Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061250 | XP_013466553.1 | 93.758 | 753 | 8 | 2 | 1 | 734 | 1 | 733 | 0.0 | 1417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061250 | sp|Q9ZU97|VAC14_ARATH | 72.201 | 777 | 139 | 8 | 1 | 734 | 1 | 743 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061250 | A0A072VR25 | 93.758 | 753 | 8 | 2 | 1 | 734 | 1 | 733 | 0.0 | 1417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061250 | Msa0152280 | 0.835035 | 2.120547e-56 | -8.615850e-47 |
| Msa0061250 | Msa0191890 | 0.803819 | 2.905298e-49 | -8.615850e-47 |
| Msa0061250 | Msa0220730 | 0.802665 | 5.038106e-49 | -8.615850e-47 |
| Msa0061250 | Msa0244880 | 0.823866 | 1.099827e-53 | -8.615850e-47 |
| Msa0061250 | Msa0283470 | 0.808906 | 2.459686e-50 | -8.615850e-47 |
| Msa0061250 | Msa0661320 | 0.800071 | 1.711404e-48 | -8.615850e-47 |
| Msa0061250 | Msa0868160 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0061250 | Msa1401270 | 0.803152 | 3.995434e-49 | -8.615850e-47 |
| Msa0061250 | Msa1435080 | 0.800516 | 1.389339e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061250 | MtrunA17_Chr1g0161241 | 93.758 | 753 | 8 | 2 | 1 | 734 | 1 | 733 | 0.0 | 1417 |
| Msa0061250 | MtrunA17_Chr8g0391721 | 79.200 | 750 | 108 | 4 | 1 | 729 | 1 | 723 | 0.0 | 1164 |
| Msa0061250 | MtrunA17_Chr1g0161971 | 95.763 | 118 | 5 | 0 | 257 | 374 | 1 | 118 | 7.80e-72 | 229 |
| Msa0061250 | MtrunA17_Chr1g0161961 | 91.803 | 61 | 5 | 0 | 374 | 434 | 34 | 94 | 1.27e-30 | 117 |
| Msa0061250 | MtrunA17_Chr1g0161961 | 97.143 | 35 | 1 | 0 | 595 | 629 | 97 | 131 | 7.68e-16 | 75.1 |
| Msa0061250 | MtrunA17_Chr1g0161981 | 95.000 | 40 | 2 | 0 | 184 | 223 | 24 | 63 | 1.81e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061250 | AT2G01690.1 | 72.201 | 777 | 139 | 8 | 1 | 734 | 1 | 743 | 0.0 | 1083 |
| Msa0061250 | AT2G01690.2 | 72.108 | 778 | 139 | 9 | 1 | 734 | 1 | 744 | 0.0 | 1078 |
Find 173 sgRNAs with CRISPR-Local
Find 626 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAAAGTTTCTTATGATTT+AGG | 0.088625 | 1_2:+19269903 | Msa0061250:three_prime_UTR |
| TCGATCCTGCAAGATATTTA+TGG | 0.136387 | 1_2:+19268536 | Msa0061250:CDS |
| CAATACGATGTCTGTTTAAC+AGG | 0.212869 | 1_2:-19265224 | None:intergenic |
| CCATACTATGCTGACATTCT+TGG | 0.222445 | 1_2:+19264673 | Msa0061250:CDS |
| CAGACTAGATAATTCTCTTT+TGG | 0.230548 | 1_2:+19266404 | Msa0061250:CDS |
| GTGAAATTGTAGTTGAAATT+TGG | 0.233119 | 1_2:-19260038 | None:intergenic |
| GTAAAGTTTCTTATGATTTA+GGG | 0.245699 | 1_2:+19269904 | Msa0061250:three_prime_UTR |
| GGATAAATTGATTCGCTTGC+TGG | 0.254134 | 1_2:+19268280 | Msa0061250:CDS |
| TGAAAATCAGATCTAGAAAT+TGG | 0.260872 | 1_2:-19260087 | None:intergenic |
| GGATGGTGAATATTGGGTTT+TGG | 0.274248 | 1_2:+19269759 | Msa0061250:three_prime_UTR |
| AGGTTGGGATGGTGAATATT+GGG | 0.285559 | 1_2:+19269753 | Msa0061250:three_prime_UTR |
| TGGTCGAATGGCTGAAATTC+TGG | 0.300744 | 1_2:+19264413 | Msa0061250:CDS |
| TCAAGATCAAGGAGAAATTC+AGG | 0.304942 | 1_2:+19269600 | Msa0061250:CDS |
| ATAGTACACTCGATATAAAA+TGG | 0.308678 | 1_2:-19269987 | None:intergenic |
| AAGATAATTAATAATAATTA+CGG | 0.318532 | 1_2:-19259979 | None:intergenic |
| CTTTGCTTATCTTAGATTGC+AGG | 0.327847 | 1_2:+19268313 | Msa0061250:CDS |
| TTAGCATTATTTCTATCTTT+CGG | 0.329947 | 1_2:-19269952 | None:intergenic |
| GAGGTTGGGATGGTGAATAT+TGG | 0.341096 | 1_2:+19269752 | Msa0061250:three_prime_UTR |
| CAAGAGATCCTCAGCACTTC+CGG | 0.342233 | 1_2:+19266352 | Msa0061250:CDS |
| GATTGCTCGTAGCTCTTCAT+TGG | 0.342489 | 1_2:-19264902 | None:intergenic |
| ATCAGATATGCAAGGCAAAA+TGG | 0.345788 | 1_2:-19264698 | None:intergenic |
| ATTAGAAGGAGAATCTGATT+TGG | 0.355199 | 1_2:+19266601 | Msa0061250:CDS |
| GGGTGTCAAATATGTCATTT+AGG | 0.356610 | 1_2:-19265656 | None:intergenic |
| AACTGAATAGAGAGCCTTCT+GGG | 0.361056 | 1_2:+19268908 | Msa0061250:CDS |
| TGCGGATTTCGTTTCGAGAA+TGG | 0.362332 | 1_2:-19260157 | None:intergenic |
| CAGGCATCTGAGGAAGAAAT+TGG | 0.364245 | 1_2:-19268939 | None:intergenic |
| GGCTTATTTGTAAGGTTGCT+CGG | 0.366594 | 1_2:+19264875 | Msa0061250:intron |
| AAACCCAGCATATCAATATC+TGG | 0.373803 | 1_2:-19263860 | None:intergenic |
| AATAGCCATAAATATCTTGC+AGG | 0.379710 | 1_2:-19268541 | None:intergenic |
| TCAGATCTAGAAATTGGAAT+TGG | 0.380790 | 1_2:-19260081 | None:intergenic |
| CCAAGAATGTCAGCATAGTA+TGG | 0.383598 | 1_2:-19264673 | None:intergenic |
| TGAAATCCTTGTGGGCTAGA+TGG | 0.384041 | 1_2:+19269868 | Msa0061250:three_prime_UTR |
| GAACTTTCTACAATATTAGA+AGG | 0.384394 | 1_2:+19266587 | Msa0061250:CDS |
| GGTAGGATGGATTACTGTAT+TGG | 0.385066 | 1_2:+19263829 | Msa0061250:CDS |
| CACTCACCATCAAGAAAATC+AGG | 0.388028 | 1_2:-19263887 | None:intergenic |
| AATAACGAACTCTGCTATCT+TGG | 0.393017 | 1_2:-19263187 | None:intergenic |
| TTGGAATCAAGATGAAGCTT+GGG | 0.401994 | 1_2:+19269778 | Msa0061250:three_prime_UTR |
| TTCATGCGCTCCCTCAATAA+TGG | 0.402107 | 1_2:-19263776 | None:intergenic |
| CAACTGAATAGAGAGCCTTC+TGG | 0.404102 | 1_2:+19268907 | Msa0061250:CDS |
| CTCTTGAAGTCTGTAGATTA+TGG | 0.410233 | 1_2:+19264393 | Msa0061250:CDS |
| ATATTTCTTTGTATGCCTCT+TGG | 0.412645 | 1_2:+19267949 | Msa0061250:CDS |
| AGAGCATCCGCCATTGAAAC+AGG | 0.413598 | 1_2:-19260267 | None:intergenic |
| TGGCTATTCAAAGCATTGTA+TGG | 0.417465 | 1_2:+19268556 | Msa0061250:CDS |
| AAAGCTTATCGGCGAGGTTA+CGG | 0.418298 | 1_2:-19260314 | None:intergenic |
| TGTTCCAGATATTGATATGC+TGG | 0.422720 | 1_2:+19263856 | Msa0061250:CDS |
| CAACTACAATTTCACACAAA+CGG | 0.424202 | 1_2:+19260046 | Msa0061250:five_prime_UTR |
| CTGATTTCAACCTGTTTCAA+TGG | 0.424226 | 1_2:+19260257 | Msa0061250:exon |
| GTGAAGCAGCTTGCTTCTGC+TGG | 0.425659 | 1_2:+19260462 | Msa0061250:CDS |
| TGACCGAAAGTGATCAGTTC+AGG | 0.428919 | 1_2:+19263602 | Msa0061250:CDS |
| CGCAATGTTTCGTTTCGAGC+AGG | 0.430884 | 1_2:+19260176 | Msa0061250:five_prime_UTR |
| GAATTTCTCCTTGATCTTGA+AGG | 0.431307 | 1_2:-19269597 | None:intergenic |
| AACTTTGAATGGGGTCGGTC+GGG | 0.432159 | 1_2:+19269684 | Msa0061250:three_prime_UTR |
| AAGTCTCTGCTTTGTAGCTC+AGG | 0.434052 | 1_2:+19267995 | Msa0061250:CDS |
| AAGAATTTATACCATTATTG+AGG | 0.438037 | 1_2:+19263765 | Msa0061250:CDS |
| GTTAACCTAGTAAATTCATC+TGG | 0.441009 | 1_2:-19264453 | None:intergenic |
| CTAATATTGTAGAAAGTTCA+CGG | 0.449070 | 1_2:-19266583 | None:intergenic |
| GCACCTGAACTGATCACTTT+CGG | 0.449959 | 1_2:-19263605 | None:intergenic |
| AGTTTAGCTGCTGCTACCGT+TGG | 0.459371 | 1_2:+19260864 | Msa0061250:CDS |
| CAGTGCATATGAACTTTGAA+TGG | 0.464908 | 1_2:+19269673 | Msa0061250:three_prime_UTR |
| AGAATTTATACCATTATTGA+GGG | 0.465007 | 1_2:+19263766 | Msa0061250:CDS |
| GTTCTCCAGATGAATTTACT+AGG | 0.466712 | 1_2:+19264448 | Msa0061250:CDS |
| AATGAGTTTGTCAAACTTGG+TGG | 0.474926 | 1_2:+19264637 | Msa0061250:CDS |
| AGTGCATATGAACTTTGAAT+GGG | 0.474984 | 1_2:+19269674 | Msa0061250:three_prime_UTR |
| TAATGTTGTTTCTATCTATG+TGG | 0.475469 | 1_2:+19269642 | Msa0061250:three_prime_UTR |
| TCTTCTGATGTTGCTACCTC+AGG | 0.477620 | 1_2:+19268579 | Msa0061250:CDS |
| GTTTAGCTGCTGCTACCGTT+GGG | 0.481182 | 1_2:+19260865 | Msa0061250:CDS |
| GAAAATGCAGCAGCAACATC+GGG | 0.482689 | 1_2:+19269050 | Msa0061250:CDS |
| AAACTGAGGCTAGCAACCTT+TGG | 0.482938 | 1_2:-19269120 | None:intergenic |
| AATCTAAGATAAGCAAAGAT+TGG | 0.483573 | 1_2:-19268308 | None:intergenic |
| TGCATAAGGCATCAAAGATC+TGG | 0.484889 | 1_2:-19263358 | None:intergenic |
| AAGTGCTGTGATTCAATCTC+TGG | 0.486778 | 1_2:+19268220 | Msa0061250:CDS |
| CAGAGACTTATAATTGCCAT+TGG | 0.488893 | 1_2:-19267981 | None:intergenic |
| AGCGAATCAATTTATCCAGT+TGG | 0.488979 | 1_2:-19268274 | None:intergenic |
| ATAAATGAGTTTGTCAAACT+TGG | 0.493378 | 1_2:+19264634 | Msa0061250:CDS |
| TTTCTATCTTTCGGAGGCAT+AGG | 0.494223 | 1_2:-19269943 | None:intergenic |
| TTTCTTCCTCAGATGCCTGA+TGG | 0.494336 | 1_2:+19268943 | Msa0061250:CDS |
| GCTTATTTGTAAGGTTGCTC+GGG | 0.495026 | 1_2:+19264876 | Msa0061250:intron |
| GAAATCCTTGTGGGCTAGAT+GGG | 0.501775 | 1_2:+19269869 | Msa0061250:three_prime_UTR |
| ATCTGCAGAAAGCTTGCATA+AGG | 0.501879 | 1_2:-19263372 | None:intergenic |
| TTTCTGAGAAACTGTTGAGC+TGG | 0.508109 | 1_2:-19259934 | None:intergenic |
| TTAGGCAACTCTCTAGTGAA+TGG | 0.509895 | 1_2:+19265163 | Msa0061250:intron |
| ATCAAAAGCTTCAGCTGGAT+CGG | 0.510148 | 1_2:-19264929 | None:intergenic |
| CTCGAATCGAAGCTTTGCAT+TGG | 0.511173 | 1_2:+19265193 | Msa0061250:CDS |
| TTTGGAATCAAGATGAAGCT+TGG | 0.512873 | 1_2:+19269777 | Msa0061250:three_prime_UTR |
| CAATCACTGGTAAATCCTGC+CGG | 0.515153 | 1_2:+19267915 | Msa0061250:CDS |
| ATGTCCCTCCTTCAAGATCA+AGG | 0.516089 | 1_2:+19269589 | Msa0061250:CDS |
| TGTTGTGGAATTAGGTTGAG+GGG | 0.516711 | 1_2:+19260436 | Msa0061250:intron |
| AGGTTACGGAGCACGGCGGC+CGG | 0.518733 | 1_2:-19260300 | None:intergenic |
| GAACTTTGAATGGGGTCGGT+CGG | 0.519465 | 1_2:+19269683 | Msa0061250:three_prime_UTR |
| AGAAATATACAAATCCTTCC+CGG | 0.521247 | 1_2:-19267934 | None:intergenic |
| GTTCCAGATATTGATATGCT+GGG | 0.521529 | 1_2:+19263857 | Msa0061250:CDS |
| CTAGTCTGAAATTGTGCACA+AGG | 0.521586 | 1_2:-19266389 | None:intergenic |
| CTATCTTTCGGAGGCATAGG+AGG | 0.522475 | 1_2:-19269940 | None:intergenic |
| GAAATTCTGGTACAGAGGGC+TGG | 0.529861 | 1_2:+19264426 | Msa0061250:CDS |
| CCTACATCAAAAGCTTCAGC+TGG | 0.531054 | 1_2:-19264934 | None:intergenic |
| TAGGCAACTCTCTAGTGAAT+GGG | 0.531096 | 1_2:+19265164 | Msa0061250:intron |
| TTTGTCCACTACATTATCAA+AGG | 0.535218 | 1_2:+19269140 | Msa0061250:CDS |
| CAAGATCAAGGAGAAATTCA+GGG | 0.537258 | 1_2:+19269601 | Msa0061250:CDS |
| TTTATCCACTTCATTACCAA+AGG | 0.537290 | 1_2:+19269104 | Msa0061250:CDS |
| ATCGGCGAGGTTACGGAGCA+CGG | 0.537982 | 1_2:-19260307 | None:intergenic |
| GATTCAATCTCTGGAGGAGG+AGG | 0.539665 | 1_2:+19268229 | Msa0061250:CDS |
| TTGTTGTGGAATTAGGTTGA+GGG | 0.541578 | 1_2:+19260435 | Msa0061250:intron |
| TTCTCCTTGATCTTGAAGGA+GGG | 0.541578 | 1_2:-19269593 | None:intergenic |
| TTTCTCCTTGATCTTGAAGG+AGG | 0.541709 | 1_2:-19269594 | None:intergenic |
| GGCTGAAATTCTGGTACAGA+GGG | 0.547336 | 1_2:+19264422 | Msa0061250:CDS |
| TTTATTTATAGAGGTTGGGA+TGG | 0.549584 | 1_2:+19269742 | Msa0061250:three_prime_UTR |
| TTTGTTCCATCAGGCATCTG+AGG | 0.550164 | 1_2:-19268949 | None:intergenic |
| CTCTTGGTGTCATTCTCCAA+TGG | 0.560351 | 1_2:+19267965 | Msa0061250:CDS |
| CTAGGTTAACAGCTATCACA+TGG | 0.560734 | 1_2:+19264466 | Msa0061250:CDS |
| ATATACAAATCCTTCCCGGC+AGG | 0.561385 | 1_2:-19267930 | None:intergenic |
| AGAAAATGCAGCAGCAACAT+CGG | 0.563908 | 1_2:+19269049 | Msa0061250:CDS |
| GATGGTGATGCAACTGAAGA+TGG | 0.565704 | 1_2:+19268976 | Msa0061250:CDS |
| GGTGAAATTACCTCATCAGA+TGG | 0.567136 | 1_2:-19265699 | None:intergenic |
| TAAAGAAGAGAAAATTAGAG+TGG | 0.570631 | 1_2:+19264720 | Msa0061250:CDS |
| GTTAAACAGACATCGTATTG+AGG | 0.572840 | 1_2:+19265227 | Msa0061250:CDS |
| ACTGTTGAGCTGGAAAATAG+AGG | 0.573177 | 1_2:-19259924 | None:intergenic |
| AAGTTCACGGTAGACTCTCT+CGG | 0.573576 | 1_2:-19266570 | None:intergenic |
| AGCAACCTTTGGTAATGAAG+TGG | 0.573593 | 1_2:-19269109 | None:intergenic |
| ACGAACTCTGCTATCTTGGT+CGG | 0.573813 | 1_2:-19263183 | None:intergenic |
| CAAGGAAAACGACAAGATGC+CGG | 0.577859 | 1_2:-19266371 | None:intergenic |
| ATTTCAACCTGTTTCAATGG+CGG | 0.580914 | 1_2:+19260260 | Msa0061250:exon |
| GATGCCTGATGGAACAAAAG+AGG | 0.583988 | 1_2:+19268954 | Msa0061250:CDS |
| CTGGAAAATAGAGGAAATCA+CGG | 0.584284 | 1_2:-19259915 | None:intergenic |
| TGTGATTCAATCTCTGGAGG+AGG | 0.585756 | 1_2:+19268226 | Msa0061250:CDS |
| ACTGGTAAATCCTGCCGGGA+AGG | 0.587571 | 1_2:+19267920 | Msa0061250:CDS |
| TGGAATCAAGATGAAGCTTG+GGG | 0.588271 | 1_2:+19269779 | Msa0061250:three_prime_UTR |
| GAGCATCACGTTCTTCTACA+AGG | 0.590591 | 1_2:-19269824 | None:intergenic |
| AATCACTGGTAAATCCTGCC+GGG | 0.591032 | 1_2:+19267916 | Msa0061250:CDS |
| AAAACTACACCTCCTTGCAA+TGG | 0.592191 | 1_2:-19264968 | None:intergenic |
| TGGCTGAAATTCTGGTACAG+AGG | 0.592454 | 1_2:+19264421 | Msa0061250:CDS |
| GTCTGTAGATTATGGTCGAA+TGG | 0.594824 | 1_2:+19264401 | Msa0061250:CDS |
| GGATGCTCTCACTGTCATGC+CGG | 0.600572 | 1_2:+19260281 | Msa0061250:CDS |
| ATATGAACTTTGAATGGGGT+CGG | 0.602899 | 1_2:+19269679 | Msa0061250:three_prime_UTR |
| GATCTGAAAGTGCTTTGAGT+AGG | 0.604366 | 1_2:-19265677 | None:intergenic |
| TGCTGTGATTCAATCTCTGG+AGG | 0.606142 | 1_2:+19268223 | Msa0061250:CDS |
| ATGTGCAGCACTTTGTACAT+TGG | 0.607908 | 1_2:-19263402 | None:intergenic |
| TATGCAGGAGGCACAACAAG+AGG | 0.609276 | 1_2:+19269533 | Msa0061250:intron |
| TCTTCTTTATCAGATATGCA+AGG | 0.610375 | 1_2:-19264706 | None:intergenic |
| CAGCATAGTATGGAACAAGC+TGG | 0.612362 | 1_2:-19264663 | None:intergenic |
| ATCTGAAAGTGCTTTGAGTA+GGG | 0.613711 | 1_2:-19265676 | None:intergenic |
| AGCACTATATAACATTGCTA+AGG | 0.614582 | 1_2:+19263220 | Msa0061250:CDS |
| GCATTATTTCTATCTTTCGG+AGG | 0.615467 | 1_2:-19269949 | None:intergenic |
| GAGCAATCCTCTCCATTGCA+AGG | 0.617500 | 1_2:+19264956 | Msa0061250:CDS |
| TCTCTTAGATCGACTCGTGA+AGG | 0.618562 | 1_2:+19263424 | Msa0061250:CDS |
| AATATCCCATCTAGCCCACA+AGG | 0.627127 | 1_2:-19269874 | None:intergenic |
| AGCAACCTTTGATAATGTAG+TGG | 0.629292 | 1_2:-19269145 | None:intergenic |
| AATTGGTAATAATCCCCAGA+AGG | 0.629567 | 1_2:-19268922 | None:intergenic |
| TACACCTCCTTGCAATGGAG+AGG | 0.635366 | 1_2:-19264963 | None:intergenic |
| ACAAGATGCCGGAAGTGCTG+AGG | 0.637595 | 1_2:-19266360 | None:intergenic |
| ACTTTCAGATCCATCTGATG+AGG | 0.638140 | 1_2:+19265689 | Msa0061250:CDS |
| AATACGATGTCTGTTTAACA+GGG | 0.645216 | 1_2:-19265223 | None:intergenic |
| AGAAGAACGTGATGCTCACG+TGG | 0.646393 | 1_2:+19269830 | Msa0061250:three_prime_UTR |
| GCAACTCTCTAGTGAATGGG+AGG | 0.647513 | 1_2:+19265167 | Msa0061250:CDS |
| TGAAGCTGCTCAGCATCTCG+AGG | 0.650953 | 1_2:+19260896 | Msa0061250:CDS |
| CTGCTCGAAACGAAACATTG+CGG | 0.651177 | 1_2:-19260175 | None:intergenic |
| GAATCACAGCACTTGCATGT+CGG | 0.655650 | 1_2:-19268211 | None:intergenic |
| ATAATGTAGTGGACAAACTG+AGG | 0.657167 | 1_2:-19269134 | None:intergenic |
| GTGATGCAACTGAAGATGGT+GGG | 0.660086 | 1_2:+19268980 | Msa0061250:CDS |
| GGTGATGCAACTGAAGATGG+TGG | 0.664040 | 1_2:+19268979 | Msa0061250:CDS |
| CATTGGAGAATGACACCAAG+AGG | 0.667584 | 1_2:-19267964 | None:intergenic |
| CCTGATGGAACAAAAGAGGA+TGG | 0.675641 | 1_2:+19268958 | Msa0061250:CDS |
| GAGAAAGAATTTAACACAGG+AGG | 0.675983 | 1_2:-19263161 | None:intergenic |
| GGAATCAAGATGAAGCTTGG+GGG | 0.676324 | 1_2:+19269780 | Msa0061250:three_prime_UTR |
| AGCTTCATTAGTCAACCCAA+CGG | 0.678054 | 1_2:-19260880 | None:intergenic |
| TCGGAGAAAGAATTTAACAC+AGG | 0.679939 | 1_2:-19263164 | None:intergenic |
| TTTCGTAAAGCTTATCGGCG+AGG | 0.680957 | 1_2:-19260320 | None:intergenic |
| ACTGAATAGAGAGCCTTCTG+GGG | 0.693100 | 1_2:+19268909 | Msa0061250:CDS |
| CGGCATTCAAAAGCACACAA+AGG | 0.693511 | 1_2:-19266550 | None:intergenic |
| GTGCATATGAACTTTGAATG+GGG | 0.701952 | 1_2:+19269675 | Msa0061250:three_prime_UTR |
| CAATCCTCTCCATTGCAAGG+AGG | 0.713214 | 1_2:+19264959 | Msa0061250:CDS |
| TAGGTTAACAGCTATCACAT+GGG | 0.732638 | 1_2:+19264467 | Msa0061250:CDS |
| GCACGATTGAAAGAATACGA+TGG | 0.736541 | 1_2:-19268883 | None:intergenic |
| GGCGAGGTTACGGAGCACGG+CGG | 0.770251 | 1_2:-19260304 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAATTTAAAATA+GGG | - | chr1_2:19266935-19266954 | None:intergenic | 0.0% |
| !!! | ATTTTTAAAAAATTTAAAAT+AGG | - | chr1_2:19266936-19266955 | None:intergenic | 0.0% |
| !!! | AAACTTATGTTTTTATATTT+TGG | + | chr1_2:19260756-19260775 | Msa0061250:intron | 10.0% |
| !! | AAAAAAATTACTTTAATCAT+AGG | - | chr1_2:19262141-19262160 | None:intergenic | 10.0% |
| !!! | TGAATTTTTTAATATCAAAT+AGG | + | chr1_2:19266293-19266312 | Msa0061250:intron | 10.0% |
| !!! | ATTTTTTAAAACATTAATGT+TGG | - | chr1_2:19266855-19266874 | None:intergenic | 10.0% |
| !!! | GAAAATCATAATATTTTTTA+GGG | + | chr1_2:19267176-19267195 | Msa0061250:intron | 10.0% |
| !! | TGATGAAATTTAATAAATAA+GGG | - | chr1_2:19267326-19267345 | None:intergenic | 10.0% |
| !! | TTGATGAAATTTAATAAATA+AGG | - | chr1_2:19267327-19267346 | None:intergenic | 10.0% |
| !! | AAATTTAATTACATAAATAG+GGG | - | chr1_2:19268169-19268188 | None:intergenic | 10.0% |
| !! | CAAATTTAATTACATAAATA+GGG | - | chr1_2:19268170-19268189 | None:intergenic | 10.0% |
| !!! | AGAATCATATTTTATAATTA+GGG | - | chr1_2:19268405-19268424 | None:intergenic | 10.0% |
| !!! | AAGAATCATATTTTATAATT+AGG | - | chr1_2:19268406-19268425 | None:intergenic | 10.0% |
| !! | ATTATAAAATATGATTCTTA+TGG | + | chr1_2:19268407-19268426 | Msa0061250:intron | 10.0% |
| !!! | AAATTTGAAGTTTCTTTTTT+AGG | - | chr1_2:19260009-19260028 | None:intergenic | 15.0% |
| !!! | AATGGAAATTTTGATTTTAT+TGG | - | chr1_2:19260142-19260161 | None:intergenic | 15.0% |
| !!! | ATTAATATGAAATTCGTTTT+CGG | - | chr1_2:19260209-19260228 | None:intergenic | 15.0% |
| !!! | ATTTTGGGTATTATTTAAAT+TGG | - | chr1_2:19260609-19260628 | None:intergenic | 15.0% |
| !!! | ATCATTTTCAAAATTAATCT+AGG | + | chr1_2:19261501-19261520 | Msa0061250:intron | 15.0% |
| !! | TTAAAGTTAAAAATTGTGTT+AGG | + | chr1_2:19261622-19261641 | Msa0061250:intron | 15.0% |
| !! | GATATTCTAATTCTAATATT+TGG | + | chr1_2:19262277-19262296 | Msa0061250:intron | 15.0% |
| !! | TAATCAAAAATCTATACATA+GGG | - | chr1_2:19265389-19265408 | None:intergenic | 15.0% |
| !! | ATAATCAAAAATCTATACAT+AGG | - | chr1_2:19265390-19265409 | None:intergenic | 15.0% |
| !!! | ATGTATAGATTTTTGATTAT+AGG | + | chr1_2:19265390-19265409 | Msa0061250:intron | 15.0% |
| !!! | TAAAATGAAGTTTTAATGAA+AGG | - | chr1_2:19266491-19266510 | None:intergenic | 15.0% |
| !!! | CATTTTATACAATTAAATCT+AGG | + | chr1_2:19266504-19266523 | Msa0061250:intron | 15.0% |
| !! | CAAACAAAAATATTATATTG+AGG | + | chr1_2:19267063-19267082 | Msa0061250:intron | 15.0% |
| !!! | GGAAAATCATAATATTTTTT+AGG | + | chr1_2:19267175-19267194 | Msa0061250:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr1_2:19267315-19267334 | None:intergenic | 15.0% |
| !! | CCAAATTTAATTACATAAAT+AGG | - | chr1_2:19268171-19268190 | None:intergenic | 15.0% |
| !! | CCTATTTATGTAATTAAATT+TGG | + | chr1_2:19268168-19268187 | Msa0061250:intron | 15.0% |
| !! | TTATTATAGTATTAGTTATG+TGG | + | chr1_2:19268442-19268461 | Msa0061250:intron | 15.0% |
| !!! | TATATATCTTTTTTTGAACA+AGG | - | chr1_2:19269321-19269340 | None:intergenic | 15.0% |
| !! | TTAGTTGATTGTTGAAAATT+TGG | + | chr1_2:19260397-19260416 | Msa0061250:intron | 20.0% |
| !!! | ATTTTGGTATTGTTGATTAT+TGG | + | chr1_2:19260772-19260791 | Msa0061250:intron | 20.0% |
| !!! | TGTGATTATTGTTATTGTAT+TGG | + | chr1_2:19260819-19260838 | Msa0061250:intron | 20.0% |
| !!! | AATTGATAGCTAACTTTTAA+GGG | - | chr1_2:19261430-19261449 | None:intergenic | 20.0% |
| !!! | TAATTGATAGCTAACTTTTA+AGG | - | chr1_2:19261431-19261450 | None:intergenic | 20.0% |
| !! | TTTCAAAATTAATCTAGGTA+CGG | + | chr1_2:19261506-19261525 | Msa0061250:intron | 20.0% |
| !!! | CTTATATTGTTTTCTACATT+CGG | - | chr1_2:19261961-19261980 | None:intergenic | 20.0% |
| !!! | AACAATATAAGAAAGTATCT+TGG | + | chr1_2:19261970-19261989 | Msa0061250:intron | 20.0% |
| !!! | GTTGAATAATTCACTTTTTA+TGG | + | chr1_2:19262035-19262054 | Msa0061250:intron | 20.0% |
| !! | TTTCCATTTAAACTTATATC+AGG | + | chr1_2:19262171-19262190 | Msa0061250:intron | 20.0% |
| !!! | TATCTGTTCACAATTAATTT+TGG | + | chr1_2:19262457-19262476 | Msa0061250:intron | 20.0% |
| !! | ACACAGAAAAATAATGTAAA+TGG | - | chr1_2:19262492-19262511 | None:intergenic | 20.0% |
| !! | GTCATTTACATTATTATTCT+GGG | + | chr1_2:19262641-19262660 | Msa0061250:intron | 20.0% |
| !! | ATAGATAATACTAAATGATG+TGG | - | chr1_2:19262946-19262965 | None:intergenic | 20.0% |
| !! | TTAATTAGCTAATCTCTATT+TGG | - | chr1_2:19263521-19263540 | None:intergenic | 20.0% |
| !! | TAATCAGTAGTTAATCTAAA+AGG | - | chr1_2:19263554-19263573 | None:intergenic | 20.0% |
| !! | AAGAATTTATACCATTATTG+AGG | + | chr1_2:19263765-19263784 | Msa0061250:CDS | 20.0% |
| !! | AGAATTTATACCATTATTGA+GGG | + | chr1_2:19263766-19263785 | Msa0061250:CDS | 20.0% |
| !!! | TTGATTTTGTACAAAAATGT+CGG | - | chr1_2:19263937-19263956 | None:intergenic | 20.0% |
| !! | TATATTAGAAGAAATCTTAC+TGG | - | chr1_2:19264085-19264104 | None:intergenic | 20.0% |
| !! | ATAGATAAAATCCTTAACAT+GGG | - | chr1_2:19264236-19264255 | None:intergenic | 20.0% |
| !! | AATAGATAAAATCCTTAACA+TGG | - | chr1_2:19264237-19264256 | None:intergenic | 20.0% |
| !!! | AAAGCAATAATAATTTTGAC+AGG | - | chr1_2:19264566-19264585 | None:intergenic | 20.0% |
| !! | TAAATTGTAAAAAGAAAGTG+GGG | - | chr1_2:19264761-19264780 | None:intergenic | 20.0% |
| !! | GTAAATTGTAAAAAGAAAGT+GGG | - | chr1_2:19264762-19264781 | None:intergenic | 20.0% |
| !! | AGTAAATTGTAAAAAGAAAG+TGG | - | chr1_2:19264763-19264782 | None:intergenic | 20.0% |
| !!! | AATGTGAAATAATTTGTTTC+TGG | + | chr1_2:19264854-19264873 | Msa0061250:intron | 20.0% |
| !!! | GAAAAAAATGATTTTTACAG+TGG | + | chr1_2:19265038-19265057 | Msa0061250:intron | 20.0% |
| !! | AAAAAAAATGGGATAAAAGA+AGG | - | chr1_2:19265730-19265749 | None:intergenic | 20.0% |
| !! | AAAATTGCAATTATTTGTCA+AGG | - | chr1_2:19265812-19265831 | None:intergenic | 20.0% |
| !! | TTAAACAATATAGCATACAA+GGG | - | chr1_2:19266227-19266246 | None:intergenic | 20.0% |
| !! | ATTAAACAATATAGCATACA+AGG | - | chr1_2:19266228-19266247 | None:intergenic | 20.0% |
| !! | TATGCTATATTGTTTAATTG+TGG | + | chr1_2:19266230-19266249 | Msa0061250:intron | 20.0% |
| !! | ACATAACTATTTCGATTAAT+GGG | + | chr1_2:19266745-19266764 | Msa0061250:intron | 20.0% |
| !!! | ATTATGGAGTACATATTTTT+TGG | + | chr1_2:19266875-19266894 | Msa0061250:intron | 20.0% |
| !! | TAAACAAAATAACTTTATGG+AGG | - | chr1_2:19266963-19266982 | None:intergenic | 20.0% |
| !! | TGGTAAACAAAATAACTTTA+TGG | - | chr1_2:19266966-19266985 | None:intergenic | 20.0% |
| !!! | TAAGGTCATTATGATATTTT+TGG | + | chr1_2:19267092-19267111 | Msa0061250:intron | 20.0% |
| !! | TAGATAATAGTGAAATGTAA+TGG | + | chr1_2:19267141-19267160 | Msa0061250:intron | 20.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | - | chr1_2:19267290-19267309 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | - | chr1_2:19267410-19267429 | None:intergenic | 20.0% |
| !! | TATCTTAAAAGTCTTACAAT+GGG | - | chr1_2:19269290-19269309 | None:intergenic | 20.0% |
| !! | TTATCTTAAAAGTCTTACAA+TGG | - | chr1_2:19269291-19269310 | None:intergenic | 20.0% |
| !! | AGTAAAGTTTCTTATGATTT+AGG | + | chr1_2:19269903-19269922 | Msa0061250:three_prime_UTR | 20.0% |
| !! | GTAAAGTTTCTTATGATTTA+GGG | + | chr1_2:19269904-19269923 | Msa0061250:three_prime_UTR | 20.0% |
| !!! | TTAGCATTATTTCTATCTTT+CGG | - | chr1_2:19269955-19269974 | None:intergenic | 20.0% |
| ! | GTGAAATTGTAGTTGAAATT+TGG | - | chr1_2:19260041-19260060 | None:intergenic | 25.0% |
| ! | TGAAAATCAGATCTAGAAAT+TGG | - | chr1_2:19260090-19260109 | None:intergenic | 25.0% |
| !! | TGAAAATTTGGTGAAATTTG+AGG | + | chr1_2:19260409-19260428 | Msa0061250:intron | 25.0% |
| !! | GAAAATTTGGTGAAATTTGA+GGG | + | chr1_2:19260410-19260429 | Msa0061250:intron | 25.0% |
| !! | AAAATGTCAGAGACTATTTT+GGG | - | chr1_2:19260624-19260643 | None:intergenic | 25.0% |
| !! | AGTTTCTTTGTTATAATGAG+TGG | + | chr1_2:19260656-19260675 | Msa0061250:intron | 25.0% |
| !! | GTTTCTTTGTTATAATGAGT+GGG | + | chr1_2:19260657-19260676 | Msa0061250:intron | 25.0% |
| !! | TTTCTTTGTTATAATGAGTG+GGG | + | chr1_2:19260658-19260677 | Msa0061250:intron | 25.0% |
| !! | TTATTGTATTGGTATGATGA+AGG | + | chr1_2:19260830-19260849 | Msa0061250:intron | 25.0% |
| !! | TATTGTATTGGTATGATGAA+GGG | + | chr1_2:19260831-19260850 | Msa0061250:intron | 25.0% |
| ! | AAGTTATGCAAAGTTTATCA+CGG | + | chr1_2:19261038-19261057 | Msa0061250:intron | 25.0% |
| ! | TATTTGTTTATGTGTATGTG+AGG | + | chr1_2:19261115-19261134 | Msa0061250:intron | 25.0% |
| ! | ATTTGTTTATGTGTATGTGA+GGG | + | chr1_2:19261116-19261135 | Msa0061250:intron | 25.0% |
| ! | CTTAAATAGCATTCTATGAA+GGG | + | chr1_2:19261195-19261214 | Msa0061250:intron | 25.0% |
| ! | TTCAAAATTAATCTAGGTAC+GGG | + | chr1_2:19261507-19261526 | Msa0061250:intron | 25.0% |
| ! | ATTATAAGATAAAGTGGGAA+GGG | - | chr1_2:19262012-19262031 | None:intergenic | 25.0% |
| ! | TTCCCACTTTATCTTATAAT+GGG | + | chr1_2:19262012-19262031 | Msa0061250:intron | 25.0% |
| ! | ATTCTACAAACACTAAAGAA+GGG | - | chr1_2:19262071-19262090 | None:intergenic | 25.0% |
| ! | AATTCTACAAACACTAAAGA+AGG | - | chr1_2:19262072-19262091 | None:intergenic | 25.0% |
| ! | AAGCCTGATATAAGTTTAAA+TGG | - | chr1_2:19262177-19262196 | None:intergenic | 25.0% |
| ! | TATTATTCTGTGTCAATATG+TGG | + | chr1_2:19262306-19262325 | Msa0061250:intron | 25.0% |
| ! | TTGTGAACAGATAATACTAA+TGG | - | chr1_2:19262450-19262469 | None:intergenic | 25.0% |
| ! | GAAAAATAATGTAAATGGCA+TGG | - | chr1_2:19262487-19262506 | None:intergenic | 25.0% |
| !! | ATCTGTTGCACTATTAATTT+TGG | + | chr1_2:19262610-19262629 | Msa0061250:intron | 25.0% |
| ! | GAATAATAATGTAAATGACG+TGG | - | chr1_2:19262640-19262659 | None:intergenic | 25.0% |
| ! | CGTCATTTACATTATTATTC+TGG | + | chr1_2:19262640-19262659 | Msa0061250:intron | 25.0% |
| !! | ATCTGTTGCACAATTAATTT+TGG | + | chr1_2:19262763-19262782 | Msa0061250:intron | 25.0% |
| ! | CAGTAATAATGAAAATTACG+TGG | - | chr1_2:19262793-19262812 | None:intergenic | 25.0% |
| !! | ATCTGTTGCACAATTAATTT+TGG | + | chr1_2:19262763-19262782 | Msa0061250:intron | 25.0% |
| ! | ATCTATTGCACAATTAATCT+TGG | + | chr1_2:19262960-19262979 | Msa0061250:intron | 25.0% |
| ! | AAAGATTATACTAAATGACG+TGG | - | chr1_2:19262990-19263009 | None:intergenic | 25.0% |
| ! | AATATCAAGAAATGAAAGCA+GGG | - | chr1_2:19263737-19263756 | None:intergenic | 25.0% |
| !! | TGATTTTGTACAAAAATGTC+GGG | - | chr1_2:19263936-19263955 | None:intergenic | 25.0% |
| ! | GGCATTTAAAAATGATTAGA+TGG | - | chr1_2:19263966-19263985 | None:intergenic | 25.0% |
| !!! | TAATCATTTTTAAATGCCTC+AGG | + | chr1_2:19263968-19263987 | Msa0061250:intron | 25.0% |
| ! | AAAAATGATAAAAGCAGAAC+TGG | - | chr1_2:19264155-19264174 | None:intergenic | 25.0% |
| ! | ATAAATGAGTTTGTCAAACT+TGG | + | chr1_2:19264634-19264653 | Msa0061250:CDS | 25.0% |
| ! | TAAAGAAGAGAAAATTAGAG+TGG | + | chr1_2:19264720-19264739 | Msa0061250:CDS | 25.0% |
| ! | AAATTGTAAAAAGAAAGTGG+GGG | - | chr1_2:19264760-19264779 | None:intergenic | 25.0% |
| ! | CTATAGTTGGTTAAACAAAA+GGG | - | chr1_2:19265103-19265122 | None:intergenic | 25.0% |
| ! | ACTATAGTTGGTTAAACAAA+AGG | - | chr1_2:19265104-19265123 | None:intergenic | 25.0% |
| !!! | TCTTCTGTTTTGATACATTA+AGG | + | chr1_2:19265267-19265286 | Msa0061250:intron | 25.0% |
| ! | GGATTGAAAAACATACAATT+TGG | + | chr1_2:19265473-19265492 | Msa0061250:intron | 25.0% |
| ! | GAGAAAGTCAAAGAATAAAT+TGG | - | chr1_2:19265502-19265521 | None:intergenic | 25.0% |
| ! | TTTACATTCCATATATCCAT+TGG | + | chr1_2:19265585-19265604 | Msa0061250:intron | 25.0% |
| ! | AATAATTGCAATACCGAATA+TGG | + | chr1_2:19265904-19265923 | Msa0061250:intron | 25.0% |
| !!! | ATTTTTCTTTAAAGCCACAT+TGG | + | chr1_2:19266015-19266034 | Msa0061250:intron | 25.0% |
| ! | TAAGAAGTCATTCCTAATAT+GGG | - | chr1_2:19266047-19266066 | None:intergenic | 25.0% |
| ! | AATTCATGTGAATAATTTCC+AGG | - | chr1_2:19266259-19266278 | None:intergenic | 25.0% |
| ! | CTAATATTGTAGAAAGTTCA+CGG | - | chr1_2:19266586-19266605 | None:intergenic | 25.0% |
| ! | GAACTTTCTACAATATTAGA+AGG | + | chr1_2:19266587-19266606 | Msa0061250:CDS | 25.0% |
| !! | TTTGGATTTTGCATCAATTA+TGG | + | chr1_2:19266619-19266638 | Msa0061250:CDS | 25.0% |
| ! | TAATAATATGCTGTGTTATG+TGG | + | chr1_2:19266714-19266733 | Msa0061250:intron | 25.0% |
| ! | GACATAACTATTTCGATTAA+TGG | + | chr1_2:19266744-19266763 | Msa0061250:intron | 25.0% |
| !! | GGAAAATAGCAAAATTTTGA+GGG | - | chr1_2:19266902-19266921 | None:intergenic | 25.0% |
| !!! | ATTATATTGAGGACTTGTTA+AGG | + | chr1_2:19267074-19267093 | Msa0061250:intron | 25.0% |
| !! | AGCACCATTAATTATGTTTT+CGG | - | chr1_2:19267121-19267140 | None:intergenic | 25.0% |
| ! | ATAATAGTGAAATGTAATGG+AGG | + | chr1_2:19267144-19267163 | Msa0061250:intron | 25.0% |
| ! | AAGAGACTATTATTATGAGA+CGG | - | chr1_2:19267224-19267243 | None:intergenic | 25.0% |
| ! | CCTTATTAATTGTAGTTAGT+GGG | - | chr1_2:19267360-19267379 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr1_2:19267358-19267377 | Msa0061250:intron | 25.0% |
| !! | CTCTAAATTATTGTCGTTTA+AGG | - | chr1_2:19267458-19267477 | None:intergenic | 25.0% |
| ! | AAACGACAATAATTTAGAGA+CGG | + | chr1_2:19267459-19267478 | Msa0061250:intron | 25.0% |
| ! | AAACTTAAATTGTACTTCGA+TGG | + | chr1_2:19267496-19267515 | Msa0061250:intron | 25.0% |
| ! | CAAAAAGATAATATTGCCAA+TGG | - | chr1_2:19267710-19267729 | None:intergenic | 25.0% |
| ! | GGTATATATCATCTATAACT+TGG | + | chr1_2:19268016-19268035 | Msa0061250:intron | 25.0% |
| !!! | AGTAATCAATTTTTTTTCCG+TGG | + | chr1_2:19268112-19268131 | Msa0061250:intron | 25.0% |
| !! | GGATATAAATGTGAAGTTTT+TGG | + | chr1_2:19268250-19268269 | Msa0061250:CDS | 25.0% |
| !! | AATCTAAGATAAGCAAAGAT+TGG | - | chr1_2:19268311-19268330 | None:intergenic | 25.0% |
| ! | CATGCACATTGAATTAAAAA+TGG | - | chr1_2:19268356-19268375 | None:intergenic | 25.0% |
| !! | ATTTTATAATTAGGGACGAA+TGG | - | chr1_2:19268397-19268416 | None:intergenic | 25.0% |
| !!! | TATTTTTTAAACTTCAGTGC+TGG | + | chr1_2:19268683-19268702 | Msa0061250:intron | 25.0% |
| !!! | ACGAGTTTTTAGTATCTTAA+AGG | - | chr1_2:19268851-19268870 | None:intergenic | 25.0% |
| !!! | TAATGTTGTTTCTATCTATG+TGG | + | chr1_2:19269642-19269661 | Msa0061250:three_prime_UTR | 25.0% |
| !!! | TCGTTTTATTTATAGAGGTT+GGG | + | chr1_2:19269738-19269757 | Msa0061250:three_prime_UTR | 25.0% |
| !!! | TATTTTTGTTGAAATCCTTG+TGG | + | chr1_2:19269859-19269878 | Msa0061250:three_prime_UTR | 25.0% |
| !! | ATTTTTGTTGAAATCCTTGT+GGG | + | chr1_2:19269860-19269879 | Msa0061250:three_prime_UTR | 25.0% |
| CAACTACAATTTCACACAAA+CGG | + | chr1_2:19260046-19260065 | Msa0061250:five_prime_UTR | 30.0% | |
| TCAGATCTAGAAATTGGAAT+TGG | - | chr1_2:19260084-19260103 | None:intergenic | 30.0% | |
| ! | TTTTATTGGAATTGCGATTC+AGG | - | chr1_2:19260128-19260147 | None:intergenic | 30.0% |
| ! | GAATTATCACAATTTTACCG+CGG | + | chr1_2:19260582-19260601 | Msa0061250:intron | 30.0% |
| GTATTATTTAAATTGGACCG+CGG | - | chr1_2:19260602-19260621 | None:intergenic | 30.0% | |
| ! | GAAAATGTCAGAGACTATTT+TGG | - | chr1_2:19260625-19260644 | None:intergenic | 30.0% |
| AGTTATGCAAAGTTTATCAC+GGG | + | chr1_2:19261039-19261058 | Msa0061250:intron | 30.0% | |
| CGAAATTAGAATCTTCATAG+TGG | + | chr1_2:19261069-19261088 | Msa0061250:intron | 30.0% | |
| GCTTAAATAGCATTCTATGA+AGG | + | chr1_2:19261194-19261213 | Msa0061250:intron | 30.0% | |
| CGTATAGTAATTAAGTAGCT+GGG | - | chr1_2:19261228-19261247 | None:intergenic | 30.0% | |
| TCGTATAGTAATTAAGTAGC+TGG | - | chr1_2:19261229-19261248 | None:intergenic | 30.0% | |
| TATTCTGCAAGTGATTCATT+TGG | + | chr1_2:19261343-19261362 | Msa0061250:intron | 30.0% | |
| TCATCAATTGATATCAGAGA+GGG | - | chr1_2:19261383-19261402 | None:intergenic | 30.0% | |
| TCAACAGAGATAGGTATAAT+GGG | - | chr1_2:19261900-19261919 | None:intergenic | 30.0% | |
| ATTATACCTATCTCTGTTGA+GGG | + | chr1_2:19261900-19261919 | Msa0061250:intron | 30.0% | |
| CATTATAAGATAAAGTGGGA+AGG | - | chr1_2:19262013-19262032 | None:intergenic | 30.0% | |
| CTTCCCACTTTATCTTATAA+TGG | + | chr1_2:19262011-19262030 | Msa0061250:intron | 30.0% | |
| TCCCACTTTATCTTATAATG+GGG | + | chr1_2:19262013-19262032 | Msa0061250:intron | 30.0% | |
| ACCCCATTATAAGATAAAGT+GGG | - | chr1_2:19262017-19262036 | None:intergenic | 30.0% | |
| AACCCCATTATAAGATAAAG+TGG | - | chr1_2:19262018-19262037 | None:intergenic | 30.0% | |
| TATGTTCTTACTCAATAGGA+GGG | - | chr1_2:19262107-19262126 | None:intergenic | 30.0% | |
| ACACTATGTTCTTACTCAAT+AGG | - | chr1_2:19262111-19262130 | None:intergenic | 30.0% | |
| CTATATAGCACGATAAATTC+TGG | + | chr1_2:19262373-19262392 | Msa0061250:intron | 30.0% | |
| AACAGATAATACTAATGGCA+TGG | - | chr1_2:19262445-19262464 | None:intergenic | 30.0% | |
| ! | TATTTTTCTGTGTCAATGTG+TGG | + | chr1_2:19262499-19262518 | Msa0061250:intron | 30.0% |
| ! | CTATATAGCTCGAGAAATTT+TGG | + | chr1_2:19262566-19262585 | Msa0061250:intron | 30.0% |
| ACAGATAATACTAAATGACG+TGG | - | chr1_2:19262596-19262615 | None:intergenic | 30.0% | |
| ACAGATAATACTAAATGACG+TGG | - | chr1_2:19262596-19262615 | None:intergenic | 30.0% | |
| TTTGCATTGTCTATTTAGCA+TGG | + | chr1_2:19262862-19262881 | Msa0061250:intron | 30.0% | |
| TTGCATTGTCTATTTAGCAT+GGG | + | chr1_2:19262863-19262882 | Msa0061250:intron | 30.0% | |
| ! | CTATTTAGCATGGGAAATTT+TGG | + | chr1_2:19262872-19262891 | Msa0061250:intron | 30.0% |
| AGCACTATATAACATTGCTA+AGG | + | chr1_2:19263220-19263239 | Msa0061250:CDS | 30.0% | |
| TATATAACATTGCTAAGGTG+AGG | + | chr1_2:19263225-19263244 | Msa0061250:intron | 30.0% | |
| CAACAAAACACAATTCACAT+TGG | - | chr1_2:19263302-19263321 | None:intergenic | 30.0% | |
| ! | ACACTCTAATCTTTTAACAC+AGG | + | chr1_2:19263573-19263592 | Msa0061250:intron | 30.0% |
| GAAGCAGTATAAGTTACATT+AGG | - | chr1_2:19263708-19263727 | None:intergenic | 30.0% | |
| ATATCAAGAAATGAAAGCAG+GGG | - | chr1_2:19263736-19263755 | None:intergenic | 30.0% | |
| GAATATCAAGAAATGAAAGC+AGG | - | chr1_2:19263738-19263757 | None:intergenic | 30.0% | |
| ! | TTTCTTCCTGATTTTCTTGA+TGG | + | chr1_2:19263881-19263900 | Msa0061250:CDS | 30.0% |
| CAACATATTAAACAAACCTG+AGG | - | chr1_2:19263987-19264006 | None:intergenic | 30.0% | |
| ! | TGTTTGAGTAGCAATTCTTT+TGG | + | chr1_2:19264116-19264135 | Msa0061250:intron | 30.0% |
| !!! | CAATTCTTTTGGAATTCTTC+AGG | + | chr1_2:19264127-19264146 | Msa0061250:intron | 30.0% |
| GTTAACCTAGTAAATTCATC+TGG | - | chr1_2:19264456-19264475 | None:intergenic | 30.0% | |
| TCTTCTTTATCAGATATGCA+AGG | - | chr1_2:19264709-19264728 | None:intergenic | 30.0% | |
| AAGAGAAAATTAGAGTGGTA+GGG | + | chr1_2:19264725-19264744 | Msa0061250:intron | 30.0% | |
| ACACTAAAATATGGGACAAA+TGG | - | chr1_2:19264797-19264816 | None:intergenic | 30.0% | |
| !! | TTGTTTCTGGCTTATTTGTA+AGG | + | chr1_2:19264867-19264886 | Msa0061250:intron | 30.0% |
| ! | TTTTCGCAATCATTTTACAG+TGG | - | chr1_2:19265079-19265098 | None:intergenic | 30.0% |
| AATACGATGTCTGTTTAACA+GGG | - | chr1_2:19265226-19265245 | None:intergenic | 30.0% | |
| CAATTTACTGTTTGATCATG+AGG | + | chr1_2:19265452-19265471 | Msa0061250:intron | 30.0% | |
| CATTATCACCAATGGATATA+TGG | - | chr1_2:19265596-19265615 | None:intergenic | 30.0% | |
| !! | ATGGGATAAAAGAAGGTATT+AGG | - | chr1_2:19265723-19265742 | None:intergenic | 30.0% |
| GGTATTGCAATTATTTGTCA+AGG | - | chr1_2:19265899-19265918 | None:intergenic | 30.0% | |
| ! | AAGAACAAGTTGAAATCCTA+TGG | - | chr1_2:19265985-19266004 | None:intergenic | 30.0% |
| AAGAAGTCATTCCTAATATG+GGG | - | chr1_2:19266046-19266065 | None:intergenic | 30.0% | |
| GTAAGAAGTCATTCCTAATA+TGG | - | chr1_2:19266048-19266067 | None:intergenic | 30.0% | |
| AATAACAAACCAGAGACTAA+TGG | - | chr1_2:19266153-19266172 | None:intergenic | 30.0% | |
| ATTGTTTAATTGTGGAAACC+TGG | + | chr1_2:19266238-19266257 | Msa0061250:intron | 30.0% | |
| ! | CAGACTAGATAATTCTCTTT+TGG | + | chr1_2:19266404-19266423 | Msa0061250:CDS | 30.0% |
| ACTAGAAGAATACATATGAC+CGG | - | chr1_2:19266453-19266472 | None:intergenic | 30.0% | |
| TATACAATTAAATCTAGGCG+TGG | + | chr1_2:19266509-19266528 | Msa0061250:intron | 30.0% | |
| ATTAGAAGGAGAATCTGATT+TGG | + | chr1_2:19266601-19266620 | Msa0061250:CDS | 30.0% | |
| ! | TTTTGCATCAATTATGGTTC+AGG | + | chr1_2:19266625-19266644 | Msa0061250:CDS | 30.0% |
| ! | AACTATTTCGATTAATGGGT+AGG | + | chr1_2:19266749-19266768 | Msa0061250:intron | 30.0% |
| ! | GGGAAAATAGCAAAATTTTG+AGG | - | chr1_2:19266903-19266922 | None:intergenic | 30.0% |
| TTAAAATAGGGAGAGCAAAT+GGG | - | chr1_2:19266923-19266942 | None:intergenic | 30.0% | |
| ! | TTTAAAATAGGGAGAGCAAA+TGG | - | chr1_2:19266924-19266943 | None:intergenic | 30.0% |
| CACTTAACAATTGAATGCAA+TGG | - | chr1_2:19267010-19267029 | None:intergenic | 30.0% | |
| GAGACCGAAAACATAATTAA+TGG | + | chr1_2:19267114-19267133 | Msa0061250:intron | 30.0% | |
| !! | AAATGTAATGGAGGTGTTAA+TGG | + | chr1_2:19267153-19267172 | Msa0061250:intron | 30.0% |
| !! | AATGTAATGGAGGTGTTAAT+GGG | + | chr1_2:19267154-19267173 | Msa0061250:intron | 30.0% |
| CCCACTAACTACAATTAATA+AGG | + | chr1_2:19267357-19267376 | Msa0061250:intron | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr1_2:19267361-19267380 | None:intergenic | 30.0% | |
| CCCAAAAACATCTAAACAAA+GGG | - | chr1_2:19267670-19267689 | None:intergenic | 30.0% | |
| !! | CCCTTTGTTTAGATGTTTTT+GGG | + | chr1_2:19267667-19267686 | Msa0061250:intron | 30.0% |
| !! | CCTTTGTTTAGATGTTTTTG+GGG | + | chr1_2:19267668-19267687 | Msa0061250:intron | 30.0% |
| !! | TCCCTTTGAAAAAACTTTTC+AGG | + | chr1_2:19267833-19267852 | Msa0061250:intron | 30.0% |
| !!! | GCCTGAAAAGTTTTTTCAAA+GGG | - | chr1_2:19267837-19267856 | None:intergenic | 30.0% |
| !!! | AGCCTGAAAAGTTTTTTCAA+AGG | - | chr1_2:19267838-19267857 | None:intergenic | 30.0% |
| !!! | AGATCTTTTAAAGCAATCAC+TGG | + | chr1_2:19267902-19267921 | Msa0061250:CDS | 30.0% |
| AGAAATATACAAATCCTTCC+CGG | - | chr1_2:19267937-19267956 | None:intergenic | 30.0% | |
| ATATTTCTTTGTATGCCTCT+TGG | + | chr1_2:19267949-19267968 | Msa0061250:CDS | 30.0% | |
| GGAGAAAGAAAGACTTAAAA+TGG | - | chr1_2:19268058-19268077 | None:intergenic | 30.0% | |
| !! | GATCTAGCTTTAGCTTTATT+TGG | + | chr1_2:19268134-19268153 | Msa0061250:intron | 30.0% |
| AGTATTAGTTATGTGGCTAA+AGG | + | chr1_2:19268449-19268468 | Msa0061250:intron | 30.0% | |
| AATAGCCATAAATATCTTGC+AGG | - | chr1_2:19268544-19268563 | None:intergenic | 30.0% | |
| !! | TTTTTAATTGCAGATACCTG+AGG | - | chr1_2:19268598-19268617 | None:intergenic | 30.0% |
| TGTGTTTCAACATCCTTTAT+TGG | + | chr1_2:19268653-19268672 | Msa0061250:intron | 30.0% | |
| TTTCAACATCCTTTATTGGT+AGG | + | chr1_2:19268657-19268676 | Msa0061250:intron | 30.0% | |
| AAAATACCTCCTACCAATAA+AGG | - | chr1_2:19268669-19268688 | None:intergenic | 30.0% | |
| !!! | TGGTGCAAGTTTTGAATTTA+TGG | + | chr1_2:19268771-19268790 | Msa0061250:intron | 30.0% |
| TTTATCCACTTCATTACCAA+AGG | + | chr1_2:19269104-19269123 | Msa0061250:CDS | 30.0% | |
| TTTGTCCACTACATTATCAA+AGG | + | chr1_2:19269140-19269159 | Msa0061250:CDS | 30.0% | |
| !! | GTGATTTGTGATTGATTTGA+CGG | - | chr1_2:19269268-19269287 | None:intergenic | 30.0% |
| GCAAAAATTATTTACCCTGT+CGG | + | chr1_2:19269392-19269411 | Msa0061250:intron | 30.0% | |
| ! | TCATTGTTTTCACTATATGC+AGG | + | chr1_2:19269518-19269537 | Msa0061250:intron | 30.0% |
| AGTGCATATGAACTTTGAAT+GGG | + | chr1_2:19269674-19269693 | Msa0061250:three_prime_UTR | 30.0% | |
| !!! | GTAGCTCGTTTTATTTATAG+AGG | + | chr1_2:19269733-19269752 | Msa0061250:three_prime_UTR | 30.0% |
| !!! | CTCGTTTTATTTATAGAGGT+TGG | + | chr1_2:19269737-19269756 | Msa0061250:three_prime_UTR | 30.0% |
| TTTATTTATAGAGGTTGGGA+TGG | + | chr1_2:19269742-19269761 | Msa0061250:three_prime_UTR | 30.0% | |
| CTGATTTCAACCTGTTTCAA+TGG | + | chr1_2:19260257-19260276 | Msa0061250:exon | 35.0% | |
| ATTTCAACCTGTTTCAATGG+CGG | + | chr1_2:19260260-19260279 | Msa0061250:exon | 35.0% | |
| ! | GCGTTTTTCGTAAAGCTTAT+CGG | - | chr1_2:19260328-19260347 | None:intergenic | 35.0% |
| GAAATTTGAGGGAATTGTTG+TGG | + | chr1_2:19260421-19260440 | Msa0061250:intron | 35.0% | |
| ! | ATTGTTGTGGAATTAGGTTG+AGG | + | chr1_2:19260434-19260453 | Msa0061250:intron | 35.0% |
| !! | TTGTTGTGGAATTAGGTTGA+GGG | + | chr1_2:19260435-19260454 | Msa0061250:intron | 35.0% |
| ! | AGTCTCTGACATTTTCATAC+TGG | + | chr1_2:19260629-19260648 | Msa0061250:intron | 35.0% |
| ! | GTCTCTGACATTTTCATACT+GGG | + | chr1_2:19260630-19260649 | Msa0061250:intron | 35.0% |
| AGCGACTAATGAAAATTGTG+AGG | + | chr1_2:19260709-19260728 | Msa0061250:intron | 35.0% | |
| GCGACTAATGAAAATTGTGA+GGG | + | chr1_2:19260710-19260729 | Msa0061250:intron | 35.0% | |
| AAAATTGTGAGGGATCGAAA+TGG | + | chr1_2:19260720-19260739 | Msa0061250:intron | 35.0% | |
| AAATTGTGAGGGATCGAAAT+GGG | + | chr1_2:19260721-19260740 | Msa0061250:intron | 35.0% | |
| TATGGTTGTACTTGCAATCT+TGG | + | chr1_2:19261003-19261022 | Msa0061250:intron | 35.0% | |
| !! | AGAATCTTCATAGTGGACAT+TGG | + | chr1_2:19261076-19261095 | Msa0061250:intron | 35.0% |
| ACATCTCATACTAATCGATG+TGG | + | chr1_2:19261250-19261269 | Msa0061250:intron | 35.0% | |
| CATCTCATACTAATCGATGT+GGG | + | chr1_2:19261251-19261270 | Msa0061250:intron | 35.0% | |
| GTTAGTAACTCGGGTATTAT+GGG | - | chr1_2:19261286-19261305 | None:intergenic | 35.0% | |
| TGTTAGTAACTCGGGTATTA+TGG | - | chr1_2:19261287-19261306 | None:intergenic | 35.0% | |
| GGATACTATGTTAGTAACTC+GGG | - | chr1_2:19261295-19261314 | None:intergenic | 35.0% | |
| GGGATACTATGTTAGTAACT+CGG | - | chr1_2:19261296-19261315 | None:intergenic | 35.0% | |
| CATCAATTGATATCAGAGAG+GGG | - | chr1_2:19261382-19261401 | None:intergenic | 35.0% | |
| CTCATCAATTGATATCAGAG+AGG | - | chr1_2:19261384-19261403 | None:intergenic | 35.0% | |
| !! | TGATAGCTAACTTTTAAGGG+AGG | - | chr1_2:19261427-19261446 | None:intergenic | 35.0% |
| ACCGCAAATTTCACTCTAAA+CGG | + | chr1_2:19261717-19261736 | Msa0061250:intron | 35.0% | |
| ! | TCCGTTTAGAGTGAAATTTG+CGG | - | chr1_2:19261721-19261740 | None:intergenic | 35.0% |
| !! | TGCTCAAGGAAGTACTTAAT+TGG | - | chr1_2:19261846-19261865 | None:intergenic | 35.0% |
| CAACAGAGATAGGTATAATG+GGG | - | chr1_2:19261899-19261918 | None:intergenic | 35.0% | |
| CTCAACAGAGATAGGTATAA+TGG | - | chr1_2:19261901-19261920 | None:intergenic | 35.0% | |
| CATTATACCTATCTCTGTTG+AGG | + | chr1_2:19261899-19261918 | Msa0061250:intron | 35.0% | |
| ATGTTCTTACTCAATAGGAG+GGG | - | chr1_2:19262106-19262125 | None:intergenic | 35.0% | |
| CTATGTTCTTACTCAATAGG+AGG | - | chr1_2:19262108-19262127 | None:intergenic | 35.0% | |
| AAACTTATATCAGGCTTCCT+TGG | + | chr1_2:19262180-19262199 | Msa0061250:intron | 35.0% | |
| AACTTATATCAGGCTTCCTT+GGG | + | chr1_2:19262181-19262200 | Msa0061250:intron | 35.0% | |
| ! | AACTTTTACAAGCAATCCCA+AGG | - | chr1_2:19262200-19262219 | None:intergenic | 35.0% |
| ! | TTTTACAGTTGTACACGTGT+AGG | + | chr1_2:19262224-19262243 | Msa0061250:intron | 35.0% |
| TATCTGCTGCACAAGTAATT+TGG | + | chr1_2:19262415-19262434 | Msa0061250:intron | 35.0% | |
| ! | GTATACAGCACGAGAAATTT+TGG | + | chr1_2:19262719-19262738 | Msa0061250:intron | 35.0% |
| TATTACTGTGCATCAATGTG+TGG | + | chr1_2:19262805-19262824 | Msa0061250:intron | 35.0% | |
| !! | TTTTGGAAAACCACGTCATT+TGG | + | chr1_2:19262583-19262602 | Msa0061250:intron | 35.0% |
| ACAGATAATACCAAATGACG+TGG | - | chr1_2:19262902-19262921 | None:intergenic | 35.0% | |
| GAGAAAGAATTTAACACAGG+AGG | - | chr1_2:19263164-19263183 | None:intergenic | 35.0% | |
| TCGGAGAAAGAATTTAACAC+AGG | - | chr1_2:19263167-19263186 | None:intergenic | 35.0% | |
| AATAACGAACTCTGCTATCT+TGG | - | chr1_2:19263190-19263209 | None:intergenic | 35.0% | |
| !! | GTGAATTGTGTTTTGTTGCT+AGG | + | chr1_2:19263304-19263323 | Msa0061250:intron | 35.0% |
| !! | AGGACTTTTAAAAGGCTTGT+TGG | - | chr1_2:19263472-19263491 | None:intergenic | 35.0% |
| ! | ACGCATGTAGGACTTTTAAA+AGG | - | chr1_2:19263480-19263499 | None:intergenic | 35.0% |
| TTTGATGTATGAACGCATGT+AGG | - | chr1_2:19263492-19263511 | None:intergenic | 35.0% | |
| TGTCAACAAGTCTCTTTGAA+AGG | - | chr1_2:19263676-19263695 | None:intergenic | 35.0% | |
| TATCAAGAAATGAAAGCAGG+GGG | - | chr1_2:19263735-19263754 | None:intergenic | 35.0% | |
| TAATCCATCCTACCAAAAAC+TGG | - | chr1_2:19263823-19263842 | None:intergenic | 35.0% | |
| TGTTCCAGATATTGATATGC+TGG | + | chr1_2:19263856-19263875 | Msa0061250:CDS | 35.0% | |
| GTTCCAGATATTGATATGCT+GGG | + | chr1_2:19263857-19263876 | Msa0061250:CDS | 35.0% | |
| AAACCCAGCATATCAATATC+TGG | - | chr1_2:19263863-19263882 | None:intergenic | 35.0% | |
| ! | TTTTTCCCATGTTAACTCAC+TGG | + | chr1_2:19264170-19264189 | Msa0061250:intron | 35.0% |
| ! | TTTTCCCATGTTAACTCACT+GGG | + | chr1_2:19264171-19264190 | Msa0061250:intron | 35.0% |
| !! | CAGCAATTATCCACTTTTGT+AGG | + | chr1_2:19264207-19264226 | Msa0061250:intron | 35.0% |
| TTTGTAGGTTTCCCATGTTA+AGG | + | chr1_2:19264222-19264241 | Msa0061250:intron | 35.0% | |
| CTCTTGAAGTCTGTAGATTA+TGG | + | chr1_2:19264393-19264412 | Msa0061250:CDS | 35.0% | |
| GTTCTCCAGATGAATTTACT+AGG | + | chr1_2:19264448-19264467 | Msa0061250:CDS | 35.0% | |
| TAGGTTAACAGCTATCACAT+GGG | + | chr1_2:19264467-19264486 | Msa0061250:CDS | 35.0% | |
| AATGAGTTTGTCAAACTTGG+TGG | + | chr1_2:19264637-19264656 | Msa0061250:CDS | 35.0% | |
| ATCAGATATGCAAGGCAAAA+TGG | - | chr1_2:19264701-19264720 | None:intergenic | 35.0% | |
| GAAGAGAAAATTAGAGTGGT+AGG | + | chr1_2:19264724-19264743 | Msa0061250:intron | 35.0% | |
| ! | AGTTTTCTAACCTGGGAAAA+AGG | + | chr1_2:19264985-19265004 | Msa0061250:intron | 35.0% |
| CAATCAGTGCAAACTATAGT+TGG | - | chr1_2:19265116-19265135 | None:intergenic | 35.0% | |
| !!! | TGCACTGATTGTACTGATTT+TGG | + | chr1_2:19265125-19265144 | Msa0061250:intron | 35.0% |
| !!! | GCACTGATTGTACTGATTTT+GGG | + | chr1_2:19265126-19265145 | Msa0061250:intron | 35.0% |
| !!! | GATTGTACTGATTTTGGGAA+TGG | + | chr1_2:19265131-19265150 | Msa0061250:intron | 35.0% |
| CAATACGATGTCTGTTTAAC+AGG | - | chr1_2:19265227-19265246 | None:intergenic | 35.0% | |
| GTTAAACAGACATCGTATTG+AGG | + | chr1_2:19265227-19265246 | Msa0061250:CDS | 35.0% | |
| AAAAGTGATTACTCCGAGAA+GGG | - | chr1_2:19265560-19265579 | None:intergenic | 35.0% | |
| AAAAAGTGATTACTCCGAGA+AGG | - | chr1_2:19265561-19265580 | None:intergenic | 35.0% | |
| TTGCAAGTCATTATCACCAA+TGG | - | chr1_2:19265604-19265623 | None:intergenic | 35.0% | |
| ! | ACTGATTACTTGTCTGAAAC+AGG | + | chr1_2:19265623-19265642 | Msa0061250:intron | 35.0% |
| ! | GGGTGTCAAATATGTCATTT+AGG | - | chr1_2:19265659-19265678 | None:intergenic | 35.0% |
| !! | ATCTGAAAGTGCTTTGAGTA+GGG | - | chr1_2:19265679-19265698 | None:intergenic | 35.0% |
| ! | CAATACCGAATATGGTGTTT+TGG | + | chr1_2:19265912-19265931 | Msa0061250:intron | 35.0% |
| ACGTTCCAAAACACCATATT+CGG | - | chr1_2:19265920-19265939 | None:intergenic | 35.0% | |
| ! | TATTTCTGATCACAAGCCAT+AGG | + | chr1_2:19265966-19265985 | Msa0061250:intron | 35.0% |
| AGAAGTCATTCCTAATATGG+GGG | - | chr1_2:19266045-19266064 | None:intergenic | 35.0% | |
| ! | TCTTGATTACCATTAGTCTC+TGG | + | chr1_2:19266141-19266160 | Msa0061250:intron | 35.0% |
| AATATGCTGTGTTATGTGGA+TGG | + | chr1_2:19266718-19266737 | Msa0061250:intron | 35.0% | |
| ! | TTCGATTAATGGGTAGGATT+TGG | + | chr1_2:19266755-19266774 | Msa0061250:intron | 35.0% |
| ! | CACAATCAGCTAACTTTTCA+AGG | + | chr1_2:19266798-19266817 | Msa0061250:intron | 35.0% |
| ! | TTCAAGGTTACTGTAGCTTT+TGG | + | chr1_2:19266814-19266833 | Msa0061250:intron | 35.0% |
| GACTATTATTATGAGACGGA+GGG | - | chr1_2:19267220-19267239 | None:intergenic | 35.0% | |
| AGACTATTATTATGAGACGG+AGG | - | chr1_2:19267221-19267240 | None:intergenic | 35.0% | |
| GACAATAATTTAGAGACGGA+GGG | + | chr1_2:19267463-19267482 | Msa0061250:intron | 35.0% | |
| AAATTGTACTTCGATGGAGT+TGG | + | chr1_2:19267502-19267521 | Msa0061250:intron | 35.0% | |
| TGATTATAGCCTACGATAGA+GGG | - | chr1_2:19267604-19267623 | None:intergenic | 35.0% | |
| TTGATTATAGCCTACGATAG+AGG | - | chr1_2:19267605-19267624 | None:intergenic | 35.0% | |
| !! | GCCCTTTGTTTAGATGTTTT+TGG | + | chr1_2:19267666-19267685 | Msa0061250:intron | 35.0% |
| CCCCAAAAACATCTAAACAA+AGG | - | chr1_2:19267671-19267690 | None:intergenic | 35.0% | |
| TCGAACAATGAAGCAGTTAA+AGG | - | chr1_2:19267736-19267755 | None:intergenic | 35.0% | |
| GAAATTCAGACAATCCTATG+TGG | + | chr1_2:19267780-19267799 | Msa0061250:intron | 35.0% | |
| TGAATACTGTTTCACCACAT+AGG | - | chr1_2:19267797-19267816 | None:intergenic | 35.0% | |
| CAGAGACTTATAATTGCCAT+TGG | - | chr1_2:19267984-19268003 | None:intergenic | 35.0% | |
| TAAAGCTAAAGCTAGATCCA+CGG | - | chr1_2:19268132-19268151 | None:intergenic | 35.0% | |
| AGCGAATCAATTTATCCAGT+TGG | - | chr1_2:19268277-19268296 | None:intergenic | 35.0% | |
| CTTTGCTTATCTTAGATTGC+AGG | + | chr1_2:19268313-19268332 | Msa0061250:CDS | 35.0% | |
| TCGATCCTGCAAGATATTTA+TGG | + | chr1_2:19268536-19268555 | Msa0061250:CDS | 35.0% | |
| !! | TGGCTATTCAAAGCATTGTA+TGG | + | chr1_2:19268556-19268575 | Msa0061250:CDS | 35.0% |
| ! | AATTGGTAATAATCCCCAGA+AGG | - | chr1_2:19268925-19268944 | None:intergenic | 35.0% |
| !! | ATAATGTAGTGGACAAACTG+AGG | - | chr1_2:19269137-19269156 | None:intergenic | 35.0% |
| !! | AGCAACCTTTGATAATGTAG+TGG | - | chr1_2:19269148-19269167 | None:intergenic | 35.0% |
| CTACATTATCAAAGGTTGCT+AGG | + | chr1_2:19269148-19269167 | Msa0061250:intron | 35.0% | |
| ! | TTAATTCATATGCACCGACA+GGG | - | chr1_2:19269409-19269428 | None:intergenic | 35.0% |
| ! | TTTAATTCATATGCACCGAC+AGG | - | chr1_2:19269410-19269429 | None:intergenic | 35.0% |
| ! | TTGTTTTCACTATATGCAGG+AGG | + | chr1_2:19269521-19269540 | Msa0061250:intron | 35.0% |
| ! | TCAATAGACTGAGTTTTCTG+TGG | - | chr1_2:19269564-19269583 | None:intergenic | 35.0% |
| GAATTTCTCCTTGATCTTGA+AGG | - | chr1_2:19269600-19269619 | None:intergenic | 35.0% | |
| TCAAGATCAAGGAGAAATTC+AGG | + | chr1_2:19269600-19269619 | Msa0061250:CDS | 35.0% | |
| CAAGATCAAGGAGAAATTCA+GGG | + | chr1_2:19269601-19269620 | Msa0061250:CDS | 35.0% | |
| CAGTGCATATGAACTTTGAA+TGG | + | chr1_2:19269673-19269692 | Msa0061250:three_prime_UTR | 35.0% | |
| GTGCATATGAACTTTGAATG+GGG | + | chr1_2:19269675-19269694 | Msa0061250:three_prime_UTR | 35.0% | |
| ATATGAACTTTGAATGGGGT+CGG | + | chr1_2:19269679-19269698 | Msa0061250:three_prime_UTR | 35.0% | |
| ! | TTTGGAATCAAGATGAAGCT+TGG | + | chr1_2:19269777-19269796 | Msa0061250:three_prime_UTR | 35.0% |
| TTGGAATCAAGATGAAGCTT+GGG | + | chr1_2:19269778-19269797 | Msa0061250:three_prime_UTR | 35.0% | |
| !! | GCATTATTTCTATCTTTCGG+AGG | - | chr1_2:19269952-19269971 | None:intergenic | 35.0% |
| ACTGTTGAGCTGGAAAATAG+AGG | - | chr1_2:19259927-19259946 | None:intergenic | 40.0% | |
| ! | TTTCTGAGAAACTGTTGAGC+TGG | - | chr1_2:19259937-19259956 | None:intergenic | 40.0% |
| GAGGGAATTGTTGTGGAATT+AGG | + | chr1_2:19260428-19260447 | Msa0061250:intron | 40.0% | |
| !! | TGTTGTGGAATTAGGTTGAG+GGG | + | chr1_2:19260436-19260455 | Msa0061250:intron | 40.0% |
| ! | TGTATTGGTATGATGAAGGG+AGG | + | chr1_2:19260834-19260853 | Msa0061250:intron | 40.0% |
| ! | GTATTGGTATGATGAAGGGA+GGG | + | chr1_2:19260835-19260854 | Msa0061250:intron | 40.0% |
| AGCTTCATTAGTCAACCCAA+CGG | - | chr1_2:19260883-19260902 | None:intergenic | 40.0% | |
| TATGCGTGCTTGTTTGTGAT+GGG | + | chr1_2:19260970-19260989 | Msa0061250:intron | 40.0% | |
| ! | GTGATGGGATATGCTTCATA+TGG | + | chr1_2:19260985-19261004 | Msa0061250:intron | 40.0% |
| !! | ATAGTGGACATTGGATCTTC+TGG | + | chr1_2:19261085-19261104 | Msa0061250:intron | 40.0% |
| ! | AGAATGCTATTTAAGCGCTC+AGG | - | chr1_2:19261190-19261209 | None:intergenic | 40.0% |
| CTGAACTTCAGCATTCAAGA+GGG | - | chr1_2:19261316-19261335 | None:intergenic | 40.0% | |
| TAGTTAGAGCCTATGATGCA+TGG | + | chr1_2:19261449-19261468 | Msa0061250:intron | 40.0% | |
| AGTTAGAGCCTATGATGCAT+GGG | + | chr1_2:19261450-19261469 | Msa0061250:intron | 40.0% | |
| TAAACGGAATGCGAGAGATA+AGG | + | chr1_2:19261733-19261752 | Msa0061250:intron | 40.0% | |
| TTTGTTCTACGCTGAAGCAT+GGG | - | chr1_2:19261822-19261841 | None:intergenic | 40.0% | |
| ATTTGTTCTACGCTGAAGCA+TGG | - | chr1_2:19261823-19261842 | None:intergenic | 40.0% | |
| ! | AGACAATGCAAAAGTGCAGT+TGG | - | chr1_2:19262355-19262374 | None:intergenic | 40.0% |
| AGCAGATAATGCTAATGACG+TGG | - | chr1_2:19262403-19262422 | None:intergenic | 40.0% | |
| ! | AGACAATGCAAAAGTGCAGT+TGG | - | chr1_2:19262355-19262374 | None:intergenic | 40.0% |
| TATTATTCTGGGTCAATGCG+TGG | + | chr1_2:19262652-19262671 | Msa0061250:intron | 40.0% | |
| ! | ACACAATGCAAAAGTGCAGT+TGG | - | chr1_2:19262701-19262720 | None:intergenic | 40.0% |
| ! | AGACAATGCAAAAGTGCAGT+TGG | - | chr1_2:19262355-19262374 | None:intergenic | 40.0% |
| ! | TTTTGTTGCTAGGTTGTGAG+AGG | + | chr1_2:19263314-19263333 | Msa0061250:intron | 40.0% |
| ! | TGCATAAGGCATCAAAGATC+TGG | - | chr1_2:19263361-19263380 | None:intergenic | 40.0% |
| ATCTGCAGAAAGCTTGCATA+AGG | - | chr1_2:19263375-19263394 | None:intergenic | 40.0% | |
| ATGTGCAGCACTTTGTACAT+TGG | - | chr1_2:19263405-19263424 | None:intergenic | 40.0% | |
| !! | TAAAAGGCTTGTTGGAGTTC+AGG | - | chr1_2:19263464-19263483 | None:intergenic | 40.0% |
| !! | CAAAGAGACTTGTTGACATG+TGG | + | chr1_2:19263678-19263697 | Msa0061250:intron | 40.0% |
| ATCAAGAAATGAAAGCAGGG+GGG | - | chr1_2:19263734-19263753 | None:intergenic | 40.0% | |
| !! | GGTAGGATGGATTACTGTAT+TGG | + | chr1_2:19263829-19263848 | Msa0061250:CDS | 40.0% |
| CACTCACCATCAAGAAAATC+AGG | - | chr1_2:19263890-19263909 | None:intergenic | 40.0% | |
| TTTCCCATGTTAACTCACTG+GGG | + | chr1_2:19264172-19264191 | Msa0061250:intron | 40.0% | |
| ACATGGGAAACCTACAAAAG+TGG | - | chr1_2:19264220-19264239 | None:intergenic | 40.0% | |
| GTCTGTAGATTATGGTCGAA+TGG | + | chr1_2:19264401-19264420 | Msa0061250:CDS | 40.0% | |
| CTAGGTTAACAGCTATCACA+TGG | + | chr1_2:19264466-19264485 | Msa0061250:CDS | 40.0% | |
| ! | ATCAGTGTTTTGCTTAGCGT+TGG | + | chr1_2:19264537-19264556 | Msa0061250:intron | 40.0% |
| CCAAGAATGTCAGCATAGTA+TGG | - | chr1_2:19264676-19264695 | None:intergenic | 40.0% | |
| CCATACTATGCTGACATTCT+TGG | + | chr1_2:19264673-19264692 | Msa0061250:CDS | 40.0% | |
| !!! | TCCCATATTTTAGTGTTGCC+TGG | + | chr1_2:19264801-19264820 | Msa0061250:intron | 40.0% |
| GCCAGGCAACACTAAAATAT+GGG | - | chr1_2:19264805-19264824 | None:intergenic | 40.0% | |
| TGCCAGGCAACACTAAAATA+TGG | - | chr1_2:19264806-19264825 | None:intergenic | 40.0% | |
| GGCTTATTTGTAAGGTTGCT+CGG | + | chr1_2:19264875-19264894 | Msa0061250:intron | 40.0% | |
| GCTTATTTGTAAGGTTGCTC+GGG | + | chr1_2:19264876-19264895 | Msa0061250:intron | 40.0% | |
| ATCAAAAGCTTCAGCTGGAT+CGG | - | chr1_2:19264932-19264951 | None:intergenic | 40.0% | |
| AAAACTACACCTCCTTGCAA+TGG | - | chr1_2:19264971-19264990 | None:intergenic | 40.0% | |
| ! | GAGGTGTAGTTTTCTAACCT+GGG | + | chr1_2:19264978-19264997 | Msa0061250:intron | 40.0% |
| !!! | GATTTTGGGAATGGTTTGCT+TGG | + | chr1_2:19265140-19265159 | Msa0061250:intron | 40.0% |
| TTAGGCAACTCTCTAGTGAA+TGG | + | chr1_2:19265163-19265182 | Msa0061250:intron | 40.0% | |
| TAGGCAACTCTCTAGTGAAT+GGG | + | chr1_2:19265164-19265183 | Msa0061250:intron | 40.0% | |
| AGAGACAGTAGCGTCAAAAT+GGG | - | chr1_2:19265345-19265364 | None:intergenic | 40.0% | |
| AAGAGACAGTAGCGTCAAAA+TGG | - | chr1_2:19265346-19265365 | None:intergenic | 40.0% | |
| !! | GATCTGAAAGTGCTTTGAGT+AGG | - | chr1_2:19265680-19265699 | None:intergenic | 40.0% |
| ACTTTCAGATCCATCTGATG+AGG | + | chr1_2:19265689-19265708 | Msa0061250:CDS | 40.0% | |
| GGTGAAATTACCTCATCAGA+TGG | - | chr1_2:19265702-19265721 | None:intergenic | 40.0% | |
| !!! | GAATATGGTGTTTTGGAACG+TGG | + | chr1_2:19265919-19265938 | Msa0061250:intron | 40.0% |
| ! | CTAGTCTGAAATTGTGCACA+AGG | - | chr1_2:19266392-19266411 | None:intergenic | 40.0% |
| !! | GTAAGCTGTTTTCCTTCATC+CGG | + | chr1_2:19266431-19266450 | Msa0061250:intron | 40.0% |
| GAATACATATGACCGGATGA+AGG | - | chr1_2:19266446-19266465 | None:intergenic | 40.0% | |
| ! | GCAGCTATTTGTTTAGCTCA+GGG | - | chr1_2:19266665-19266684 | None:intergenic | 40.0% |
| ! | TGCAGCTATTTGTTTAGCTC+AGG | - | chr1_2:19266666-19266685 | None:intergenic | 40.0% |
| GTACTAACGAAGAGATCGTT+TGG | - | chr1_2:19266986-19267005 | None:intergenic | 40.0% | |
| TCAATTGTTAAGTGCACACG+TGG | + | chr1_2:19267016-19267035 | Msa0061250:intron | 40.0% | |
| AGGTTTGTGCACGGTTATTA+AGG | - | chr1_2:19267438-19267457 | None:intergenic | 40.0% | |
| ! | TGTCGTTTAAGGTTTGTGCA+CGG | - | chr1_2:19267447-19267466 | None:intergenic | 40.0% |
| CGACAATAATTTAGAGACGG+AGG | + | chr1_2:19267462-19267481 | Msa0061250:intron | 40.0% | |
| GTTGACCTAAAAATGCTGCA+TGG | + | chr1_2:19267578-19267597 | Msa0061250:intron | 40.0% | |
| ! | GCACAAAGCATTAACTTCTG+TGG | - | chr1_2:19267638-19267657 | None:intergenic | 40.0% |
| AAGTTAATGCTTTGTGCTCC+AGG | + | chr1_2:19267641-19267660 | Msa0061250:intron | 40.0% | |
| !!! | TGTTTTTGGGGTAACAGTTC+TGG | + | chr1_2:19267680-19267699 | Msa0061250:intron | 40.0% |
| !!! | GTTTTTGGGGTAACAGTTCT+GGG | + | chr1_2:19267681-19267700 | Msa0061250:intron | 40.0% |
| ! | AAGTGCTGTGATTCAATCTC+TGG | + | chr1_2:19268220-19268239 | Msa0061250:CDS | 40.0% |
| !!! | TGTGAAGTTTTTGGTCCAAC+TGG | + | chr1_2:19268259-19268278 | Msa0061250:CDS | 40.0% |
| !! | GGATAAATTGATTCGCTTGC+TGG | + | chr1_2:19268280-19268299 | Msa0061250:CDS | 40.0% |
| CAACATCCTTTATTGGTAGG+AGG | + | chr1_2:19268660-19268679 | Msa0061250:intron | 40.0% | |
| TGAACGACGACGTATATACT+AGG | - | chr1_2:19268743-19268762 | None:intergenic | 40.0% | |
| GCACGATTGAAAGAATACGA+TGG | - | chr1_2:19268886-19268905 | None:intergenic | 40.0% | |
| AACTGAATAGAGAGCCTTCT+GGG | + | chr1_2:19268908-19268927 | Msa0061250:CDS | 40.0% | |
| AGAAAATGCAGCAGCAACAT+CGG | + | chr1_2:19269049-19269068 | Msa0061250:CDS | 40.0% | |
| !! | AGCAACCTTTGGTAATGAAG+TGG | - | chr1_2:19269112-19269131 | None:intergenic | 40.0% |
| CGATGATTGTGATTGACTGT+TGG | + | chr1_2:19269368-19269387 | Msa0061250:intron | 40.0% | |
| TTCTCCTTGATCTTGAAGGA+GGG | - | chr1_2:19269596-19269615 | None:intergenic | 40.0% | |
| TTTCTCCTTGATCTTGAAGG+AGG | - | chr1_2:19269597-19269616 | None:intergenic | 40.0% | |
| AGGTTGGGATGGTGAATATT+GGG | + | chr1_2:19269753-19269772 | Msa0061250:three_prime_UTR | 40.0% | |
| ! | GGATGGTGAATATTGGGTTT+TGG | + | chr1_2:19269759-19269778 | Msa0061250:three_prime_UTR | 40.0% |
| TGGAATCAAGATGAAGCTTG+GGG | + | chr1_2:19269779-19269798 | Msa0061250:three_prime_UTR | 40.0% | |
| ! | TTTCTATCTTTCGGAGGCAT+AGG | - | chr1_2:19269946-19269965 | None:intergenic | 40.0% |
| TGCGGATTTCGTTTCGAGAA+TGG | - | chr1_2:19260160-19260179 | None:intergenic | 45.0% | |
| CTGCTCGAAACGAAACATTG+CGG | - | chr1_2:19260178-19260197 | None:intergenic | 45.0% | |
| AAAGCTTATCGGCGAGGTTA+CGG | - | chr1_2:19260317-19260336 | None:intergenic | 45.0% | |
| TTTCGTAAAGCTTATCGGCG+AGG | - | chr1_2:19260323-19260342 | None:intergenic | 45.0% | |
| !! | ATGATTTGCTTGCGGCGAAT+AGG | - | chr1_2:19260538-19260557 | None:intergenic | 45.0% |
| !! | ACCTTGCGATGATTTGCTTG+CGG | - | chr1_2:19260546-19260565 | None:intergenic | 45.0% |
| CTATGCGTGCTTGTTTGTGA+TGG | + | chr1_2:19260969-19260988 | Msa0061250:intron | 45.0% | |
| ! | TGAGGGAGAGTATAAGCTTC+AGG | + | chr1_2:19261133-19261152 | Msa0061250:intron | 45.0% |
| CCTGAACTTCAGCATTCAAG+AGG | - | chr1_2:19261317-19261336 | None:intergenic | 45.0% | |
| CCTCTTGAATGCTGAAGTTC+AGG | + | chr1_2:19261314-19261333 | Msa0061250:intron | 45.0% | |
| GACACATACCCATGCATCAT+AGG | - | chr1_2:19261461-19261480 | None:intergenic | 45.0% | |
| ATGATGCATGGGTATGTGTC+CGG | + | chr1_2:19261461-19261480 | Msa0061250:intron | 45.0% | |
| ATGTATCTTGTACCCCGTAC+CGG | - | chr1_2:19261483-19261502 | None:intergenic | 45.0% | |
| ATCTCACCCTCAACAGAGAT+AGG | - | chr1_2:19261909-19261928 | None:intergenic | 45.0% | |
| TCTGTTGAGGGTGAGATGAA+GGG | + | chr1_2:19261912-19261931 | Msa0061250:intron | 45.0% | |
| CACATGTTGTCACGCACATA+TGG | - | chr1_2:19263043-19263062 | None:intergenic | 45.0% | |
| ACGAACTCTGCTATCTTGGT+CGG | - | chr1_2:19263186-19263205 | None:intergenic | 45.0% | |
| !! | TCTCTTAGATCGACTCGTGA+AGG | + | chr1_2:19263424-19263443 | Msa0061250:CDS | 45.0% |
| TGACCGAAAGTGATCAGTTC+AGG | + | chr1_2:19263602-19263621 | Msa0061250:CDS | 45.0% | |
| GCACCTGAACTGATCACTTT+CGG | - | chr1_2:19263608-19263627 | None:intergenic | 45.0% | |
| TTCATGCGCTCCCTCAATAA+TGG | - | chr1_2:19263779-19263798 | None:intergenic | 45.0% | |
| ! | TCCATATGTCCGCCAGTTTT+TGG | + | chr1_2:19263808-19263827 | Msa0061250:CDS | 45.0% |
| ! | ACCAAAAACTGGCGGACATA+TGG | - | chr1_2:19263812-19263831 | None:intergenic | 45.0% |
| !!! | TATGTCCGCCAGTTTTTGGT+AGG | + | chr1_2:19263812-19263831 | Msa0061250:CDS | 45.0% |
| TCCATCCTACCAAAAACTGG+CGG | - | chr1_2:19263820-19263839 | None:intergenic | 45.0% | |
| CTTCCCCAGTGAGTTAACAT+GGG | - | chr1_2:19264178-19264197 | None:intergenic | 45.0% | |
| TCTTCCCCAGTGAGTTAACA+TGG | - | chr1_2:19264179-19264198 | None:intergenic | 45.0% | |
| TGGTCGAATGGCTGAAATTC+TGG | + | chr1_2:19264413-19264432 | Msa0061250:CDS | 45.0% | |
| TGGCTGAAATTCTGGTACAG+AGG | + | chr1_2:19264421-19264440 | Msa0061250:CDS | 45.0% | |
| GGCTGAAATTCTGGTACAGA+GGG | + | chr1_2:19264422-19264441 | Msa0061250:CDS | 45.0% | |
| ACAGCTATCACATGGGTAAG+TGG | + | chr1_2:19264474-19264493 | Msa0061250:intron | 45.0% | |
| CAGCATAGTATGGAACAAGC+TGG | - | chr1_2:19264666-19264685 | None:intergenic | 45.0% | |
| TGTACTGAGTTGTACATGCC+AGG | - | chr1_2:19264822-19264841 | None:intergenic | 45.0% | |
| GATTGCTCGTAGCTCTTCAT+TGG | - | chr1_2:19264905-19264924 | None:intergenic | 45.0% | |
| CCTACATCAAAAGCTTCAGC+TGG | - | chr1_2:19264937-19264956 | None:intergenic | 45.0% | |
| ! | CCAGCTGAAGCTTTTGATGT+AGG | + | chr1_2:19264934-19264953 | Msa0061250:CDS | 45.0% |
| !! | GGAGGTGTAGTTTTCTAACC+TGG | + | chr1_2:19264977-19264996 | Msa0061250:intron | 45.0% |
| TTCTAACCTGGGAAAAAGGC+TGG | + | chr1_2:19264989-19265008 | Msa0061250:intron | 45.0% | |
| TCTAACCTGGGAAAAAGGCT+GGG | + | chr1_2:19264990-19265009 | Msa0061250:intron | 45.0% | |
| TACAGTGGTGAGCAATAGTC+AGG | + | chr1_2:19265053-19265072 | Msa0061250:intron | 45.0% | |
| !! | TGGGAATGGTTTGCTTGGTT+AGG | + | chr1_2:19265145-19265164 | Msa0061250:intron | 45.0% |
| CTCGAATCGAAGCTTTGCAT+TGG | + | chr1_2:19265193-19265212 | Msa0061250:CDS | 45.0% | |
| CTATGAGATAGACATCGAGG+AGG | - | chr1_2:19265308-19265327 | None:intergenic | 45.0% | |
| GCTCTATGAGATAGACATCG+AGG | - | chr1_2:19265311-19265330 | None:intergenic | 45.0% | |
| GAGACAGTAGCGTCAAAATG+GGG | - | chr1_2:19265344-19265363 | None:intergenic | 45.0% | |
| !! | TTCATTGGCTCTTGGACTGA+CGG | - | chr1_2:19265420-19265439 | None:intergenic | 45.0% |
| GTCCAAGAGCCAATGAAACA+CGG | + | chr1_2:19265423-19265442 | Msa0061250:intron | 45.0% | |
| TCCAAGAGCCAATGAAACAC+GGG | + | chr1_2:19265424-19265443 | Msa0061250:intron | 45.0% | |
| TTGATGTGCCCGTGTTTCAT+TGG | - | chr1_2:19265435-19265454 | None:intergenic | 45.0% | |
| TGTACTTGTCAAGCCCTTCT+CGG | + | chr1_2:19265544-19265563 | Msa0061250:intron | 45.0% | |
| CAAGGAAAACGACAAGATGC+CGG | - | chr1_2:19266374-19266393 | None:intergenic | 45.0% | |
| ! | CGGCATTCAAAAGCACACAA+AGG | - | chr1_2:19266553-19266572 | None:intergenic | 45.0% |
| AAGTTCACGGTAGACTCTCT+CGG | - | chr1_2:19266573-19266592 | None:intergenic | 45.0% | |
| ATGCAACTAGACAGCGCATT+TGG | + | chr1_2:19267040-19267059 | Msa0061250:intron | 45.0% | |
| GTGCAAGATTGCAATGCTCA+AGG | + | chr1_2:19267527-19267546 | Msa0061250:intron | 45.0% | |
| ! | ATGCTCAAGGCGCTATTTGA+TGG | + | chr1_2:19267540-19267559 | Msa0061250:intron | 45.0% |
| !! | TAACAGTTCTGGGACACCAT+TGG | + | chr1_2:19267691-19267710 | Msa0061250:intron | 45.0% |
| CAATCACTGGTAAATCCTGC+CGG | + | chr1_2:19267915-19267934 | Msa0061250:CDS | 45.0% | |
| AATCACTGGTAAATCCTGCC+GGG | + | chr1_2:19267916-19267935 | Msa0061250:CDS | 45.0% | |
| ATATACAAATCCTTCCCGGC+AGG | - | chr1_2:19267933-19267952 | None:intergenic | 45.0% | |
| CATTGGAGAATGACACCAAG+AGG | - | chr1_2:19267967-19267986 | None:intergenic | 45.0% | |
| !! | CTCTTGGTGTCATTCTCCAA+TGG | + | chr1_2:19267965-19267984 | Msa0061250:CDS | 45.0% |
| AAGTCTCTGCTTTGTAGCTC+AGG | + | chr1_2:19267995-19268014 | Msa0061250:CDS | 45.0% | |
| TGTGTGTCCAATTGCACAGT+GGG | - | chr1_2:19268083-19268102 | None:intergenic | 45.0% | |
| GAATCACAGCACTTGCATGT+CGG | - | chr1_2:19268214-19268233 | None:intergenic | 45.0% | |
| TGCTGTGATTCAATCTCTGG+AGG | + | chr1_2:19268223-19268242 | Msa0061250:CDS | 45.0% | |
| ! | TGTGATTCAATCTCTGGAGG+AGG | + | chr1_2:19268226-19268245 | Msa0061250:CDS | 45.0% |
| TCTTCTGATGTTGCTACCTC+AGG | + | chr1_2:19268579-19268598 | Msa0061250:CDS | 45.0% | |
| CAACTGAATAGAGAGCCTTC+TGG | + | chr1_2:19268907-19268926 | Msa0061250:CDS | 45.0% | |
| ACTGAATAGAGAGCCTTCTG+GGG | + | chr1_2:19268909-19268928 | Msa0061250:CDS | 45.0% | |
| CAGGCATCTGAGGAAGAAAT+TGG | - | chr1_2:19268942-19268961 | None:intergenic | 45.0% | |
| TTTCTTCCTCAGATGCCTGA+TGG | + | chr1_2:19268943-19268962 | Msa0061250:CDS | 45.0% | |
| TTTGTTCCATCAGGCATCTG+AGG | - | chr1_2:19268952-19268971 | None:intergenic | 45.0% | |
| GATGCCTGATGGAACAAAAG+AGG | + | chr1_2:19268954-19268973 | Msa0061250:CDS | 45.0% | |
| ! | CCATCCTCTTTTGTTCCATC+AGG | - | chr1_2:19268961-19268980 | None:intergenic | 45.0% |
| CCTGATGGAACAAAAGAGGA+TGG | + | chr1_2:19268958-19268977 | Msa0061250:CDS | 45.0% | |
| ! | GATGGTGATGCAACTGAAGA+TGG | + | chr1_2:19268976-19268995 | Msa0061250:CDS | 45.0% |
| GTGATGCAACTGAAGATGGT+GGG | + | chr1_2:19268980-19268999 | Msa0061250:CDS | 45.0% | |
| GAAAATGCAGCAGCAACATC+GGG | + | chr1_2:19269050-19269069 | Msa0061250:CDS | 45.0% | |
| AAACTGAGGCTAGCAACCTT+TGG | - | chr1_2:19269123-19269142 | None:intergenic | 45.0% | |
| AGGCTCTTCATTCTGCTTGT+TGG | + | chr1_2:19269168-19269187 | Msa0061250:intron | 45.0% | |
| ATGTCCCTCCTTCAAGATCA+AGG | + | chr1_2:19269589-19269608 | Msa0061250:CDS | 45.0% | |
| GAGGTTGGGATGGTGAATAT+TGG | + | chr1_2:19269752-19269771 | Msa0061250:three_prime_UTR | 45.0% | |
| GGAATCAAGATGAAGCTTGG+GGG | + | chr1_2:19269780-19269799 | Msa0061250:three_prime_UTR | 45.0% | |
| ! | ATGAAGCTTGGGGGTTTTCT+GGG | + | chr1_2:19269789-19269808 | Msa0061250:three_prime_UTR | 45.0% |
| GAGCATCACGTTCTTCTACA+AGG | - | chr1_2:19269827-19269846 | None:intergenic | 45.0% | |
| !! | TGAAATCCTTGTGGGCTAGA+TGG | + | chr1_2:19269868-19269887 | Msa0061250:three_prime_UTR | 45.0% |
| !! | GAAATCCTTGTGGGCTAGAT+GGG | + | chr1_2:19269869-19269888 | Msa0061250:three_prime_UTR | 45.0% |
| AATATCCCATCTAGCCCACA+AGG | - | chr1_2:19269877-19269896 | None:intergenic | 45.0% | |
| !! | AAGATAATTAATAATAATTA+CGG | - | chr1_2:19259982-19260001 | None:intergenic | 5.0% |
| !! | ATAAAAATAAAAAAATATGT+AGG | - | chr1_2:19263130-19263149 | None:intergenic | 5.0% |
| !!! | TTTGATTTAATAAAAAAAAT+GGG | - | chr1_2:19265741-19265760 | None:intergenic | 5.0% |
| !!! | ATTTGATTTAATAAAAAAAA+TGG | - | chr1_2:19265742-19265761 | None:intergenic | 5.0% |
| !!! | TAATGTTTTAAAAAATATTA+TGG | + | chr1_2:19266859-19266878 | Msa0061250:intron | 5.0% |
| CGCAATGTTTCGTTTCGAGC+AGG | + | chr1_2:19260176-19260195 | Msa0061250:five_prime_UTR | 50.0% | |
| ! | AGAGCATCCGCCATTGAAAC+AGG | - | chr1_2:19260270-19260289 | None:intergenic | 50.0% |
| ACGCAAAAATGCTGCACTCG+AGG | + | chr1_2:19260344-19260363 | Msa0061250:CDS | 50.0% | |
| AGTTTAGCTGCTGCTACCGT+TGG | + | chr1_2:19260864-19260883 | Msa0061250:CDS | 50.0% | |
| GTTTAGCTGCTGCTACCGTT+GGG | + | chr1_2:19260865-19260884 | Msa0061250:CDS | 50.0% | |
| ! | CAGAGAGGGGTTGATTGCAA+AGG | - | chr1_2:19261369-19261388 | None:intergenic | 50.0% |
| GATAAGGAGTCCCACAGGTA+CGG | + | chr1_2:19261749-19261768 | Msa0061250:intron | 50.0% | |
| AGTATGCCTACCGTACCTGT+GGG | - | chr1_2:19261762-19261781 | None:intergenic | 50.0% | |
| ACAGGTACGGTAGGCATACT+CGG | + | chr1_2:19261762-19261781 | Msa0061250:intron | 50.0% | |
| TACGGTAGGCATACTCGGTA+CGG | + | chr1_2:19261767-19261786 | Msa0061250:intron | 50.0% | |
| CTCTGTTGAGGGTGAGATGA+AGG | + | chr1_2:19261911-19261930 | Msa0061250:intron | 50.0% | |
| !!! | TCCGCCAGTTTTTGGTAGGA+TGG | + | chr1_2:19263816-19263835 | Msa0061250:CDS | 50.0% |
| GAAATTCTGGTACAGAGGGC+TGG | + | chr1_2:19264426-19264445 | Msa0061250:CDS | 50.0% | |
| GAGCAATCCTCTCCATTGCA+AGG | + | chr1_2:19264956-19264975 | Msa0061250:CDS | 50.0% | |
| CAATCCTCTCCATTGCAAGG+AGG | + | chr1_2:19264959-19264978 | Msa0061250:CDS | 50.0% | |
| TACACCTCCTTGCAATGGAG+AGG | - | chr1_2:19264966-19264985 | None:intergenic | 50.0% | |
| ! | TCAAACCCAGCCTTTTTCCC+AGG | - | chr1_2:19264998-19265017 | None:intergenic | 50.0% |
| GCAACTCTCTAGTGAATGGG+AGG | + | chr1_2:19265167-19265186 | Msa0061250:CDS | 50.0% | |
| AATATGGGGGTGAGCCAATG+TGG | - | chr1_2:19266032-19266051 | None:intergenic | 50.0% | |
| !! | CATTGGCTCACCCCCATATT+AGG | + | chr1_2:19266032-19266051 | Msa0061250:intron | 50.0% |
| CAAGAGATCCTCAGCACTTC+CGG | + | chr1_2:19266352-19266371 | Msa0061250:CDS | 50.0% | |
| ! | AGACGGAGGGAGTATGTTGT+TGG | - | chr1_2:19267207-19267226 | None:intergenic | 50.0% |
| ! | GAGGGCCATGCAGCATTTTT+AGG | - | chr1_2:19267586-19267605 | None:intergenic | 50.0% |
| CATCTAAACAAAGGGCAGCC+TGG | - | chr1_2:19267662-19267681 | None:intergenic | 50.0% | |
| GTGTGTGTCCAATTGCACAG+TGG | - | chr1_2:19268084-19268103 | None:intergenic | 50.0% | |
| GCATGTCGGTAAGTCTGTAG+TGG | - | chr1_2:19268200-19268219 | None:intergenic | 50.0% | |
| ! | GATTCAATCTCTGGAGGAGG+AGG | + | chr1_2:19268229-19268248 | Msa0061250:CDS | 50.0% |
| CGTCGTCGTTCAGAATCTAC+TGG | + | chr1_2:19268751-19268770 | Msa0061250:intron | 50.0% | |
| AAAGGCTGCACTTTGCTGCA+TGG | - | chr1_2:19268833-19268852 | None:intergenic | 50.0% | |
| GGTGATGCAACTGAAGATGG+TGG | + | chr1_2:19268979-19268998 | Msa0061250:CDS | 50.0% | |
| ! | TATGCAGGAGGCACAACAAG+AGG | + | chr1_2:19269533-19269552 | Msa0061250:intron | 50.0% |
| GAACTTTGAATGGGGTCGGT+CGG | + | chr1_2:19269683-19269702 | Msa0061250:three_prime_UTR | 50.0% | |
| AACTTTGAATGGGGTCGGTC+GGG | + | chr1_2:19269684-19269703 | Msa0061250:three_prime_UTR | 50.0% | |
| ! | GATGAAGCTTGGGGGTTTTC+TGG | + | chr1_2:19269788-19269807 | Msa0061250:three_prime_UTR | 50.0% |
| AGAAGAACGTGATGCTCACG+TGG | + | chr1_2:19269830-19269849 | Msa0061250:three_prime_UTR | 50.0% | |
| ! | CTATCTTTCGGAGGCATAGG+AGG | - | chr1_2:19269943-19269962 | None:intergenic | 50.0% |
| GGATGCTCTCACTGTCATGC+CGG | + | chr1_2:19260281-19260300 | Msa0061250:CDS | 55.0% | |
| ! | GTGAAGCAGCTTGCTTCTGC+TGG | + | chr1_2:19260462-19260481 | Msa0061250:CDS | 55.0% |
| GCCGCAAGCAAATCATCGCA+AGG | + | chr1_2:19260542-19260561 | Msa0061250:intron | 55.0% | |
| TGAAGCTGCTCAGCATCTCG+AGG | + | chr1_2:19260896-19260915 | Msa0061250:CDS | 55.0% | |
| TGCTCAGCATCTCGAGGTGA+GGG | + | chr1_2:19260902-19260921 | Msa0061250:intron | 55.0% | |
| GCATGGGTATGTGTCCGGTA+CGG | + | chr1_2:19261466-19261485 | Msa0061250:intron | 55.0% | |
| CATGGGTATGTGTCCGGTAC+GGG | + | chr1_2:19261467-19261486 | Msa0061250:intron | 55.0% | |
| ATGGGTATGTGTCCGGTACG+GGG | + | chr1_2:19261468-19261487 | Msa0061250:intron | 55.0% | |
| CGAGAGATAAGGAGTCCCAC+AGG | + | chr1_2:19261744-19261763 | Msa0061250:intron | 55.0% | |
| GAGTATGCCTACCGTACCTG+TGG | - | chr1_2:19261763-19261782 | None:intergenic | 55.0% | |
| ACGGTAGGCATACTCGGTAC+GGG | + | chr1_2:19261768-19261787 | Msa0061250:intron | 55.0% | |
| GCATACTCGGTACGGGTACA+GGG | + | chr1_2:19261775-19261794 | Msa0061250:intron | 55.0% | |
| CGACTGGTATGGGATGCTCA+AGG | - | chr1_2:19261860-19261879 | None:intergenic | 55.0% | |
| ATCCCATACCAGTCGATGCG+AGG | + | chr1_2:19261865-19261884 | Msa0061250:intron | 55.0% | |
| !! | AGCCTCGCATCGACTGGTAT+GGG | - | chr1_2:19261870-19261889 | None:intergenic | 55.0% |
| !! | AAGCCTCGCATCGACTGGTA+TGG | - | chr1_2:19261871-19261890 | None:intergenic | 55.0% |
| TACCAGTCGATGCGAGGCTT+AGG | + | chr1_2:19261871-19261890 | Msa0061250:intron | 55.0% | |
| !! | GCCCGTGTTTCATTGGCTCT+TGG | - | chr1_2:19265428-19265447 | None:intergenic | 55.0% |
| !!! | GGTGTTTTGGAACGTGGAGC+AGG | + | chr1_2:19265925-19265944 | Msa0061250:intron | 55.0% |
| !! | ACAAGATGCCGGAAGTGCTG+AGG | - | chr1_2:19266363-19266382 | None:intergenic | 55.0% |
| ACTGGTAAATCCTGCCGGGA+AGG | + | chr1_2:19267920-19267939 | Msa0061250:CDS | 55.0% | |
| TCTCCAGCCCACTGTGCAAT+TGG | + | chr1_2:19268073-19268092 | Msa0061250:intron | 55.0% | |
| TGTCCAATTGCACAGTGGGC+TGG | - | chr1_2:19268079-19268098 | None:intergenic | 55.0% | |
| ATCGGCGAGGTTACGGAGCA+CGG | - | chr1_2:19260310-19260329 | None:intergenic | 60.0% | |
| CTGCTCAGCATCTCGAGGTG+AGG | + | chr1_2:19260901-19260920 | Msa0061250:intron | 60.0% | |
| AGGAGTCCCACAGGTACGGT+AGG | + | chr1_2:19261753-19261772 | Msa0061250:intron | 60.0% | |
| GGCATACTCGGTACGGGTAC+AGG | + | chr1_2:19261774-19261793 | Msa0061250:intron | 60.0% | |
| ! | TGCCTAAGCCTCGCATCGAC+TGG | - | chr1_2:19261876-19261895 | None:intergenic | 60.0% |
| TGGAACGTGGAGCAGGTGAG+TGG | + | chr1_2:19265932-19265951 | Msa0061250:intron | 60.0% | |
| GTGGAGCAGGTGAGTGGCTT+GGG | + | chr1_2:19265938-19265957 | Msa0061250:intron | 60.0% | |
| GCTGCATGGCCCTCTATCGT+AGG | + | chr1_2:19267592-19267611 | Msa0061250:intron | 60.0% | |
| CGTGGAGCAGGTGAGTGGCT+TGG | + | chr1_2:19265937-19265956 | Msa0061250:intron | 65.0% | |
| AGGTTACGGAGCACGGCGGC+CGG | - | chr1_2:19260303-19260322 | None:intergenic | 70.0% | |
| GGCGAGGTTACGGAGCACGG+CGG | - | chr1_2:19260307-19260326 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 19259917 | 19269996 | 19259917 | ID=Msa0061250;Name=Msa0061250 |
| chr1_2 | mRNA | 19259917 | 19269996 | 19259917 | ID=Msa0061250-mRNA-1;Parent=Msa0061250;Name=Msa0061250-mRNA-1;_AED=0.16;_eAED=0.16;_QI=359|0.89|0.9|1|1|1|20|358|734 |
| chr1_2 | exon | 19259917 | 19260365 | 19259917 | ID=Msa0061250-mRNA-1:exon:7455;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19260450 | 19260506 | 19260450 | ID=Msa0061250-mRNA-1:exon:7456;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19260852 | 19260917 | 19260852 | ID=Msa0061250-mRNA-1:exon:7457;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19263152 | 19263241 | 19263152 | ID=Msa0061250-mRNA-1:exon:7458;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19263326 | 19263445 | 19263326 | ID=Msa0061250-mRNA-1:exon:7459;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19263595 | 19263623 | 19263595 | ID=Msa0061250-mRNA-1:exon:7460;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19263760 | 19263902 | 19263760 | ID=Msa0061250-mRNA-1:exon:7461;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19263990 | 19264084 | 19263990 | ID=Msa0061250-mRNA-1:exon:7462;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19264342 | 19264488 | 19264342 | ID=Msa0061250-mRNA-1:exon:7463;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19264634 | 19264741 | 19264634 | ID=Msa0061250-mRNA-1:exon:7464;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19264889 | 19264980 | 19264889 | ID=Msa0061250-mRNA-1:exon:7465;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19265167 | 19265248 | 19265167 | ID=Msa0061250-mRNA-1:exon:7466;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19265645 | 19265710 | 19265645 | ID=Msa0061250-mRNA-1:exon:7467;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19266315 | 19266430 | 19266315 | ID=Msa0061250-mRNA-1:exon:7468;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19266526 | 19266646 | 19266526 | ID=Msa0061250-mRNA-1:exon:7469;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19267855 | 19268016 | 19267855 | ID=Msa0061250-mRNA-1:exon:7470;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19268206 | 19268334 | 19268206 | ID=Msa0061250-mRNA-1:exon:7471;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19268532 | 19268600 | 19268532 | ID=Msa0061250-mRNA-1:exon:7472;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19268838 | 19269161 | 19268838 | ID=Msa0061250-mRNA-1:exon:7473;Parent=Msa0061250-mRNA-1 |
| chr1_2 | exon | 19269540 | 19269996 | 19269540 | ID=Msa0061250-mRNA-1:exon:7474;Parent=Msa0061250-mRNA-1 |
| chr1_2 | five_prime_UTR | 19259917 | 19260275 | 19259917 | ID=Msa0061250-mRNA-1:five_prime_utr;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19260276 | 19260365 | 19260276 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19260450 | 19260506 | 19260450 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19260852 | 19260917 | 19260852 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19263152 | 19263241 | 19263152 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19263326 | 19263445 | 19263326 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19263595 | 19263623 | 19263595 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19263760 | 19263902 | 19263760 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19263990 | 19264084 | 19263990 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19264342 | 19264488 | 19264342 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19264634 | 19264741 | 19264634 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19264889 | 19264980 | 19264889 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19265167 | 19265248 | 19265167 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19265645 | 19265710 | 19265645 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19266315 | 19266430 | 19266315 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19266526 | 19266646 | 19266526 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19267855 | 19268016 | 19267855 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19268206 | 19268334 | 19268206 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19268532 | 19268600 | 19268532 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19268838 | 19269161 | 19268838 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | CDS | 19269540 | 19269638 | 19269540 | ID=Msa0061250-mRNA-1:cds;Parent=Msa0061250-mRNA-1 |
| chr1_2 | three_prime_UTR | 19269639 | 19269996 | 19269639 | ID=Msa0061250-mRNA-1:three_prime_utr;Parent=Msa0061250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
