Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880050 | XP_013450091.1 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880050 | sp|P42896|ENO_RICCO | 90.023 | 441 | 44 | 0 | 4 | 444 | 5 | 445 | 0.0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880050 | A0A072U338 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0880050 | 0.809842 | 1.549225e-50 | -8.615850e-47 |
| Msa0003330 | Msa0880050 | 0.836004 | 1.206570e-56 | -8.615850e-47 |
| Msa0016440 | Msa0880050 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0021290 | Msa0880050 | 0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa0025690 | Msa0880050 | -0.803641 | 3.164583e-49 | -8.615850e-47 |
| Msa0027590 | Msa0880050 | 0.802798 | 4.728381e-49 | -8.615850e-47 |
| Msa0029730 | Msa0880050 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0042510 | Msa0880050 | 0.814221 | 1.720236e-51 | -8.615850e-47 |
| Msa0050320 | Msa0880050 | -0.816359 | 5.758965e-52 | -8.615850e-47 |
| Msa0057850 | Msa0880050 | 0.802299 | 5.991633e-49 | -8.615850e-47 |
| Msa0071640 | Msa0880050 | 0.810493 | 1.121396e-50 | -8.615850e-47 |
| Msa0072570 | Msa0880050 | 0.811047 | 8.509006e-51 | -8.615850e-47 |
| Msa0089540 | Msa0880050 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
| Msa0094210 | Msa0880050 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0099090 | Msa0880050 | -0.805725 | 1.162049e-49 | -8.615850e-47 |
| Msa0113920 | Msa0880050 | 0.830483 | 2.862598e-55 | -8.615850e-47 |
| Msa0116600 | Msa0880050 | 0.810279 | 1.247299e-50 | -8.615850e-47 |
| Msa0602900 | Msa0880050 | 0.808026 | 3.790936e-50 | -8.615850e-47 |
| Msa0604890 | Msa0880050 | -0.813051 | 3.112759e-51 | -8.615850e-47 |
| Msa0619230 | Msa0880050 | 0.833835 | 4.244907e-56 | -8.615850e-47 |
| Msa0621190 | Msa0880050 | 0.846410 | 2.209821e-59 | -8.615850e-47 |
| Msa0643960 | Msa0880050 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0646180 | Msa0880050 | -0.815761 | 7.835004e-52 | -8.615850e-47 |
| Msa0655970 | Msa0880050 | 0.842039 | 3.298233e-58 | -8.615850e-47 |
| Msa0656320 | Msa0880050 | 0.835580 | 1.544785e-56 | -8.615850e-47 |
| Msa0709380 | Msa0880050 | 0.948917 | 3.634299e-107 | -8.615850e-47 |
| Msa0758420 | Msa0880050 | 0.825077 | 5.707195e-54 | -8.615850e-47 |
| Msa0790450 | Msa0880050 | 0.862340 | 5.431368e-64 | -8.615850e-47 |
| Msa0132890 | Msa0880050 | 0.824147 | 9.448024e-54 | -8.615850e-47 |
| Msa0154720 | Msa0880050 | -0.813538 | 2.432861e-51 | -8.615850e-47 |
| Msa0188740 | Msa0880050 | 0.872838 | 2.338279e-67 | -8.615850e-47 |
| Msa0192050 | Msa0880050 | 0.831652 | 1.478322e-55 | -8.615850e-47 |
| Msa0192300 | Msa0880050 | 0.849314 | 3.502364e-60 | -8.615850e-47 |
| Msa0195030 | Msa0880050 | 0.862800 | 3.921036e-64 | -8.615850e-47 |
| Msa0197920 | Msa0880050 | 0.804942 | 1.695544e-49 | -8.615850e-47 |
| Msa0216640 | Msa0880050 | 0.817229 | 3.675073e-52 | -8.615850e-47 |
| Msa0233550 | Msa0880050 | 0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa0237180 | Msa0880050 | 0.844575 | 6.942858e-59 | -8.615850e-47 |
| Msa0371490 | Msa0880050 | 0.822291 | 2.563010e-53 | -8.615850e-47 |
| Msa0373550 | Msa0880050 | 0.863503 | 2.377232e-64 | -8.615850e-47 |
| Msa0380590 | Msa0880050 | 0.816631 | 5.007040e-52 | -8.615850e-47 |
| Msa0382670 | Msa0880050 | 0.867830 | 1.024619e-65 | -8.615850e-47 |
| Msa0385030 | Msa0880050 | 0.823273 | 1.513626e-53 | -8.615850e-47 |
| Msa0387290 | Msa0880050 | 0.842317 | 2.783597e-58 | -8.615850e-47 |
| Msa0389800 | Msa0880050 | 0.831497 | 1.614115e-55 | -8.615850e-47 |
| Msa0416470 | Msa0880050 | 0.844902 | 5.670615e-59 | -8.615850e-47 |
| Msa0426090 | Msa0880050 | 0.807989 | 3.859398e-50 | -8.615850e-47 |
| Msa0432260 | Msa0880050 | -0.820744 | 5.834287e-53 | -8.615850e-47 |
| Msa0434370 | Msa0880050 | 0.804914 | 1.718517e-49 | -8.615850e-47 |
| Msa0436830 | Msa0880050 | -0.840468 | 8.537630e-58 | -8.615850e-47 |
| Msa0468140 | Msa0880050 | 0.833685 | 4.627327e-56 | -8.615850e-47 |
| Msa0468660 | Msa0880050 | 0.858174 | 9.874117e-63 | -8.615850e-47 |
| Msa0472480 | Msa0880050 | 0.814117 | 1.814125e-51 | -8.615850e-47 |
| Msa0479480 | Msa0880050 | 0.807041 | 6.136080e-50 | -8.615850e-47 |
| Msa0480940 | Msa0880050 | 0.816260 | 6.059954e-52 | -8.615850e-47 |
| Msa0239420 | Msa0880050 | 0.831682 | 1.453173e-55 | -8.615850e-47 |
| Msa0243750 | Msa0880050 | 0.807626 | 4.612033e-50 | -8.615850e-47 |
| Msa0270160 | Msa0880050 | 0.832968 | 6.981363e-56 | -8.615850e-47 |
| Msa0274940 | Msa0880050 | 0.857127 | 2.016540e-62 | -8.615850e-47 |
| Msa0281370 | Msa0880050 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0282290 | Msa0880050 | 0.807306 | 5.392107e-50 | -8.615850e-47 |
| Msa0301250 | Msa0880050 | 0.847306 | 1.257096e-59 | -8.615850e-47 |
| Msa0313060 | Msa0880050 | 0.832677 | 8.245360e-56 | -8.615850e-47 |
| Msa0315660 | Msa0880050 | 0.854989 | 8.524032e-62 | -8.615850e-47 |
| Msa0317300 | Msa0880050 | 0.819536 | 1.103024e-52 | -8.615850e-47 |
| Msa0341860 | Msa0880050 | -0.804013 | 2.647731e-49 | -8.615850e-47 |
| Msa0482760 | Msa0880050 | 0.833670 | 4.667730e-56 | -8.615850e-47 |
| Msa0500420 | Msa0880050 | 0.822564 | 2.214431e-53 | -8.615850e-47 |
| Msa0511760 | Msa0880050 | 0.813099 | 3.037963e-51 | -8.615850e-47 |
| Msa0514540 | Msa0880050 | 0.810702 | 1.010596e-50 | -8.615850e-47 |
| Msa0540160 | Msa0880050 | -0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0547920 | Msa0880050 | 0.807772 | 4.293941e-50 | -8.615850e-47 |
| Msa0573550 | Msa0880050 | 0.824151 | 9.428740e-54 | -8.615850e-47 |
| Msa0582070 | Msa0880050 | 0.803924 | 2.763584e-49 | -8.615850e-47 |
| Msa0597240 | Msa0880050 | 0.821954 | 3.067028e-53 | -8.615850e-47 |
| Msa0852620 | Msa0880050 | 0.806175 | 9.347142e-50 | -8.615850e-47 |
| Msa0880050 | Msa0881240 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
| Msa0880050 | Msa0929700 | 0.823346 | 1.455361e-53 | -8.615850e-47 |
| Msa0880050 | Msa0929790 | 0.813843 | 2.084193e-51 | -8.615850e-47 |
| Msa0880050 | Msa0930360 | 0.846802 | 1.727385e-59 | -8.615850e-47 |
| Msa0880050 | Msa0930790 | 0.848189 | 7.182581e-60 | -8.615850e-47 |
| Msa0880050 | Msa0935930 | -0.801915 | 7.188170e-49 | -8.615850e-47 |
| Msa0880050 | Msa0982260 | 0.831573 | 1.546400e-55 | -8.615850e-47 |
| Msa0880050 | Msa1037030 | 0.812393 | 4.337549e-51 | -8.615850e-47 |
| Msa0880050 | Msa1041830 | 0.977813 | 1.545032e-144 | -8.615850e-47 |
| Msa0880050 | Msa1046140 | 0.816526 | 5.284459e-52 | -8.615850e-47 |
| Msa0880050 | Msa1076200 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0880050 | Msa1124980 | 0.994950 | 1.215491e-211 | -8.615850e-47 |
| Msa0880050 | Msa1126690 | 0.812943 | 3.287188e-51 | -8.615850e-47 |
| Msa0880050 | Msa1152860 | 0.852662 | 3.983818e-61 | -8.615850e-47 |
| Msa0880050 | Msa1163320 | 0.812318 | 4.502690e-51 | -8.615850e-47 |
| Msa0880050 | Msa1167360 | 0.997374 | 2.065699e-241 | -8.615850e-47 |
| Msa0880050 | Msa1207880 | 0.807250 | 5.539900e-50 | -8.615850e-47 |
| Msa0880050 | Msa1218610 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
| Msa0880050 | Msa1225040 | 0.804488 | 2.108730e-49 | -8.615850e-47 |
| Msa0880050 | Msa1235950 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
| Msa0880050 | Msa1235980 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0880050 | Msa1237040 | 0.859296 | 4.563854e-63 | -8.615850e-47 |
| Msa0880050 | Msa1299220 | 0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa0880050 | Msa1307730 | 0.833636 | 4.759918e-56 | -8.615850e-47 |
| Msa0880050 | Msa1316100 | 0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa0880050 | Msa1317390 | 0.858625 | 7.246596e-63 | -8.615850e-47 |
| Msa0880050 | Msa1347610 | 0.804479 | 2.117674e-49 | -8.615850e-47 |
| Msa0880050 | Msa1359880 | -0.814427 | 1.549579e-51 | -8.615850e-47 |
| Msa0880050 | Msa1363910 | 0.800627 | 1.319058e-48 | -8.615850e-47 |
| Msa0880050 | Msa1387750 | 0.824815 | 6.580427e-54 | -8.615850e-47 |
| Msa0880050 | Msa1390760 | 0.835844 | 1.324696e-56 | -8.615850e-47 |
| Msa0880050 | Msa1403520 | 0.816181 | 6.312578e-52 | -8.615850e-47 |
| Msa0880050 | Msa1423050 | 0.999722 | 0.000000e+00 | -8.615850e-47 |
| Msa0880050 | Msa1450560 | 0.866694 | 2.364048e-65 | -8.615850e-47 |
| Msa0880050 | Msa1463510 | 0.839140 | 1.893719e-57 | -8.615850e-47 |
| Msa0880050 | Msa1465700 | 0.830152 | 3.449027e-55 | -8.615850e-47 |
| Msa0880050 | Msa1465890 | 0.826588 | 2.498498e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880050 | MtrunA17_Chr7g0265741 | 99.775 | 444 | 1 | 0 | 1 | 444 | 1 | 444 | 0.0 | 909 |
| Msa0880050 | MtrunA17_Chr6g0476311 | 87.640 | 445 | 54 | 1 | 1 | 444 | 2 | 446 | 0.0 | 816 |
| Msa0880050 | MtrunA17_Chr2g0307671 | 68.182 | 440 | 128 | 7 | 2 | 440 | 63 | 491 | 0.0 | 602 |
| Msa0880050 | MtrunA17_Chr5g0447301 | 60.268 | 224 | 81 | 4 | 2 | 224 | 45 | 261 | 1.07e-84 | 261 |
| Msa0880050 | MtrunA17_Chr5g0447311 | 59.155 | 213 | 84 | 3 | 226 | 438 | 19 | 228 | 8.35e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880050 | AT2G36530.1 | 89.189 | 444 | 48 | 0 | 1 | 444 | 1 | 444 | 0.0 | 821 |
| Msa0880050 | AT2G36530.2 | 89.336 | 422 | 45 | 0 | 23 | 444 | 12 | 433 | 0.0 | 780 |
| Msa0880050 | AT1G74030.1 | 67.352 | 438 | 131 | 6 | 4 | 440 | 51 | 477 | 0.0 | 599 |
| Msa0880050 | AT2G29560.1 | 57.763 | 438 | 174 | 7 | 2 | 438 | 45 | 472 | 1.83e-175 | 500 |
Find 165 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCATATGCAGGAGTTTA+TGG | 0.174723 | 6_1:-26112112 | Msa0880050:intron |
| TAATTAGACGTCATAAAATT+TGG | 0.221935 | 6_1:-26109445 | Msa0880050:three_prime_UTR |
| AAACAACAGGTCAACCAAAT+TGG | 0.247163 | 6_1:-26110442 | Msa0880050:intron |
| GTTACTACTCAACTGAAAAT+TGG | 0.253970 | 6_1:+26109594 | None:intergenic |
| TCTCAGTCACGGATCCAATT+TGG | 0.266564 | 6_1:+26110428 | None:intergenic |
| AAATATGTGGTTGGGTGTTT+AGG | 0.286685 | 6_1:-26109226 | Msa0880050:three_prime_UTR |
| ATAAAATTTGGTCATGCATT+AGG | 0.291097 | 6_1:-26109433 | Msa0880050:three_prime_UTR |
| CCCGCTTTCAATGTGATTAA+TGG | 0.296494 | 6_1:-26112241 | Msa0880050:CDS |
| TGCAAGAGACACTGCTAATA+TGG | 0.297215 | 6_1:+26112716 | None:intergenic |
| GGGTCTCAGACACCTGCTTA+TGG | 0.300267 | 6_1:+26114485 | None:intergenic |
| CACTTTCAAAGCTTCTAGTA+TGG | 0.308227 | 6_1:+26109854 | None:intergenic |
| TCAATTTCTGTCTGCTGAGT+TGG | 0.308960 | 6_1:+26112909 | None:intergenic |
| CCTTGTATAGAGGAATCTTT+AGG | 0.321207 | 6_1:+26112670 | None:intergenic |
| GGATCCTCAATTGAAACAAT+TGG | 0.323273 | 6_1:+26110798 | None:intergenic |
| GACTTCCACACCCATCTTCA+TGG | 0.331030 | 6_1:+26112056 | None:intergenic |
| TTAGTTTGAGCAATGAGATT+TGG | 0.336977 | 6_1:-26109811 | Msa0880050:three_prime_UTR |
| TACGATAAACAAATTAGATT+TGG | 0.337185 | 6_1:-26109180 | Msa0880050:three_prime_UTR |
| ACTTTACTCCACCGGTTGCT+TGG | 0.345294 | 6_1:-26109482 | Msa0880050:three_prime_UTR |
| TAATGTTCTTAGGTTGTCAT+TGG | 0.357703 | 6_1:-26111507 | Msa0880050:intron |
| CTTTACTCCACCGGTTGCTT+GGG | 0.361693 | 6_1:-26109481 | Msa0880050:three_prime_UTR |
| TCAGGAAAACAAGGAAGGTT+TGG | 0.362760 | 6_1:-26111660 | Msa0880050:CDS |
| GTCAGCCCCATAAAATAAAA+AGG | 0.371324 | 6_1:+26109697 | None:intergenic |
| CAATTTCTGTCTGCTGAGTT+GGG | 0.375682 | 6_1:+26112910 | None:intergenic |
| CAAAACCAAGTTCTTGTTAC+CGG | 0.376652 | 6_1:+26112270 | None:intergenic |
| AAAGATCTGACGGGCCTTGA+TGG | 0.379603 | 6_1:+26114365 | None:intergenic |
| AGCTTCTAGTATGGCTCGAC+AGG | 0.381624 | 6_1:+26109863 | None:intergenic |
| TTAAGACCGGAGCACCTTGC+AGG | 0.385327 | 6_1:-26110072 | Msa0880050:CDS |
| TGTTGGAGCCTCCTCTTTCA+AGG | 0.388440 | 6_1:-26112082 | Msa0880050:CDS |
| GACAGAAATTGACAACTTCA+TGG | 0.389489 | 6_1:-26112898 | Msa0880050:CDS |
| TCAAACTAAGGTTGGTTATC+CGG | 0.395194 | 6_1:+26109825 | None:intergenic |
| GACGGCTCACAGAAGATATC+TGG | 0.395388 | 6_1:-26110864 | Msa0880050:CDS |
| ACCTGAGGCTCGGTGGTAGA+TGG | 0.398239 | 6_1:+26109402 | None:intergenic |
| ATCATACGATTTGAACTTCA+AGG | 0.407971 | 6_1:-26111445 | Msa0880050:CDS |
| GCTAAGATGACCGGTGAGAT+TGG | 0.409902 | 6_1:-26110747 | Msa0880050:CDS |
| AGCCGTCAGGATGTCCAAAA+AGG | 0.410162 | 6_1:-26110398 | Msa0880050:CDS |
| GGTCTCAGACACCTGCTTAT+GGG | 0.420775 | 6_1:+26114486 | None:intergenic |
| CAGCATATTGCAAACATTGC+CGG | 0.421071 | 6_1:-26112289 | Msa0880050:CDS |
| TTCATTGCTGATCTTGCTGT+TGG | 0.424087 | 6_1:-26110208 | Msa0880050:CDS |
| TGACGGAACTGTTAATGAAT+GGG | 0.427486 | 6_1:-26112865 | Msa0880050:CDS |
| GCAACCGGTGGAGTAAAGTT+TGG | 0.427490 | 6_1:+26109486 | None:intergenic |
| CTCTGACCTGCAAGGTGCTC+CGG | 0.431664 | 6_1:+26110066 | None:intergenic |
| CATTGCCGGTAACAAGAACT+TGG | 0.438486 | 6_1:-26112275 | Msa0880050:CDS |
| GGTGCTGAAGCAGTGTATGC+TGG | 0.440630 | 6_1:-26109902 | Msa0880050:CDS |
| GTACCCAATTGTTTCAATTG+AGG | 0.440774 | 6_1:-26110802 | Msa0880050:CDS |
| AAATCTCATTGCTCAAACTA+AGG | 0.442849 | 6_1:+26109813 | None:intergenic |
| CTCATTGCTCAAACTAAGGT+TGG | 0.443078 | 6_1:+26109817 | None:intergenic |
| AACACTAACCTGGTTGTACT+TGG | 0.444307 | 6_1:+26110036 | None:intergenic |
| ATCACATTGAAAGCGGGAAC+AGG | 0.450874 | 6_1:+26112247 | None:intergenic |
| TCTCTTGCAGTGTGCAAAGC+TGG | 0.451916 | 6_1:-26112702 | Msa0880050:CDS |
| ACCATCTACCACCGAGCCTC+AGG | 0.453494 | 6_1:-26109403 | Msa0880050:three_prime_UTR |
| GATCCTCAATTGAAACAATT+GGG | 0.460561 | 6_1:+26110799 | None:intergenic |
| ACTCCACCGGTTGCTTGGGT+TGG | 0.461300 | 6_1:-26109477 | Msa0880050:three_prime_UTR |
| GAGTTTATGGTTCTTCCTGT+TGG | 0.470295 | 6_1:-26112099 | Msa0880050:CDS |
| TTGAAAGAGGAGGCTCCAAC+AGG | 0.471503 | 6_1:+26112084 | None:intergenic |
| CTTCATGGCTTCCTTGAAAG+AGG | 0.475418 | 6_1:+26112071 | None:intergenic |
| TCACATCGATTTCTTCTCCA+TGG | 0.477736 | 6_1:-26114400 | Msa0880050:exon |
| TCCCAGTCATCCTGGTCAAA+AGG | 0.478242 | 6_1:+26110777 | None:intergenic |
| GATGGAGGATCTGACTATCT+TGG | 0.478515 | 6_1:-26113745 | Msa0880050:CDS |
| AGGAAACAAACTTGCAATGC+AGG | 0.487451 | 6_1:-26112206 | Msa0880050:intron |
| TTGACGGAACTGTTAATGAA+TGG | 0.488553 | 6_1:-26112866 | Msa0880050:CDS |
| GTTCCTAGTGGTGCATCCAC+TGG | 0.489788 | 6_1:-26114153 | Msa0880050:intron |
| TTCATGGTTCAGAAGCTTGA+CGG | 0.490896 | 6_1:-26112882 | Msa0880050:CDS |
| CATAGTGCTCCCAGTCATCC+TGG | 0.492578 | 6_1:+26110769 | None:intergenic |
| ACCGTATAAAATATGTGGTT+GGG | 0.493409 | 6_1:-26109234 | Msa0880050:three_prime_UTR |
| GGAACCAATGTACAAATTGT+TGG | 0.493520 | 6_1:-26110726 | Msa0880050:CDS |
| CACCGTATAAAATATGTGGT+TGG | 0.494907 | 6_1:-26109235 | Msa0880050:three_prime_UTR |
| AATTGTTGGTGATGATCTCT+TGG | 0.498883 | 6_1:-26110712 | Msa0880050:CDS |
| GCTGTGATTAAGAAGAAATA+TGG | 0.499581 | 6_1:-26111731 | Msa0880050:CDS |
| ATCACCAACAATTTGTACAT+TGG | 0.504433 | 6_1:+26110722 | None:intergenic |
| AACAGCAAGATCAGCAATGA+AGG | 0.504723 | 6_1:+26110210 | None:intergenic |
| ATATAGCCAACCCAAGCAAC+CGG | 0.504740 | 6_1:+26109471 | None:intergenic |
| GGGGCTGACAAGTTATCCCC+TGG | 0.506892 | 6_1:-26109683 | Msa0880050:three_prime_UTR |
| CTGAGAGTATTGAAGCCGTC+AGG | 0.511646 | 6_1:-26110411 | Msa0880050:CDS |
| AAGTTCAAACCTTCTGTGGC+TGG | 0.511692 | 6_1:+26110357 | None:intergenic |
| CATACCTTGCCGATCAATGC+TGG | 0.514212 | 6_1:+26113110 | None:intergenic |
| TTGAGAATTGAGGAGGAGCT+TGG | 0.514397 | 6_1:-26109923 | Msa0880050:CDS |
| GCAGTAAATGTTGGTGATGA+AGG | 0.515363 | 6_1:-26111701 | Msa0880050:CDS |
| TTCTTAGGTTGTCATTGGAA+TGG | 0.517609 | 6_1:-26111502 | Msa0880050:intron |
| GATCAATGCTGGTGCAATGA+TGG | 0.520209 | 6_1:+26113121 | None:intergenic |
| ACTATAAATAACCCATAAGC+AGG | 0.523830 | 6_1:-26114497 | Msa0880050:five_prime_UTR |
| TTTCAAGGAAGCCATGAAGA+TGG | 0.524759 | 6_1:-26112067 | Msa0880050:CDS |
| TACATTGGTTCCAATCTCAC+CGG | 0.526389 | 6_1:+26110737 | None:intergenic |
| TTGGCAGCTATTGAGAATTG+AGG | 0.528228 | 6_1:-26109933 | Msa0880050:intron |
| AAAAGAAGCGAGAGTTGATA+GGG | 0.529115 | 6_1:-26114520 | Msa0880050:five_prime_UTR |
| GGATAAATTACCTTGTATAG+AGG | 0.532813 | 6_1:+26112660 | None:intergenic |
| CAACTTAATCAATCGTGAAG+AGG | 0.534326 | 6_1:+26109335 | None:intergenic |
| CCTAAAGATTCCTCTATACA+AGG | 0.534980 | 6_1:-26112670 | Msa0880050:intron |
| AGCGAAAGTACCATCGGATA+CGG | 0.536390 | 6_1:+26114185 | None:intergenic |
| AAGTCCGCCATTGACAAAGC+TGG | 0.537931 | 6_1:-26111629 | Msa0880050:CDS |
| TGCAGCTTCTGAGTTCTACA+AGG | 0.538609 | 6_1:-26111475 | Msa0880050:CDS |
| ATTGGAACGACATTGAAAGT+AGG | 0.539332 | 6_1:+26109612 | None:intergenic |
| GGTGTAACCAGCTTTGTCAA+TGG | 0.547964 | 6_1:+26111622 | None:intergenic |
| GCAACCAAACTTTACTCCAC+CGG | 0.548449 | 6_1:-26109490 | Msa0880050:three_prime_UTR |
| TTCAAGGAAGCCATGAAGAT+GGG | 0.550371 | 6_1:-26112066 | Msa0880050:CDS |
| ATCATTGCACCAGCATTGAT+CGG | 0.553718 | 6_1:-26113119 | Msa0880050:CDS |
| CCCCAACATTCAGGAAAACA+AGG | 0.562910 | 6_1:-26111669 | Msa0880050:CDS |
| GAGGCTCTTGAGTTAAGAGA+TGG | 0.564582 | 6_1:-26113763 | Msa0880050:CDS |
| GGCTGCTATTACCTCCATCA+AGG | 0.566953 | 6_1:-26114379 | Msa0880050:CDS |
| GCTTTCAATGTGATTAATGG+TGG | 0.568679 | 6_1:-26112238 | Msa0880050:CDS |
| CATACTAGAAGCTTTGAAAG+TGG | 0.569484 | 6_1:-26109853 | Msa0880050:exon |
| GGAAGCCATGAAGATGGGTG+TGG | 0.573653 | 6_1:-26112061 | Msa0880050:CDS |
| TCTTGGCAAGGGTGTATCAA+AGG | 0.577692 | 6_1:-26113728 | Msa0880050:intron |
| CAGACACCGTATAAAATATG+TGG | 0.578912 | 6_1:-26109239 | Msa0880050:three_prime_UTR |
| AGTATGGCTCGACAGGGGTA+CGG | 0.579765 | 6_1:+26109870 | None:intergenic |
| GTGTCCACAGAGAGTTCAGA+AGG | 0.580306 | 6_1:-26110595 | Msa0880050:intron |
| TCTTGCTGTTGGTTTGTCAA+CGG | 0.581023 | 6_1:-26110197 | Msa0880050:intron |
| TAATATACAGACCTTGGGGT+TGG | 0.582575 | 6_1:+26110686 | None:intergenic |
| AGACACTGCTAATATGGCAT+TGG | 0.587574 | 6_1:+26112722 | None:intergenic |
| GATGGAGGTAATAGCAGCCA+TGG | 0.587616 | 6_1:+26114383 | None:intergenic |
| AACATTCAGGAAAACAAGGA+AGG | 0.590478 | 6_1:-26111665 | Msa0880050:CDS |
| CTGAAAAGAGAACTGTATTG+TGG | 0.590789 | 6_1:-26109278 | Msa0880050:three_prime_UTR |
| CATGGCTTCCTTGAAAGAGG+AGG | 0.591923 | 6_1:+26112074 | None:intergenic |
| CCATTAATCACATTGAAAGC+GGG | 0.594481 | 6_1:+26112241 | None:intergenic |
| ATTAATGGTGGATCACATGC+AGG | 0.595757 | 6_1:-26112226 | Msa0880050:CDS |
| GAACAGGGTCAAATTAAGAC+CGG | 0.596686 | 6_1:-26110085 | Msa0880050:intron |
| CGTCAGATCTTTGACAGTCG+TGG | 0.597878 | 6_1:-26114354 | Msa0880050:CDS |
| AGGATCTGACTATCTTGGCA+AGG | 0.598318 | 6_1:-26113740 | Msa0880050:CDS |
| TGAAGACGAACCTCGACGGT+AGG | 0.599041 | 6_1:+26114327 | None:intergenic |
| AAGCAATAAAACCTGAGGCT+CGG | 0.599744 | 6_1:+26109392 | None:intergenic |
| GTGTCATGACCAGCCACAGA+AGG | 0.602021 | 6_1:-26110366 | Msa0880050:intron |
| CACGACTGTCAAAGATCTGA+CGG | 0.602120 | 6_1:+26114355 | None:intergenic |
| GCAAGACGCTCTGACCTGCA+AGG | 0.602568 | 6_1:+26110058 | None:intergenic |
| GGATCTGACTATCTTGGCAA+GGG | 0.603603 | 6_1:-26113739 | Msa0880050:CDS |
| ACGACTGTCAAAGATCTGAC+GGG | 0.605306 | 6_1:+26114356 | None:intergenic |
| ATGGGGTTGGTGCAAACAAA+AGG | 0.606880 | 6_1:-26112847 | Msa0880050:intron |
| ACCATTAATCACATTGAAAG+CGG | 0.610449 | 6_1:+26112240 | None:intergenic |
| GCTTCTAGTATGGCTCGACA+GGG | 0.610899 | 6_1:+26109864 | None:intergenic |
| GACAAAGTTCAAACCTTCTG+TGG | 0.611804 | 6_1:+26110353 | None:intergenic |
| AGCTCTAGCGAAAGTACCAT+CGG | 0.612079 | 6_1:+26114179 | None:intergenic |
| GCTAGAGCTGCTGTTCCTAG+TGG | 0.613085 | 6_1:-26114165 | Msa0880050:CDS |
| GAGCACTATGCTAAGATGAC+CGG | 0.616214 | 6_1:-26110756 | Msa0880050:CDS |
| GATCTGACGGGCCTTGATGG+AGG | 0.617525 | 6_1:+26114368 | None:intergenic |
| TTTGTTGTATACGTAGCCAG+TGG | 0.625526 | 6_1:+26109514 | None:intergenic |
| ATTGACAAAGCTGGTTACAC+CGG | 0.627043 | 6_1:-26111620 | Msa0880050:CDS |
| ATACCAGTGGATGCACCACT+AGG | 0.628478 | 6_1:+26114150 | None:intergenic |
| GATGCAAACCGACCTTCAGA+TGG | 0.629057 | 6_1:+26112028 | None:intergenic |
| CAATAAAACCTGAGGCTCGG+TGG | 0.630433 | 6_1:+26109395 | None:intergenic |
| GCTCTTGAGTTAAGAGATGG+AGG | 0.631055 | 6_1:-26113760 | Msa0880050:CDS |
| TGTTTGCAGTGGAGAGACTG+AGG | 0.633750 | 6_1:-26110236 | Msa0880050:intron |
| CTAATTATTAGGTATTTACG+AGG | 0.636389 | 6_1:-26113782 | Msa0880050:intron |
| TTGTTGTATACGTAGCCAGT+GGG | 0.637900 | 6_1:+26109515 | None:intergenic |
| GGCTTCAATACTCTCAGTCA+CGG | 0.640921 | 6_1:+26110417 | None:intergenic |
| TGCACCAGCATTGATCGGCA+AGG | 0.641409 | 6_1:-26113114 | Msa0880050:intron |
| GCAGCTATTGAGAATTGAGG+AGG | 0.642636 | 6_1:-26109930 | Msa0880050:intron |
| GAAGTGAAGACGAACCTCGA+CGG | 0.646889 | 6_1:+26114323 | None:intergenic |
| TCAAAAGTATCACTACCCAC+TGG | 0.647418 | 6_1:-26109530 | Msa0880050:three_prime_UTR |
| GGTCAAGATGCAGTAAATGT+TGG | 0.647677 | 6_1:-26111710 | Msa0880050:CDS |
| GCGTCTTGCCAAGTACAACC+AGG | 0.651331 | 6_1:-26110044 | Msa0880050:intron |
| TAGCCAACCCAAGCAACCGG+TGG | 0.655770 | 6_1:+26109474 | None:intergenic |
| TGAGCAATGAGATTTGGCTG+CGG | 0.657198 | 6_1:-26109805 | Msa0880050:three_prime_UTR |
| GGAAGTCTATCACCATCTGA+AGG | 0.660829 | 6_1:-26112040 | Msa0880050:intron |
| TGCAATGATGGTGTTCACGT+TGG | 0.669626 | 6_1:+26113133 | None:intergenic |
| GTAACCAGCTTTGTCAATGG+CGG | 0.670465 | 6_1:+26111625 | None:intergenic |
| TCTCTTGGTTACCAACCCCA+AGG | 0.674267 | 6_1:-26110697 | Msa0880050:intron |
| GAACTGTTAATGAATGGGGT+TGG | 0.674740 | 6_1:-26112860 | Msa0880050:CDS |
| TTGTAAAGACAGATGCGTTG+TGG | 0.674792 | 6_1:-26109315 | Msa0880050:three_prime_UTR |
| GTTGATATAACCGTATCCGA+TGG | 0.679936 | 6_1:-26114195 | Msa0880050:CDS |
| AGTTCAAGCAATAAAACCTG+AGG | 0.680048 | 6_1:+26109387 | None:intergenic |
| CTCACAGAAGATATCTGGAG+AGG | 0.680128 | 6_1:-26110859 | Msa0880050:CDS |
| GACGGAACTGTTAATGAATG+GGG | 0.691515 | 6_1:-26112864 | Msa0880050:CDS |
| GTAAATGTTGGTGATGAAGG+TGG | 0.697402 | 6_1:-26111698 | Msa0880050:CDS |
| TCGTGGCAATCCTACCGTCG+AGG | 0.699567 | 6_1:-26114337 | Msa0880050:intron |
| AGCTTCTGAGTTCTACAAGG+AGG | 0.702282 | 6_1:-26111472 | Msa0880050:CDS |
| TTGACAATCCAGAACAACGA+CGG | 0.703661 | 6_1:-26110882 | Msa0880050:intron |
| CTTCTAGTATGGCTCGACAG+GGG | 0.721455 | 6_1:+26109865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTCAAAAATAAAATTAAA+CGG | + | chr6_1:26109872-26109891 | None:intergenic | 10.0% |
| !!! | TATTTTTGAAACTAATTATT+AGG | - | chr6_1:26109880-26109899 | Msa0880050:CDS | 10.0% |
| !! | AGTTGTATATATAAATAAAA+TGG | + | chr6_1:26112599-26112618 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTCTTT+TGG | - | chr6_1:26113011-26113030 | Msa0880050:intron | 10.0% |
| !!! | TGAATTTTTTTTATTCTTTT+GGG | - | chr6_1:26113012-26113031 | Msa0880050:intron | 10.0% |
| !! | AATCTGATTATGATTATTAT+AGG | - | chr6_1:26109456-26109475 | Msa0880050:three_prime_UTR | 15.0% |
| !!! | TTTTTGTGTGTTAATTATTA+TGG | - | chr6_1:26109602-26109621 | Msa0880050:three_prime_UTR | 15.0% |
| !! | TTGAAAATCATCATAAATAA+CGG | + | chr6_1:26109654-26109673 | None:intergenic | 15.0% |
| !!! | TAATAACTTGATATATCTTT+TGG | + | chr6_1:26110108-26110127 | None:intergenic | 15.0% |
| !!! | TGTATTCATCTAATATTTTT+TGG | - | chr6_1:26111140-26111159 | Msa0880050:intron | 15.0% |
| !!! | ATCTAATATTTTTTGGTATT+CGG | - | chr6_1:26111147-26111166 | Msa0880050:intron | 15.0% |
| !! | ATAAAAAGGTCAAAATTTAT+TGG | + | chr6_1:26113965-26113984 | None:intergenic | 15.0% |
| !!! | ATTTTGACCTTTTTATTTTA+TGG | - | chr6_1:26113969-26113988 | Msa0880050:intron | 15.0% |
| !!! | TTTTGACCTTTTTATTTTAT+GGG | - | chr6_1:26113970-26113989 | Msa0880050:intron | 15.0% |
| !!! | TTTTCATCAATTCTATTTTG+TGG | - | chr6_1:26109561-26109580 | Msa0880050:three_prime_UTR | 20.0% |
| !! | GAAATCTACTTAAATATCTA+TGG | + | chr6_1:26109791-26109810 | None:intergenic | 20.0% |
| !! | TTAAGAAACAGAAAATATGA+TGG | + | chr6_1:26109982-26110001 | None:intergenic | 20.0% |
| !! | AAATAGAACGAAATGAAAAT+AGG | + | chr6_1:26110179-26110198 | None:intergenic | 20.0% |
| !!! | GTCTTTTATTTTGTCTTTTT+TGG | - | chr6_1:26110199-26110218 | Msa0880050:CDS | 20.0% |
| !!! | TTTATTTTGTCTTTTTTGGA+AGG | - | chr6_1:26110203-26110222 | Msa0880050:CDS | 20.0% |
| !! | TATGATAAAAAAACTGTCAT+CGG | + | chr6_1:26110635-26110654 | None:intergenic | 20.0% |
| !! | TCACTTAACTATACTATAAT+GGG | + | chr6_1:26110660-26110679 | None:intergenic | 20.0% |
| !! | TTCACTTAACTATACTATAA+TGG | + | chr6_1:26110661-26110680 | None:intergenic | 20.0% |
| !! | AAAATTAATTCCATTACTAG+AGG | - | chr6_1:26110699-26110718 | Msa0880050:CDS | 20.0% |
| !!! | AAAATTTAGATAATGCCTTT+TGG | + | chr6_1:26111690-26111709 | None:intergenic | 20.0% |
| !!! | AGATTTGTTTCATATTATTG+AGG | + | chr6_1:26111719-26111738 | None:intergenic | 20.0% |
| !!! | ACATTTTGTATAATGTTCTT+AGG | - | chr6_1:26112156-26112175 | Msa0880050:intron | 20.0% |
| !! | TATAAATAAAATGGCTAACA+AGG | + | chr6_1:26112590-26112609 | None:intergenic | 20.0% |
| !! | TATATATACAACTTGAAAGA+TGG | - | chr6_1:26112606-26112625 | Msa0880050:intron | 20.0% |
| !!! | TCAACATAAATGTTTTTTTG+AGG | + | chr6_1:26112736-26112755 | None:intergenic | 20.0% |
| !! | AAAAGGAAACGTTATTATAT+TGG | + | chr6_1:26113553-26113572 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTTTATTTTATG+GGG | - | chr6_1:26113971-26113990 | Msa0880050:intron | 20.0% |
| !! | TAATTAGACGTCATAAAATT+TGG | - | chr6_1:26114228-26114247 | Msa0880050:intron | 20.0% |
| !! | TACGATAAACAAATTAGATT+TGG | - | chr6_1:26114493-26114512 | Msa0880050:five_prime_UTR | 20.0% |
| ! | CTAATTATTAGGTATTTACG+AGG | - | chr6_1:26109891-26109910 | Msa0880050:CDS | 25.0% |
| !! | AAAGTATTTCTCCTAATGAA+GGG | + | chr6_1:26110044-26110063 | None:intergenic | 25.0% |
| !!! | AAAAGTATTTCTCCTAATGA+AGG | + | chr6_1:26110045-26110064 | None:intergenic | 25.0% |
| !!! | TTGTGCTTTAGATTTCTTTT+TGG | - | chr6_1:26110142-26110161 | Msa0880050:intron | 25.0% |
| ! | TTTCCATTCCTTCATAAAAT+AGG | + | chr6_1:26110247-26110266 | None:intergenic | 25.0% |
| !! | TGGTAGTTTTCTAATCATAA+AGG | + | chr6_1:26110275-26110294 | None:intergenic | 25.0% |
| ! | TATGATTAGAAAACTACCAA+TGG | - | chr6_1:26110276-26110295 | Msa0880050:intron | 25.0% |
| ! | TTGAGAAAAGAAATGAATGA+AGG | + | chr6_1:26110313-26110332 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGAAATGAAACA+AGG | + | chr6_1:26110364-26110383 | None:intergenic | 25.0% |
| !! | TATTACATTAGTGTTTTCTC+TGG | - | chr6_1:26110596-26110615 | Msa0880050:intron | 25.0% |
| ! | CACTTAACTATACTATAATG+GGG | + | chr6_1:26110659-26110678 | None:intergenic | 25.0% |
| ! | AAAAAACAATCAGAACTAGA+AGG | + | chr6_1:26110910-26110929 | None:intergenic | 25.0% |
| !!! | TTCTAGTTCTGATTGTTTTT+TGG | - | chr6_1:26110909-26110928 | Msa0880050:intron | 25.0% |
| !!! | TTCTGATTGTTTTTTGGTTT+TGG | - | chr6_1:26110915-26110934 | Msa0880050:intron | 25.0% |
| ! | TGGTACTTAACTGTATTTAA+AGG | - | chr6_1:26111044-26111063 | Msa0880050:intron | 25.0% |
| ! | AATGGACATAAAAGAAAACT+GGG | + | chr6_1:26111302-26111321 | None:intergenic | 25.0% |
| ! | AAATGGACATAAAAGAAAAC+TGG | + | chr6_1:26111303-26111322 | None:intergenic | 25.0% |
| ! | AAACGACTCAACTAAAAAAA+TGG | + | chr6_1:26111320-26111339 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACCAGTAATAAG+CGG | - | chr6_1:26111764-26111783 | Msa0880050:intron | 25.0% |
| !! | CTCTATTCAATTTTCTGTTT+CGG | - | chr6_1:26112094-26112113 | Msa0880050:CDS | 25.0% |
| !! | AATTTTCTGTTTCGGTTATT+TGG | - | chr6_1:26112102-26112121 | Msa0880050:CDS | 25.0% |
| ! | TTCTCAGATTTATTCATTTG+AGG | - | chr6_1:26112126-26112145 | Msa0880050:intron | 25.0% |
| ! | TCTCAGATTTATTCATTTGA+GGG | - | chr6_1:26112127-26112146 | Msa0880050:intron | 25.0% |
| !!! | GTGAATAATTTTGAAGAGAA+GGG | + | chr6_1:26112331-26112350 | None:intergenic | 25.0% |
| !!! | AGTGAATAATTTTGAAGAGA+AGG | + | chr6_1:26112332-26112351 | None:intergenic | 25.0% |
| !! | AACAATAGAAACAGTTCTTT+TGG | - | chr6_1:26112486-26112505 | Msa0880050:intron | 25.0% |
| ! | ATTCTTAACCCTTCTTAAAA+AGG | + | chr6_1:26112541-26112560 | None:intergenic | 25.0% |
| ! | TCATATAATATACAGACCTT+GGG | + | chr6_1:26112995-26113014 | None:intergenic | 25.0% |
| ! | TTCATATAATATACAGACCT+TGG | + | chr6_1:26112996-26113015 | None:intergenic | 25.0% |
| ! | ATCAATACATTTATCTACCT+AGG | + | chr6_1:26113189-26113208 | None:intergenic | 25.0% |
| ! | CAACTGTAAGATATTTAACA+AGG | - | chr6_1:26113378-26113397 | Msa0880050:intron | 25.0% |
| !!! | TCATATATTTTTGTTTGCAG+TGG | - | chr6_1:26113426-26113445 | Msa0880050:intron | 25.0% |
| ! | AACGTTATTATATTGGACAT+GGG | + | chr6_1:26113546-26113565 | None:intergenic | 25.0% |
| ! | AAACGTTATTATATTGGACA+TGG | + | chr6_1:26113547-26113566 | None:intergenic | 25.0% |
| ! | TCAAGATACGATTAACAAAA+AGG | + | chr6_1:26113570-26113589 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACATTTGCTT+CGG | - | chr6_1:26113658-26113677 | Msa0880050:intron | 25.0% |
| ! | ATAAAATTTGGTCATGCATT+AGG | - | chr6_1:26114240-26114259 | Msa0880050:intron | 25.0% |
| ACTATAAATAACCCATAAGC+AGG | - | chr6_1:26109176-26109195 | Msa0880050:three_prime_UTR | 30.0% | |
| ! | AGATTTCGTAGATTTTACTC+TGG | - | chr6_1:26109804-26109823 | Msa0880050:three_prime_UTR | 30.0% |
| ! | CTCAACTACCTATTTTATGA+AGG | - | chr6_1:26110236-26110255 | Msa0880050:intron | 30.0% |
| ! | CTACCTATTTTATGAAGGAA+TGG | - | chr6_1:26110241-26110260 | Msa0880050:intron | 30.0% |
| AAAAAGAAATGAAACAAGGC+AGG | + | chr6_1:26110360-26110379 | None:intergenic | 30.0% | |
| !!! | GCCTTGTTTCATTTCTTTTT+TGG | - | chr6_1:26110360-26110379 | Msa0880050:intron | 30.0% |
| TACTGCATAAAAAAGTGAGA+TGG | - | chr6_1:26110435-26110454 | Msa0880050:CDS | 30.0% | |
| !!! | ATTCTCACCTGATTTTTTCT+TGG | - | chr6_1:26110501-26110520 | Msa0880050:intron | 30.0% |
| GGATAAATTACCTTGTATAG+AGG | + | chr6_1:26111016-26111035 | None:intergenic | 30.0% | |
| ATGGACATAAAAGAAAACTG+GGG | + | chr6_1:26111301-26111320 | None:intergenic | 30.0% | |
| ACCATTAATCACATTGAAAG+CGG | + | chr6_1:26111436-26111455 | None:intergenic | 30.0% | |
| TACTGGTAAAAAACAAAGCT+TGG | + | chr6_1:26111759-26111778 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGTAATAAGC+GGG | - | chr6_1:26111765-26111784 | Msa0880050:intron | 30.0% |
| GCTGTGATTAAGAAGAAATA+TGG | - | chr6_1:26111942-26111961 | Msa0880050:intron | 30.0% | |
| CGAAACAGAAAATTGAATAG+AGG | + | chr6_1:26112096-26112115 | None:intergenic | 30.0% | |
| ! | TAATGTTCTTAGGTTGTCAT+TGG | - | chr6_1:26112166-26112185 | Msa0880050:intron | 30.0% |
| ATCATACGATTTGAACTTCA+AGG | - | chr6_1:26112228-26112247 | Msa0880050:CDS | 30.0% | |
| TAATAACAACTCTGGTACTA+AGG | + | chr6_1:26112454-26112473 | None:intergenic | 30.0% | |
| GATCCTCAATTGAAACAATT+GGG | + | chr6_1:26112877-26112896 | None:intergenic | 30.0% | |
| ATCACCAACAATTTGTACAT+TGG | + | chr6_1:26112954-26112973 | None:intergenic | 30.0% | |
| CATATAATATACAGACCTTG+GGG | + | chr6_1:26112994-26113013 | None:intergenic | 30.0% | |
| !! | TCAAGGTACTCTCATTTTAT+TGG | - | chr6_1:26113134-26113153 | Msa0880050:CDS | 30.0% |
| ! | CTTGACATATTTGAAACAAC+AGG | - | chr6_1:26113218-26113237 | Msa0880050:intron | 30.0% |
| ACAATTGTTGAACTGAGATA+AGG | + | chr6_1:26113507-26113526 | None:intergenic | 30.0% | |
| TTGTTAATCGTATCTTGAAC+AGG | - | chr6_1:26113572-26113591 | Msa0880050:intron | 30.0% | |
| TGTTAATCGTATCTTGAACA+GGG | - | chr6_1:26113573-26113592 | Msa0880050:intron | 30.0% | |
| AAATCTCATTGCTCAAACTA+AGG | + | chr6_1:26113863-26113882 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAGCAATGAGATT+TGG | - | chr6_1:26113862-26113881 | Msa0880050:intron | 30.0% |
| ! | ACACAACTTTAAAAATCCAG+GGG | + | chr6_1:26114009-26114028 | None:intergenic | 30.0% |
| ! | CACACAACTTTAAAAATCCA+GGG | + | chr6_1:26114010-26114029 | None:intergenic | 30.0% |
| GTTACTACTCAACTGAAAAT+TGG | + | chr6_1:26114082-26114101 | None:intergenic | 30.0% | |
| ! | TGAGTAGTAACGATTTTTGT+TGG | - | chr6_1:26114091-26114110 | Msa0880050:intron | 30.0% |
| ACCGTATAAAATATGTGGTT+GGG | - | chr6_1:26114439-26114458 | Msa0880050:five_prime_UTR | 30.0% | |
| ! | ACCCAACCACATATTTTATA+CGG | + | chr6_1:26114443-26114462 | None:intergenic | 30.0% |
| !! | AAAAGAAGCGAGAGTTGATA+GGG | - | chr6_1:26109153-26109172 | Msa0880050:three_prime_UTR | 35.0% |
| ATCGATGAGCGATAATAGAT+CGG | + | chr6_1:26109403-26109422 | None:intergenic | 35.0% | |
| !! | AGATTTTACTCTGGTACTGA+TGG | - | chr6_1:26109813-26109832 | Msa0880050:three_prime_UTR | 35.0% |
| TTCCAGTTATACCCTTCATT+AGG | - | chr6_1:26110030-26110049 | Msa0880050:intron | 35.0% | |
| ATCACAATGACCTCTAGTAA+TGG | + | chr6_1:26110712-26110731 | None:intergenic | 35.0% | |
| GACAGAAATTGACAACTTCA+TGG | - | chr6_1:26110775-26110794 | Msa0880050:CDS | 35.0% | |
| TTGACGGAACTGTTAATGAA+TGG | - | chr6_1:26110807-26110826 | Msa0880050:CDS | 35.0% | |
| TGACGGAACTGTTAATGAAT+GGG | - | chr6_1:26110808-26110827 | Msa0880050:CDS | 35.0% | |
| TGTGATAGATTACGATCTAC+AGG | + | chr6_1:26110868-26110887 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTTGGTTTCAGCT+TGG | - | chr6_1:26110926-26110945 | Msa0880050:intron | 35.0% |
| CCTTGTATAGAGGAATCTTT+AGG | + | chr6_1:26111006-26111025 | None:intergenic | 35.0% | |
| CCTAAAGATTCCTCTATACA+AGG | - | chr6_1:26111003-26111022 | Msa0880050:intron | 35.0% | |
| GGTAATTTATCCATGAACTG+TGG | - | chr6_1:26111024-26111043 | Msa0880050:intron | 35.0% | |
| ATTTAAAGGCCTCTGTTAGT+TGG | - | chr6_1:26111058-26111077 | Msa0880050:intron | 35.0% | |
| TCAACTTCAATTACACGACA+TGG | + | chr6_1:26111086-26111105 | None:intergenic | 35.0% | |
| TTCGGTACTTAAGAACAACA+TGG | - | chr6_1:26111165-26111184 | Msa0880050:intron | 35.0% | |
| CAAAACCAAGTTCTTGTTAC+CGG | + | chr6_1:26111406-26111425 | None:intergenic | 35.0% | |
| CCATTAATCACATTGAAAGC+GGG | + | chr6_1:26111435-26111454 | None:intergenic | 35.0% | |
| GCTTTCAATGTGATTAATGG+TGG | - | chr6_1:26111435-26111454 | Msa0880050:intron | 35.0% | |
| ATTCGTTTACCTCTTCCAAA+AGG | - | chr6_1:26111672-26111691 | Msa0880050:CDS | 35.0% | |
| !! | TAGATAATGCCTTTTGGAAG+AGG | + | chr6_1:26111684-26111703 | None:intergenic | 35.0% |
| TCTATCCACATATGCTTTGA+TGG | - | chr6_1:26111841-26111860 | Msa0880050:intron | 35.0% | |
| AAGAACCATCAAAGCATATG+TGG | + | chr6_1:26111849-26111868 | None:intergenic | 35.0% | |
| GTTCCTTCTGATATCATTTC+AGG | - | chr6_1:26111920-26111939 | Msa0880050:intron | 35.0% | |
| !!! | TCCTTGTTTTCCTGAATGTT+GGG | + | chr6_1:26112008-26112027 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCCTGAATGT+TGG | + | chr6_1:26112009-26112028 | None:intergenic | 35.0% |
| AACATTCAGGAAAACAAGGA+AGG | - | chr6_1:26112008-26112027 | Msa0880050:intron | 35.0% | |
| GGAGAAAAAACTTACTTTGC+CGG | + | chr6_1:26112075-26112094 | None:intergenic | 35.0% | |
| ! | TTCTTAGGTTGTCATTGGAA+TGG | - | chr6_1:26112171-26112190 | Msa0880050:intron | 35.0% |
| !! | ATTTTGAAGAGAAGGGAGTA+AGG | + | chr6_1:26112324-26112343 | None:intergenic | 35.0% |
| AAAGAGTGAGAAAGGAAAGT+CGG | + | chr6_1:26112363-26112382 | None:intergenic | 35.0% | |
| ! | ACTTTCCTTTCTCACTCTTT+TGG | - | chr6_1:26112363-26112382 | Msa0880050:intron | 35.0% |
| AGGCTTTCTAATAACAACTC+TGG | + | chr6_1:26112462-26112481 | None:intergenic | 35.0% | |
| ! | AGAGTTGTTATTAGAAAGCC+TGG | - | chr6_1:26112461-26112480 | Msa0880050:intron | 35.0% |
| ! | GAGTTGTTATTAGAAAGCCT+GGG | - | chr6_1:26112462-26112481 | Msa0880050:intron | 35.0% |
| !! | AACTGTTTCTATTGTTACCC+AGG | + | chr6_1:26112482-26112501 | None:intergenic | 35.0% |
| ! | AGAAACAGTTCTTTTGGCAA+AGG | - | chr6_1:26112492-26112511 | Msa0880050:intron | 35.0% |
| ! | GAAACAGTTCTTTTGGCAAA+GGG | - | chr6_1:26112493-26112512 | Msa0880050:intron | 35.0% |
| !! | ATATCCGCTCCTTTTTAAGA+AGG | - | chr6_1:26112529-26112548 | Msa0880050:intron | 35.0% |
| !! | TATCCGCTCCTTTTTAAGAA+GGG | - | chr6_1:26112530-26112549 | Msa0880050:intron | 35.0% |
| TAACCCTTCTTAAAAAGGAG+CGG | + | chr6_1:26112536-26112555 | None:intergenic | 35.0% | |
| GTACCCAATTGTTTCAATTG+AGG | - | chr6_1:26112871-26112890 | Msa0880050:CDS | 35.0% | |
| GGATCCTCAATTGAAACAAT+TGG | + | chr6_1:26112878-26112897 | None:intergenic | 35.0% | |
| GGAACCAATGTACAAATTGT+TGG | - | chr6_1:26112947-26112966 | Msa0880050:intron | 35.0% | |
| !! | AATTGTTGGTGATGATCTCT+TGG | - | chr6_1:26112961-26112980 | Msa0880050:intron | 35.0% |
| AGCAAAAAGCAACAAATCAG+AGG | + | chr6_1:26113056-26113075 | None:intergenic | 35.0% | |
| AAACAACAGGTCAACCAAAT+TGG | - | chr6_1:26113231-26113250 | Msa0880050:intron | 35.0% | |
| GTAATCAACAAACACTAACC+TGG | + | chr6_1:26113650-26113669 | None:intergenic | 35.0% | |
| AAGCTCAAGCAGTTTCTAAT+TGG | - | chr6_1:26113706-26113725 | Msa0880050:intron | 35.0% | |
| TCAAGCAGTTTCTAATTGGT+TGG | - | chr6_1:26113710-26113729 | Msa0880050:intron | 35.0% | |
| CACTTTCAAAGCTTCTAGTA+TGG | + | chr6_1:26113822-26113841 | None:intergenic | 35.0% | |
| !! | CATACTAGAAGCTTTGAAAG+TGG | - | chr6_1:26113820-26113839 | Msa0880050:intron | 35.0% |
| !! | AGCTTTGAAAGTGGAAAAAC+CGG | - | chr6_1:26113829-26113848 | Msa0880050:intron | 35.0% |
| ! | TCAAACTAAGGTTGGTTATC+CGG | + | chr6_1:26113851-26113870 | None:intergenic | 35.0% |
| GTCAGCCCCATAAAATAAAA+AGG | + | chr6_1:26113979-26113998 | None:intergenic | 35.0% | |
| ! | CCACACAACTTTAAAAATCC+AGG | + | chr6_1:26114011-26114030 | None:intergenic | 35.0% |
| !!! | CCTGGATTTTTAAAGTTGTG+TGG | - | chr6_1:26114008-26114027 | Msa0880050:intron | 35.0% |
| ATTGGAACGACATTGAAAGT+AGG | + | chr6_1:26114064-26114083 | None:intergenic | 35.0% | |
| AGTTCAAGCAATAAAACCTG+AGG | + | chr6_1:26114289-26114308 | None:intergenic | 35.0% | |
| CAACTTAATCAATCGTGAAG+AGG | + | chr6_1:26114341-26114360 | None:intergenic | 35.0% | |
| CTGAAAAGAGAACTGTATTG+TGG | - | chr6_1:26114395-26114414 | Msa0880050:exon | 35.0% | |
| CAGACACCGTATAAAATATG+TGG | - | chr6_1:26114434-26114453 | Msa0880050:five_prime_UTR | 35.0% | |
| CACCGTATAAAATATGTGGT+TGG | - | chr6_1:26114438-26114457 | Msa0880050:five_prime_UTR | 35.0% | |
| AAATATGTGGTTGGGTGTTT+AGG | - | chr6_1:26114447-26114466 | Msa0880050:five_prime_UTR | 35.0% | |
| !! | TCACATCGATTTCTTCTCCA+TGG | - | chr6_1:26109273-26109292 | Msa0880050:three_prime_UTR | 40.0% |
| GTTGATATAACCGTATCCGA+TGG | - | chr6_1:26109478-26109497 | Msa0880050:three_prime_UTR | 40.0% | |
| ! | CTCCTAATGAAGGGTATAAC+TGG | + | chr6_1:26110035-26110054 | None:intergenic | 40.0% |
| GAAATGAATGAAGGCTCAGA+AGG | + | chr6_1:26110304-26110323 | None:intergenic | 40.0% | |
| !! | ATCATTGCACCAGCATTGAT+CGG | - | chr6_1:26110554-26110573 | Msa0880050:intron | 40.0% |
| CAATTTCTGTCTGCTGAGTT+GGG | + | chr6_1:26110766-26110785 | None:intergenic | 40.0% | |
| TCAATTTCTGTCTGCTGAGT+TGG | + | chr6_1:26110767-26110786 | None:intergenic | 40.0% | |
| TTCATGGTTCAGAAGCTTGA+CGG | - | chr6_1:26110791-26110810 | Msa0880050:CDS | 40.0% | |
| GACGGAACTGTTAATGAATG+GGG | - | chr6_1:26110809-26110828 | Msa0880050:CDS | 40.0% | |
| GAACTGTTAATGAATGGGGT+TGG | - | chr6_1:26110813-26110832 | Msa0880050:CDS | 40.0% | |
| AGACACTGCTAATATGGCAT+TGG | + | chr6_1:26110954-26110973 | None:intergenic | 40.0% | |
| TGCAAGAGACACTGCTAATA+TGG | + | chr6_1:26110960-26110979 | None:intergenic | 40.0% | |
| CAGTTAAGTACCACAGTTCA+TGG | + | chr6_1:26111037-26111056 | None:intergenic | 40.0% | |
| ACTTCTTTATGTCCATTCCG+TGG | - | chr6_1:26111358-26111377 | Msa0880050:intron | 40.0% | |
| CTTCTTTATGTCCATTCCGT+GGG | - | chr6_1:26111359-26111378 | Msa0880050:intron | 40.0% | |
| CAGCATATTGCAAACATTGC+CGG | - | chr6_1:26111384-26111403 | Msa0880050:intron | 40.0% | |
| CCCGCTTTCAATGTGATTAA+TGG | - | chr6_1:26111432-26111451 | Msa0880050:intron | 40.0% | |
| !! | ATTAATGGTGGATCACATGC+AGG | - | chr6_1:26111447-26111466 | Msa0880050:CDS | 40.0% |
| AGGAAACAAACTTGCAATGC+AGG | - | chr6_1:26111467-26111486 | Msa0880050:CDS | 40.0% | |
| TTCTGATGTCATGCATATGC+AGG | - | chr6_1:26111552-26111571 | Msa0880050:intron | 40.0% | |
| CATGCATATGCAGGAGTTTA+TGG | - | chr6_1:26111561-26111580 | Msa0880050:intron | 40.0% | |
| GAGTTTATGGTTCTTCCTGT+TGG | - | chr6_1:26111574-26111593 | Msa0880050:intron | 40.0% | |
| TTTCAAGGAAGCCATGAAGA+TGG | - | chr6_1:26111606-26111625 | Msa0880050:intron | 40.0% | |
| TTCAAGGAAGCCATGAAGAT+GGG | - | chr6_1:26111607-26111626 | Msa0880050:intron | 40.0% | |
| !! | TAAAAGCACCCGCTTATTAC+TGG | + | chr6_1:26111776-26111795 | None:intergenic | 40.0% |
| ! | TAATAAGCGGGTGCTTTTAC+TGG | - | chr6_1:26111777-26111796 | Msa0880050:intron | 40.0% |
| CAGCCTGAAATGATATCAGA+AGG | + | chr6_1:26111926-26111945 | None:intergenic | 40.0% | |
| GGTCAAGATGCAGTAAATGT+TGG | - | chr6_1:26111963-26111982 | Msa0880050:intron | 40.0% | |
| !! | GCAGTAAATGTTGGTGATGA+AGG | - | chr6_1:26111972-26111991 | Msa0880050:intron | 40.0% |
| !! | GTAAATGTTGGTGATGAAGG+TGG | - | chr6_1:26111975-26111994 | Msa0880050:intron | 40.0% |
| !! | CTTGTTTTCCTGAATGTTGG+GGG | + | chr6_1:26112006-26112025 | None:intergenic | 40.0% |
| !!! | CCTTGTTTTCCTGAATGTTG+GGG | + | chr6_1:26112007-26112026 | None:intergenic | 40.0% |
| TCAGGAAAACAAGGAAGGTT+TGG | - | chr6_1:26112013-26112032 | Msa0880050:intron | 40.0% | |
| ATTGACAAAGCTGGTTACAC+CGG | - | chr6_1:26112053-26112072 | Msa0880050:CDS | 40.0% | |
| ! | AAGGATTTGAGACTTCTGAG+CGG | + | chr6_1:26112305-26112324 | None:intergenic | 40.0% |
| AAGCACCAAAAGAGTGAGAA+AGG | + | chr6_1:26112371-26112390 | None:intergenic | 40.0% | |
| CTAAGGTGTATAATCAGCAC+AGG | + | chr6_1:26112437-26112456 | None:intergenic | 40.0% | |
| TTGACAATCCAGAACAACGA+CGG | - | chr6_1:26112791-26112810 | Msa0880050:intron | 40.0% | |
| ! | AATTGAGGATCCTTTTGACC+AGG | - | chr6_1:26112886-26112905 | Msa0880050:CDS | 40.0% |
| !! | TACATTGGTTCCAATCTCAC+CGG | + | chr6_1:26112939-26112958 | None:intergenic | 40.0% |
| TAATATACAGACCTTGGGGT+TGG | + | chr6_1:26112990-26113009 | None:intergenic | 40.0% | |
| ! | ATGCAATGCTCTTTTGCTCA+AGG | - | chr6_1:26113117-26113136 | Msa0880050:CDS | 40.0% |
| ! | GGCAAATATTTTCTGCAGAG+AGG | - | chr6_1:26113155-26113174 | Msa0880050:intron | 40.0% |
| GACAAAGTTCAAACCTTCTG+TGG | + | chr6_1:26113323-26113342 | None:intergenic | 40.0% | |
| AACAGCAAGATCAGCAATGA+AGG | + | chr6_1:26113466-26113485 | None:intergenic | 40.0% | |
| ! | TTCATTGCTGATCTTGCTGT+TGG | - | chr6_1:26113465-26113484 | Msa0880050:intron | 40.0% |
| !! | TCTTGCTGTTGGTTTGTCAA+CGG | - | chr6_1:26113476-26113495 | Msa0880050:intron | 40.0% |
| GAACAGGGTCAAATTAAGAC+CGG | - | chr6_1:26113588-26113607 | Msa0880050:intron | 40.0% | |
| AACACTAACCTGGTTGTACT+TGG | + | chr6_1:26113640-26113659 | None:intergenic | 40.0% | |
| TACATTTGCTTCGGTTGCTT+CGG | - | chr6_1:26113667-26113686 | Msa0880050:intron | 40.0% | |
| TTGGCAGCTATTGAGAATTG+AGG | - | chr6_1:26113740-26113759 | Msa0880050:CDS | 40.0% | |
| CTCATTGCTCAAACTAAGGT+TGG | + | chr6_1:26113859-26113878 | None:intergenic | 40.0% | |
| !! | TCAAAAGTATCACTACCCAC+TGG | - | chr6_1:26114143-26114162 | Msa0880050:intron | 40.0% |
| TTGTTGTATACGTAGCCAGT+GGG | + | chr6_1:26114161-26114180 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATACGTAGCCAG+TGG | + | chr6_1:26114162-26114181 | None:intergenic | 40.0% |
| AAGCAATAAAACCTGAGGCT+CGG | + | chr6_1:26114284-26114303 | None:intergenic | 40.0% | |
| TTGTAAAGACAGATGCGTTG+TGG | - | chr6_1:26114358-26114377 | Msa0880050:CDS | 40.0% | |
| ! | AGAGTGCGTGTTTTGTGTGA+GGG | + | chr6_1:26109211-26109230 | None:intergenic | 45.0% |
| !! | AAGAGTGCGTGTTTTGTGTG+AGG | + | chr6_1:26109212-26109231 | None:intergenic | 45.0% |
| ACGACTGTCAAAGATCTGAC+GGG | + | chr6_1:26109320-26109339 | None:intergenic | 45.0% | |
| CACGACTGTCAAAGATCTGA+CGG | + | chr6_1:26109321-26109340 | None:intergenic | 45.0% | |
| !! | AGCGAAAGTACCATCGGATA+CGG | + | chr6_1:26109491-26109510 | None:intergenic | 45.0% |
| !! | AGCTCTAGCGAAAGTACCAT+CGG | + | chr6_1:26109497-26109516 | None:intergenic | 45.0% |
| GAGTGAAGCATACATACCAG+TGG | + | chr6_1:26109539-26109558 | None:intergenic | 45.0% | |
| GAGGCTCTTGAGTTAAGAGA+TGG | - | chr6_1:26109910-26109929 | Msa0880050:CDS | 45.0% | |
| GCTCTTGAGTTAAGAGATGG+AGG | - | chr6_1:26109913-26109932 | Msa0880050:CDS | 45.0% | |
| GATGGAGGATCTGACTATCT+TGG | - | chr6_1:26109928-26109947 | Msa0880050:CDS | 45.0% | |
| AGGATCTGACTATCTTGGCA+AGG | - | chr6_1:26109933-26109952 | Msa0880050:intron | 45.0% | |
| GGATCTGACTATCTTGGCAA+GGG | - | chr6_1:26109934-26109953 | Msa0880050:intron | 45.0% | |
| ! | TCTTGGCAAGGGTGTATCAA+AGG | - | chr6_1:26109945-26109964 | Msa0880050:intron | 45.0% |
| GCAGGTGCCAAGAAAAAATC+AGG | + | chr6_1:26110511-26110530 | None:intergenic | 45.0% | |
| !!! | GATTTTTTCTTGGCACCTGC+AGG | - | chr6_1:26110511-26110530 | Msa0880050:intron | 45.0% |
| ! | TGCAATGATGGTGTTCACGT+TGG | + | chr6_1:26110543-26110562 | None:intergenic | 45.0% |
| GATCAATGCTGGTGCAATGA+TGG | + | chr6_1:26110555-26110574 | None:intergenic | 45.0% | |
| CTTGCCTTTATGCAACGAAC+AGG | - | chr6_1:26110739-26110758 | Msa0880050:CDS | 45.0% | |
| !! | ATGGGGTTGGTGCAAACAAA+AGG | - | chr6_1:26110826-26110845 | Msa0880050:CDS | 45.0% |
| GACATGGATCCAACTAACAG+AGG | + | chr6_1:26111070-26111089 | None:intergenic | 45.0% | |
| TTTGCAATATGCTGCACCCA+CGG | + | chr6_1:26111378-26111397 | None:intergenic | 45.0% | |
| CATTGCCGGTAACAAGAACT+TGG | - | chr6_1:26111398-26111417 | Msa0880050:intron | 45.0% | |
| ATCACATTGAAAGCGGGAAC+AGG | + | chr6_1:26111429-26111448 | None:intergenic | 45.0% | |
| CAAACTCAAGCACACGAGAA+CGG | + | chr6_1:26111508-26111527 | None:intergenic | 45.0% | |
| CTTCATGGCTTCCTTGAAAG+AGG | + | chr6_1:26111605-26111624 | None:intergenic | 45.0% | |
| GGAAGTCTATCACCATCTGA+AGG | - | chr6_1:26111633-26111652 | Msa0880050:CDS | 45.0% | |
| GTCTATCACCATCTGAAGGT+CGG | - | chr6_1:26111637-26111656 | Msa0880050:CDS | 45.0% | |
| GCATATGTGGATAGACACCA+GGG | + | chr6_1:26111836-26111855 | None:intergenic | 45.0% | |
| AGCATATGTGGATAGACACC+AGG | + | chr6_1:26111837-26111856 | None:intergenic | 45.0% | |
| CCCCAACATTCAGGAAAACA+AGG | - | chr6_1:26112004-26112023 | Msa0880050:intron | 45.0% | |
| ! | GTAACCAGCTTTGTCAATGG+CGG | + | chr6_1:26112051-26112070 | None:intergenic | 45.0% |
| ! | GGTGTAACCAGCTTTGTCAA+TGG | + | chr6_1:26112054-26112073 | None:intergenic | 45.0% |
| TGCAGCTTCTGAGTTCTACA+AGG | - | chr6_1:26112198-26112217 | Msa0880050:intron | 45.0% | |
| AGCTTCTGAGTTCTACAAGG+AGG | - | chr6_1:26112201-26112220 | Msa0880050:intron | 45.0% | |
| ! | AGGATTTGAGACTTCTGAGC+GGG | + | chr6_1:26112304-26112323 | None:intergenic | 45.0% |
| TGAGAAAGGAAAGTCGGTTG+GGG | + | chr6_1:26112357-26112376 | None:intergenic | 45.0% | |
| GTGAGAAAGGAAAGTCGGTT+GGG | + | chr6_1:26112358-26112377 | None:intergenic | 45.0% | |
| AGTGAGAAAGGAAAGTCGGT+TGG | + | chr6_1:26112359-26112378 | None:intergenic | 45.0% | |
| AGGTGTATAATCAGCACAGG+AGG | + | chr6_1:26112434-26112453 | None:intergenic | 45.0% | |
| CTCACAGAAGATATCTGGAG+AGG | - | chr6_1:26112814-26112833 | Msa0880050:intron | 45.0% | |
| ! | ATCCTTTTGACCAGGATGAC+TGG | - | chr6_1:26112894-26112913 | Msa0880050:CDS | 45.0% |
| ! | TCCTTTTGACCAGGATGACT+GGG | - | chr6_1:26112895-26112914 | Msa0880050:CDS | 45.0% |
| GAGCACTATGCTAAGATGAC+CGG | - | chr6_1:26112917-26112936 | Msa0880050:intron | 45.0% | |
| ATTGCCTTCTGAACTCTCTG+TGG | + | chr6_1:26113085-26113104 | None:intergenic | 45.0% | |
| GCAGAGAGGTTATTAGACCT+AGG | - | chr6_1:26113169-26113188 | Msa0880050:intron | 45.0% | |
| TCTCAGTCACGGATCCAATT+TGG | + | chr6_1:26113248-26113267 | None:intergenic | 45.0% | |
| GGCTTCAATACTCTCAGTCA+CGG | + | chr6_1:26113259-26113278 | None:intergenic | 45.0% | |
| ! | AGCCTTTTTGGACATCCTGA+CGG | + | chr6_1:26113280-26113299 | None:intergenic | 45.0% |
| GATGTCCAAAAAGGCTGGAT+GGG | - | chr6_1:26113284-26113303 | Msa0880050:intron | 45.0% | |
| ATGTCCAAAAAGGCTGGATG+GGG | - | chr6_1:26113285-26113304 | Msa0880050:intron | 45.0% | |
| AAGTTCAAACCTTCTGTGGC+TGG | + | chr6_1:26113319-26113338 | None:intergenic | 45.0% | |
| ! | CTAATTGGTTGGTGCTCACT+TGG | - | chr6_1:26113721-26113740 | Msa0880050:intron | 45.0% |
| GCAGCTATTGAGAATTGAGG+AGG | - | chr6_1:26113743-26113762 | Msa0880050:CDS | 45.0% | |
| TTGAGAATTGAGGAGGAGCT+TGG | - | chr6_1:26113750-26113769 | Msa0880050:CDS | 45.0% | |
| TGAGCAATGAGATTTGGCTG+CGG | - | chr6_1:26113868-26113887 | Msa0880050:intron | 45.0% | |
| GCAACCAAACTTTACTCCAC+CGG | - | chr6_1:26114183-26114202 | Msa0880050:CDS | 45.0% | |
| ATATAGCCAACCCAAGCAAC+CGG | + | chr6_1:26114205-26114224 | None:intergenic | 45.0% | |
| !! | TTTGAAAAATATTATAAAAT+AGG | - | chr6_1:26109746-26109765 | Msa0880050:three_prime_UTR | 5.0% |
| GGTCTCAGACACCTGCTTAT+GGG | + | chr6_1:26109190-26109209 | None:intergenic | 50.0% | |
| GATGGAGGTAATAGCAGCCA+TGG | + | chr6_1:26109293-26109312 | None:intergenic | 50.0% | |
| GGCTGCTATTACCTCCATCA+AGG | - | chr6_1:26109294-26109313 | Msa0880050:three_prime_UTR | 50.0% | |
| ! | AAAGATCTGACGGGCCTTGA+TGG | + | chr6_1:26109311-26109330 | None:intergenic | 50.0% |
| CGTCAGATCTTTGACAGTCG+TGG | - | chr6_1:26109319-26109338 | Msa0880050:three_prime_UTR | 50.0% | |
| GAAGTGAAGACGAACCTCGA+CGG | + | chr6_1:26109353-26109372 | None:intergenic | 50.0% | |
| ATACCAGTGGATGCACCACT+AGG | + | chr6_1:26109526-26109545 | None:intergenic | 50.0% | |
| GAAGGCTCAGAAGGATCCAT+TGG | + | chr6_1:26110295-26110314 | None:intergenic | 50.0% | |
| CATACCTTGCCGATCAATGC+TGG | + | chr6_1:26110566-26110585 | None:intergenic | 50.0% | |
| GGGTCCTGTTCGTTGCATAA+AGG | + | chr6_1:26110746-26110765 | None:intergenic | 50.0% | |
| TCTCTTGCAGTGTGCAAAGC+TGG | - | chr6_1:26110971-26110990 | Msa0880050:intron | 50.0% | |
| AATATGCTGCACCCACGGAA+TGG | + | chr6_1:26111373-26111392 | None:intergenic | 50.0% | |
| TTGAAAGAGGAGGCTCCAAC+AGG | + | chr6_1:26111592-26111611 | None:intergenic | 50.0% | |
| TGTTGGAGCCTCCTCTTTCA+AGG | - | chr6_1:26111591-26111610 | Msa0880050:intron | 50.0% | |
| CATGGCTTCCTTGAAAGAGG+AGG | + | chr6_1:26111602-26111621 | None:intergenic | 50.0% | |
| GACTTCCACACCCATCTTCA+TGG | + | chr6_1:26111620-26111639 | None:intergenic | 50.0% | |
| GATGCAAACCGACCTTCAGA+TGG | + | chr6_1:26111648-26111667 | None:intergenic | 50.0% | |
| AAGTCCGCCATTGACAAAGC+TGG | - | chr6_1:26112044-26112063 | Msa0880050:CDS | 50.0% | |
| ! | GGATTTGAGACTTCTGAGCG+GGG | + | chr6_1:26112303-26112322 | None:intergenic | 50.0% |
| ! | TCAGCACAGGAGGCATAATG+AGG | + | chr6_1:26112424-26112443 | None:intergenic | 50.0% |
| GACGGCTCACAGAAGATATC+TGG | - | chr6_1:26112809-26112828 | Msa0880050:intron | 50.0% | |
| TCCCAGTCATCCTGGTCAAA+AGG | + | chr6_1:26112899-26112918 | None:intergenic | 50.0% | |
| GCTAAGATGACCGGTGAGAT+TGG | - | chr6_1:26112926-26112945 | Msa0880050:intron | 50.0% | |
| TCTCTTGGTTACCAACCCCA+AGG | - | chr6_1:26112976-26112995 | Msa0880050:intron | 50.0% | |
| GTGTCCACAGAGAGTTCAGA+AGG | - | chr6_1:26113078-26113097 | Msa0880050:intron | 50.0% | |
| !! | CTGAGAGTATTGAAGCCGTC+AGG | - | chr6_1:26113262-26113281 | Msa0880050:intron | 50.0% |
| AGCCGTCAGGATGTCCAAAA+AGG | - | chr6_1:26113275-26113294 | Msa0880050:intron | 50.0% | |
| GTCAGGATGTCCAAAAAGGC+TGG | - | chr6_1:26113279-26113298 | Msa0880050:intron | 50.0% | |
| GGATGTCCAAAAAGGCTGGA+TGG | - | chr6_1:26113283-26113302 | Msa0880050:intron | 50.0% | |
| TGTTTGCAGTGGAGAGACTG+AGG | - | chr6_1:26113437-26113456 | Msa0880050:intron | 50.0% | |
| CTTCTAGTATGGCTCGACAG+GGG | + | chr6_1:26113811-26113830 | None:intergenic | 50.0% | |
| GCTTCTAGTATGGCTCGACA+GGG | + | chr6_1:26113812-26113831 | None:intergenic | 50.0% | |
| AGCTTCTAGTATGGCTCGAC+AGG | + | chr6_1:26113813-26113832 | None:intergenic | 50.0% | |
| GCAACCGGTGGAGTAAAGTT+TGG | + | chr6_1:26114190-26114209 | None:intergenic | 50.0% | |
| ! | ACTTTACTCCACCGGTTGCT+TGG | - | chr6_1:26114191-26114210 | Msa0880050:CDS | 50.0% |
| ! | CTTTACTCCACCGGTTGCTT+GGG | - | chr6_1:26114192-26114211 | Msa0880050:CDS | 50.0% |
| CAATAAAACCTGAGGCTCGG+TGG | + | chr6_1:26114281-26114300 | None:intergenic | 50.0% | |
| GGGTCTCAGACACCTGCTTA+TGG | + | chr6_1:26109191-26109210 | None:intergenic | 55.0% | |
| TGAAGACGAACCTCGACGGT+AGG | + | chr6_1:26109349-26109368 | None:intergenic | 55.0% | |
| GCTAGAGCTGCTGTTCCTAG+TGG | - | chr6_1:26109508-26109527 | Msa0880050:three_prime_UTR | 55.0% | |
| GTTCCTAGTGGTGCATCCAC+TGG | - | chr6_1:26109520-26109539 | Msa0880050:three_prime_UTR | 55.0% | |
| !! | TGCACCAGCATTGATCGGCA+AGG | - | chr6_1:26110559-26110578 | Msa0880050:CDS | 55.0% |
| !! | GGGTGTCGACTATGTTGCTG+CGG | + | chr6_1:26111281-26111300 | None:intergenic | 55.0% |
| GGAAGCCATGAAGATGGGTG+TGG | - | chr6_1:26111612-26111631 | Msa0880050:intron | 55.0% | |
| ATGTGGATAGACACCAGGGC+TGG | + | chr6_1:26111832-26111851 | None:intergenic | 55.0% | |
| ! | TGGCTTTGCCCCCAACATTC+AGG | - | chr6_1:26111995-26112014 | Msa0880050:intron | 55.0% |
| TCTGAGCGGGGAGATTGGTA+TGG | + | chr6_1:26112291-26112310 | None:intergenic | 55.0% | |
| AGACTTCTGAGCGGGGAGAT+TGG | + | chr6_1:26112296-26112315 | None:intergenic | 55.0% | |
| TCTGTGAGCCGTCGTTGTTC+TGG | + | chr6_1:26112802-26112821 | None:intergenic | 55.0% | |
| CATAGTGCTCCCAGTCATCC+TGG | + | chr6_1:26112907-26112926 | None:intergenic | 55.0% | |
| ! | GACACCCCATCCAGCCTTTT+TGG | + | chr6_1:26113292-26113311 | None:intergenic | 55.0% |
| GTGTCATGACCAGCCACAGA+AGG | - | chr6_1:26113307-26113326 | Msa0880050:intron | 55.0% | |
| ! | TTAAGACCGGAGCACCTTGC+AGG | - | chr6_1:26113601-26113620 | Msa0880050:intron | 55.0% |
| GCGTCTTGCCAAGTACAACC+AGG | - | chr6_1:26113629-26113648 | Msa0880050:intron | 55.0% | |
| ! | GGTGCTGAAGCAGTGTATGC+TGG | - | chr6_1:26113771-26113790 | Msa0880050:CDS | 55.0% |
| AGTATGGCTCGACAGGGGTA+CGG | + | chr6_1:26113806-26113825 | None:intergenic | 55.0% | |
| ! | GATCTGACGGGCCTTGATGG+AGG | + | chr6_1:26109308-26109327 | None:intergenic | 60.0% |
| TCGTGGCAATCCTACCGTCG+AGG | - | chr6_1:26109336-26109355 | Msa0880050:three_prime_UTR | 60.0% | |
| TCACGTTGGCAACAGCCTGC+AGG | + | chr6_1:26110529-26110548 | None:intergenic | 60.0% | |
| AGTCTCCTTTGTGCCAGCCC+TGG | - | chr6_1:26111816-26111835 | Msa0880050:intron | 60.0% | |
| ! | AGACACCAGGGCTGGCACAA+AGG | + | chr6_1:26111824-26111843 | None:intergenic | 60.0% |
| ! | CTCTGACCTGCAAGGTGCTC+CGG | + | chr6_1:26113610-26113629 | None:intergenic | 60.0% |
| GCAAGACGCTCTGACCTGCA+AGG | + | chr6_1:26113618-26113637 | None:intergenic | 60.0% | |
| GGGGCTGACAAGTTATCCCC+TGG | - | chr6_1:26113990-26114009 | Msa0880050:intron | 60.0% | |
| ! | ACTCCACCGGTTGCTTGGGT+TGG | - | chr6_1:26114196-26114215 | Msa0880050:CDS | 60.0% |
| TAGCCAACCCAAGCAACCGG+TGG | + | chr6_1:26114202-26114221 | None:intergenic | 60.0% | |
| ACCATCTACCACCGAGCCTC+AGG | - | chr6_1:26114270-26114289 | Msa0880050:intron | 60.0% | |
| !! | ACCTGAGGCTCGGTGGTAGA+TGG | + | chr6_1:26114274-26114293 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 26109153 | 26114542 | 26109153 | ID=Msa0880050;Name=Msa0880050 |
| chr6_1 | mRNA | 26109153 | 26114542 | 26109153 | ID=Msa0880050-mRNA-1;Parent=Msa0880050;Name=Msa0880050-mRNA-1;_AED=0.14;_eAED=0.14;_QI=139|1|1|1|1|1|16|715|444 |
| chr6_1 | exon | 26109153 | 26109948 | 26109153 | ID=Msa0880050-mRNA-1:exon:6399;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26110045 | 26110101 | 26110045 | ID=Msa0880050-mRNA-1:exon:6398;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26110198 | 26110249 | 26110198 | ID=Msa0880050-mRNA-1:exon:6397;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26110367 | 26110455 | 26110367 | ID=Msa0880050-mRNA-1:exon:6396;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26110557 | 26110607 | 26110557 | ID=Msa0880050-mRNA-1:exon:6395;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26110698 | 26110892 | 26110698 | ID=Msa0880050-mRNA-1:exon:6394;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26111440 | 26111517 | 26111440 | ID=Msa0880050-mRNA-1:exon:6393;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26111616 | 26111753 | 26111616 | ID=Msa0880050-mRNA-1:exon:6392;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26112041 | 26112121 | 26112041 | ID=Msa0880050-mRNA-1:exon:6391;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26112207 | 26112308 | 26112207 | ID=Msa0880050-mRNA-1:exon:6390;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26112671 | 26112751 | 26112671 | ID=Msa0880050-mRNA-1:exon:6389;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26112848 | 26112934 | 26112848 | ID=Msa0880050-mRNA-1:exon:6388;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26113115 | 26113162 | 26113115 | ID=Msa0880050-mRNA-1:exon:6387;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26113729 | 26113793 | 26113729 | ID=Msa0880050-mRNA-1:exon:6386;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26114154 | 26114217 | 26114154 | ID=Msa0880050-mRNA-1:exon:6385;Parent=Msa0880050-mRNA-1 |
| chr6_1 | exon | 26114338 | 26114542 | 26114338 | ID=Msa0880050-mRNA-1:exon:6384;Parent=Msa0880050-mRNA-1 |
| chr6_1 | five_prime_UTR | 26114404 | 26114542 | 26114404 | ID=Msa0880050-mRNA-1:five_prime_utr;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26114338 | 26114403 | 26114338 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26114154 | 26114217 | 26114154 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26113729 | 26113793 | 26113729 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26113115 | 26113162 | 26113115 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26112848 | 26112934 | 26112848 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26112671 | 26112751 | 26112671 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26112207 | 26112308 | 26112207 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26112041 | 26112121 | 26112041 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26111616 | 26111753 | 26111616 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26111440 | 26111517 | 26111440 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26110698 | 26110892 | 26110698 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26110557 | 26110607 | 26110557 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26110367 | 26110455 | 26110367 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26110198 | 26110249 | 26110198 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26110045 | 26110101 | 26110045 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | CDS | 26109868 | 26109948 | 26109868 | ID=Msa0880050-mRNA-1:cds;Parent=Msa0880050-mRNA-1 |
| chr6_1 | three_prime_UTR | 26109153 | 26109867 | 26109153 | ID=Msa0880050-mRNA-1:three_prime_utr;Parent=Msa0880050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
