGTAAAGGTGATG+TGG | - | tig0019461:72559-72578 | Msa1373650:CDS | 40.0% |
| TTGAGGGGTTTGATCATTCT+GGG | - | tig0019461:72591-72610 | Msa1373650:CDS | 40.0% | |
| TTCCCAGATGAATGAAGCAA+GGG | + | tig0019461:72644-72663 | None:intergenic | 40.0% | |
| ATTCCCAGATGAATGAAGCA+AGG | + | tig0019461:72645-72664 | None:intergenic | 40.0% | |
| ! | TTTTCACTCTTCTTGGATCC+AGG | + | tig0019461:72677-72696 | None:intergenic | 40.0% |
| CTGGTTGCACTAATACTAAG+GGG | - | tig0019461:72699-72718 | Msa1373650:CDS | 40.0% | |
| TGGTTGCACTAATACTAAGG+GGG | - | tig0019461:72700-72719 | Msa1373650:CDS | 40.0% | |
| AGGGGTTAGAAACCTTAGAT+TGG | + | tig0019461:72853-72872 | None:intergenic | 40.0% | |
| ! | ATCTAAGGTTTCTAACCCCT+CGG | - | tig0019461:72853-72872 | Msa1373650:CDS | 40.0% |
| TTATCCTTGCCATTATTGGC+AGG | - | tig0019461:72940-72959 | Msa1373650:CDS | 40.0% | |
| TATCCTTGCCATTATTGGCA+GGG | - | tig0019461:72941-72960 | Msa1373650:CDS | 40.0% | |
| GTTCCTACAAGTATCATAGC+AGG | - | tig0019461:72993-73012 | Msa1373650:CDS | 40.0% | |
| AGTAAGCACAATAGACCACA+AGG | + | tig0019461:73060-73079 | None:intergenic | 40.0% | |
| CTTCAATCCATGGTTCAACA+TGG | + | tig0019461:73159-73178 | None:intergenic | 40.0% | |
| CGAGATTAAGAATGCTTGCA+TGG | - | tig0019461:73299-73318 | Msa1373650:intron | 40.0% | |
| GATTAGGTGTCTTGGAGATT+TGG | - | tig0019461:73365-73384 | Msa1373650:intron | 40.0% | |
| CAATCAGTTAAGTGCAGAGT+GGG | + | tig0019461:73569-73588 | None:intergenic | 40.0% | |
| CAAATGACATAGTGGTGCAA+GGG | - | tig0019461:73730-73749 | Msa1373650:intron | 40.0% | |
| TATTCCACACCATACACATG+TGG | + | tig0019461:73829-73848 | None:intergenic | 40.0% | |
| AACTGGACACATGAATCCAA+CGG | + | tig0019461:73895-73914 | None:intergenic | 40.0% | |
| ATTCATGTGTCCAGTTTGCA+AGG | - | tig0019461:73899-73918 | Msa1373650:intron | 40.0% | |
| ! | GAGATTTTTGCCTTGCAAAC+TGG | + | tig0019461:73912-73931 | None:intergenic | 40.0% |
| GTTTGCAAGGCAAAAATCTC+TGG | - | tig0019461:73912-73931 | Msa1373650:intron | 40.0% | |
| CTCTGGTCAAATCAATGTGT+TGG | - | tig0019461:73929-73948 | Msa1373650:intron | 40.0% | |
| CAAATCAATGTGTTGGACAG+TGG | - | tig0019461:73936-73955 | Msa1373650:intron | 40.0% | |
| CGATGCACTCAGTTTATCAA+AGG | + | tig0019461:74170-74189 | None:intergenic | 40.0% | |
| TTGATAAACTGAGTGCATCG+TGG | - | tig0019461:74170-74189 | Msa1373650:CDS | 40.0% | |
| ACTCTATCAACTCCAAAAGC+TGG | + | tig0019461:74462-74481 | None:intergenic | 40.0% | |
| ATACAACATACAGCGAGTCA+AGG | + | tig0019461:74539-74558 | None:intergenic | 40.0% | |
| GTGTATGGAGTTCCATTGAA+CGG | + | tig0019461:74663-74682 | None:intergenic | 40.0% | |
| ! | GCTTGTAGATTTGAGGTCGA+AGG | + | tig0019461:70074-70093 | None:intergenic | 45.0% |
| ! | AGCTCAACAGTGTCGAACTT+CGG | + | tig0019461:70274-70293 | None:intergenic | 45.0% |
| AGTTCGACACTGTTGAGCTT+CGG | - | tig0019461:70275-70294 | Msa1373650:intron | 45.0% | |
| GCTTCGGAATCCTTCAATTC+CGG | - | tig0019461:70291-70310 | Msa1373650:intron | 45.0% | |
| GGAGGTGAAGGAATTTCCAT+TGG | - | tig0019461:70312-70331 | Msa1373650:intron | 45.0% | |
| GAATTTCCATTGGCATTGCC+TGG | - | tig0019461:70322-70341 | Msa1373650:intron | 45.0% | |
| AAGTGAGGAAGAGGAAGAGA+GGG | - | tig0019461:70350-70369 | Msa1373650:intron | 45.0% | |
| !! | CGGTGTTGTGATTGATTTGG+CGG | - | tig0019461:70423-70442 | Msa1373650:intron | 45.0% |
| !! | GATTGATTTGGCGGCGTTAT+CGG | - | tig0019461:70432-70451 | Msa1373650:intron | 45.0% |
| AAGGAGGAAGAGGAGTTGTT+AGG | - | tig0019461:70505-70524 | Msa1373650:intron | 45.0% | |
| AGGAGGAAGAGGAGTTGTTA+GGG | - | tig0019461:70506-70525 | Msa1373650:intron | 45.0% | |
| AGAAGAAGCTTCCATCCCAA+AGG | + | tig0019461:70616-70635 | None:intergenic | 45.0% | |
| AAAGGAAAGATGGTCGTGCT+TGG | - | tig0019461:70644-70663 | Msa1373650:intron | 45.0% | |
| ! | TTATTAATGGGCCAGGAGTG+AGG | - | tig0019461:71166-71185 | Msa1373650:intron | 45.0% |
| AAAGGAAAACTCCTCACTCC+TGG | + | tig0019461:71180-71199 | None:intergenic | 45.0% | |
| CTAACATGGGCTCACATCAA+AGG | + | tig0019461:71198-71217 | None:intergenic | 45.0% | |
| CTTTGATGTGAGCCCATGTT+AGG | - | tig0019461:71196-71215 | Msa1373650:intron | 45.0% | |
| TTGGGCACAAGAAATTTGCG+AGG | - | tig0019461:71313-71332 | Msa1373650:intron | 45.0% | |
| TGGGCACAAGAAATTTGCGA+GGG | - | tig0019461:71314-71333 | Msa1373650:intron | 45.0% | |
| AAACTGCTGTCCATTAGGAC+TGG | + | tig0019461:71595-71614 | None:intergenic | 45.0% | |
| GACAGAAACTGCTGTCCATT+AGG | + | tig0019461:71600-71619 | None:intergenic | 45.0% | |
| TCAGTAGTCACTCTCTGTTC+CGG | + | tig0019461:71711-71730 | None:intergenic | 45.0% | |
| TAGTGGCAACAATCTGTCGT+TGG | + | tig0019461:71782-71801 | None:intergenic | 45.0% | |
| GCCACTAACTCAAATGTGTC+TGG | - | tig0019461:71795-71814 | Msa1373650:CDS | 45.0% | |
| GGAAATTGCCTTGCTGGAAA+TGG | - | tig0019461:71845-71864 | Msa1373650:CDS | 45.0% | |
| AAGGTTCTCCATTTCCAGCA+AGG | + | tig0019461:71856-71875 | None:intergenic | 45.0% | |
| CAGCTTGACCTTTGATGAGA+AGG | - | tig0019461:71917-71936 | Msa1373650:CDS | 45.0% | |
| TTCATCAGAAGACAACGAGG+CGG | - | tig0019461:71967-71986 | Msa1373650:CDS | 45.0% | |
| CTTGGTTCATCCGTTTCAGA+TGG | - | tig0019461:71996-72015 | Msa1373650:CDS | 45.0% | |
| CGTCGCTACAATAGTCATGT+TGG | - | tig0019461:72080-72099 | Msa1373650:CDS | 45.0% | |
| ACCTTCAAGGATCACGAAGA+TGG | - | tig0019461:72196-72215 | Msa1373650:CDS | 45.0% | |
| TCCATCTTCGTGATCCTTGA+AGG | + | tig0019461:72200-72219 | None:intergenic | 45.0% | |
| !! | CCAACCGCAATTTCTGAAAC+AGG | + | tig0019461:72299-72318 | None:intergenic | 45.0% |
| CCTGTTTCAGAAATTGCGGT+TGG | - | tig0019461:72296-72315 | Msa1373650:CDS | 45.0% | |
| ACCGATGGATGGAACAATAG+AGG | - | tig0019461:72433-72452 | Msa1373650:CDS | 45.0% | |
| CCGAGTTGTTGATGCAAAGA+TGG | - | tig0019461:72472-72491 | Msa1373650:CDS | 45.0% | |
| GATGCACCTGATACTTCTGA+AGG | - | tig0019461:72545-72564 | Msa1373650:CDS | 45.0% | |
| GTTGAGGGGTTTGATCATTC+TGG | - | tig0019461:72590-72609 | Msa1373650:CDS | 45.0% | |
| AGTCCCTTGCTTCATTCATC+TGG | - | tig0019461:72638-72657 | Msa1373650:CDS | 45.0% | |
| GTCCCTTGCTTCATTCATCT+GGG | - | tig0019461:72639-72658 | Msa1373650:CDS | 45.0% | |
| TCTGGGAATCACATGAAACC+TGG | - | tig0019461:72656-72675 | Msa1373650:CDS | 45.0% | |
| GATAGCTGCAATGATGTACC+TGG | - | tig0019461:72776-72795 | Msa1373650:CDS | 45.0% | |
| GGTATCCCCAGAACAATCTT+TGG | - | tig0019461:72874-72893 | Msa1373650:CDS | 45.0% | |
| AAACCCTGCCAATAATGGCA+AGG | + | tig0019461:72947-72966 | None:intergenic | 45.0% | |
| GACCCTGCTATGATACTTGT+AGG | + | tig0019461:72999-73018 | None:intergenic | 45.0% | |
| AGCAGGGTCTTCTTAAAACG+TGG | - | tig0019461:73010-73029 | Msa1373650:CDS | 45.0% | |
| GACCACAAGGCATGCATAAA+GGG | + | tig0019461:73047-73066 | None:intergenic | 45.0% | |
| AGACCACAAGGCATGCATAA+AGG | + | tig0019461:73048-73067 | None:intergenic | 45.0% | |
| ACAAAGCCCATGTTGAACCA+TGG | - | tig0019461:73149-73168 | Msa1373650:intron | 45.0% | |
| ! | GTTGAAAGTACACAAGCACG+TGG | + | tig0019461:73415-73434 | None:intergenic | 45.0% |
| CCAATCAGTTAAGTGCAGAG+TGG | + | tig0019461:73570-73589 | None:intergenic | 45.0% | |
| CCACTCTGCACTTAACTGAT+TGG | - | tig0019461:73567-73586 | Msa1373650:intron | 45.0% | |
| GCAAATGACATAGTGGTGCA+AGG | - | tig0019461:73729-73748 | Msa1373650:intron | 45.0% | |
| AGCTCACAACCACATGTGTA+TGG | - | tig0019461:73817-73836 | Msa1373650:intron | 45.0% | |
| ACAACCACATGTGTATGGTG+TGG | - | tig0019461:73822-73841 | Msa1373650:intron | 45.0% | |
| GTCTAAAGATGGCCAGCATT+TGG | + | tig0019461:73966-73985 | None:intergenic | 45.0% | |
| AATGCTGGCCATCTTTAGAC+TGG | - | tig0019461:73966-73985 | Msa1373650:intron | 45.0% | |
| ATACGCACCAGTGTCTGAAT+TGG | - | tig0019461:74141-74160 | Msa1373650:CDS | 45.0% | |
| !!! | AAAAAATTATTACTTTATTT+GGG | - | tig0019461:73220-73239 | Msa1373650:intron | 5.0% |
| AGAGTGGGAGTAGGAAGAAG+TGG | + | tig0019461:70196-70215 | None:intergenic | 50.0% | |
| ! | ATCGATGATGATGCGGTGGT+CGG | + | tig0019461:70224-70243 | None:intergenic | 50.0% |
| ! | GGTAATCGATGATGATGCGG+TGG | + | tig0019461:70228-70247 | None:intergenic | 50.0% |
| TCGGAATCCTTCAATTCCGG+AGG | - | tig0019461:70294-70313 | Msa1373650:intron | 50.0% | |
| TCCTTCAATTCCGGAGGTGA+AGG | - | tig0019461:70300-70319 | Msa1373650:intron | 50.0% | |
| TCCTTCACCTCCGGAATTGA+AGG | + | tig0019461:70304-70323 | None:intergenic | 50.0% | |
| TTTCCATTGGCATTGCCTGG+TGG | - | tig0019461:70325-70344 | Msa1373650:intron | 50.0% | |
| GAAGTGAGGAAGAGGAAGAG+AGG | - | tig0019461:70349-70368 | Msa1373650:intron | 50.0% | |
| !! | TGAGTGATTTGGTTGGGCAG+TGG | - | tig0019461:70533-70552 | Msa1373650:intron | 50.0% |
| !! | GAGTGATTTGGTTGGGCAGT+GGG | - | tig0019461:70534-70553 | Msa1373650:intron | 50.0% |
| !! | AGTGATTTGGTTGGGCAGTG+GGG | - | tig0019461:70535-70554 | Msa1373650:intron | 50.0% |
| ! | GTGATGTGTTGCCTTTGGGA+TGG | - | tig0019461:70602-70621 | Msa1373650:intron | 50.0% |
| GAGGAGAGCTGAAGATTTGC+CGG | - | tig0019461:72124-72143 | Msa1373650:CDS | 50.0% | |
| AGGAGAGCTGAAGATTTGCC+GGG | - | tig0019461:72125-72144 | Msa1373650:CDS | 50.0% | |
| TCTTCTGCTCCCAGGACATT+AGG | + | tig0019461:72155-72174 | None:intergenic | 50.0% | |
| AGCAGAAGAGTCTCCAGTCA+CGG | - | tig0019461:72166-72185 | Msa1373650:CDS | 50.0% | |
| TCACGGATGAGACACCTTCA+AGG | - | tig0019461:72183-72202 | Msa1373650:CDS | 50.0% | |
| AGGTAGTCCTCGTTTACCGA+TGG | - | tig0019461:72418-72437 | Msa1373650:CDS | 50.0% | |
| AGTCCTCGTTTACCGATGGA+TGG | - | tig0019461:72422-72441 | Msa1373650:CDS | 50.0% | |
| GTTCCATCCATCGGTAAACG+AGG | + | tig0019461:72428-72447 | None:intergenic | 50.0% | |
| ! | CATTCTGGGAGTGAACTGCA+AGG | - | tig0019461:72605-72624 | Msa1373650:CDS | 50.0% |
| !! | ATTGTTCTGGGGATACCGAG+GGG | + | tig0019461:72871-72890 | None:intergenic | 50.0% |
| !! | GATTGTTCTGGGGATACCGA+GGG | + | tig0019461:72872-72891 | None:intergenic | 50.0% |
| !! | AGATTGTTCTGGGGATACCG+AGG | + | tig0019461:72873-72892 | None:intergenic | 50.0% |
| TTCTGCATTCAGCTCCGACA+AGG | - | tig0019461:72904-72923 | Msa1373650:CDS | 50.0% | |
| AGCCCTTTATGCATGCCTTG+TGG | - | tig0019461:73042-73061 | Msa1373650:CDS | 50.0% | |
| !! | AGAGGGAGCACTTCAATCCA+TGG | + | tig0019461:73169-73188 | None:intergenic | 50.0% |
| AGGTGTCTTGGAGATTTGGG+TGG | - | tig0019461:73369-73388 | Msa1373650:intron | 50.0% | |
| TGGCGCTAGTTGCAAGGTTA+TGG | - | tig0019461:73389-73408 | Msa1373650:intron | 50.0% | |
| TTGTGATGCAGACTGAGCTG+AGG | + | tig0019461:73766-73785 | None:intergenic | 50.0% | |
| GACAGTGGATCACCAAATGC+TGG | - | tig0019461:73951-73970 | Msa1373650:intron | 50.0% | |
| AAGGTCGCCAATTCAGACAC+TGG | + | tig0019461:74151-74170 | None:intergenic | 50.0% | |
| CGTGGCGTGGGTCATATTAT+TGG | - | tig0019461:74188-74207 | Msa1373650:CDS | 50.0% | |
| ! | TAGTCTTGGAGGCCGTTCAA+TGG | - | tig0019461:74648-74667 | Msa1373650:CDS | 50.0% |
| GCGCTGTGGTTGAAGGTTGA+AGG | + | tig0019461:70121-70140 | None:intergenic | 55.0% | |
| TCAACCTTCAACCACAGCGC+TGG | - | tig0019461:70121-70140 | Msa1373650:three_prime_UTR | 55.0% | |
| CAACCTTCAACCACAGCGCT+GGG | - | tig0019461:70122-70141 | Msa1373650:three_prime_UTR | 55.0% | |
| GTGGGAGTAGGAAGAAGTGG+CGG | + | tig0019461:70193-70212 | None:intergenic | 55.0% | |
| ! | ATGATGATGCGGTGGTCGGA+GGG | + | tig0019461:70220-70239 | None:intergenic | 55.0% |
| TCACCACCAGGCAATGCCAA+TGG | + | tig0019461:70331-70350 | None:intergenic | 55.0% | |
| ! | CATTGCCTGGTGGTGAAGTG+AGG | - | tig0019461:70335-70354 | Msa1373650:intron | 55.0% |
| CTCTTCCTCACTTCACCACC+AGG | + | tig0019461:70343-70362 | None:intergenic | 55.0% | |
| ! | CTGGTGGTGAAGTGAGGAAG+AGG | - | tig0019461:70341-70360 | Msa1373650:intron | 55.0% |
| TGAGGAAGAGGAAGAGAGGG+AGG | - | tig0019461:70353-70372 | Msa1373650:intron | 55.0% | |
| ! | TGATTTGGCGGCGTTATCGG+AGG | - | tig0019461:70435-70454 | Msa1373650:intron | 55.0% |
| GAGATAGCGAGAAGGACGGA+GGG | - | tig0019461:70478-70497 | Msa1373650:intron | 55.0% | |
| AGATAGCGAGAAGGACGGAG+GGG | - | tig0019461:70479-70498 | Msa1373650:intron | 55.0% | |
| GAGAAGGACGGAGGGGTTAA+AGG | - | tig0019461:70486-70505 | Msa1373650:intron | 55.0% | |
| AAGGACGGAGGGGTTAAAGG+AGG | - | tig0019461:70489-70508 | Msa1373650:intron | 55.0% | |
| GGAGGGGTTAAAGGAGGAAG+AGG | - | tig0019461:70495-70514 | Msa1373650:intron | 55.0% | |
| GAAGTAGGAGGAGGAAGAGG+AGG | - | tig0019461:70557-70576 | Msa1373650:intron | 55.0% | |
| !! | ACAACGAGGCGGTATCGACT+TGG | - | tig0019461:71978-71997 | Msa1373650:CDS | 55.0% |
| !! | GAAGGTGTCTCATCCGTGAC+TGG | + | tig0019461:72182-72201 | None:intergenic | 55.0% |
| !! | TGATGTGGCGCTGACTGTTG+AGG | - | tig0019461:72574-72593 | Msa1373650:CDS | 55.0% |
| !! | GATGTGGCGCTGACTGTTGA+GGG | - | tig0019461:72575-72594 | Msa1373650:CDS | 55.0% |
| !! | ATGTGGCGCTGACTGTTGAG+GGG | - | tig0019461:72576-72595 | Msa1373650:CDS | 55.0% |
| TTTGGGTGGCGCTAGTTGCA+AGG | - | tig0019461:73383-73402 | Msa1373650:intron | 55.0% | |
| TCCTCATTGACAGGGGTTCC+AGG | - | tig0019461:73626-73645 | Msa1373650:intron | 55.0% | |
| TCCTGGAACCCCTGTCAATG+AGG | + | tig0019461:73630-73649 | None:intergenic | 55.0% | |
| GACAGGGGTTCCAGGAATTG+AGG | - | tig0019461:73634-73653 | Msa1373650:intron | 55.0% | |
| AAACTGAGTGCATCGTGGCG+TGG | - | tig0019461:74175-74194 | Msa1373650:CDS | 55.0% | |
| AACTGAGTGCATCGTGGCGT+GGG | - | tig0019461:74176-74195 | Msa1373650:CDS | 55.0% | |
| ! | TGATGATGCGGTGGTCGGAG+GGG | + | tig0019461:70219-70238 | None:intergenic | 60.0% |
| ! | GATGATGATGCGGTGGTCGG+AGG | + | tig0019461:70221-70240 | None:intergenic | 60.0% |
| TTTGGCGGCGTTATCGGAGG+TGG | - | tig0019461:70438-70457 | Msa1373650:intron | 60.0% | |
| ! | GGAGGTGGAGCATCCGTTTG+CGG | - | tig0019461:70453-70472 | Msa1373650:intron | 60.0% |
| CTCGCTATCTCCGCCGCAAA+CGG | + | tig0019461:70469-70488 | None:intergenic | 60.0% | |
| TTGCGGCGGAGATAGCGAGA+AGG | - | tig0019461:70470-70489 | Msa1373650:intron | 60.0% | |
| GGCGGAGATAGCGAGAAGGA+CGG | - | tig0019461:70474-70493 | Msa1373650:intron | 60.0% | |
| GGAGATAGCGAGAAGGACGG+AGG | - | tig0019461:70477-70496 | Msa1373650:intron | 60.0% | |
| TGGTTGGGCAGTGGGGAAGT+AGG | - | tig0019461:70542-70561 | Msa1373650:intron | 60.0% | |
| TTGGGCAGTGGGGAAGTAGG+AGG | - | tig0019461:70545-70564 | Msa1373650:intron | 60.0% | |
| GGGGAAGTAGGAGGAGGAAG+AGG | - | tig0019461:70554-70573 | Msa1373650:intron | 60.0% | |
| GGCAACAGAAGCAGCAGCAG+GGG | + | tig0019461:71745-71764 | None:intergenic | 60.0% | |
| GGGCAACAGAAGCAGCAGCA+GGG | + | tig0019461:71746-71765 | None:intergenic | 60.0% | |
| CCCAGGACATTAGGCTGACC+CGG | + | tig0019461:72146-72165 | None:intergenic | 60.0% | |
| CCGGGTCAGCCTAATGTCCT+GGG | - | tig0019461:72143-72162 | Msa1373650:CDS | 60.0% | |
| CTGGAGACTCTTCTGCTCCC+AGG | + | tig0019461:72163-72182 | None:intergenic | 60.0% | |
| GGACCCAGCGCTGTGGTTGA+AGG | + | tig0019461:70128-70147 | None:intergenic | 65.0% | |
| AGGTCGGGAGTAGGTGCGGT+GGG | + | tig0019461:70149-70168 | None:intergenic | 65.0% | |
| GGTGAGGTCGGGAGTAGGTG+CGG | + | tig0019461:70153-70172 | None:intergenic | 65.0% | |
| TCGGAGGGGAGAGTGGGAGT+AGG | + | tig0019461:70205-70224 | None:intergenic | 65.0% | |
| ! | GGTGGAGCATCCGTTTGCGG+CGG | - | tig0019461:70456-70475 | Msa1373650:intron | 65.0% |
| GGCAGTGGGGAAGTAGGAGG+AGG | - | tig0019461:70548-70567 | Msa1373650:intron | 65.0% | |
| CGGGCAACAGAAGCAGCAGC+AGG | + | tig0019461:71747-71766 | None:intergenic | 65.0% | |
| ! | TGCTGCTTCTGTTGCCCGCG+AGG | - | tig0019461:71749-71768 | Msa1373650:CDS | 65.0% |
| TTCTGTTGCCCGCGAGGAGC+AGG | - | tig0019461:71755-71774 | Msa1373650:CDS | 65.0% | |
| TCGTTGGTCCTGCTCCTCGC+GGG | + | tig0019461:71766-71785 | None:intergenic | 65.0% | |
| GTCGTTGGTCCTGCTCCTCG+CGG | + | tig0019461:71767-71786 | None:intergenic | 65.0% | |
| GCCGGGTCAGCCTAATGTCC+TGG | - | tig0019461:72142-72161 | Msa1373650:CDS | 65.0% | |
| GAGGTCGGGAGTAGGTGCGG+TGG | + | tig0019461:70150-70169 | None:intergenic | 70.0% | |
| TCGGCGGTGAGGTCGGGAGT+AGG | + | tig0019461:70158-70177 | None:intergenic | 70.0% | |
| GCGACATCGGCGGTGAGGTC+GGG | + | tig0019461:70164-70183 | None:intergenic | 70.0% | |
| CGCGACATCGGCGGTGAGGT+CGG | + | tig0019461:70165-70184 | None:intergenic | 70.0% | |
| CGGTGGTCGGAGGGGAGAGT+GGG | + | tig0019461:70211-70230 | None:intergenic | 70.0% | |
| TGCGGTGGGACCCAGCGCTG+TGG | + | tig0019461:70135-70154 | None:intergenic | 75.0% | |
| GCGACGCGACATCGGCGGTG+AGG | + | tig0019461:70169-70188 | None:intergenic | 75.0% | |
| GTGGCGGCGCGACGCGACAT+CGG | + | tig0019461:70177-70196 | None:intergenic | 75.0% | |
| GCGGTGGTCGGAGGGGAGAG+TGG | + | tig0019461:70212-70231 | None:intergenic | 75.0% | |
| ! | GCGGCGCGACGCGACATCGG+CGG | + | tig0019461:70174-70193 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019461 | gene | 69871 | 74803 | 69871 | ID=Msa1373650;Name=Msa1373650 |
| tig0019461 | mRNA | 69871 | 74803 | 69871 | ID=Msa1373650-mRNA-1;Parent=Msa1373650;Name=Msa1373650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=66|1|1|1|0.5|0.2|5|401|800 |
| tig0019461 | exon | 69871 | 70267 | 69871 | ID=Msa1373650-mRNA-1:exon:3497;Parent=Msa1373650-mRNA-1 |
| tig0019461 | exon | 70687 | 71035 | 70687 | ID=Msa1373650-mRNA-1:exon:3496;Parent=Msa1373650-mRNA-1 |
| tig0019461 | exon | 71749 | 73078 | 71749 | ID=Msa1373650-mRNA-1:exon:3495;Parent=Msa1373650-mRNA-1 |
| tig0019461 | exon | 73985 | 74755 | 73985 | ID=Msa1373650-mRNA-1:exon:3494;Parent=Msa1373650-mRNA-1 |
| tig0019461 | exon | 74781 | 74803 | 74781 | ID=Msa1373650-mRNA-1:exon:3493;Parent=Msa1373650-mRNA-1 |
| tig0019461 | five_prime_UTR | 74781 | 74803 | 74781 | ID=Msa1373650-mRNA-1:five_prime_utr;Parent=Msa1373650-mRNA-1 |
| tig0019461 | five_prime_UTR | 74713 | 74755 | 74713 | ID=Msa1373650-mRNA-1:five_prime_utr;Parent=Msa1373650-mRNA-1 |
| tig0019461 | CDS | 73985 | 74712 | 73985 | ID=Msa1373650-mRNA-1:cds;Parent=Msa1373650-mRNA-1 |
| tig0019461 | CDS | 71749 | 73078 | 71749 | ID=Msa1373650-mRNA-1:cds;Parent=Msa1373650-mRNA-1 |
| tig0019461 | CDS | 70691 | 71035 | 70691 | ID=Msa1373650-mRNA-1:cds;Parent=Msa1373650-mRNA-1 |
| tig0019461 | three_prime_UTR | 70687 | 70690 | 70687 | ID=Msa1373650-mRNA-1:three_prime_utr;Parent=Msa1373650-mRNA-1 |
| tig0019461 | three_prime_UTR | 69871 | 70267 | 69871 | ID=Msa1373650-mRNA-1:three_prime_utr;Parent=Msa1373650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
