Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057850 | XP_003589555.1 | 99.492 | 394 | 2 | 0 | 1 | 394 | 90 | 483 | 0.0 | 812 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057850 | sp|Q9LNU4|PSD3A_ARATH | 86.224 | 392 | 54 | 0 | 1 | 392 | 96 | 487 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057850 | G7I8C5 | 99.492 | 394 | 2 | 0 | 1 | 394 | 90 | 483 | 0.0 | 812 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0057850 | Msa0102910 | 0.941725 | 2.520776e-101 | -8.615850e-47 |
| Msa0057850 | Msa0385030 | 0.802006 | 6.883829e-49 | -8.615850e-47 |
| Msa0057850 | Msa0880050 | 0.802299 | 5.991633e-49 | -8.615850e-47 |
| Msa0057850 | Msa1167360 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
| Msa0057850 | Msa1218610 | 0.826419 | 2.741011e-54 | -8.615850e-47 |
| Msa0057850 | Msa1423050 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057850 | MtrunA17_Chr1g0157071 | 99.492 | 394 | 2 | 0 | 1 | 394 | 90 | 483 | 0.0 | 812 |
| Msa0057850 | MtrunA17_Chr3g0143291 | 90.886 | 395 | 32 | 2 | 1 | 392 | 96 | 489 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057850 | AT1G20200.1 | 86.224 | 392 | 54 | 0 | 1 | 392 | 96 | 487 | 0.0 | 681 |
| Msa0057850 | AT1G75990.1 | 84.694 | 392 | 59 | 1 | 1 | 392 | 96 | 486 | 0.0 | 648 |
Find 107 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTTTCTCCATTCCTTTC+TGG | 0.122328 | 1_2:-14049246 | None:intergenic |
| CATTATAGTTCGTTTACTTT+TGG | 0.198744 | 1_2:+14049195 | Msa0057850:CDS |
| CTCAGTTGGCCTTTAATTCT+AGG | 0.207279 | 1_2:+14051772 | Msa0057850:CDS |
| CAATCGAACGATCAAATTAT+TGG | 0.209366 | 1_2:-14051520 | None:intergenic |
| AAATAAATAGTGAATATTTC+AGG | 0.220254 | 1_2:-14052092 | None:intergenic |
| AAAGGCAATCCTAGAATTAA+AGG | 0.262839 | 1_2:-14051781 | None:intergenic |
| TCAGGGATCTTCCATCTAAA+AGG | 0.273199 | 1_2:-14052074 | None:intergenic |
| TTGGTGATTTAGAGCTCTTT+AGG | 0.313974 | 1_2:+14051454 | Msa0057850:CDS |
| GTTTCACAAAGATGGTATTA+AGG | 0.331812 | 1_2:-14052042 | None:intergenic |
| TCATATAGCTATGAGCTTAC+TGG | 0.344076 | 1_2:+14048501 | Msa0057850:CDS |
| TTGTGAAATTTCAGGCTGTT+AGG | 0.344302 | 1_2:+14051430 | Msa0057850:intron |
| CAAAAGTAAACGAACTATAA+TGG | 0.378151 | 1_2:-14049194 | None:intergenic |
| TGGATGGTGTCCAAGGAAAT+TGG | 0.379526 | 1_2:+14051726 | Msa0057850:CDS |
| TCTTCTACCTCGGGAAAATT+CGG | 0.395517 | 1_2:+14049068 | Msa0057850:CDS |
| TCCAGCCAAGCACTTGTTGC+CGG | 0.406869 | 1_2:+14048232 | Msa0057850:CDS |
| ACTTCTCTGCCTGATCATAT+AGG | 0.408449 | 1_2:-14048860 | None:intergenic |
| GTAAATATCTCCAATTTCCT+TGG | 0.409981 | 1_2:-14051736 | None:intergenic |
| TTCGAATTCAGTGTAACAAA+TGG | 0.419716 | 1_2:+14049170 | Msa0057850:CDS |
| GGAGAGATCCTGACAGCAAT+TGG | 0.432817 | 1_2:-14051985 | None:intergenic |
| TTAGAACGAATGAAAATAAC+GGG | 0.436922 | 1_2:-14052320 | None:intergenic |
| CGAAAACCCTGTGCTGCAAC+TGG | 0.443308 | 1_2:-14049151 | None:intergenic |
| GCTAGCTGAGGAACAAGCTT+TGG | 0.450773 | 1_2:-14048409 | None:intergenic |
| GCGACATTGGATCATGCTAA+TGG | 0.451268 | 1_2:+14051702 | Msa0057850:CDS |
| TGTCGCTATCTCTTCTACCT+CGG | 0.453989 | 1_2:+14049058 | Msa0057850:CDS |
| ATTGTGCATGTTAAGACAAA+AGG | 0.457200 | 1_2:-14051799 | None:intergenic |
| TTATCTTACCAATTGCTGTC+AGG | 0.462795 | 1_2:+14051977 | Msa0057850:three_prime_UTR |
| TCCGGCAACAAGTGCTTGGC+TGG | 0.465143 | 1_2:-14048233 | None:intergenic |
| TTCACTAATTATATATTGCT+AGG | 0.467376 | 1_2:+14052229 | Msa0057850:three_prime_UTR |
| AATAAATAGTGAATATTTCA+GGG | 0.469255 | 1_2:-14052091 | None:intergenic |
| GTCGCTATCTCTTCTACCTC+GGG | 0.471871 | 1_2:+14049059 | Msa0057850:CDS |
| TAAAGCACCAGTTGCAGCAC+AGG | 0.474666 | 1_2:+14049144 | Msa0057850:CDS |
| TTTCTATTGGGTGTATAGGA+TGG | 0.475642 | 1_2:+14048161 | Msa0057850:five_prime_UTR |
| TTTAGAACGAATGAAAATAA+CGG | 0.481530 | 1_2:-14052321 | None:intergenic |
| GATAAACATGAGGGAGCAAA+TGG | 0.481802 | 1_2:-14052006 | None:intergenic |
| TAGCTCCGGCAACAAGTGCT+TGG | 0.485009 | 1_2:-14048237 | None:intergenic |
| TTTATTGATTATTTGACGGT+AGG | 0.486839 | 1_2:+14052289 | Msa0057850:three_prime_UTR |
| TCGAATTCAGTGTAACAAAT+GGG | 0.489906 | 1_2:+14049171 | Msa0057850:CDS |
| ACATTAGTAAGTTCAAAGTA+AGG | 0.496258 | 1_2:-14049274 | None:intergenic |
| AAGGAATGGAGAAAGCTTTG+AGG | 0.498396 | 1_2:+14049251 | Msa0057850:CDS |
| GGAGATCTTGCTGAAATTCG+AGG | 0.500197 | 1_2:+14048522 | Msa0057850:CDS |
| ATCATATTCTCGCATCTCAC+TGG | 0.503942 | 1_2:+14051584 | Msa0057850:CDS |
| GGCGTAATATGTTGTTCTGT+CGG | 0.506845 | 1_2:+14052251 | Msa0057850:three_prime_UTR |
| GTTCCTCAGCTAGCATTGAT+CGG | 0.507928 | 1_2:+14048418 | Msa0057850:CDS |
| TGCAAAAGAGTCTCTCCTGC+AGG | 0.518992 | 1_2:+14049114 | Msa0057850:CDS |
| GCGCCATGATGAGCTTGGTC+AGG | 0.519144 | 1_2:+14048720 | Msa0057850:CDS |
| GATTGCGTCATAATGTCATC+AGG | 0.522018 | 1_2:+14051538 | Msa0057850:CDS |
| CGTCATAATGTCATCAGGAC+TGG | 0.522279 | 1_2:+14051543 | Msa0057850:CDS |
| CAATCCGGTGCAACTGAAAG+AGG | 0.522728 | 1_2:-14048690 | None:intergenic |
| TATCAAAGGCTATCCGTGAT+GGG | 0.525169 | 1_2:+14051670 | Msa0057850:CDS |
| ATGCTTTCAGCATCAGCAAT+GGG | 0.526668 | 1_2:-14051645 | None:intergenic |
| CCACTACAACCTATATGATC+AGG | 0.528458 | 1_2:+14048851 | Msa0057850:CDS |
| GTGCTTTACGAGCAGCCTGC+AGG | 0.528769 | 1_2:-14049129 | None:intergenic |
| TCACTAATTATATATTGCTA+GGG | 0.529252 | 1_2:+14052230 | Msa0057850:three_prime_UTR |
| CTCTACAAATGAGCCTCAGT+TGG | 0.532972 | 1_2:+14051758 | Msa0057850:CDS |
| GAAAATTCGGACCATTCAGT+TGG | 0.533575 | 1_2:+14049081 | Msa0057850:CDS |
| TGGACAAAGATAGTCCTCTC+AGG | 0.539150 | 1_2:-14049226 | None:intergenic |
| TTGCTGAGAAGCGGAGAGAG+AGG | 0.541099 | 1_2:+14051874 | Msa0057850:CDS |
| TGAGGCACATTCAAACCAGC+AGG | 0.543084 | 1_2:+14048905 | Msa0057850:CDS |
| ATCGGTATACTCCAACTGAA+TGG | 0.545584 | 1_2:-14049092 | None:intergenic |
| AAATTTCAGGCTGTTAGGAT+TGG | 0.549112 | 1_2:+14051435 | Msa0057850:intron |
| TAACAGTAGATTTCTAGCTC+CGG | 0.549344 | 1_2:-14048251 | None:intergenic |
| GCACCCTCTTTCAGTTGCAC+CGG | 0.553574 | 1_2:+14048686 | Msa0057850:intron |
| ATATCAAAGGCTATCCGTGA+TGG | 0.556289 | 1_2:+14051669 | Msa0057850:CDS |
| AGGACTATCTTTGTCCAGAA+AGG | 0.556719 | 1_2:+14049232 | Msa0057850:CDS |
| TGCTGAAAGCATTATATCAA+AGG | 0.557966 | 1_2:+14051656 | Msa0057850:CDS |
| AAACCCACGTTTCACAAAGA+TGG | 0.558815 | 1_2:-14052050 | None:intergenic |
| CCTGATCATATAGGTTGTAG+TGG | 0.563760 | 1_2:-14048851 | None:intergenic |
| GGCAGAGAAGTTGAGGTCGA+AGG | 0.564667 | 1_2:+14048872 | Msa0057850:CDS |
| AATACCATCTTTGTGAAACG+TGG | 0.565186 | 1_2:+14052046 | Msa0057850:three_prime_UTR |
| AGAAAGAAATTGCTGAGAAG+CGG | 0.566547 | 1_2:+14051865 | Msa0057850:CDS |
| GCTCCCTCATGTTTATCGTG+TGG | 0.569954 | 1_2:+14052012 | Msa0057850:three_prime_UTR |
| TGGGGCAATTGATGCGACAT+TGG | 0.576856 | 1_2:+14051689 | Msa0057850:CDS |
| GTCGAAGGCTCCACGATTTG+AGG | 0.579551 | 1_2:+14048887 | Msa0057850:CDS |
| ATGATCAGGCAGAGAAGTTG+AGG | 0.580498 | 1_2:+14048865 | Msa0057850:CDS |
| GCAACAACAAGAGCAAGAGC+TGG | 0.580630 | 1_2:+14051896 | Msa0057850:CDS |
| CAACCTGACCAAGCTCATCA+TGG | 0.583223 | 1_2:-14048723 | None:intergenic |
| ACCTTGCGCCATGATGAGCT+TGG | 0.585868 | 1_2:+14048715 | Msa0057850:CDS |
| CCGATGTAGCTCAGAAGTTG+AGG | 0.586467 | 1_2:+14051607 | Msa0057850:CDS |
| AATGCTTTCAGCATCAGCAA+TGG | 0.590057 | 1_2:-14051646 | None:intergenic |
| TGGTGATCATGAGATGGAAG+TGG | 0.590531 | 1_2:+14048181 | Msa0057850:exon |
| TTGTCTTAACATGCACAATG+AGG | 0.598440 | 1_2:+14051803 | Msa0057850:CDS |
| CATGGCGCAAGGTAGCAATC+CGG | 0.599609 | 1_2:-14048705 | None:intergenic |
| TATCTTTGTCCAGAAAGGAA+TGG | 0.604027 | 1_2:+14049237 | Msa0057850:CDS |
| AGAGCTGGCAAAGCATATTG+AGG | 0.605558 | 1_2:+14051911 | Msa0057850:CDS |
| ATAGGATGGTGATCATGAGA+TGG | 0.608295 | 1_2:+14048175 | Msa0057850:exon |
| GCTACTACTTTCAGTACAGA+CGG | 0.609313 | 1_2:+14051495 | Msa0057850:CDS |
| ATACCATCTTTGTGAAACGT+GGG | 0.609563 | 1_2:+14052047 | Msa0057850:three_prime_UTR |
| GAGATCTTGCTGAAATTCGA+GGG | 0.610331 | 1_2:+14048523 | Msa0057850:CDS |
| CATTGGATCATGCTAATGGA+TGG | 0.611762 | 1_2:+14051706 | Msa0057850:CDS |
| ACCAAGCTCATCATGGCGCA+AGG | 0.611785 | 1_2:-14048716 | None:intergenic |
| TCGCATCAATTGCCCCATCA+CGG | 0.615331 | 1_2:-14051683 | None:intergenic |
| CCTCAACTTCTGAGCTACAT+CGG | 0.618788 | 1_2:-14051607 | None:intergenic |
| AAAGCACCAGTTGCAGCACA+GGG | 0.621042 | 1_2:+14049145 | Msa0057850:CDS |
| GCTGGCAAAGCATATTGAGG+AGG | 0.622117 | 1_2:+14051914 | Msa0057850:CDS |
| TTGAAAAGCTGCAGATGTTG+CGG | 0.622363 | 1_2:-14048207 | None:intergenic |
| GGATCATGCTAATGGATGGA+TGG | 0.627982 | 1_2:+14051710 | Msa0057850:CDS |
| AATCCGGTGCAACTGAAAGA+GGG | 0.632325 | 1_2:-14048689 | None:intergenic |
| TTCTCCACACGATAAACATG+AGG | 0.640327 | 1_2:-14052016 | None:intergenic |
| GAGCCGATCAATGCTAGCTG+AGG | 0.644380 | 1_2:-14048421 | None:intergenic |
| TTTGAATGTGCCTCAAATCG+TGG | 0.646040 | 1_2:-14048897 | None:intergenic |
| TAATGGATGGATGGTGTCCA+AGG | 0.648234 | 1_2:+14051719 | Msa0057850:CDS |
| ATCAAAGGCTATCCGTGATG+GGG | 0.650446 | 1_2:+14051671 | Msa0057850:CDS |
| GATCATATAGGTTGTAGTGG+AGG | 0.650992 | 1_2:-14048848 | None:intergenic |
| CTAGAATTAAAGGCCAACTG+AGG | 0.674246 | 1_2:-14051771 | None:intergenic |
| TGATCAGAAACGATACAATG+AGG | 0.681879 | 1_2:+14048298 | Msa0057850:CDS |
| TCTCCACACGATAAACATGA+GGG | 0.704536 | 1_2:-14052015 | None:intergenic |
| ATGGAAGTACTTAATCATTG+CGG | 0.709943 | 1_2:+14052157 | Msa0057850:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAGAGTAATTAATTTA+GGG | + | chr1_2:14050449-14050468 | Msa0057850:intron | 10.0% |
| !!! | TTGCTTTAATTTTTCAATTT+AGG | + | chr1_2:14048386-14048405 | Msa0057850:intron | 15.0% |
| !!! | TCTATATTTTAGTTTTCATT+TGG | + | chr1_2:14048955-14048974 | Msa0057850:intron | 15.0% |
| !!! | TAAAAGTGAACTTATTTTAT+TGG | + | chr1_2:14049341-14049360 | Msa0057850:intron | 15.0% |
| !!! | AACTTTAAGACATATAAATT+AGG | - | chr1_2:14049455-14049474 | None:intergenic | 15.0% |
| !! | AATTAGAAAGAAATTTAATC+TGG | + | chr1_2:14049893-14049912 | Msa0057850:intron | 15.0% |
| !! | GAATTAAAAAAATTAAGTGT+TGG | + | chr1_2:14049999-14050018 | Msa0057850:intron | 15.0% |
| !! | ATTTACTTAATTAATTAGAC+TGG | + | chr1_2:14050172-14050191 | Msa0057850:intron | 15.0% |
| !! | AATATTAAAAGAAAGTAAGT+TGG | + | chr1_2:14050423-14050442 | Msa0057850:intron | 15.0% |
| !! | GAATAAAGAGTAATTAATTT+AGG | + | chr1_2:14050448-14050467 | Msa0057850:intron | 15.0% |
| !! | ATATTTATGAGGATATAAAT+TGG | - | chr1_2:14051040-14051059 | None:intergenic | 15.0% |
| !! | TATTACAGAATTTAAACAAA+AGG | - | chr1_2:14051265-14051284 | None:intergenic | 15.0% |
| !! | AAGACAGAAATAATATATTA+TGG | - | chr1_2:14051383-14051402 | None:intergenic | 15.0% |
| !! | AATAAATAGTGAATATTTCA+GGG | - | chr1_2:14052094-14052113 | None:intergenic | 15.0% |
| !! | AAATAAATAGTGAATATTTC+AGG | - | chr1_2:14052095-14052114 | None:intergenic | 15.0% |
| !! | CTGAAAATAAAGATGTTATT+TGG | - | chr1_2:14048667-14048686 | None:intergenic | 20.0% |
| !!! | CATTTGGTTTAATTAATTGT+TGG | + | chr1_2:14048971-14048990 | Msa0057850:intron | 20.0% |
| !!! | ATTATAGTTCGTTTACTTTT+GGG | + | chr1_2:14049196-14049215 | Msa0057850:CDS | 20.0% |
| !!! | TTTACATTTTCATCTATACT+TGG | + | chr1_2:14049300-14049319 | Msa0057850:intron | 20.0% |
| !! | TATATCAAAATAAGAAGCTA+CGG | - | chr1_2:14049387-14049406 | None:intergenic | 20.0% |
| !! | ATACACCTTATTCTAAATAT+TGG | + | chr1_2:14049855-14049874 | Msa0057850:intron | 20.0% |
| !!! | ATCAACCAATATTTAGAATA+AGG | - | chr1_2:14049863-14049882 | None:intergenic | 20.0% |
| !!! | CTGCATTTCTTTTATATAAA+TGG | + | chr1_2:14050094-14050113 | Msa0057850:intron | 20.0% |
| !! | CTGATGAAAAATAAATAGAA+TGG | - | chr1_2:14050149-14050168 | None:intergenic | 20.0% |
| !! | TTCTCTCTCATAATAATTAA+GGG | - | chr1_2:14050405-14050424 | None:intergenic | 20.0% |
| !! | ATTCTCTCTCATAATAATTA+AGG | - | chr1_2:14050406-14050425 | None:intergenic | 20.0% |
| !!! | TAATTAATTTAGGGTATTCA+TGG | + | chr1_2:14050458-14050477 | Msa0057850:intron | 20.0% |
| !!! | CTATTTTCAATGTATTTTCT+TGG | + | chr1_2:14050519-14050538 | Msa0057850:intron | 20.0% |
| !! | TGTATACACATATATTTATG+AGG | - | chr1_2:14051051-14051070 | None:intergenic | 20.0% |
| !! | GAAAATTGAATGAAAAATAG+TGG | - | chr1_2:14051333-14051352 | None:intergenic | 20.0% |
| !! | AAAAACTTTCATGTTAGATT+TGG | - | chr1_2:14051355-14051374 | None:intergenic | 20.0% |
| !! | TTCACTAATTATATATTGCT+AGG | + | chr1_2:14052229-14052248 | Msa0057850:three_prime_UTR | 20.0% |
| !! | TCACTAATTATATATTGCTA+GGG | + | chr1_2:14052230-14052249 | Msa0057850:three_prime_UTR | 20.0% |
| !! | TCAAATAATCAATAAAAACG+AGG | - | chr1_2:14052285-14052304 | None:intergenic | 20.0% |
| !!! | CGTTTTTATTGATTATTTGA+CGG | + | chr1_2:14052285-14052304 | Msa0057850:three_prime_UTR | 20.0% |
| !!! | TTTAGAACGAATGAAAATAA+CGG | - | chr1_2:14052324-14052343 | None:intergenic | 20.0% |
| !!! | AAGCTTTGTTCTTTTCTATT+GGG | + | chr1_2:14048149-14048168 | Msa0057850:five_prime_UTR | 25.0% |
| ! | ATATAATCAATCATCATCAG+AGG | - | chr1_2:14048359-14048378 | None:intergenic | 25.0% |
| ! | TTTAAAAATGAATTCAGAGC+TGG | + | chr1_2:14048569-14048588 | Msa0057850:intron | 25.0% |
| ! | CAAAAGTAAACGAACTATAA+TGG | - | chr1_2:14049197-14049216 | None:intergenic | 25.0% |
| !! | CATTATAGTTCGTTTACTTT+TGG | + | chr1_2:14049195-14049214 | Msa0057850:CDS | 25.0% |
| ! | ACATTAGTAAGTTCAAAGTA+AGG | - | chr1_2:14049277-14049296 | None:intergenic | 25.0% |
| !!! | AAATAAGTTCACTTTTACTC+TGG | - | chr1_2:14049338-14049357 | None:intergenic | 25.0% |
| ! | TACAGTAAAAATTAAGGCTT+TGG | - | chr1_2:14049646-14049665 | None:intergenic | 25.0% |
| !! | AGCCTTAATTTTTACTGTAT+TGG | + | chr1_2:14049647-14049666 | Msa0057850:intron | 25.0% |
| !!! | TGCTATTTATGTCAAAGTTT+TGG | - | chr1_2:14049702-14049721 | None:intergenic | 25.0% |
| ! | AATAAGGTGTATGTTTCAAT+TGG | - | chr1_2:14049847-14049866 | None:intergenic | 25.0% |
| ! | GAAAGATAAGGATAAAAAAG+TGG | - | chr1_2:14050054-14050073 | None:intergenic | 25.0% |
| ! | TATGAAAAGATGCACAAAAT+AGG | - | chr1_2:14050227-14050246 | None:intergenic | 25.0% |
| !!! | TTGTTTCTAATAAAAAGCAC+CGG | - | chr1_2:14050300-14050319 | None:intergenic | 25.0% |
| ! | TGGTCAATCTTCTTATAAAA+AGG | - | chr1_2:14050346-14050365 | None:intergenic | 25.0% |
| !! | ATTAAAAGAAAGTAAGTTGG+TGG | + | chr1_2:14050426-14050445 | Msa0057850:intron | 25.0% |
| !!! | GTCTTTTGTTTCTTGTATAA+AGG | + | chr1_2:14050556-14050575 | Msa0057850:intron | 25.0% |
| ! | AACTTTGAATTGAGAAAATG+TGG | + | chr1_2:14050846-14050865 | Msa0057850:intron | 25.0% |
| ! | CATCATTTCTTACACAAATA+AGG | + | chr1_2:14050904-14050923 | Msa0057850:intron | 25.0% |
| ! | AAATGACATAGAACTTAAGT+GGG | - | chr1_2:14050955-14050974 | None:intergenic | 25.0% |
| ! | AAAATGACATAGAACTTAAG+TGG | - | chr1_2:14050956-14050975 | None:intergenic | 25.0% |
| !!! | AACTCAATTTTTTTAGAACC+TGG | + | chr1_2:14050998-14051017 | Msa0057850:intron | 25.0% |
| !!! | ACTCAATTTTTTTAGAACCT+GGG | + | chr1_2:14050999-14051018 | Msa0057850:intron | 25.0% |
| !!! | TATATTGTGGCTTTTAGTTT+TGG | + | chr1_2:14051104-14051123 | Msa0057850:intron | 25.0% |
| ! | TTTAGTTAAACACAATGTCA+CGG | + | chr1_2:14051154-14051173 | Msa0057850:intron | 25.0% |
| ! | AACAAAAGGATAATTGTTTC+AGG | - | chr1_2:14051251-14051270 | None:intergenic | 25.0% |
| ! | TGTATATGTTGTGAAATTTC+AGG | + | chr1_2:14051422-14051441 | Msa0057850:intron | 25.0% |
| !!! | TTCTCTTTATGTGTGTTTTT+TGG | - | chr1_2:14051849-14051868 | None:intergenic | 25.0% |
| !!! | CTATTTATTTTGAACCATTG+TGG | + | chr1_2:14052105-14052124 | Msa0057850:three_prime_UTR | 25.0% |
| !! | AGTAAATTCTTTTTCCACAA+TGG | - | chr1_2:14052122-14052141 | None:intergenic | 25.0% |
| !! | TTAAGTACTTCCATTGTTTT+TGG | - | chr1_2:14052151-14052170 | None:intergenic | 25.0% |
| ! | AGTCATCTTATCAACAAAAA+AGG | - | chr1_2:14052200-14052219 | None:intergenic | 25.0% |
| !! | TTTATTGATTATTTGACGGT+AGG | + | chr1_2:14052289-14052308 | Msa0057850:three_prime_UTR | 25.0% |
| ! | TTAGAACGAATGAAAATAAC+GGG | - | chr1_2:14052323-14052342 | None:intergenic | 25.0% |
| !!! | CAAGCTTTGTTCTTTTCTAT+TGG | + | chr1_2:14048148-14048167 | Msa0057850:five_prime_UTR | 30.0% |
| ! | TTCTTTTCTATTGGGTGTAT+AGG | + | chr1_2:14048157-14048176 | Msa0057850:five_prime_UTR | 30.0% |
| TGATGATTGATTATATGCTG+AGG | + | chr1_2:14048363-14048382 | Msa0057850:intron | 30.0% | |
| !!! | GGTGCTATTTATAAAGGTTT+TGG | + | chr1_2:14048763-14048782 | Msa0057850:intron | 30.0% |
| !!! | TTTTGGAACATATACTTACC+TGG | + | chr1_2:14048780-14048799 | Msa0057850:intron | 30.0% |
| TTCGAATTCAGTGTAACAAA+TGG | + | chr1_2:14049170-14049189 | Msa0057850:CDS | 30.0% | |
| TCGAATTCAGTGTAACAAAT+GGG | + | chr1_2:14049171-14049190 | Msa0057850:CDS | 30.0% | |
| ! | GACGAAATAAAGAGTACATA+GGG | - | chr1_2:14049597-14049616 | None:intergenic | 30.0% |
| ! | AGACGAAATAAAGAGTACAT+AGG | - | chr1_2:14049598-14049617 | None:intergenic | 30.0% |
| GGCCAATACAGTAAAAATTA+AGG | - | chr1_2:14049652-14049671 | None:intergenic | 30.0% | |
| AACATCTGTGAATGATTTCT+TGG | - | chr1_2:14049673-14049692 | None:intergenic | 30.0% | |
| AATTGTGAACCAAGAAGTTT+AGG | + | chr1_2:14049723-14049742 | Msa0057850:intron | 30.0% | |
| TAGACAGATTTCATTGAAAG+AGG | + | chr1_2:14049755-14049774 | Msa0057850:intron | 30.0% | |
| CAAAGGAACTATTGAGTTTA+GGG | - | chr1_2:14049799-14049818 | None:intergenic | 30.0% | |
| ACAAAGGAACTATTGAGTTT+AGG | - | chr1_2:14049800-14049819 | None:intergenic | 30.0% | |
| TCAATAGTTCCTTTGTCATT+TGG | + | chr1_2:14049804-14049823 | Msa0057850:intron | 30.0% | |
| TTGTTAAAGCGTGAAAGATA+AGG | - | chr1_2:14050066-14050085 | None:intergenic | 30.0% | |
| ! | TTGTTTCTTGTATAAAGGAC+CGG | + | chr1_2:14050561-14050580 | Msa0057850:intron | 30.0% |
| TGAATTACTCTCTAAATTGC+AGG | + | chr1_2:14050610-14050629 | Msa0057850:intron | 30.0% | |
| ! | GAAATTTGAAGCTAAATGAC+AGG | + | chr1_2:14050881-14050900 | Msa0057850:intron | 30.0% |
| AAAAGCCACAATATACTACA+GGG | - | chr1_2:14051099-14051118 | None:intergenic | 30.0% | |
| TAAAAGCCACAATATACTAC+AGG | - | chr1_2:14051100-14051119 | None:intergenic | 30.0% | |
| CAATCGAACGATCAAATTAT+TGG | - | chr1_2:14051523-14051542 | None:intergenic | 30.0% | |
| !! | TGCTGAAAGCATTATATCAA+AGG | + | chr1_2:14051656-14051675 | Msa0057850:CDS | 30.0% |
| GTAAATATCTCCAATTTCCT+TGG | - | chr1_2:14051739-14051758 | None:intergenic | 30.0% | |
| AAAGGCAATCCTAGAATTAA+AGG | - | chr1_2:14051784-14051803 | None:intergenic | 30.0% | |
| ATTGTGCATGTTAAGACAAA+AGG | - | chr1_2:14051802-14051821 | None:intergenic | 30.0% | |
| GTTTCACAAAGATGGTATTA+AGG | - | chr1_2:14052045-14052064 | None:intergenic | 30.0% | |
| TACTCATTAGCCAAAAACAA+TGG | + | chr1_2:14052138-14052157 | Msa0057850:three_prime_UTR | 30.0% | |
| !! | ATGGAAGTACTTAATCATTG+CGG | + | chr1_2:14052157-14052176 | Msa0057850:three_prime_UTR | 30.0% |
| TTTCTATTGGGTGTATAGGA+TGG | + | chr1_2:14048161-14048180 | Msa0057850:five_prime_UTR | 35.0% | |
| !! | TAACAGTAGATTTCTAGCTC+CGG | - | chr1_2:14048254-14048273 | None:intergenic | 35.0% |
| TGATCAGAAACGATACAATG+AGG | + | chr1_2:14048298-14048317 | Msa0057850:CDS | 35.0% | |
| ACGATACAATGAGGTTAGAA+TGG | + | chr1_2:14048307-14048326 | Msa0057850:intron | 35.0% | |
| TCATATAGCTATGAGCTTAC+TGG | + | chr1_2:14048501-14048520 | Msa0057850:CDS | 35.0% | |
| !! | CTTGGTGGTGCTATTTATAA+AGG | + | chr1_2:14048757-14048776 | Msa0057850:intron | 35.0% |
| TGTAGACATGTCAAGAAAAG+AGG | - | chr1_2:14049015-14049034 | None:intergenic | 35.0% | |
| TATCTTTGTCCAGAAAGGAA+TGG | + | chr1_2:14049237-14049256 | Msa0057850:CDS | 35.0% | |
| !!! | CACCCTCCTTTTTTTTTTAC+CGG | + | chr1_2:14049551-14049570 | Msa0057850:intron | 35.0% |
| CACCGGTAAAAAAAAAAGGA+GGG | - | chr1_2:14049556-14049575 | None:intergenic | 35.0% | |
| !! | AAGGCACCGGTAAAAAAAAA+AGG | - | chr1_2:14049560-14049579 | None:intergenic | 35.0% |
| ! | GAAATAAAGAGTACATAGGG+TGG | - | chr1_2:14049594-14049613 | None:intergenic | 35.0% |
| TTTCATTGAAAGAGGTAGTG+TGG | + | chr1_2:14049763-14049782 | Msa0057850:intron | 35.0% | |
| TTCAGAATAAGCTGAACCTA+TGG | + | chr1_2:14049941-14049960 | Msa0057850:intron | 35.0% | |
| TCAGAATAAGCTGAACCTAT+GGG | + | chr1_2:14049942-14049961 | Msa0057850:intron | 35.0% | |
| ! | CTAGAACATTTAGTTCCCAT+AGG | - | chr1_2:14049960-14049979 | None:intergenic | 35.0% |
| ATGTTCTAGTCAGTCAATTC+TGG | + | chr1_2:14049971-14049990 | Msa0057850:intron | 35.0% | |
| TCATTCTACTGAATGAAGTG+AGG | + | chr1_2:14050201-14050220 | Msa0057850:intron | 35.0% | |
| !! | TTCTAATAAAAAGCACCGGA+GGG | - | chr1_2:14050296-14050315 | None:intergenic | 35.0% |
| !! | TTTCTAATAAAAAGCACCGG+AGG | - | chr1_2:14050297-14050316 | None:intergenic | 35.0% |
| CTTCAAGCATACTTGAAACT+TGG | - | chr1_2:14050366-14050385 | None:intergenic | 35.0% | |
| ATTACTCTCTAAATTGCAGG+TGG | + | chr1_2:14050613-14050632 | Msa0057850:intron | 35.0% | |
| ! | AAAATTTGATGACTGCAGTG+AGG | - | chr1_2:14050790-14050809 | None:intergenic | 35.0% |
| ATTTCTGTCTTGCTTCTTTG+TGG | + | chr1_2:14051392-14051411 | Msa0057850:intron | 35.0% | |
| TTGTGAAATTTCAGGCTGTT+AGG | + | chr1_2:14051430-14051449 | Msa0057850:intron | 35.0% | |
| AAATTTCAGGCTGTTAGGAT+TGG | + | chr1_2:14051435-14051454 | Msa0057850:intron | 35.0% | |
| ! | TTGGTGATTTAGAGCTCTTT+AGG | + | chr1_2:14051454-14051473 | Msa0057850:CDS | 35.0% |
| TTGTCTTAACATGCACAATG+AGG | + | chr1_2:14051803-14051822 | Msa0057850:CDS | 35.0% | |
| AGAAAGAAATTGCTGAGAAG+CGG | + | chr1_2:14051865-14051884 | Msa0057850:CDS | 35.0% | |
| TTATCTTACCAATTGCTGTC+AGG | + | chr1_2:14051977-14051996 | Msa0057850:three_prime_UTR | 35.0% | |
| AATACCATCTTTGTGAAACG+TGG | + | chr1_2:14052046-14052065 | Msa0057850:three_prime_UTR | 35.0% | |
| ATACCATCTTTGTGAAACGT+GGG | + | chr1_2:14052047-14052066 | Msa0057850:three_prime_UTR | 35.0% | |
| ATAGGATGGTGATCATGAGA+TGG | + | chr1_2:14048175-14048194 | Msa0057850:exon | 40.0% | |
| TTGAAAAGCTGCAGATGTTG+CGG | - | chr1_2:14048210-14048229 | None:intergenic | 40.0% | |
| ! | CAATCAGAAAAAGAAGCACG+AGG | - | chr1_2:14048280-14048299 | None:intergenic | 40.0% |
| GAGATCTTGCTGAAATTCGA+GGG | + | chr1_2:14048523-14048542 | Msa0057850:CDS | 40.0% | |
| GATCATATAGGTTGTAGTGG+AGG | - | chr1_2:14048851-14048870 | None:intergenic | 40.0% | |
| CCTGATCATATAGGTTGTAG+TGG | - | chr1_2:14048854-14048873 | None:intergenic | 40.0% | |
| CCACTACAACCTATATGATC+AGG | + | chr1_2:14048851-14048870 | Msa0057850:CDS | 40.0% | |
| ACTTCTCTGCCTGATCATAT+AGG | - | chr1_2:14048863-14048882 | None:intergenic | 40.0% | |
| TTTGAATGTGCCTCAAATCG+TGG | - | chr1_2:14048900-14048919 | None:intergenic | 40.0% | |
| GATCAACACAATATACCTGC+TGG | - | chr1_2:14048923-14048942 | None:intergenic | 40.0% | |
| TCTTCTACCTCGGGAAAATT+CGG | + | chr1_2:14049068-14049087 | Msa0057850:CDS | 40.0% | |
| GAAAATTCGGACCATTCAGT+TGG | + | chr1_2:14049081-14049100 | Msa0057850:CDS | 40.0% | |
| ATCGGTATACTCCAACTGAA+TGG | - | chr1_2:14049095-14049114 | None:intergenic | 40.0% | |
| !! | TTTTGGGAGAAATTCCTGAG+AGG | + | chr1_2:14049212-14049231 | Msa0057850:CDS | 40.0% |
| AGGACTATCTTTGTCCAGAA+AGG | + | chr1_2:14049232-14049251 | Msa0057850:CDS | 40.0% | |
| AAGCTTTCTCCATTCCTTTC+TGG | - | chr1_2:14049249-14049268 | None:intergenic | 40.0% | |
| AAGGAATGGAGAAAGCTTTG+AGG | + | chr1_2:14049251-14049270 | Msa0057850:CDS | 40.0% | |
| GGTGTATGTGTCGAAAAGTT+TGG | - | chr1_2:14049535-14049554 | None:intergenic | 40.0% | |
| ! | GCACCGGTAAAAAAAAAAGG+AGG | - | chr1_2:14049557-14049576 | None:intergenic | 40.0% |
| TAGGGTGGAATAATGTAGCA+AGG | - | chr1_2:14049579-14049598 | None:intergenic | 40.0% | |
| AATGCAGCACCTAAACTTCT+TGG | - | chr1_2:14049735-14049754 | None:intergenic | 40.0% | |
| !! | ATTTGGCTTTGCCAGAATGT+AGG | + | chr1_2:14049821-14049840 | Msa0057850:intron | 40.0% |
| ! | GTTTCAATTGGCCTACATTC+TGG | - | chr1_2:14049835-14049854 | None:intergenic | 40.0% |
| CTGTTATGAAATACTCCCTC+CGG | + | chr1_2:14050278-14050297 | Msa0057850:intron | 40.0% | |
| TTTCTTGTATAAAGGACCGG+AGG | + | chr1_2:14050564-14050583 | Msa0057850:intron | 40.0% | |
| TTCTTGTATAAAGGACCGGA+GGG | + | chr1_2:14050565-14050584 | Msa0057850:intron | 40.0% | |
| TGTGTATATTCTACTCCCTC+CGG | - | chr1_2:14050583-14050602 | None:intergenic | 40.0% | |
| CTAGTCCCTGTAGTATATTG+TGG | + | chr1_2:14051091-14051110 | Msa0057850:intron | 40.0% | |
| GCTACTACTTTCAGTACAGA+CGG | + | chr1_2:14051495-14051514 | Msa0057850:CDS | 40.0% | |
| GATTGCGTCATAATGTCATC+AGG | + | chr1_2:14051538-14051557 | Msa0057850:CDS | 40.0% | |
| ATCATATTCTCGCATCTCAC+TGG | + | chr1_2:14051584-14051603 | Msa0057850:CDS | 40.0% | |
| ATGCTTTCAGCATCAGCAAT+GGG | - | chr1_2:14051648-14051667 | None:intergenic | 40.0% | |
| AATGCTTTCAGCATCAGCAA+TGG | - | chr1_2:14051649-14051668 | None:intergenic | 40.0% | |
| ATATCAAAGGCTATCCGTGA+TGG | + | chr1_2:14051669-14051688 | Msa0057850:CDS | 40.0% | |
| TATCAAAGGCTATCCGTGAT+GGG | + | chr1_2:14051670-14051689 | Msa0057850:CDS | 40.0% | |
| CATTGGATCATGCTAATGGA+TGG | + | chr1_2:14051706-14051725 | Msa0057850:CDS | 40.0% | |
| CTAGAATTAAAGGCCAACTG+AGG | - | chr1_2:14051774-14051793 | None:intergenic | 40.0% | |
| !! | CTCAGTTGGCCTTTAATTCT+AGG | + | chr1_2:14051772-14051791 | Msa0057850:CDS | 40.0% |
| GATAAACATGAGGGAGCAAA+TGG | - | chr1_2:14052009-14052028 | None:intergenic | 40.0% | |
| TCTCCACACGATAAACATGA+GGG | - | chr1_2:14052018-14052037 | None:intergenic | 40.0% | |
| TTCTCCACACGATAAACATG+AGG | - | chr1_2:14052019-14052038 | None:intergenic | 40.0% | |
| AAACCCACGTTTCACAAAGA+TGG | - | chr1_2:14052053-14052072 | None:intergenic | 40.0% | |
| ! | ACGTGGGTTTACCTTTTAGA+TGG | + | chr1_2:14052063-14052082 | Msa0057850:three_prime_UTR | 40.0% |
| TCAGGGATCTTCCATCTAAA+AGG | - | chr1_2:14052077-14052096 | None:intergenic | 40.0% | |
| GGCGTAATATGTTGTTCTGT+CGG | + | chr1_2:14052251-14052270 | Msa0057850:three_prime_UTR | 40.0% | |
| TGGTGATCATGAGATGGAAG+TGG | + | chr1_2:14048181-14048200 | Msa0057850:exon | 45.0% | |
| !! | GTTCCTCAGCTAGCATTGAT+CGG | + | chr1_2:14048418-14048437 | Msa0057850:CDS | 45.0% |
| GGAGATCTTGCTGAAATTCG+AGG | + | chr1_2:14048522-14048541 | Msa0057850:CDS | 45.0% | |
| CTGAAATTCGAGGGTGAGTT+GGG | + | chr1_2:14048532-14048551 | Msa0057850:intron | 45.0% | |
| AATCCGGTGCAACTGAAAGA+GGG | - | chr1_2:14048692-14048711 | None:intergenic | 45.0% | |
| ATGATCAGGCAGAGAAGTTG+AGG | + | chr1_2:14048865-14048884 | Msa0057850:CDS | 45.0% | |
| TGTCGCTATCTCTTCTACCT+CGG | + | chr1_2:14049058-14049077 | Msa0057850:CDS | 45.0% | |
| ! | CAGGAGAGACTCTTTTGCAT+CGG | - | chr1_2:14049113-14049132 | None:intergenic | 45.0% |
| TGGACAAAGATAGTCCTCTC+AGG | - | chr1_2:14049229-14049248 | None:intergenic | 45.0% | |
| TCGATCACATGACTCATGAC+TGG | + | chr1_2:14049499-14049518 | Msa0057850:intron | 45.0% | |
| GTCGAAAAGTTTGGCTACAC+CGG | - | chr1_2:14049526-14049545 | None:intergenic | 45.0% | |
| GGAATAATGTAGCAAGGCAC+CGG | - | chr1_2:14049573-14049592 | None:intergenic | 45.0% | |
| CTGGCAAAGCCAAATGACAA+AGG | - | chr1_2:14049816-14049835 | None:intergenic | 45.0% | |
| TGTTGGATAATAGCCCCAAC+TGG | + | chr1_2:14050016-14050035 | Msa0057850:intron | 45.0% | |
| GATCACAAAACGACCAGTTG+GGG | - | chr1_2:14050032-14050051 | None:intergenic | 45.0% | |
| GGATCACAAAACGACCAGTT+GGG | - | chr1_2:14050033-14050052 | None:intergenic | 45.0% | |
| TGGATCACAAAACGACCAGT+TGG | - | chr1_2:14050034-14050053 | None:intergenic | 45.0% | |
| AACTTCCAAATCCTACCCTC+AGG | - | chr1_2:14051206-14051225 | None:intergenic | 45.0% | |
| AGGGTAGGATTTGGAAGTTG+TGG | + | chr1_2:14051207-14051226 | Msa0057850:intron | 45.0% | |
| CGTCATAATGTCATCAGGAC+TGG | + | chr1_2:14051543-14051562 | Msa0057850:CDS | 45.0% | |
| CCTCAACTTCTGAGCTACAT+CGG | - | chr1_2:14051610-14051629 | None:intergenic | 45.0% | |
| ATCAAAGGCTATCCGTGATG+GGG | + | chr1_2:14051671-14051690 | Msa0057850:CDS | 45.0% | |
| GCGACATTGGATCATGCTAA+TGG | + | chr1_2:14051702-14051721 | Msa0057850:CDS | 45.0% | |
| ! | GGATCATGCTAATGGATGGA+TGG | + | chr1_2:14051710-14051729 | Msa0057850:CDS | 45.0% |
| ! | TAATGGATGGATGGTGTCCA+AGG | + | chr1_2:14051719-14051738 | Msa0057850:CDS | 45.0% |
| TGGATGGTGTCCAAGGAAAT+TGG | + | chr1_2:14051726-14051745 | Msa0057850:CDS | 45.0% | |
| CTCTACAAATGAGCCTCAGT+TGG | + | chr1_2:14051758-14051777 | Msa0057850:CDS | 45.0% | |
| AGAGCTGGCAAAGCATATTG+AGG | + | chr1_2:14051911-14051930 | Msa0057850:CDS | 45.0% | |
| GCTAGCTGAGGAACAAGCTT+TGG | - | chr1_2:14048412-14048431 | None:intergenic | 50.0% | |
| GCTGAAATTCGAGGGTGAGT+TGG | + | chr1_2:14048531-14048550 | Msa0057850:intron | 50.0% | |
| CAATCCGGTGCAACTGAAAG+AGG | - | chr1_2:14048693-14048712 | None:intergenic | 50.0% | |
| CAACCTGACCAAGCTCATCA+TGG | - | chr1_2:14048726-14048745 | None:intergenic | 50.0% | |
| CATGATGAGCTTGGTCAGGT+TGG | + | chr1_2:14048724-14048743 | Msa0057850:intron | 50.0% | |
| !! | CAGGTTGGTGTTGACTTGCT+TGG | + | chr1_2:14048739-14048758 | Msa0057850:intron | 50.0% |
| !! | GTTGGTGTTGACTTGCTTGG+TGG | + | chr1_2:14048742-14048761 | Msa0057850:intron | 50.0% |
| ! | CTTACCTGGTGATGTCATGC+AGG | + | chr1_2:14048794-14048813 | Msa0057850:intron | 50.0% |
| GTTTCCTGCATGACATCACC+AGG | - | chr1_2:14048801-14048820 | None:intergenic | 50.0% | |
| TGAGGCACATTCAAACCAGC+AGG | + | chr1_2:14048905-14048924 | Msa0057850:CDS | 50.0% | |
| GTCGCTATCTCTTCTACCTC+GGG | + | chr1_2:14049059-14049078 | Msa0057850:CDS | 50.0% | |
| ! | GAATGGTCCGAATTTTCCCG+AGG | - | chr1_2:14049078-14049097 | None:intergenic | 50.0% |
| TGCAAAAGAGTCTCTCCTGC+AGG | + | chr1_2:14049114-14049133 | Msa0057850:CDS | 50.0% | |
| ! | TAAAGCACCAGTTGCAGCAC+AGG | + | chr1_2:14049144-14049163 | Msa0057850:CDS | 50.0% |
| ! | AAAGCACCAGTTGCAGCACA+GGG | + | chr1_2:14049145-14049164 | Msa0057850:CDS | 50.0% |
| ! | CACATGACTCATGACTGGTC+CGG | + | chr1_2:14049504-14049523 | Msa0057850:intron | 50.0% |
| GGCTGCATAAATAGAGTCCC+AGG | - | chr1_2:14051019-14051038 | None:intergenic | 50.0% | |
| ACACTTTCTACCTTGCCTGC+AGG | + | chr1_2:14051068-14051087 | Msa0057850:intron | 50.0% | |
| TCAGGTGCATCTCAACAGCA+TGG | - | chr1_2:14051188-14051207 | None:intergenic | 50.0% | |
| ATGCTGTTGAGATGCACCTG+AGG | + | chr1_2:14051187-14051206 | Msa0057850:intron | 50.0% | |
| TGCTGTTGAGATGCACCTGA+GGG | + | chr1_2:14051188-14051207 | Msa0057850:intron | 50.0% | |
| ATGCACCTGAGGGTAGGATT+TGG | + | chr1_2:14051198-14051217 | Msa0057850:intron | 50.0% | |
| CCGATGTAGCTCAGAAGTTG+AGG | + | chr1_2:14051607-14051626 | Msa0057850:CDS | 50.0% | |
| TCGCATCAATTGCCCCATCA+CGG | - | chr1_2:14051686-14051705 | None:intergenic | 50.0% | |
| TGGGGCAATTGATGCGACAT+TGG | + | chr1_2:14051689-14051708 | Msa0057850:CDS | 50.0% | |
| GCAACAACAAGAGCAAGAGC+TGG | + | chr1_2:14051896-14051915 | Msa0057850:CDS | 50.0% | |
| GCTGGCAAAGCATATTGAGG+AGG | + | chr1_2:14051914-14051933 | Msa0057850:CDS | 50.0% | |
| GGAGAGATCCTGACAGCAAT+TGG | - | chr1_2:14051988-14052007 | None:intergenic | 50.0% | |
| GCTCCCTCATGTTTATCGTG+TGG | + | chr1_2:14052012-14052031 | Msa0057850:three_prime_UTR | 50.0% | |
| ! | TCCAGCCAAGCACTTGTTGC+CGG | + | chr1_2:14048232-14048251 | Msa0057850:CDS | 55.0% |
| TAGCTCCGGCAACAAGTGCT+TGG | - | chr1_2:14048240-14048259 | None:intergenic | 55.0% | |
| GAGCCGATCAATGCTAGCTG+AGG | - | chr1_2:14048424-14048443 | None:intergenic | 55.0% | |
| GCACCCTCTTTCAGTTGCAC+CGG | + | chr1_2:14048686-14048705 | Msa0057850:intron | 55.0% | |
| CATGGCGCAAGGTAGCAATC+CGG | - | chr1_2:14048708-14048727 | None:intergenic | 55.0% | |
| ACCTTGCGCCATGATGAGCT+TGG | + | chr1_2:14048715-14048734 | Msa0057850:CDS | 55.0% | |
| ACCAAGCTCATCATGGCGCA+AGG | - | chr1_2:14048719-14048738 | None:intergenic | 55.0% | |
| GGCAGAGAAGTTGAGGTCGA+AGG | + | chr1_2:14048872-14048891 | Msa0057850:CDS | 55.0% | |
| GTCGAAGGCTCCACGATTTG+AGG | + | chr1_2:14048887-14048906 | Msa0057850:CDS | 55.0% | |
| CGAAAACCCTGTGCTGCAAC+TGG | - | chr1_2:14049154-14049173 | None:intergenic | 55.0% | |
| !! | TACTACAGGGACTAGCCTGC+AGG | - | chr1_2:14051086-14051105 | None:intergenic | 55.0% |
| GTTGAGATGCACCTGAGGGT+AGG | + | chr1_2:14051192-14051211 | Msa0057850:intron | 55.0% | |
| TTGCTGAGAAGCGGAGAGAG+AGG | + | chr1_2:14051874-14051893 | Msa0057850:CDS | 55.0% | |
| TCCGGCAACAAGTGCTTGGC+TGG | - | chr1_2:14048236-14048255 | None:intergenic | 60.0% | |
| GCGCCATGATGAGCTTGGTC+AGG | + | chr1_2:14048720-14048739 | Msa0057850:CDS | 60.0% | |
| GTGCTTTACGAGCAGCCTGC+AGG | - | chr1_2:14049132-14049151 | None:intergenic | 60.0% | |
| !! | CAGGGACTAGCCTGCAGGCA+AGG | - | chr1_2:14051081-14051100 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 14048119 | 14052372 | 14048119 | ID=Msa0057850;Name=Msa0057850 |
| chr1_2 | mRNA | 14048119 | 14052372 | 14048119 | ID=Msa0057850-mRNA-1;Parent=Msa0057850;Name=Msa0057850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=75|1|1|1|1|1|6|413|394 |
| chr1_2 | exon | 14048119 | 14048319 | 14048119 | ID=Msa0057850-mRNA-1:exon:5569;Parent=Msa0057850-mRNA-1 |
| chr1_2 | exon | 14048408 | 14048544 | 14048408 | ID=Msa0057850-mRNA-1:exon:5570;Parent=Msa0057850-mRNA-1 |
| chr1_2 | exon | 14048687 | 14048741 | 14048687 | ID=Msa0057850-mRNA-1:exon:5571;Parent=Msa0057850-mRNA-1 |
| chr1_2 | exon | 14048816 | 14048926 | 14048816 | ID=Msa0057850-mRNA-1:exon:5572;Parent=Msa0057850-mRNA-1 |
| chr1_2 | exon | 14049055 | 14049294 | 14049055 | ID=Msa0057850-mRNA-1:exon:5573;Parent=Msa0057850-mRNA-1 |
| chr1_2 | exon | 14051444 | 14052372 | 14051444 | ID=Msa0057850-mRNA-1:exon:5574;Parent=Msa0057850-mRNA-1 |
| chr1_2 | five_prime_UTR | 14048119 | 14048193 | 14048119 | ID=Msa0057850-mRNA-1:five_prime_utr;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14048194 | 14048319 | 14048194 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14048408 | 14048544 | 14048408 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14048687 | 14048741 | 14048687 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14048816 | 14048926 | 14048816 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14049055 | 14049294 | 14049055 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | CDS | 14051444 | 14051959 | 14051444 | ID=Msa0057850-mRNA-1:cds;Parent=Msa0057850-mRNA-1 |
| chr1_2 | three_prime_UTR | 14051960 | 14052372 | 14051960 | ID=Msa0057850-mRNA-1:three_prime_utr;Parent=Msa0057850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
