Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423050 | sp|P42896|ENO_RICCO | 90.023 | 441 | 44 | 0 | 4 | 444 | 5 | 445 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423050 | A0A072U338 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1423050 | 0.809092 | 2.245158e-50 | -8.615850e-47 |
| Msa0003330 | Msa1423050 | 0.837602 | 4.718704e-57 | -8.615850e-47 |
| Msa0021290 | Msa1423050 | 0.806382 | 8.450793e-50 | -8.615850e-47 |
| Msa0027590 | Msa1423050 | 0.804115 | 2.521540e-49 | -8.615850e-47 |
| Msa0042510 | Msa1423050 | 0.812287 | 4.574524e-51 | -8.615850e-47 |
| Msa0050320 | Msa1423050 | -0.814073 | 1.855177e-51 | -8.615850e-47 |
| Msa0057850 | Msa1423050 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa0071640 | Msa1423050 | 0.806154 | 9.438902e-50 | -8.615850e-47 |
| Msa0072570 | Msa1423050 | 0.811457 | 6.935484e-51 | -8.615850e-47 |
| Msa0089540 | Msa1423050 | 0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0094210 | Msa1423050 | 0.813372 | 2.645950e-51 | -8.615850e-47 |
| Msa0099090 | Msa1423050 | -0.803273 | 3.771721e-49 | -8.615850e-47 |
| Msa0113920 | Msa1423050 | 0.831384 | 1.721217e-55 | -8.615850e-47 |
| Msa0116600 | Msa1423050 | 0.808306 | 3.305111e-50 | -8.615850e-47 |
| Msa1347610 | Msa1423050 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa1359880 | Msa1423050 | -0.811720 | 6.077900e-51 | -8.615850e-47 |
| Msa1363910 | Msa1423050 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa1387750 | Msa1423050 | 0.822424 | 2.386444e-53 | -8.615850e-47 |
| Msa1390760 | Msa1423050 | 0.834608 | 2.716324e-56 | -8.615850e-47 |
| Msa1403520 | Msa1423050 | 0.810655 | 1.034964e-50 | -8.615850e-47 |
| Msa1423050 | Msa1450560 | 0.863606 | 2.208168e-64 | -8.615850e-47 |
| Msa1423050 | Msa1463510 | 0.836616 | 8.431814e-57 | -8.615850e-47 |
| Msa1423050 | Msa1465700 | 0.829782 | 4.245860e-55 | -8.615850e-47 |
| Msa1423050 | Msa1465890 | 0.822534 | 2.250553e-53 | -8.615850e-47 |
| Msa0602900 | Msa1423050 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0604890 | Msa1423050 | -0.810788 | 9.683270e-51 | -8.615850e-47 |
| Msa0619230 | Msa1423050 | 0.832759 | 7.868431e-56 | -8.615850e-47 |
| Msa0621190 | Msa1423050 | 0.843885 | 1.063828e-58 | -8.615850e-47 |
| Msa0643960 | Msa1423050 | 0.806841 | 6.762778e-50 | -8.615850e-47 |
| Msa0646180 | Msa1423050 | -0.813089 | 3.053769e-51 | -8.615850e-47 |
| Msa0655970 | Msa1423050 | 0.841655 | 4.166060e-58 | -8.615850e-47 |
| Msa0656320 | Msa1423050 | 0.837255 | 5.789601e-57 | -8.615850e-47 |
| Msa0709380 | Msa1423050 | 0.946874 | 2.002637e-105 | -8.615850e-47 |
| Msa0758420 | Msa1423050 | 0.826233 | 3.035956e-54 | -8.615850e-47 |
| Msa0790450 | Msa1423050 | 0.858923 | 5.901019e-63 | -8.615850e-47 |
| Msa0132890 | Msa1423050 | 0.822126 | 2.799140e-53 | -8.615850e-47 |
| Msa0154720 | Msa1423050 | -0.811099 | 8.291492e-51 | -8.615850e-47 |
| Msa0188740 | Msa1423050 | 0.868904 | 4.614025e-66 | -8.615850e-47 |
| Msa0192050 | Msa1423050 | 0.829817 | 4.162728e-55 | -8.615850e-47 |
| Msa0192300 | Msa1423050 | 0.848499 | 5.896676e-60 | -8.615850e-47 |
| Msa0195030 | Msa1423050 | 0.860208 | 2.424624e-63 | -8.615850e-47 |
| Msa0197920 | Msa1423050 | 0.804210 | 2.409659e-49 | -8.615850e-47 |
| Msa0216640 | Msa1423050 | 0.817066 | 3.997531e-52 | -8.615850e-47 |
| Msa0233550 | Msa1423050 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0237180 | Msa1423050 | 0.841171 | 5.585487e-58 | -8.615850e-47 |
| Msa1225040 | Msa1423050 | 0.801711 | 7.914765e-49 | -8.615850e-47 |
| Msa1235980 | Msa1423050 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa1237040 | Msa1423050 | 0.857929 | 1.167409e-62 | -8.615850e-47 |
| Msa1299220 | Msa1423050 | 0.808108 | 3.641813e-50 | -8.615850e-47 |
| Msa1307730 | Msa1423050 | 0.834555 | 2.800761e-56 | -8.615850e-47 |
| Msa1316100 | Msa1423050 | 0.803847 | 2.867051e-49 | -8.615850e-47 |
| Msa1317390 | Msa1423050 | 0.856994 | 2.207932e-62 | -8.615850e-47 |
| Msa0371490 | Msa1423050 | 0.820584 | 6.349461e-53 | -8.615850e-47 |
| Msa0373550 | Msa1423050 | 0.863943 | 1.734342e-64 | -8.615850e-47 |
| Msa0380590 | Msa1423050 | 0.813866 | 2.060356e-51 | -8.615850e-47 |
| Msa0382670 | Msa1423050 | 0.866923 | 1.998312e-65 | -8.615850e-47 |
| Msa0385030 | Msa1423050 | 0.822068 | 2.887326e-53 | -8.615850e-47 |
| Msa0387290 | Msa1423050 | 0.840107 | 1.061133e-57 | -8.615850e-47 |
| Msa0389800 | Msa1423050 | 0.832150 | 1.114144e-55 | -8.615850e-47 |
| Msa0416470 | Msa1423050 | 0.843473 | 1.370991e-58 | -8.615850e-47 |
| Msa0426090 | Msa1423050 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0432260 | Msa1423050 | -0.818988 | 1.470169e-52 | -8.615850e-47 |
| Msa0434370 | Msa1423050 | 0.806047 | 9.941506e-50 | -8.615850e-47 |
| Msa0436830 | Msa1423050 | -0.840130 | 1.046777e-57 | -8.615850e-47 |
| Msa0468140 | Msa1423050 | 0.835287 | 1.832105e-56 | -8.615850e-47 |
| Msa0468660 | Msa1423050 | 0.859351 | 4.391289e-63 | -8.615850e-47 |
| Msa0472480 | Msa1423050 | 0.813221 | 2.856104e-51 | -8.615850e-47 |
| Msa0479480 | Msa1423050 | 0.805237 | 1.470826e-49 | -8.615850e-47 |
| Msa0480940 | Msa1423050 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0982260 | Msa1423050 | 0.832074 | 1.163121e-55 | -8.615850e-47 |
| Msa1037030 | Msa1423050 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa1041830 | Msa1423050 | 0.977339 | 1.392538e-143 | -8.615850e-47 |
| Msa1046140 | Msa1423050 | 0.818403 | 1.996591e-52 | -8.615850e-47 |
| Msa1076200 | Msa1423050 | 0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0239420 | Msa1423050 | 0.830011 | 3.733451e-55 | -8.615850e-47 |
| Msa0243750 | Msa1423050 | 0.809109 | 2.225718e-50 | -8.615850e-47 |
| Msa0270160 | Msa1423050 | 0.828529 | 8.547906e-55 | -8.615850e-47 |
| Msa0274940 | Msa1423050 | 0.853722 | 1.980723e-61 | -8.615850e-47 |
| Msa0282290 | Msa1423050 | 0.808452 | 3.076277e-50 | -8.615850e-47 |
| Msa0301250 | Msa1423050 | 0.846904 | 1.619870e-59 | -8.615850e-47 |
| Msa0313060 | Msa1423050 | 0.831277 | 1.828807e-55 | -8.615850e-47 |
| Msa0315660 | Msa1423050 | 0.851670 | 7.629532e-61 | -8.615850e-47 |
| Msa0317300 | Msa1423050 | 0.819666 | 1.030331e-52 | -8.615850e-47 |
| Msa0341860 | Msa1423050 | -0.800807 | 1.211763e-48 | -8.615850e-47 |
| Msa1124980 | Msa1423050 | 0.994155 | 5.382471e-205 | -8.615850e-47 |
| Msa1126690 | Msa1423050 | 0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa1152860 | Msa1423050 | 0.851165 | 1.060019e-60 | -8.615850e-47 |
| Msa1163320 | Msa1423050 | 0.811107 | 8.261332e-51 | -8.615850e-47 |
| Msa1167360 | Msa1423050 | 0.997470 | 4.206957e-243 | -8.615850e-47 |
| Msa1207880 | Msa1423050 | 0.802222 | 6.213832e-49 | -8.615850e-47 |
| Msa1218610 | Msa1423050 | 0.818535 | 1.863445e-52 | -8.615850e-47 |
| Msa0482760 | Msa1423050 | 0.831710 | 1.430493e-55 | -8.615850e-47 |
| Msa0500420 | Msa1423050 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0511760 | Msa1423050 | 0.812157 | 4.882620e-51 | -8.615850e-47 |
| Msa0514540 | Msa1423050 | 0.810301 | 1.234104e-50 | -8.615850e-47 |
| Msa0540160 | Msa1423050 | -0.800403 | 1.465388e-48 | -8.615850e-47 |
| Msa0547920 | Msa1423050 | 0.806979 | 6.321640e-50 | -8.615850e-47 |
| Msa0573550 | Msa1423050 | 0.823281 | 1.507542e-53 | -8.615850e-47 |
| Msa0582070 | Msa1423050 | 0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0597240 | Msa1423050 | 0.822786 | 1.966479e-53 | -8.615850e-47 |
| Msa0852620 | Msa1423050 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0880050 | Msa1423050 | 0.999722 | 0.000000e+00 | -8.615850e-47 |
| Msa0881240 | Msa1423050 | 0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0929700 | Msa1423050 | 0.822947 | 1.803585e-53 | -8.615850e-47 |
| Msa0929790 | Msa1423050 | 0.814718 | 1.336080e-51 | -8.615850e-47 |
| Msa0930360 | Msa1423050 | 0.844452 | 7.494593e-59 | -8.615850e-47 |
| Msa0930790 | Msa1423050 | 0.846856 | 1.669459e-59 | -8.615850e-47 |
| Msa0935930 | Msa1423050 | -0.801944 | 7.090323e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423050 | MtrunA17_Chr7g0265741 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa1423050 | MtrunA17_Chr6g0476311 | 87.640 | 445 | 54 | 1 | 1 | 444 | 2 | 446 | 0.0 | 816 |
| Msa1423050 | MtrunA17_Chr2g0307671 | 68.182 | 440 | 128 | 7 | 2 | 440 | 63 | 491 | 0.0 | 602 |
| Msa1423050 | MtrunA17_Chr5g0447301 | 60.268 | 224 | 81 | 4 | 2 | 224 | 45 | 261 | 1.07e-84 | 261 |
| Msa1423050 | MtrunA17_Chr5g0447311 | 59.155 | 213 | 84 | 3 | 226 | 438 | 19 | 228 | 8.35e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423050 | AT2G36530.1 | 89.189 | 444 | 48 | 0 | 1 | 444 | 1 | 444 | 0.0 | 821 |
| Msa1423050 | AT2G36530.2 | 89.336 | 422 | 45 | 0 | 23 | 444 | 12 | 433 | 0.0 | 780 |
| Msa1423050 | AT1G74030.1 | 67.352 | 438 | 131 | 6 | 4 | 440 | 51 | 477 | 0.0 | 599 |
| Msa1423050 | AT2G29560.1 | 57.763 | 438 | 174 | 7 | 2 | 438 | 45 | 472 | 1.83e-175 | 500 |
Find 165 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATATGCAGGAGTTTA+TGG | 0.174723 | tig0025511:-16538 | Msa1423050:intron |
| TAATTAGACGTCATAAAATT+TGG | 0.221935 | tig0025511:-13872 | Msa1423050:three_prime_UTR |
| AAACAACAGGTCAACCAAAT+TGG | 0.247163 | tig0025511:-14869 | Msa1423050:intron |
| GTTACTACTCAACTGAAAAT+TGG | 0.253970 | tig0025511:+14021 | None:intergenic |
| TCTCAGTCACGGATCCAATT+TGG | 0.266564 | tig0025511:+14855 | None:intergenic |
| AAATATGTGGTTGGGTGTTT+AGG | 0.286685 | tig0025511:-13653 | Msa1423050:three_prime_UTR |
| ATAAAATTTGGTCATGCATT+AGG | 0.291097 | tig0025511:-13860 | Msa1423050:three_prime_UTR |
| CCCGCTTTCAATGTGATTAA+TGG | 0.296494 | tig0025511:-16667 | Msa1423050:CDS |
| TGCAAGAGACACTGCTAATA+TGG | 0.297215 | tig0025511:+17141 | None:intergenic |
| GGGTCTCAGACACCTGCTTA+TGG | 0.300267 | tig0025511:+18910 | None:intergenic |
| CACTTTCAAAGCTTCTAGTA+TGG | 0.308227 | tig0025511:+14281 | None:intergenic |
| TCAATTTCTGTCTGCTGAGT+TGG | 0.308960 | tig0025511:+17334 | None:intergenic |
| CCTTGTATAGAGGAATCTTT+AGG | 0.321207 | tig0025511:+17095 | None:intergenic |
| GGATCCTCAATTGAAACAAT+TGG | 0.323273 | tig0025511:+15225 | None:intergenic |
| GACTTCCACACCCATCTTCA+TGG | 0.331030 | tig0025511:+16482 | None:intergenic |
| TTAGTTTGAGCAATGAGATT+TGG | 0.336977 | tig0025511:-14238 | Msa1423050:three_prime_UTR |
| TACGATAAACAAATTAGATT+TGG | 0.337185 | tig0025511:-13606 | Msa1423050:three_prime_UTR |
| ACTTTACTCCACCGGTTGCT+TGG | 0.345294 | tig0025511:-13909 | Msa1423050:three_prime_UTR |
| TAATGTTCTTAGGTTGTCAT+TGG | 0.357703 | tig0025511:-15933 | Msa1423050:intron |
| CTTTACTCCACCGGTTGCTT+GGG | 0.361693 | tig0025511:-13908 | Msa1423050:three_prime_UTR |
| TCAGGAAAACAAGGAAGGTT+TGG | 0.362760 | tig0025511:-16086 | Msa1423050:CDS |
| GTCAGCCCCATAAAATAAAA+AGG | 0.371324 | tig0025511:+14124 | None:intergenic |
| CAATTTCTGTCTGCTGAGTT+GGG | 0.375682 | tig0025511:+17335 | None:intergenic |
| CAAAACCAAGTTCTTGTTAC+CGG | 0.376652 | tig0025511:+16696 | None:intergenic |
| AAAGATCTGACGGGCCTTGA+TGG | 0.379603 | tig0025511:+18790 | None:intergenic |
| AGCTTCTAGTATGGCTCGAC+AGG | 0.381624 | tig0025511:+14290 | None:intergenic |
| TTAAGACCGGAGCACCTTGC+AGG | 0.385327 | tig0025511:-14499 | Msa1423050:CDS |
| TGTTGGAGCCTCCTCTTTCA+AGG | 0.388440 | tig0025511:-16508 | Msa1423050:CDS |
| GACAGAAATTGACAACTTCA+TGG | 0.389489 | tig0025511:-17323 | Msa1423050:CDS |
| TCAAACTAAGGTTGGTTATC+CGG | 0.395194 | tig0025511:+14252 | None:intergenic |
| GACGGCTCACAGAAGATATC+TGG | 0.395388 | tig0025511:-15291 | Msa1423050:CDS |
| ACCTGAGGCTCGGTGGTAGA+TGG | 0.398239 | tig0025511:+13829 | None:intergenic |
| ATCATACGATTTGAACTTCA+AGG | 0.407971 | tig0025511:-15871 | Msa1423050:CDS |
| GCTAAGATGACCGGTGAGAT+TGG | 0.409902 | tig0025511:-15174 | Msa1423050:CDS |
| AGCCGTCAGGATGTCCAAAA+AGG | 0.410162 | tig0025511:-14825 | Msa1423050:CDS |
| GGTCTCAGACACCTGCTTAT+GGG | 0.420775 | tig0025511:+18911 | None:intergenic |
| CAGCATATTGCAAACATTGC+CGG | 0.421071 | tig0025511:-16715 | Msa1423050:CDS |
| TTCATTGCTGATCTTGCTGT+TGG | 0.424087 | tig0025511:-14635 | Msa1423050:CDS |
| TGACGGAACTGTTAATGAAT+GGG | 0.427486 | tig0025511:-17290 | Msa1423050:CDS |
| GCAACCGGTGGAGTAAAGTT+TGG | 0.427490 | tig0025511:+13913 | None:intergenic |
| CTCTGACCTGCAAGGTGCTC+CGG | 0.431664 | tig0025511:+14493 | None:intergenic |
| CATTGCCGGTAACAAGAACT+TGG | 0.438486 | tig0025511:-16701 | Msa1423050:CDS |
| GGTGCTGAAGCAGTGTATGC+TGG | 0.440630 | tig0025511:-14329 | Msa1423050:CDS |
| GTACCCAATTGTTTCAATTG+AGG | 0.440774 | tig0025511:-15229 | Msa1423050:CDS |
| AAATCTCATTGCTCAAACTA+AGG | 0.442849 | tig0025511:+14240 | None:intergenic |
| CTCATTGCTCAAACTAAGGT+TGG | 0.443078 | tig0025511:+14244 | None:intergenic |
| AACACTAACCTGGTTGTACT+TGG | 0.444307 | tig0025511:+14463 | None:intergenic |
| ATCACATTGAAAGCGGGAAC+AGG | 0.450874 | tig0025511:+16673 | None:intergenic |
| TCTCTTGCAGTGTGCAAAGC+TGG | 0.451916 | tig0025511:-17127 | Msa1423050:CDS |
| ACCATCTACCACCGAGCCTC+AGG | 0.453494 | tig0025511:-13830 | Msa1423050:three_prime_UTR |
| GATCCTCAATTGAAACAATT+GGG | 0.460561 | tig0025511:+15226 | None:intergenic |
| ACTCCACCGGTTGCTTGGGT+TGG | 0.461300 | tig0025511:-13904 | Msa1423050:three_prime_UTR |
| GAGTTTATGGTTCTTCCTGT+TGG | 0.470295 | tig0025511:-16525 | Msa1423050:CDS |
| TTGAAAGAGGAGGCTCCAAC+AGG | 0.471503 | tig0025511:+16510 | None:intergenic |
| CTTCATGGCTTCCTTGAAAG+AGG | 0.475418 | tig0025511:+16497 | None:intergenic |
| TCACATCGATTTCTTCTCCA+TGG | 0.477736 | tig0025511:-18825 | Msa1423050:exon |
| TCCCAGTCATCCTGGTCAAA+AGG | 0.478242 | tig0025511:+15204 | None:intergenic |
| GATGGAGGATCTGACTATCT+TGG | 0.478515 | tig0025511:-18171 | Msa1423050:CDS |
| AGGAAACAAACTTGCAATGC+AGG | 0.487451 | tig0025511:-16632 | Msa1423050:intron |
| TTGACGGAACTGTTAATGAA+TGG | 0.488553 | tig0025511:-17291 | Msa1423050:CDS |
| GTTCCTAGTGGTGCATCCAC+TGG | 0.489788 | tig0025511:-18578 | Msa1423050:intron |
| TTCATGGTTCAGAAGCTTGA+CGG | 0.490896 | tig0025511:-17307 | Msa1423050:CDS |
| CATAGTGCTCCCAGTCATCC+TGG | 0.492578 | tig0025511:+15196 | None:intergenic |
| ACCGTATAAAATATGTGGTT+GGG | 0.493409 | tig0025511:-13661 | Msa1423050:three_prime_UTR |
| GGAACCAATGTACAAATTGT+TGG | 0.493520 | tig0025511:-15153 | Msa1423050:CDS |
| CACCGTATAAAATATGTGGT+TGG | 0.494907 | tig0025511:-13662 | Msa1423050:three_prime_UTR |
| AATTGTTGGTGATGATCTCT+TGG | 0.498883 | tig0025511:-15139 | Msa1423050:CDS |
| GCTGTGATTAAGAAGAAATA+TGG | 0.499581 | tig0025511:-16157 | Msa1423050:CDS |
| ATCACCAACAATTTGTACAT+TGG | 0.504433 | tig0025511:+15149 | None:intergenic |
| AACAGCAAGATCAGCAATGA+AGG | 0.504723 | tig0025511:+14637 | None:intergenic |
| ATATAGCCAACCCAAGCAAC+CGG | 0.504740 | tig0025511:+13898 | None:intergenic |
| GGGGCTGACAAGTTATCCCC+TGG | 0.506892 | tig0025511:-14110 | Msa1423050:three_prime_UTR |
| CTGAGAGTATTGAAGCCGTC+AGG | 0.511646 | tig0025511:-14838 | Msa1423050:CDS |
| AAGTTCAAACCTTCTGTGGC+TGG | 0.511692 | tig0025511:+14784 | None:intergenic |
| CATACCTTGCCGATCAATGC+TGG | 0.514212 | tig0025511:+17536 | None:intergenic |
| TTGAGAATTGAGGAGGAGCT+TGG | 0.514397 | tig0025511:-14350 | Msa1423050:CDS |
| GCAGTAAATGTTGGTGATGA+AGG | 0.515363 | tig0025511:-16127 | Msa1423050:CDS |
| TTCTTAGGTTGTCATTGGAA+TGG | 0.517609 | tig0025511:-15928 | Msa1423050:intron |
| GATCAATGCTGGTGCAATGA+TGG | 0.520209 | tig0025511:+17547 | None:intergenic |
| ACTATAAATAACCCATAAGC+AGG | 0.523830 | tig0025511:-18922 | Msa1423050:five_prime_UTR |
| TTTCAAGGAAGCCATGAAGA+TGG | 0.524759 | tig0025511:-16493 | Msa1423050:CDS |
| TACATTGGTTCCAATCTCAC+CGG | 0.526389 | tig0025511:+15164 | None:intergenic |
| TTGGCAGCTATTGAGAATTG+AGG | 0.528228 | tig0025511:-14360 | Msa1423050:intron |
| AAAAGAAGCGAGAGTTGATA+GGG | 0.529115 | tig0025511:-18945 | Msa1423050:five_prime_UTR |
| GGATAAATTACCTTGTATAG+AGG | 0.532813 | tig0025511:+17085 | None:intergenic |
| CAACTTAATCAATCGTGAAG+AGG | 0.534326 | tig0025511:+13762 | None:intergenic |
| CCTAAAGATTCCTCTATACA+AGG | 0.534980 | tig0025511:-17095 | Msa1423050:intron |
| AGCGAAAGTACCATCGGATA+CGG | 0.536390 | tig0025511:+18610 | None:intergenic |
| AAGTCCGCCATTGACAAAGC+TGG | 0.537931 | tig0025511:-16055 | Msa1423050:CDS |
| TGCAGCTTCTGAGTTCTACA+AGG | 0.538609 | tig0025511:-15901 | Msa1423050:CDS |
| ATTGGAACGACATTGAAAGT+AGG | 0.539332 | tig0025511:+14039 | None:intergenic |
| GGTGTAACCAGCTTTGTCAA+TGG | 0.547964 | tig0025511:+16048 | None:intergenic |
| GCAACCAAACTTTACTCCAC+CGG | 0.548449 | tig0025511:-13917 | Msa1423050:three_prime_UTR |
| TTCAAGGAAGCCATGAAGAT+GGG | 0.550371 | tig0025511:-16492 | Msa1423050:CDS |
| ATCATTGCACCAGCATTGAT+CGG | 0.553718 | tig0025511:-17545 | Msa1423050:CDS |
| CCCCAACATTCAGGAAAACA+AGG | 0.562910 | tig0025511:-16095 | Msa1423050:CDS |
| GAGGCTCTTGAGTTAAGAGA+TGG | 0.564582 | tig0025511:-18189 | Msa1423050:CDS |
| GGCTGCTATTACCTCCATCA+AGG | 0.566953 | tig0025511:-18804 | Msa1423050:CDS |
| GCTTTCAATGTGATTAATGG+TGG | 0.568679 | tig0025511:-16664 | Msa1423050:CDS |
| CATACTAGAAGCTTTGAAAG+TGG | 0.569484 | tig0025511:-14280 | Msa1423050:exon |
| GGAAGCCATGAAGATGGGTG+TGG | 0.573653 | tig0025511:-16487 | Msa1423050:CDS |
| TCTTGGCAAGGGTGTATCAA+AGG | 0.577692 | tig0025511:-18154 | Msa1423050:intron |
| CAGACACCGTATAAAATATG+TGG | 0.578912 | tig0025511:-13666 | Msa1423050:three_prime_UTR |
| AGTATGGCTCGACAGGGGTA+CGG | 0.579765 | tig0025511:+14297 | None:intergenic |
| GTGTCCACAGAGAGTTCAGA+AGG | 0.580306 | tig0025511:-15022 | Msa1423050:intron |
| TCTTGCTGTTGGTTTGTCAA+CGG | 0.581023 | tig0025511:-14624 | Msa1423050:intron |
| TAATATACAGACCTTGGGGT+TGG | 0.582575 | tig0025511:+15113 | None:intergenic |
| AGACACTGCTAATATGGCAT+TGG | 0.587574 | tig0025511:+17147 | None:intergenic |
| GATGGAGGTAATAGCAGCCA+TGG | 0.587616 | tig0025511:+18808 | None:intergenic |
| AACATTCAGGAAAACAAGGA+AGG | 0.590478 | tig0025511:-16091 | Msa1423050:CDS |
| CTGAAAAGAGAACTGTATTG+TGG | 0.590789 | tig0025511:-13705 | Msa1423050:three_prime_UTR |
| CATGGCTTCCTTGAAAGAGG+AGG | 0.591923 | tig0025511:+16500 | None:intergenic |
| CCATTAATCACATTGAAAGC+GGG | 0.594481 | tig0025511:+16667 | None:intergenic |
| ATTAATGGTGGATCACATGC+AGG | 0.595757 | tig0025511:-16652 | Msa1423050:CDS |
| GAACAGGGTCAAATTAAGAC+CGG | 0.596686 | tig0025511:-14512 | Msa1423050:intron |
| CGTCAGATCTTTGACAGTCG+TGG | 0.597878 | tig0025511:-18779 | Msa1423050:CDS |
| AGGATCTGACTATCTTGGCA+AGG | 0.598318 | tig0025511:-18166 | Msa1423050:CDS |
| TGAAGACGAACCTCGACGGT+AGG | 0.599041 | tig0025511:+18752 | None:intergenic |
| AAGCAATAAAACCTGAGGCT+CGG | 0.599744 | tig0025511:+13819 | None:intergenic |
| GTGTCATGACCAGCCACAGA+AGG | 0.602021 | tig0025511:-14793 | Msa1423050:intron |
| CACGACTGTCAAAGATCTGA+CGG | 0.602120 | tig0025511:+18780 | None:intergenic |
| GCAAGACGCTCTGACCTGCA+AGG | 0.602568 | tig0025511:+14485 | None:intergenic |
| GGATCTGACTATCTTGGCAA+GGG | 0.603603 | tig0025511:-18165 | Msa1423050:CDS |
| ACGACTGTCAAAGATCTGAC+GGG | 0.605306 | tig0025511:+18781 | None:intergenic |
| ATGGGGTTGGTGCAAACAAA+AGG | 0.606880 | tig0025511:-17272 | Msa1423050:intron |
| ACCATTAATCACATTGAAAG+CGG | 0.610449 | tig0025511:+16666 | None:intergenic |
| GCTTCTAGTATGGCTCGACA+GGG | 0.610899 | tig0025511:+14291 | None:intergenic |
| GACAAAGTTCAAACCTTCTG+TGG | 0.611804 | tig0025511:+14780 | None:intergenic |
| AGCTCTAGCGAAAGTACCAT+CGG | 0.612079 | tig0025511:+18604 | None:intergenic |
| GCTAGAGCTGCTGTTCCTAG+TGG | 0.613085 | tig0025511:-18590 | Msa1423050:CDS |
| GAGCACTATGCTAAGATGAC+CGG | 0.616214 | tig0025511:-15183 | Msa1423050:CDS |
| GATCTGACGGGCCTTGATGG+AGG | 0.617525 | tig0025511:+18793 | None:intergenic |
| TTTGTTGTATACGTAGCCAG+TGG | 0.625526 | tig0025511:+13941 | None:intergenic |
| ATTGACAAAGCTGGTTACAC+CGG | 0.627043 | tig0025511:-16046 | Msa1423050:CDS |
| ATACCAGTGGATGCACCACT+AGG | 0.628478 | tig0025511:+18575 | None:intergenic |
| GATGCAAACCGACCTTCAGA+TGG | 0.629057 | tig0025511:+16454 | None:intergenic |
| CAATAAAACCTGAGGCTCGG+TGG | 0.630433 | tig0025511:+13822 | None:intergenic |
| GCTCTTGAGTTAAGAGATGG+AGG | 0.631055 | tig0025511:-18186 | Msa1423050:CDS |
| TGTTTGCAGTGGAGAGACTG+AGG | 0.633750 | tig0025511:-14663 | Msa1423050:intron |
| CTAATTATTAGGTATTTACG+AGG | 0.636389 | tig0025511:-18208 | Msa1423050:intron |
| TTGTTGTATACGTAGCCAGT+GGG | 0.637900 | tig0025511:+13942 | None:intergenic |
| GGCTTCAATACTCTCAGTCA+CGG | 0.640921 | tig0025511:+14844 | None:intergenic |
| TGCACCAGCATTGATCGGCA+AGG | 0.641409 | tig0025511:-17540 | Msa1423050:intron |
| GCAGCTATTGAGAATTGAGG+AGG | 0.642636 | tig0025511:-14357 | Msa1423050:intron |
| GAAGTGAAGACGAACCTCGA+CGG | 0.646889 | tig0025511:+18748 | None:intergenic |
| TCAAAAGTATCACTACCCAC+TGG | 0.647418 | tig0025511:-13957 | Msa1423050:three_prime_UTR |
| GGTCAAGATGCAGTAAATGT+TGG | 0.647677 | tig0025511:-16136 | Msa1423050:CDS |
| GCGTCTTGCCAAGTACAACC+AGG | 0.651331 | tig0025511:-14471 | Msa1423050:intron |
| TAGCCAACCCAAGCAACCGG+TGG | 0.655770 | tig0025511:+13901 | None:intergenic |
| TGAGCAATGAGATTTGGCTG+CGG | 0.657198 | tig0025511:-14232 | Msa1423050:three_prime_UTR |
| GGAAGTCTATCACCATCTGA+AGG | 0.660829 | tig0025511:-16466 | Msa1423050:intron |
| TGCAATGATGGTGTTCACGT+TGG | 0.669626 | tig0025511:+17559 | None:intergenic |
| GTAACCAGCTTTGTCAATGG+CGG | 0.670465 | tig0025511:+16051 | None:intergenic |
| TCTCTTGGTTACCAACCCCA+AGG | 0.674267 | tig0025511:-15124 | Msa1423050:intron |
| GAACTGTTAATGAATGGGGT+TGG | 0.674740 | tig0025511:-17285 | Msa1423050:CDS |
| TTGTAAAGACAGATGCGTTG+TGG | 0.674792 | tig0025511:-13742 | Msa1423050:three_prime_UTR |
| GTTGATATAACCGTATCCGA+TGG | 0.679936 | tig0025511:-18620 | Msa1423050:CDS |
| AGTTCAAGCAATAAAACCTG+AGG | 0.680048 | tig0025511:+13814 | None:intergenic |
| CTCACAGAAGATATCTGGAG+AGG | 0.680128 | tig0025511:-15286 | Msa1423050:CDS |
| GACGGAACTGTTAATGAATG+GGG | 0.691515 | tig0025511:-17289 | Msa1423050:CDS |
| GTAAATGTTGGTGATGAAGG+TGG | 0.697402 | tig0025511:-16124 | Msa1423050:CDS |
| TCGTGGCAATCCTACCGTCG+AGG | 0.699567 | tig0025511:-18762 | Msa1423050:intron |
| AGCTTCTGAGTTCTACAAGG+AGG | 0.702282 | tig0025511:-15898 | Msa1423050:CDS |
| TTGACAATCCAGAACAACGA+CGG | 0.703661 | tig0025511:-15309 | Msa1423050:intron |
| CTTCTAGTATGGCTCGACAG+GGG | 0.721455 | tig0025511:+14292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCAAAAATAAAATTAAA+CGG | + | tig0025511:14297-14316 | None:intergenic | 10.0% |
| !!! | TATTTTTGAAACTAATTATT+AGG | - | tig0025511:14305-14324 | Msa1423050:CDS | 10.0% |
| !! | AGTTGTATATATAAATAAAA+TGG | + | tig0025511:17024-17043 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTCTTT+TGG | - | tig0025511:17435-17454 | Msa1423050:intron | 10.0% |
| !!! | TGAATTTTTTTTATTCTTTT+GGG | - | tig0025511:17436-17455 | Msa1423050:intron | 10.0% |
| !! | AATCTGATTATGATTATTAT+AGG | - | tig0025511:13882-13901 | Msa1423050:three_prime_UTR | 15.0% |
| !!! | TTTTTGTGTGTTAATTATTA+TGG | - | tig0025511:14028-14047 | Msa1423050:three_prime_UTR | 15.0% |
| !! | TTGAAAATCATCATAAATAA+CGG | + | tig0025511:14080-14099 | None:intergenic | 15.0% |
| !!! | TAATAACTTGATATATCTTT+TGG | + | tig0025511:14533-14552 | None:intergenic | 15.0% |
| !!! | TGTATTCATCTAATATTTTT+TGG | - | tig0025511:15565-15584 | Msa1423050:intron | 15.0% |
| !!! | ATCTAATATTTTTTGGTATT+CGG | - | tig0025511:15572-15591 | Msa1423050:intron | 15.0% |
| !! | ATAAAAAGGTCAAAATTTAT+TGG | + | tig0025511:18389-18408 | None:intergenic | 15.0% |
| !!! | ATTTTGACCTTTTTATTTTA+TGG | - | tig0025511:18393-18412 | Msa1423050:intron | 15.0% |
| !!! | TTTTGACCTTTTTATTTTAT+GGG | - | tig0025511:18394-18413 | Msa1423050:intron | 15.0% |
| !!! | TTTTCATCAATTCTATTTTG+TGG | - | tig0025511:13987-14006 | Msa1423050:three_prime_UTR | 20.0% |
| !! | GAAATCTACTTAAATATCTA+TGG | + | tig0025511:14216-14235 | None:intergenic | 20.0% |
| !! | TTAAGAAACAGAAAATATGA+TGG | + | tig0025511:14407-14426 | None:intergenic | 20.0% |
| !! | AAATAGAACGAAATGAAAAT+AGG | + | tig0025511:14604-14623 | None:intergenic | 20.0% |
| !!! | GTCTTTTATTTTGTCTTTTT+TGG | - | tig0025511:14624-14643 | Msa1423050:intron | 20.0% |
| !!! | TTTATTTTGTCTTTTTTGGA+AGG | - | tig0025511:14628-14647 | Msa1423050:CDS | 20.0% |
| !! | ATGATAAAAAAAACTGTCAT+CGG | + | tig0025511:15060-15079 | None:intergenic | 20.0% |
| !! | TCACTTAACTATACTATAAT+GGG | + | tig0025511:15086-15105 | None:intergenic | 20.0% |
| !! | TTCACTTAACTATACTATAA+TGG | + | tig0025511:15087-15106 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCATTACTAG+AGG | - | tig0025511:15125-15144 | Msa1423050:CDS | 20.0% |
| !!! | AAAATTTAGATAATGCCTTT+TGG | + | tig0025511:16115-16134 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTCATATTATTG+AGG | + | tig0025511:16144-16163 | None:intergenic | 20.0% |
| !!! | ACATTTTGTATAATGTTCTT+AGG | - | tig0025511:16581-16600 | Msa1423050:intron | 20.0% |
| !! | TATAAATAAAATGGCTAACA+AGG | + | tig0025511:17015-17034 | None:intergenic | 20.0% |
| !! | TATATATACAACTTGAAAGA+TGG | - | tig0025511:17031-17050 | Msa1423050:intron | 20.0% |
| !!! | TCAACATAAATGTTTTTTTG+AGG | + | tig0025511:17160-17179 | None:intergenic | 20.0% |
| !! | AAAAGGAAACGTTATTATAT+TGG | + | tig0025511:17977-17996 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTTTATTTTATG+GGG | - | tig0025511:18395-18414 | Msa1423050:intron | 20.0% |
| !! | TAATTAGACGTCATAAAATT+TGG | - | tig0025511:18652-18671 | Msa1423050:intron | 20.0% |
| !! | TACGATAAACAAATTAGATT+TGG | - | tig0025511:18918-18937 | Msa1423050:five_prime_UTR | 20.0% |
| ! | CTAATTATTAGGTATTTACG+AGG | - | tig0025511:14316-14335 | Msa1423050:CDS | 25.0% |
| !! | AAAGTATTTCTCCTAATGAA+GGG | + | tig0025511:14469-14488 | None:intergenic | 25.0% |
| !!! | AAAAGTATTTCTCCTAATGA+AGG | + | tig0025511:14470-14489 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTAGATTTCTTTT+TGG | - | tig0025511:14567-14586 | Msa1423050:intron | 25.0% |
| ! | TTTCCATTCCTTCATAAAAT+AGG | + | tig0025511:14672-14691 | None:intergenic | 25.0% |
| !! | TGGTAGTTTTCTAATCATAA+AGG | + | tig0025511:14700-14719 | None:intergenic | 25.0% |
| ! | TATGATTAGAAAACTACCAA+TGG | - | tig0025511:14701-14720 | Msa1423050:intron | 25.0% |
| ! | TTGAGAAAAGAAATGAATGA+AGG | + | tig0025511:14738-14757 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGAAATGAAACA+AGG | + | tig0025511:14789-14808 | None:intergenic | 25.0% |
| !! | TATTACATTAGTGTTTTCTC+TGG | - | tig0025511:15021-15040 | Msa1423050:intron | 25.0% |
| ! | CACTTAACTATACTATAATG+GGG | + | tig0025511:15085-15104 | None:intergenic | 25.0% |
| ! | AAAAAACAATCAGAACTAGA+AGG | + | tig0025511:15336-15355 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCTGATTGTTTTT+TGG | - | tig0025511:15335-15354 | Msa1423050:intron | 25.0% |
| !!! | TTCTGATTGTTTTTTGGTTT+TGG | - | tig0025511:15341-15360 | Msa1423050:intron | 25.0% |
| ! | TGGTACTTAACTGTATTTAA+AGG | - | tig0025511:15470-15489 | Msa1423050:intron | 25.0% |
| ! | AATGGACATAAAAGAAAACT+GGG | + | tig0025511:15727-15746 | None:intergenic | 25.0% |
| ! | AAATGGACATAAAAGAAAAC+TGG | + | tig0025511:15728-15747 | None:intergenic | 25.0% |
| ! | AAACGACTCAACTAAAAAAA+TGG | + | tig0025511:15745-15764 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCAGTAATAAG+CGG | - | tig0025511:16189-16208 | Msa1423050:intron | 25.0% |
| !! | CTCTATTCAATTTTCTGTTT+CGG | - | tig0025511:16519-16538 | Msa1423050:CDS | 25.0% |
| !! | AATTTTCTGTTTCGGTTATT+TGG | - | tig0025511:16527-16546 | Msa1423050:CDS | 25.0% |
| ! | TTCTCAGATTTATTCATTTG+AGG | - | tig0025511:16551-16570 | Msa1423050:intron | 25.0% |
| ! | TCTCAGATTTATTCATTTGA+GGG | - | tig0025511:16552-16571 | Msa1423050:intron | 25.0% |
| !!! | GTGAATAATTTTGAAGAGAA+GGG | + | tig0025511:16756-16775 | None:intergenic | 25.0% |
| !!! | AGTGAATAATTTTGAAGAGA+AGG | + | tig0025511:16757-16776 | None:intergenic | 25.0% |
| ! | TAATAACAATTCTGGTACTA+AGG | + | tig0025511:16879-16898 | None:intergenic | 25.0% |
| !! | AACAATAGAAACAGTTCTTT+TGG | - | tig0025511:16911-16930 | Msa1423050:intron | 25.0% |
| ! | ATTCTTAACCCTTCTTAAAA+AGG | + | tig0025511:16966-16985 | None:intergenic | 25.0% |
| ! | TCATATAATATACAGACCTT+GGG | + | tig0025511:17419-17438 | None:intergenic | 25.0% |
| ! | TTCATATAATATACAGACCT+TGG | + | tig0025511:17420-17439 | None:intergenic | 25.0% |
| ! | ATCAATACATTTATCTACCT+AGG | + | tig0025511:17613-17632 | None:intergenic | 25.0% |
| ! | CAACTGTAAGATATTTAACA+AGG | - | tig0025511:17802-17821 | Msa1423050:intron | 25.0% |
| !!! | TCATATATTTTTGTTTGCAG+TGG | - | tig0025511:17850-17869 | Msa1423050:intron | 25.0% |
| ! | AACGTTATTATATTGGACAT+GGG | + | tig0025511:17970-17989 | None:intergenic | 25.0% |
| ! | AAACGTTATTATATTGGACA+TGG | + | tig0025511:17971-17990 | None:intergenic | 25.0% |
| ! | TCAAGATACGATTAACAAAA+AGG | + | tig0025511:17994-18013 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACATTTGCTT+CGG | - | tig0025511:18082-18101 | Msa1423050:intron | 25.0% |
| ! | ATAAAATTTGGTCATGCATT+AGG | - | tig0025511:18664-18683 | Msa1423050:intron | 25.0% |
| ACTATAAATAACCCATAAGC+AGG | - | tig0025511:13602-13621 | Msa1423050:three_prime_UTR | 30.0% | |
| ! | AGATTTCGTAGATTTTACTC+TGG | - | tig0025511:14229-14248 | Msa1423050:three_prime_UTR | 30.0% |
| ! | CTCAACTACCTATTTTATGA+AGG | - | tig0025511:14661-14680 | Msa1423050:intron | 30.0% |
| ! | CTACCTATTTTATGAAGGAA+TGG | - | tig0025511:14666-14685 | Msa1423050:intron | 30.0% |
| AAAAAGAAATGAAACAAGGC+AGG | + | tig0025511:14785-14804 | None:intergenic | 30.0% | |
| !!! | GCCTTGTTTCATTTCTTTTT+TGG | - | tig0025511:14785-14804 | Msa1423050:intron | 30.0% |
| TACTGCATAAAAAAGTGAGA+TGG | - | tig0025511:14860-14879 | Msa1423050:CDS | 30.0% | |
| !!! | ATTCTCACCTGATTTTTTCT+TGG | - | tig0025511:14926-14945 | Msa1423050:intron | 30.0% |
| GGATAAATTACCTTGTATAG+AGG | + | tig0025511:15442-15461 | None:intergenic | 30.0% | |
| TATTTAAAGGCTCTGTTAGT+TGG | - | tig0025511:15483-15502 | Msa1423050:intron | 30.0% | |
| ATGGACATAAAAGAAAACTG+GGG | + | tig0025511:15726-15745 | None:intergenic | 30.0% | |
| ACCATTAATCACATTGAAAG+CGG | + | tig0025511:15861-15880 | None:intergenic | 30.0% | |
| TACTGGTAAAAAACAAAGCT+TGG | + | tig0025511:16184-16203 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGTAATAAGC+GGG | - | tig0025511:16190-16209 | Msa1423050:intron | 30.0% |
| GCTGTGATTAAGAAGAAATA+TGG | - | tig0025511:16367-16386 | Msa1423050:intron | 30.0% | |
| CGAAACAGAAAATTGAATAG+AGG | + | tig0025511:16521-16540 | None:intergenic | 30.0% | |
| ! | TAATGTTCTTAGGTTGTCAT+TGG | - | tig0025511:16591-16610 | Msa1423050:intron | 30.0% |
| ATCATACGATTTGAACTTCA+AGG | - | tig0025511:16653-16672 | Msa1423050:CDS | 30.0% | |
| AGGCTTTCTAATAACAATTC+TGG | + | tig0025511:16887-16906 | None:intergenic | 30.0% | |
| ! | AGAATTGTTATTAGAAAGCC+TGG | - | tig0025511:16886-16905 | Msa1423050:intron | 30.0% |
| ! | GAATTGTTATTAGAAAGCCT+GGG | - | tig0025511:16887-16906 | Msa1423050:intron | 30.0% |
| !! | ATATCCTCTCCTTTTTAAGA+AGG | - | tig0025511:16954-16973 | Msa1423050:intron | 30.0% |
| !! | TATCCTCTCCTTTTTAAGAA+GGG | - | tig0025511:16955-16974 | Msa1423050:intron | 30.0% |
| GATCCTCAATTGAAACAATT+GGG | + | tig0025511:17301-17320 | None:intergenic | 30.0% | |
| ATCACCAACAATTTGTACAT+TGG | + | tig0025511:17378-17397 | None:intergenic | 30.0% | |
| CATATAATATACAGACCTTG+GGG | + | tig0025511:17418-17437 | None:intergenic | 30.0% | |
| ! | CTTGACATATTTGAAACAAC+AGG | - | tig0025511:17642-17661 | Msa1423050:intron | 30.0% |
| ACAATTGTTGAACTGAGATA+AGG | + | tig0025511:17931-17950 | None:intergenic | 30.0% | |
| TTGTTAATCGTATCTTGAAC+AGG | - | tig0025511:17996-18015 | Msa1423050:intron | 30.0% | |
| TGTTAATCGTATCTTGAACA+GGG | - | tig0025511:17997-18016 | Msa1423050:intron | 30.0% | |
| AAATCTCATTGCTCAAACTA+AGG | + | tig0025511:18287-18306 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAGCAATGAGATT+TGG | - | tig0025511:18286-18305 | Msa1423050:intron | 30.0% |
| ! | ACACAACTTTAAAAATCCAG+GGG | + | tig0025511:18433-18452 | None:intergenic | 30.0% |
| ! | CACACAACTTTAAAAATCCA+GGG | + | tig0025511:18434-18453 | None:intergenic | 30.0% |
| GTTACTACTCAACTGAAAAT+TGG | + | tig0025511:18506-18525 | None:intergenic | 30.0% | |
| ! | TGAGTAGTAACGATTTTTGT+TGG | - | tig0025511:18515-18534 | Msa1423050:intron | 30.0% |
| ACCGTATAAAATATGTGGTT+GGG | - | tig0025511:18863-18882 | Msa1423050:five_prime_UTR | 30.0% | |
| ! | ACCCAACCACATATTTTATA+CGG | + | tig0025511:18867-18886 | None:intergenic | 30.0% |
| !! | AAAAGAAGCGAGAGTTGATA+GGG | - | tig0025511:13579-13598 | Msa1423050:three_prime_UTR | 35.0% |
| ATCGATGAGCGATAATAGAT+CGG | + | tig0025511:13829-13848 | None:intergenic | 35.0% | |
| !! | AGATTTTACTCTGGTACTGA+TGG | - | tig0025511:14238-14257 | Msa1423050:three_prime_UTR | 35.0% |
| TTCCAGTTATACCCTTCATT+AGG | - | tig0025511:14455-14474 | Msa1423050:intron | 35.0% | |
| ATCACAATGACCTCTAGTAA+TGG | + | tig0025511:15138-15157 | None:intergenic | 35.0% | |
| GACAGAAATTGACAACTTCA+TGG | - | tig0025511:15201-15220 | Msa1423050:CDS | 35.0% | |
| TTGACGGAACTGTTAATGAA+TGG | - | tig0025511:15233-15252 | Msa1423050:CDS | 35.0% | |
| TGACGGAACTGTTAATGAAT+GGG | - | tig0025511:15234-15253 | Msa1423050:CDS | 35.0% | |
| TGTGATAGATTACGATCTAC+AGG | + | tig0025511:15294-15313 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGTTTCAGCT+TGG | - | tig0025511:15352-15371 | Msa1423050:intron | 35.0% |
| CCTTGTATAGAGGAATCTTT+AGG | + | tig0025511:15432-15451 | None:intergenic | 35.0% | |
| CCTAAAGATTCCTCTATACA+AGG | - | tig0025511:15429-15448 | Msa1423050:intron | 35.0% | |
| GGTAATTTATCCATGAACTG+TGG | - | tig0025511:15450-15469 | Msa1423050:intron | 35.0% | |
| TCAACTTCAATTACACGACA+TGG | + | tig0025511:15511-15530 | None:intergenic | 35.0% | |
| TTCGGTACTTAAGAACAACA+TGG | - | tig0025511:15590-15609 | Msa1423050:intron | 35.0% | |
| CAAAACCAAGTTCTTGTTAC+CGG | + | tig0025511:15831-15850 | None:intergenic | 35.0% | |
| CCATTAATCACATTGAAAGC+GGG | + | tig0025511:15860-15879 | None:intergenic | 35.0% | |
| GCTTTCAATGTGATTAATGG+TGG | - | tig0025511:15860-15879 | Msa1423050:intron | 35.0% | |
| ATTCGTTTACCTCTTCCAAA+AGG | - | tig0025511:16097-16116 | Msa1423050:CDS | 35.0% | |
| !! | TAGATAATGCCTTTTGGAAG+AGG | + | tig0025511:16109-16128 | None:intergenic | 35.0% |
| TCTATCCACATATGCTTTGA+TGG | - | tig0025511:16266-16285 | Msa1423050:intron | 35.0% | |
| AAGAACCATCAAAGCATATG+TGG | + | tig0025511:16274-16293 | None:intergenic | 35.0% | |
| GTTCCTTCTGATATCATTTC+AGG | - | tig0025511:16345-16364 | Msa1423050:intron | 35.0% | |
| !!! | TCCTTGTTTTCCTGAATGTT+GGG | + | tig0025511:16433-16452 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCCTGAATGT+TGG | + | tig0025511:16434-16453 | None:intergenic | 35.0% |
| AACATTCAGGAAAACAAGGA+AGG | - | tig0025511:16433-16452 | Msa1423050:intron | 35.0% | |
| GGAGAAAAAACTTACTTTGC+CGG | + | tig0025511:16500-16519 | None:intergenic | 35.0% | |
| ! | TTCTTAGGTTGTCATTGGAA+TGG | - | tig0025511:16596-16615 | Msa1423050:intron | 35.0% |
| !! | ATTTTGAAGAGAAGGGAGTA+AGG | + | tig0025511:16749-16768 | None:intergenic | 35.0% |
| AAAGAGTGAGAAAGGAAAGT+CGG | + | tig0025511:16788-16807 | None:intergenic | 35.0% | |
| ! | ACTTTCCTTTCTCACTCTTT+TGG | - | tig0025511:16788-16807 | Msa1423050:intron | 35.0% |
| !! | AACTGTTTCTATTGTTACCC+AGG | + | tig0025511:16907-16926 | None:intergenic | 35.0% |
| ! | AGAAACAGTTCTTTTGGCAA+AGG | - | tig0025511:16917-16936 | Msa1423050:intron | 35.0% |
| ! | GAAACAGTTCTTTTGGCAAA+GGG | - | tig0025511:16918-16937 | Msa1423050:intron | 35.0% |
| TAACCCTTCTTAAAAAGGAG+AGG | + | tig0025511:16961-16980 | None:intergenic | 35.0% | |
| GTACCCAATTGTTTCAATTG+AGG | - | tig0025511:17295-17314 | Msa1423050:CDS | 35.0% | |
| GGATCCTCAATTGAAACAAT+TGG | + | tig0025511:17302-17321 | None:intergenic | 35.0% | |
| GGAACCAATGTACAAATTGT+TGG | - | tig0025511:17371-17390 | Msa1423050:intron | 35.0% | |
| !! | AATTGTTGGTGATGATCTCT+TGG | - | tig0025511:17385-17404 | Msa1423050:intron | 35.0% |
| AGCAAAAAGCAACAAATCAG+AGG | + | tig0025511:17480-17499 | None:intergenic | 35.0% | |
| AAACAACAGGTCAACCAAAT+TGG | - | tig0025511:17655-17674 | Msa1423050:intron | 35.0% | |
| GTAATCAACAAACACTAACC+TGG | + | tig0025511:18074-18093 | None:intergenic | 35.0% | |
| AAGCTCAAGCAGTTTCTAAT+TGG | - | tig0025511:18130-18149 | Msa1423050:intron | 35.0% | |
| TCAAGCAGTTTCTAATTGGT+TGG | - | tig0025511:18134-18153 | Msa1423050:intron | 35.0% | |
| CACTTTCAAAGCTTCTAGTA+TGG | + | tig0025511:18246-18265 | None:intergenic | 35.0% | |
| !! | CATACTAGAAGCTTTGAAAG+TGG | - | tig0025511:18244-18263 | Msa1423050:intron | 35.0% |
| !! | AGCTTTGAAAGTGGAAAAAC+CGG | - | tig0025511:18253-18272 | Msa1423050:intron | 35.0% |
| ! | TCAAACTAAGGTTGGTTATC+CGG | + | tig0025511:18275-18294 | None:intergenic | 35.0% |
| GTCAGCCCCATAAAATAAAA+AGG | + | tig0025511:18403-18422 | None:intergenic | 35.0% | |
| ! | CCACACAACTTTAAAAATCC+AGG | + | tig0025511:18435-18454 | None:intergenic | 35.0% |
| !!! | CCTGGATTTTTAAAGTTGTG+TGG | - | tig0025511:18432-18451 | Msa1423050:intron | 35.0% |
| ATTGGAACGACATTGAAAGT+AGG | + | tig0025511:18488-18507 | None:intergenic | 35.0% | |
| AGTTCAAGCAATAAAACCTG+AGG | + | tig0025511:18713-18732 | None:intergenic | 35.0% | |
| CAACTTAATCAATCGTGAAG+AGG | + | tig0025511:18765-18784 | None:intergenic | 35.0% | |
| CTGAAAAGAGAACTGTATTG+TGG | - | tig0025511:18819-18838 | Msa1423050:exon | 35.0% | |
| CAGACACCGTATAAAATATG+TGG | - | tig0025511:18858-18877 | Msa1423050:five_prime_UTR | 35.0% | |
| CACCGTATAAAATATGTGGT+TGG | - | tig0025511:18862-18881 | Msa1423050:five_prime_UTR | 35.0% | |
| AAATATGTGGTTGGGTGTTT+AGG | - | tig0025511:18871-18890 | Msa1423050:five_prime_UTR | 35.0% | |
| !! | TCACATCGATTTCTTCTCCA+TGG | - | tig0025511:13699-13718 | Msa1423050:three_prime_UTR | 40.0% |
| GTTGATATAACCGTATCCGA+TGG | - | tig0025511:13904-13923 | Msa1423050:three_prime_UTR | 40.0% | |
| ! | CTCCTAATGAAGGGTATAAC+TGG | + | tig0025511:14460-14479 | None:intergenic | 40.0% |
| GAAATGAATGAAGGCTCAGA+AGG | + | tig0025511:14729-14748 | None:intergenic | 40.0% | |
| !! | ATCATTGCACCAGCATTGAT+CGG | - | tig0025511:14979-14998 | Msa1423050:intron | 40.0% |
| CAATTTCTGTCTGCTGAGTT+GGG | + | tig0025511:15192-15211 | None:intergenic | 40.0% | |
| TCAATTTCTGTCTGCTGAGT+TGG | + | tig0025511:15193-15212 | None:intergenic | 40.0% | |
| TTCATGGTTCAGAAGCTTGA+CGG | - | tig0025511:15217-15236 | Msa1423050:CDS | 40.0% | |
| GACGGAACTGTTAATGAATG+GGG | - | tig0025511:15235-15254 | Msa1423050:CDS | 40.0% | |
| GAACTGTTAATGAATGGGGT+TGG | - | tig0025511:15239-15258 | Msa1423050:CDS | 40.0% | |
| AGACACTGCTAATATGGCAT+TGG | + | tig0025511:15380-15399 | None:intergenic | 40.0% | |
| TGCAAGAGACACTGCTAATA+TGG | + | tig0025511:15386-15405 | None:intergenic | 40.0% | |
| CAGTTAAGTACCACAGTTCA+TGG | + | tig0025511:15463-15482 | None:intergenic | 40.0% | |
| ACTTCTTTATGTCCATTCCG+TGG | - | tig0025511:15783-15802 | Msa1423050:intron | 40.0% | |
| CTTCTTTATGTCCATTCCGT+GGG | - | tig0025511:15784-15803 | Msa1423050:intron | 40.0% | |
| CAGCATATTGCAAACATTGC+CGG | - | tig0025511:15809-15828 | Msa1423050:intron | 40.0% | |
| CCCGCTTTCAATGTGATTAA+TGG | - | tig0025511:15857-15876 | Msa1423050:intron | 40.0% | |
| !! | ATTAATGGTGGATCACATGC+AGG | - | tig0025511:15872-15891 | Msa1423050:CDS | 40.0% |
| AGGAAACAAACTTGCAATGC+AGG | - | tig0025511:15892-15911 | Msa1423050:CDS | 40.0% | |
| TTCTGATGTCATGCATATGC+AGG | - | tig0025511:15977-15996 | Msa1423050:intron | 40.0% | |
| CATGCATATGCAGGAGTTTA+TGG | - | tig0025511:15986-16005 | Msa1423050:intron | 40.0% | |
| GAGTTTATGGTTCTTCCTGT+TGG | - | tig0025511:15999-16018 | Msa1423050:intron | 40.0% | |
| TTTCAAGGAAGCCATGAAGA+TGG | - | tig0025511:16031-16050 | Msa1423050:intron | 40.0% | |
| TTCAAGGAAGCCATGAAGAT+GGG | - | tig0025511:16032-16051 | Msa1423050:intron | 40.0% | |
| !! | TAAAAGCACCCGCTTATTAC+TGG | + | tig0025511:16201-16220 | None:intergenic | 40.0% |
| ! | TAATAAGCGGGTGCTTTTAC+TGG | - | tig0025511:16202-16221 | Msa1423050:intron | 40.0% |
| CAGCCTGAAATGATATCAGA+AGG | + | tig0025511:16351-16370 | None:intergenic | 40.0% | |
| GGTCAAGATGCAGTAAATGT+TGG | - | tig0025511:16388-16407 | Msa1423050:intron | 40.0% | |
| !! | GCAGTAAATGTTGGTGATGA+AGG | - | tig0025511:16397-16416 | Msa1423050:intron | 40.0% |
| !! | GTAAATGTTGGTGATGAAGG+TGG | - | tig0025511:16400-16419 | Msa1423050:intron | 40.0% |
| !! | CTTGTTTTCCTGAATGTTGG+GGG | + | tig0025511:16431-16450 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTCCTGAATGTTG+GGG | + | tig0025511:16432-16451 | None:intergenic | 40.0% |
| TCAGGAAAACAAGGAAGGTT+TGG | - | tig0025511:16438-16457 | Msa1423050:intron | 40.0% | |
| ATTGACAAAGCTGGTTACAC+CGG | - | tig0025511:16478-16497 | Msa1423050:CDS | 40.0% | |
| ! | AAGGATTTGAGACTTCTGAG+CGG | + | tig0025511:16730-16749 | None:intergenic | 40.0% |
| AAGCACCAAAAGAGTGAGAA+AGG | + | tig0025511:16796-16815 | None:intergenic | 40.0% | |
| CTAAGGTGTATAATCAGCAC+AGG | + | tig0025511:16862-16881 | None:intergenic | 40.0% | |
| TTGACAATCCAGAACAACGA+CGG | - | tig0025511:17215-17234 | Msa1423050:intron | 40.0% | |
| ! | AATTGAGGATCCTTTTGACC+AGG | - | tig0025511:17310-17329 | Msa1423050:CDS | 40.0% |
| !! | TACATTGGTTCCAATCTCAC+CGG | + | tig0025511:17363-17382 | None:intergenic | 40.0% |
| TAATATACAGACCTTGGGGT+TGG | + | tig0025511:17414-17433 | None:intergenic | 40.0% | |
| ! | ATGCAATGCTCTTTTGCTCA+AGG | - | tig0025511:17541-17560 | Msa1423050:CDS | 40.0% |
| ! | GGCAAATATTTTCTGCAGAG+AGG | - | tig0025511:17579-17598 | Msa1423050:intron | 40.0% |
| GACAAAGTTCAAACCTTCTG+TGG | + | tig0025511:17747-17766 | None:intergenic | 40.0% | |
| AACAGCAAGATCAGCAATGA+AGG | + | tig0025511:17890-17909 | None:intergenic | 40.0% | |
| ! | TTCATTGCTGATCTTGCTGT+TGG | - | tig0025511:17889-17908 | Msa1423050:intron | 40.0% |
| !! | TCTTGCTGTTGGTTTGTCAA+CGG | - | tig0025511:17900-17919 | Msa1423050:intron | 40.0% |
| GAACAGGGTCAAATTAAGAC+CGG | - | tig0025511:18012-18031 | Msa1423050:intron | 40.0% | |
| AACACTAACCTGGTTGTACT+TGG | + | tig0025511:18064-18083 | None:intergenic | 40.0% | |
| TACATTTGCTTCGGTTGCTT+CGG | - | tig0025511:18091-18110 | Msa1423050:intron | 40.0% | |
| TTGGCAGCTATTGAGAATTG+AGG | - | tig0025511:18164-18183 | Msa1423050:CDS | 40.0% | |
| CTCATTGCTCAAACTAAGGT+TGG | + | tig0025511:18283-18302 | None:intergenic | 40.0% | |
| !! | TCAAAAGTATCACTACCCAC+TGG | - | tig0025511:18567-18586 | Msa1423050:intron | 40.0% |
| TTGTTGTATACGTAGCCAGT+GGG | + | tig0025511:18585-18604 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATACGTAGCCAG+TGG | + | tig0025511:18586-18605 | None:intergenic | 40.0% |
| AAGCAATAAAACCTGAGGCT+CGG | + | tig0025511:18708-18727 | None:intergenic | 40.0% | |
| TTGTAAAGACAGATGCGTTG+TGG | - | tig0025511:18782-18801 | Msa1423050:CDS | 40.0% | |
| ! | AGAGTGCGTGTTTTGTGTGA+GGG | + | tig0025511:13637-13656 | None:intergenic | 45.0% |
| !! | AAGAGTGCGTGTTTTGTGTG+AGG | + | tig0025511:13638-13657 | None:intergenic | 45.0% |
| ACGACTGTCAAAGATCTGAC+GGG | + | tig0025511:13746-13765 | None:intergenic | 45.0% | |
| CACGACTGTCAAAGATCTGA+CGG | + | tig0025511:13747-13766 | None:intergenic | 45.0% | |
| !! | AGCGAAAGTACCATCGGATA+CGG | + | tig0025511:13917-13936 | None:intergenic | 45.0% |
| !! | AGCTCTAGCGAAAGTACCAT+CGG | + | tig0025511:13923-13942 | None:intergenic | 45.0% |
| GAGTGAAGCATACATACCAG+TGG | + | tig0025511:13965-13984 | None:intergenic | 45.0% | |
| GAGGCTCTTGAGTTAAGAGA+TGG | - | tig0025511:14335-14354 | Msa1423050:CDS | 45.0% | |
| GCTCTTGAGTTAAGAGATGG+AGG | - | tig0025511:14338-14357 | Msa1423050:CDS | 45.0% | |
| GATGGAGGATCTGACTATCT+TGG | - | tig0025511:14353-14372 | Msa1423050:CDS | 45.0% | |
| AGGATCTGACTATCTTGGCA+AGG | - | tig0025511:14358-14377 | Msa1423050:intron | 45.0% | |
| GGATCTGACTATCTTGGCAA+GGG | - | tig0025511:14359-14378 | Msa1423050:intron | 45.0% | |
| ! | TCTTGGCAAGGGTGTATCAA+AGG | - | tig0025511:14370-14389 | Msa1423050:intron | 45.0% |
| GCAGGTGCCAAGAAAAAATC+AGG | + | tig0025511:14936-14955 | None:intergenic | 45.0% | |
| !!! | GATTTTTTCTTGGCACCTGC+AGG | - | tig0025511:14936-14955 | Msa1423050:intron | 45.0% |
| ! | TGCAATGATGGTGTTCACGT+TGG | + | tig0025511:14968-14987 | None:intergenic | 45.0% |
| GATCAATGCTGGTGCAATGA+TGG | + | tig0025511:14980-14999 | None:intergenic | 45.0% | |
| CTTGCCTTTATGCAACGAAC+AGG | - | tig0025511:15165-15184 | Msa1423050:CDS | 45.0% | |
| !! | ATGGGGTTGGTGCAAACAAA+AGG | - | tig0025511:15252-15271 | Msa1423050:CDS | 45.0% |
| TTTGCAATATGCTGCACCCA+CGG | + | tig0025511:15803-15822 | None:intergenic | 45.0% | |
| CATTGCCGGTAACAAGAACT+TGG | - | tig0025511:15823-15842 | Msa1423050:intron | 45.0% | |
| ATCACATTGAAAGCGGGAAC+AGG | + | tig0025511:15854-15873 | None:intergenic | 45.0% | |
| CAAACTCAAGCACACGAGAA+CGG | + | tig0025511:15933-15952 | None:intergenic | 45.0% | |
| CTTCATGGCTTCCTTGAAAG+AGG | + | tig0025511:16030-16049 | None:intergenic | 45.0% | |
| GGAAGTCTATCACCATCTGA+AGG | - | tig0025511:16058-16077 | Msa1423050:CDS | 45.0% | |
| GTCTATCACCATCTGAAGGT+CGG | - | tig0025511:16062-16081 | Msa1423050:CDS | 45.0% | |
| GCATATGTGGATAGACACCA+GGG | + | tig0025511:16261-16280 | None:intergenic | 45.0% | |
| AGCATATGTGGATAGACACC+AGG | + | tig0025511:16262-16281 | None:intergenic | 45.0% | |
| CCCCAACATTCAGGAAAACA+AGG | - | tig0025511:16429-16448 | Msa1423050:intron | 45.0% | |
| ! | GTAACCAGCTTTGTCAATGG+CGG | + | tig0025511:16476-16495 | None:intergenic | 45.0% |
| ! | GGTGTAACCAGCTTTGTCAA+TGG | + | tig0025511:16479-16498 | None:intergenic | 45.0% |
| TGCAGCTTCTGAGTTCTACA+AGG | - | tig0025511:16623-16642 | Msa1423050:intron | 45.0% | |
| AGCTTCTGAGTTCTACAAGG+AGG | - | tig0025511:16626-16645 | Msa1423050:intron | 45.0% | |
| ! | AGGATTTGAGACTTCTGAGC+GGG | + | tig0025511:16729-16748 | None:intergenic | 45.0% |
| TGAGAAAGGAAAGTCGGTTG+GGG | + | tig0025511:16782-16801 | None:intergenic | 45.0% | |
| GTGAGAAAGGAAAGTCGGTT+GGG | + | tig0025511:16783-16802 | None:intergenic | 45.0% | |
| AGTGAGAAAGGAAAGTCGGT+TGG | + | tig0025511:16784-16803 | None:intergenic | 45.0% | |
| AGGTGTATAATCAGCACAGG+AGG | + | tig0025511:16859-16878 | None:intergenic | 45.0% | |
| CTCACAGAAGATATCTGGAG+AGG | - | tig0025511:17238-17257 | Msa1423050:intron | 45.0% | |
| ! | ATCCTTTTGACCAGGATGAC+TGG | - | tig0025511:17318-17337 | Msa1423050:CDS | 45.0% |
| ! | TCCTTTTGACCAGGATGACT+GGG | - | tig0025511:17319-17338 | Msa1423050:CDS | 45.0% |
| GAGCACTATGCTAAGATGAC+CGG | - | tig0025511:17341-17360 | Msa1423050:intron | 45.0% | |
| ATTGCCTTCTGAACTCTCTG+TGG | + | tig0025511:17509-17528 | None:intergenic | 45.0% | |
| GCAGAGAGGTTATTAGACCT+AGG | - | tig0025511:17593-17612 | Msa1423050:intron | 45.0% | |
| TCTCAGTCACGGATCCAATT+TGG | + | tig0025511:17672-17691 | None:intergenic | 45.0% | |
| GGCTTCAATACTCTCAGTCA+CGG | + | tig0025511:17683-17702 | None:intergenic | 45.0% | |
| ! | AGCCTTTTTGGACATCCTGA+CGG | + | tig0025511:17704-17723 | None:intergenic | 45.0% |
| GATGTCCAAAAAGGCTGGAT+GGG | - | tig0025511:17708-17727 | Msa1423050:intron | 45.0% | |
| ATGTCCAAAAAGGCTGGATG+GGG | - | tig0025511:17709-17728 | Msa1423050:intron | 45.0% | |
| AAGTTCAAACCTTCTGTGGC+TGG | + | tig0025511:17743-17762 | None:intergenic | 45.0% | |
| ! | CTAATTGGTTGGTGCTCACT+TGG | - | tig0025511:18145-18164 | Msa1423050:intron | 45.0% |
| GCAGCTATTGAGAATTGAGG+AGG | - | tig0025511:18167-18186 | Msa1423050:CDS | 45.0% | |
| TTGAGAATTGAGGAGGAGCT+TGG | - | tig0025511:18174-18193 | Msa1423050:CDS | 45.0% | |
| TGAGCAATGAGATTTGGCTG+CGG | - | tig0025511:18292-18311 | Msa1423050:intron | 45.0% | |
| GCAACCAAACTTTACTCCAC+CGG | - | tig0025511:18607-18626 | Msa1423050:CDS | 45.0% | |
| ATATAGCCAACCCAAGCAAC+CGG | + | tig0025511:18629-18648 | None:intergenic | 45.0% | |
| !! | TTTGAAAAATATTATAAAAT+AGG | - | tig0025511:14172-14191 | Msa1423050:three_prime_UTR | 5.0% |
| GGTCTCAGACACCTGCTTAT+GGG | + | tig0025511:13616-13635 | None:intergenic | 50.0% | |
| GATGGAGGTAATAGCAGCCA+TGG | + | tig0025511:13719-13738 | None:intergenic | 50.0% | |
| GGCTGCTATTACCTCCATCA+AGG | - | tig0025511:13720-13739 | Msa1423050:three_prime_UTR | 50.0% | |
| ! | AAAGATCTGACGGGCCTTGA+TGG | + | tig0025511:13737-13756 | None:intergenic | 50.0% |
| CGTCAGATCTTTGACAGTCG+TGG | - | tig0025511:13745-13764 | Msa1423050:three_prime_UTR | 50.0% | |
| GAAGTGAAGACGAACCTCGA+CGG | + | tig0025511:13779-13798 | None:intergenic | 50.0% | |
| ATACCAGTGGATGCACCACT+AGG | + | tig0025511:13952-13971 | None:intergenic | 50.0% | |
| GAAGGCTCAGAAGGATCCAT+TGG | + | tig0025511:14720-14739 | None:intergenic | 50.0% | |
| CATACCTTGCCGATCAATGC+TGG | + | tig0025511:14991-15010 | None:intergenic | 50.0% | |
| GGGTCCTGTTCGTTGCATAA+AGG | + | tig0025511:15172-15191 | None:intergenic | 50.0% | |
| TCTCTTGCAGTGTGCAAAGC+TGG | - | tig0025511:15397-15416 | Msa1423050:intron | 50.0% | |
| AATATGCTGCACCCACGGAA+TGG | + | tig0025511:15798-15817 | None:intergenic | 50.0% | |
| TTGAAAGAGGAGGCTCCAAC+AGG | + | tig0025511:16017-16036 | None:intergenic | 50.0% | |
| TGTTGGAGCCTCCTCTTTCA+AGG | - | tig0025511:16016-16035 | Msa1423050:intron | 50.0% | |
| CATGGCTTCCTTGAAAGAGG+AGG | + | tig0025511:16027-16046 | None:intergenic | 50.0% | |
| GACTTCCACACCCATCTTCA+TGG | + | tig0025511:16045-16064 | None:intergenic | 50.0% | |
| GATGCAAACCGACCTTCAGA+TGG | + | tig0025511:16073-16092 | None:intergenic | 50.0% | |
| AAGTCCGCCATTGACAAAGC+TGG | - | tig0025511:16469-16488 | Msa1423050:CDS | 50.0% | |
| ! | GGATTTGAGACTTCTGAGCG+GGG | + | tig0025511:16728-16747 | None:intergenic | 50.0% |
| ! | TCAGCACAGGAGGCATAATG+AGG | + | tig0025511:16849-16868 | None:intergenic | 50.0% |
| GACGGCTCACAGAAGATATC+TGG | - | tig0025511:17233-17252 | Msa1423050:intron | 50.0% | |
| TCCCAGTCATCCTGGTCAAA+AGG | + | tig0025511:17323-17342 | None:intergenic | 50.0% | |
| GCTAAGATGACCGGTGAGAT+TGG | - | tig0025511:17350-17369 | Msa1423050:intron | 50.0% | |
| TCTCTTGGTTACCAACCCCA+AGG | - | tig0025511:17400-17419 | Msa1423050:intron | 50.0% | |
| GTGTCCACAGAGAGTTCAGA+AGG | - | tig0025511:17502-17521 | Msa1423050:intron | 50.0% | |
| !! | CTGAGAGTATTGAAGCCGTC+AGG | - | tig0025511:17686-17705 | Msa1423050:intron | 50.0% |
| AGCCGTCAGGATGTCCAAAA+AGG | - | tig0025511:17699-17718 | Msa1423050:intron | 50.0% | |
| GTCAGGATGTCCAAAAAGGC+TGG | - | tig0025511:17703-17722 | Msa1423050:intron | 50.0% | |
| GGATGTCCAAAAAGGCTGGA+TGG | - | tig0025511:17707-17726 | Msa1423050:intron | 50.0% | |
| TGTTTGCAGTGGAGAGACTG+AGG | - | tig0025511:17861-17880 | Msa1423050:intron | 50.0% | |
| CTTCTAGTATGGCTCGACAG+GGG | + | tig0025511:18235-18254 | None:intergenic | 50.0% | |
| GCTTCTAGTATGGCTCGACA+GGG | + | tig0025511:18236-18255 | None:intergenic | 50.0% | |
| AGCTTCTAGTATGGCTCGAC+AGG | + | tig0025511:18237-18256 | None:intergenic | 50.0% | |
| GCAACCGGTGGAGTAAAGTT+TGG | + | tig0025511:18614-18633 | None:intergenic | 50.0% | |
| ! | ACTTTACTCCACCGGTTGCT+TGG | - | tig0025511:18615-18634 | Msa1423050:CDS | 50.0% |
| ! | CTTTACTCCACCGGTTGCTT+GGG | - | tig0025511:18616-18635 | Msa1423050:CDS | 50.0% |
| CAATAAAACCTGAGGCTCGG+TGG | + | tig0025511:18705-18724 | None:intergenic | 50.0% | |
| GGGTCTCAGACACCTGCTTA+TGG | + | tig0025511:13617-13636 | None:intergenic | 55.0% | |
| TGAAGACGAACCTCGACGGT+AGG | + | tig0025511:13775-13794 | None:intergenic | 55.0% | |
| GCTAGAGCTGCTGTTCCTAG+TGG | - | tig0025511:13934-13953 | Msa1423050:three_prime_UTR | 55.0% | |
| GTTCCTAGTGGTGCATCCAC+TGG | - | tig0025511:13946-13965 | Msa1423050:three_prime_UTR | 55.0% | |
| !! | TGCACCAGCATTGATCGGCA+AGG | - | tig0025511:14984-15003 | Msa1423050:CDS | 55.0% |
| !! | GGGTGTCGACTATGTTGCTG+CGG | + | tig0025511:15706-15725 | None:intergenic | 55.0% |
| GGAAGCCATGAAGATGGGTG+TGG | - | tig0025511:16037-16056 | Msa1423050:intron | 55.0% | |
| ATGTGGATAGACACCAGGGC+TGG | + | tig0025511:16257-16276 | None:intergenic | 55.0% | |
| ! | TGGCTTTGCCCCCAACATTC+AGG | - | tig0025511:16420-16439 | Msa1423050:intron | 55.0% |
| TCTGAGCGGGGAGATTGGTA+TGG | + | tig0025511:16716-16735 | None:intergenic | 55.0% | |
| AGACTTCTGAGCGGGGAGAT+TGG | + | tig0025511:16721-16740 | None:intergenic | 55.0% | |
| TCTGTGAGCCGTCGTTGTTC+TGG | + | tig0025511:17226-17245 | None:intergenic | 55.0% | |
| CATAGTGCTCCCAGTCATCC+TGG | + | tig0025511:17331-17350 | None:intergenic | 55.0% | |
| ! | GACACCCCATCCAGCCTTTT+TGG | + | tig0025511:17716-17735 | None:intergenic | 55.0% |
| GTGTCATGACCAGCCACAGA+AGG | - | tig0025511:17731-17750 | Msa1423050:intron | 55.0% | |
| ! | TTAAGACCGGAGCACCTTGC+AGG | - | tig0025511:18025-18044 | Msa1423050:intron | 55.0% |
| GCGTCTTGCCAAGTACAACC+AGG | - | tig0025511:18053-18072 | Msa1423050:intron | 55.0% | |
| ! | GGTGCTGAAGCAGTGTATGC+TGG | - | tig0025511:18195-18214 | Msa1423050:CDS | 55.0% |
| AGTATGGCTCGACAGGGGTA+CGG | + | tig0025511:18230-18249 | None:intergenic | 55.0% | |
| ! | GATCTGACGGGCCTTGATGG+AGG | + | tig0025511:13734-13753 | None:intergenic | 60.0% |
| TCGTGGCAATCCTACCGTCG+AGG | - | tig0025511:13762-13781 | Msa1423050:three_prime_UTR | 60.0% | |
| TCACGTTGGCAACAGCCTGC+AGG | + | tig0025511:14954-14973 | None:intergenic | 60.0% | |
| AGTCTCCTTTGTGCCAGCCC+TGG | - | tig0025511:16241-16260 | Msa1423050:intron | 60.0% | |
| ! | AGACACCAGGGCTGGCACAA+AGG | + | tig0025511:16249-16268 | None:intergenic | 60.0% |
| ! | CTCTGACCTGCAAGGTGCTC+CGG | + | tig0025511:18034-18053 | None:intergenic | 60.0% |
| GCAAGACGCTCTGACCTGCA+AGG | + | tig0025511:18042-18061 | None:intergenic | 60.0% | |
| GGGGCTGACAAGTTATCCCC+TGG | - | tig0025511:18414-18433 | Msa1423050:intron | 60.0% | |
| ! | ACTCCACCGGTTGCTTGGGT+TGG | - | tig0025511:18620-18639 | Msa1423050:CDS | 60.0% |
| TAGCCAACCCAAGCAACCGG+TGG | + | tig0025511:18626-18645 | None:intergenic | 60.0% | |
| ACCATCTACCACCGAGCCTC+AGG | - | tig0025511:18694-18713 | Msa1423050:intron | 60.0% | |
| !! | ACCTGAGGCTCGGTGGTAGA+TGG | + | tig0025511:18698-18717 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025511 | gene | 13579 | 18967 | 13579 | ID=Msa1423050;Name=Msa1423050 |
| tig0025511 | mRNA | 13579 | 18967 | 13579 | ID=Msa1423050-mRNA-1;Parent=Msa1423050;Name=Msa1423050-mRNA-1;_AED=0.14;_eAED=0.14;_QI=139|1|1|1|1|1|16|716|444 |
| tig0025511 | exon | 13579 | 14375 | 13579 | ID=Msa1423050-mRNA-1:exon:3044;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 14472 | 14528 | 14472 | ID=Msa1423050-mRNA-1:exon:3043;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 14625 | 14676 | 14625 | ID=Msa1423050-mRNA-1:exon:3042;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 14794 | 14882 | 14794 | ID=Msa1423050-mRNA-1:exon:3041;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 14984 | 15034 | 14984 | ID=Msa1423050-mRNA-1:exon:3040;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 15125 | 15319 | 15125 | ID=Msa1423050-mRNA-1:exon:3039;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 15866 | 15943 | 15866 | ID=Msa1423050-mRNA-1:exon:3038;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 16042 | 16179 | 16042 | ID=Msa1423050-mRNA-1:exon:3037;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 16467 | 16547 | 16467 | ID=Msa1423050-mRNA-1:exon:3036;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 16633 | 16734 | 16633 | ID=Msa1423050-mRNA-1:exon:3035;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 17096 | 17176 | 17096 | ID=Msa1423050-mRNA-1:exon:3034;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 17273 | 17359 | 17273 | ID=Msa1423050-mRNA-1:exon:3033;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 17541 | 17588 | 17541 | ID=Msa1423050-mRNA-1:exon:3032;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 18155 | 18219 | 18155 | ID=Msa1423050-mRNA-1:exon:3031;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 18579 | 18642 | 18579 | ID=Msa1423050-mRNA-1:exon:3030;Parent=Msa1423050-mRNA-1 |
| tig0025511 | exon | 18763 | 18967 | 18763 | ID=Msa1423050-mRNA-1:exon:3029;Parent=Msa1423050-mRNA-1 |
| tig0025511 | five_prime_UTR | 18829 | 18967 | 18829 | ID=Msa1423050-mRNA-1:five_prime_utr;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 18763 | 18828 | 18763 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 18579 | 18642 | 18579 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 18155 | 18219 | 18155 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 17541 | 17588 | 17541 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 17273 | 17359 | 17273 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 17096 | 17176 | 17096 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 16633 | 16734 | 16633 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 16467 | 16547 | 16467 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 16042 | 16179 | 16042 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 15866 | 15943 | 15866 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 15125 | 15319 | 15125 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 14984 | 15034 | 14984 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 14794 | 14882 | 14794 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 14625 | 14676 | 14625 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 14472 | 14528 | 14472 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | CDS | 14295 | 14375 | 14295 | ID=Msa1423050-mRNA-1:cds;Parent=Msa1423050-mRNA-1 |
| tig0025511 | three_prime_UTR | 13579 | 14294 | 13579 | ID=Msa1423050-mRNA-1:three_prime_utr;Parent=Msa1423050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
