AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1401270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401270 MtrunA17_Chr2g0281781 96.184 891 33 1 1 891 1 890 0.0 1767
Msa1401270 MtrunA17_Chr2g0318031 35.682 894 440 30 1 853 1 800 6.35e-120 390
Msa1401270 MtrunA17_Chr1g0187491 38.809 554 248 25 1 509 1 508 7.41e-80 282
Msa1401270 MtrunA17_Chr1g0166471 33.022 536 273 18 1 503 1 483 1.22e-60 224
Msa1401270 MtrunA17_Chr8g0344661 33.784 222 126 4 1 220 1 203 1.10e-31 134
Msa1401270 MtrunA17_Chr3g0128441 26.941 219 123 3 7 219 11 198 8.15e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401270 AT1G61100.1 38.655 877 416 32 1 848 1 784 1.24e-146 454
Msa1401270 AT1G61100.2 38.655 877 415 32 1 848 1 783 1.52e-146 453
Msa1401270 AT4G27430.1 37.080 863 446 30 1 846 1 783 1.10e-124 402
Msa1401270 AT4G27430.2 37.080 863 446 30 1 846 1 783 1.10e-124 402
Msa1401270 AT5G43310.5 35.448 536 235 19 1 507 1 454 1.61e-70 253
Msa1401270 AT5G43310.4 35.448 536 235 19 1 507 1 454 2.29e-70 254
Msa1401270 AT5G43310.3 35.448 536 235 19 1 507 1 454 2.29e-70 254
Msa1401270 AT5G43310.2 35.448 536 235 19 1 507 1 454 4.47e-70 253
Msa1401270 AT3G14172.1 37.037 216 113 3 7 220 7 201 2.49e-34 142
Msa1401270 AT5G43310.1 31.956 363 151 16 159 507 231 511 9.42e-33 137
Msa1401270 AT5G43310.1 60.000 105 41 1 1 104 1 105 8.10e-30 128
Msa1401270 AT3G14172.2 35.047 214 112 3 7 220 7 193 1.06e-28 124
Msa1401270 AT1G17360.1 31.839 223 115 5 1 220 1 189 2.28e-27 120
Msa1401270 AT1G72410.2 31.839 223 122 5 1 220 1 196 1.10e-24 111
Msa1401270 AT1G72410.1 31.839 223 122 5 1 220 1 196 1.17e-24 111
Msa1401270 AT3G14172.3 32.370 173 94 3 50 220 12 163 1.05e-17 89.4

Find 167 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCATCCAACACTGCTTTC+TGG 0.103763 tig0022505:+71449 Msa1401270:CDS
GGCTTTCTGTTTCTAGAAAT+TGG 0.169361 tig0022505:-75048 None:intergenic
CATTTGGAGCATCGCGTTTA+AGG 0.193408 tig0022505:+72490 Msa1401270:CDS
GTTTATTGTTGATAACAATT+TGG 0.222809 tig0022505:+74546 Msa1401270:CDS
AAAAGCATGCAGATGATCTT+TGG 0.249753 tig0022505:+73150 Msa1401270:CDS
AGCTATTATTCTTGTTGTTC+TGG 0.250738 tig0022505:-73271 None:intergenic
CTTTCCCTGATCTTTGTAAC+TGG 0.257701 tig0022505:-74403 None:intergenic
GCATTAATTTCAAGGATTTA+TGG 0.262511 tig0022505:+73123 Msa1401270:CDS
TCCGCAATTTCACGATTCTT+TGG 0.266625 tig0022505:-74301 None:intergenic
TAACCTCTCAAAGGTGGATT+TGG 0.274750 tig0022505:-71476 None:intergenic
GATTTCGCTGCAACGCCTTT+TGG 0.284161 tig0022505:+72359 Msa1401270:CDS
TTTAACAGGAAGATGAAATT+AGG 0.285960 tig0022505:+75237 Msa1401270:intron
GATTCCAGTGATCCTGATTC+AGG 0.296973 tig0022505:+73752 Msa1401270:CDS
ATCATTTGATTTATTGTGTT+TGG 0.297241 tig0022505:-74062 None:intergenic
CAAATACTATAGGCACATTT+GGG 0.300601 tig0022505:-74591 None:intergenic
ATCACCAACCTTCTGTTTGA+TGG 0.301643 tig0022505:-73975 None:intergenic
TCAAATACTATAGGCACATT+TGG 0.314149 tig0022505:-74592 None:intergenic
ATCTTCTGATCCTCTTCCCT+TGG 0.314858 tig0022505:-74521 None:intergenic
CAAATTGACTTTCAATCTGC+TGG 0.325945 tig0022505:-71773 None:intergenic
CTAAAGGTGGATACTCTATT+AGG 0.346591 tig0022505:+71419 Msa1401270:CDS
TCAATAGAAGCTCTTCTATC+AGG 0.350159 tig0022505:-74922 None:intergenic
GATGCAATCGATTGATGTTC+AGG 0.360802 tig0022505:+74195 Msa1401270:CDS
GATGATTCCTTCATGATTCA+AGG 0.363422 tig0022505:+74670 Msa1401270:CDS
GTTCGTGAGAAAATAGCTTC+TGG 0.373823 tig0022505:+71346 Msa1401270:CDS
TATTCTTGTTGTTCTGGTCA+TGG 0.378692 tig0022505:-73265 None:intergenic
CTGTTTCTAGAAATTGGTTC+AGG 0.382494 tig0022505:-75042 None:intergenic
ACTTCATTGAAATCCATGTT+TGG 0.387757 tig0022505:-74277 None:intergenic
TCAACTACATCACTCCAAAA+AGG 0.388918 tig0022505:+73882 Msa1401270:CDS
TCTTCTGATCCTCTTCCCTT+GGG 0.389676 tig0022505:-74520 None:intergenic
AGATGAAATTAGGAAGCAAT+TGG 0.394685 tig0022505:+75247 Msa1401270:CDS
ATCGCACATGGAGTGTGAAC+TGG 0.394964 tig0022505:-70973 None:intergenic
TGGATCATCAGGAATTATAC+TGG 0.395796 tig0022505:+73226 Msa1401270:CDS
AAAACCATACAGAGGTCATT+TGG 0.405408 tig0022505:-74823 None:intergenic
AGCATAATCAAGAATGGTCT+TGG 0.405937 tig0022505:-71145 None:intergenic
AAAGCATGCAGATGATCTTT+GGG 0.406887 tig0022505:+73151 Msa1401270:CDS
TACTTATATCTGTCTTCCAT+TGG 0.407496 tig0022505:-74723 None:intergenic
TCAGATTCACTCCCTGAATC+AGG 0.407557 tig0022505:-73764 None:intergenic
CAGTTAAATGATGCACTTGA+AGG 0.410535 tig0022505:+72197 Msa1401270:intron
GTCGATGTCAGTTGCAATCC+CGG 0.410829 tig0022505:+71809 Msa1401270:CDS
ATTCTTTGAAGGATGATAAG+AGG 0.416935 tig0022505:+73813 Msa1401270:CDS
GGAAGCTTGCATTAATTTCA+AGG 0.419305 tig0022505:+73115 Msa1401270:CDS
AGACTCAAACAATTCTTTGA+AGG 0.423072 tig0022505:+73802 Msa1401270:CDS
TTTGAACCATAGGCTTTCTT+GGG 0.426257 tig0022505:-75077 None:intergenic
ATTCTTGTTGTTCTGGTCAT+GGG 0.427532 tig0022505:-73264 None:intergenic
TGTTAGCACACCTGCAGTAC+TGG 0.428316 tig0022505:+71722 Msa1401270:CDS
TAGGAAGCAATTGGAAGAAA+AGG 0.431957 tig0022505:+75256 Msa1401270:CDS
TATGAAGGCATTTGCTGACT+AGG 0.433103 tig0022505:-73593 None:intergenic
ATATATGGCGGTACGTTGTA+AGG 0.434933 tig0022505:-73554 None:intergenic
GTGTCCCAGTTACAAAGATC+AGG 0.436622 tig0022505:+74398 Msa1401270:CDS
TATACACGTAGTCTTGTTGC+TGG 0.437080 tig0022505:+72423 Msa1401270:CDS
AAACAGAAACAGTTCTGTTA+AGG 0.437731 tig0022505:+75412 Msa1401270:CDS
GGAAACTTGCCGCACACAAA+TGG 0.438828 tig0022505:+72061 Msa1401270:intron
AAGATAGATGCGGCGGAGAC+TGG 0.439609 tig0022505:+74154 Msa1401270:CDS
TGTGTCGGTTTCTACCTTGT+TGG 0.440856 tig0022505:-74767 None:intergenic
GAAAGAAACCTTGTTCTAGT+TGG 0.443676 tig0022505:-71183 None:intergenic
TTCGTGAGAAAATAGCTTCT+GGG 0.443859 tig0022505:+71347 Msa1401270:CDS
ATGGAAGACAGATATAAGTA+TGG 0.447475 tig0022505:+74726 Msa1401270:CDS
TTCCAAACCATACCTTCATC+CGG 0.449240 tig0022505:-71828 None:intergenic
GCTGAAAGAACTGCATCTTC+CGG 0.450013 tig0022505:+75302 Msa1401270:CDS
TCTACAGACAGTATTCCTTC+TGG 0.454903 tig0022505:+73293 Msa1401270:CDS
GGTGTTGGTCGAACCGTGCC+TGG 0.456883 tig0022505:+75323 Msa1401270:CDS
AGGGAAGAGGATCAGAAGAT+TGG 0.458212 tig0022505:+74524 Msa1401270:CDS
GTTAAAGATGAGATCTCTAA+AGG 0.458836 tig0022505:+71403 Msa1401270:CDS
AAGAATGGTCTTGGAATCCA+TGG 0.465531 tig0022505:-71136 None:intergenic
ACTTATATCTGTCTTCCATT+GGG 0.465897 tig0022505:-74722 None:intergenic
CATCTATCTTCAAAAGGCTC+TGG 0.470474 tig0022505:-74141 None:intergenic
CTATCACCATCAAATACTAT+AGG 0.472793 tig0022505:-74601 None:intergenic
TCAGCAGCATAAGTATTTAA+CGG 0.473822 tig0022505:-74487 None:intergenic
TAGGCACATTTGGGGAATCA+TGG 0.474102 tig0022505:-74582 None:intergenic
GCGGCGGAGACTGGTATTGA+TGG 0.474369 tig0022505:+74163 Msa1401270:CDS
ATTGTGACTCAAAGAGATGA+AGG 0.481610 tig0022505:+74334 Msa1401270:CDS
AATGTGCCTATAGTATTTGA+TGG 0.482716 tig0022505:+74595 Msa1401270:CDS
GGAGGATATCCTTGGTATGA+AGG 0.485665 tig0022505:-73608 None:intergenic
TCATTGCAGAAGGTCCATAA+AGG 0.485905 tig0022505:+74007 Msa1401270:CDS
ATGAAGGAATCATCAATGAT+AGG 0.486228 tig0022505:-74661 None:intergenic
AAATGAAAGAGGATCGAAGC+TGG 0.490065 tig0022505:+74357 Msa1401270:CDS
ATAGGCTTTCTTGGGAGAGA+TGG 0.490460 tig0022505:-75069 None:intergenic
GAAGGTAAGGAGGATATCCT+TGG 0.491685 tig0022505:-73616 None:intergenic
ACCTTCAAAATAATATGCAT+TGG 0.495082 tig0022505:+73633 Msa1401270:CDS
ACTCCCTGAATCAGGATCAC+TGG 0.498072 tig0022505:-73756 None:intergenic
CCGCCGCATCTATCTTCAAA+AGG 0.498419 tig0022505:-74147 None:intergenic
ATCTCTCCCAAGAAAGCCTA+TGG 0.499073 tig0022505:+75071 Msa1401270:CDS
CTTCATCAATCTTCTACCCA+TGG 0.499203 tig0022505:+71119 Msa1401270:exon
TTTGCAACGCGATTCAGGAT+TGG 0.499793 tig0022505:+74843 Msa1401270:CDS
TCAAAAGAGCCAAAGGGAAA+AGG 0.504709 tig0022505:+75095 Msa1401270:CDS
GAATGCATTATCAAAGATAG+AGG 0.504852 tig0022505:+74798 Msa1401270:CDS
AAACAGAGCATAATCAAGAA+TGG 0.522503 tig0022505:-71151 None:intergenic
AGGAGAAATGGAAATGAGAG+TGG 0.523974 tig0022505:+73902 Msa1401270:CDS
TATGCATTGGTCTTCTAACA+TGG 0.529226 tig0022505:+73646 Msa1401270:CDS
TGAAAATAACCTCTCAAAGG+TGG 0.529543 tig0022505:-71482 None:intergenic
AAAGTCAATTTCATAGTCCA+TGG 0.536400 tig0022505:-74887 None:intergenic
TGAGTGATGTGTAGTGATAG+TGG 0.538751 tig0022505:-71056 None:intergenic
AGAACTGCATCTTCCGGTGT+TGG 0.542823 tig0022505:+75308 Msa1401270:CDS
GGAGAACCAGAAAGCAGTGT+TGG 0.543361 tig0022505:-71455 None:intergenic
TCATCACAACCCAAGGGAAG+AGG 0.543533 tig0022505:+74511 Msa1401270:CDS
ATTCCAGTGATCCTGATTCA+GGG 0.543913 tig0022505:+73753 Msa1401270:CDS
TAAGGCCATGGCATATGCAT+TGG 0.545284 tig0022505:-73536 None:intergenic
TTTCCCTGATCTTTGTAACT+GGG 0.548685 tig0022505:-74402 None:intergenic
AACCAGAAAGCAGTGTTGGA+TGG 0.552261 tig0022505:-71451 None:intergenic
TCGCACATGGAGTGTGAACT+GGG 0.553572 tig0022505:-70972 None:intergenic
TGCTGATTCATCACAACCCA+AGG 0.554416 tig0022505:+74504 Msa1401270:CDS
TGGATTCTGTTGAAGCCTCA+AGG 0.556644 tig0022505:+74863 Msa1401270:CDS
TTCATAGTCCATGGTCCTTG+AGG 0.556923 tig0022505:-74878 None:intergenic
TCCAAACCATACCTTCATCC+GGG 0.558364 tig0022505:-71827 None:intergenic
AACAGTTCTGTTAAGGTCAG+AGG 0.558395 tig0022505:+75419 Msa1401270:CDS
GGAGCCAAATGACCTCTGTA+TGG 0.559604 tig0022505:+74819 Msa1401270:CDS
TCAGTTGCAATCCCGGATGA+AGG 0.560335 tig0022505:+71816 Msa1401270:CDS
GAGAAATCTCATCATAGGAA+AGG 0.561136 tig0022505:+73701 Msa1401270:CDS
GCTGAGGAAGATGCATCTGA+TGG 0.561920 tig0022505:+74088 Msa1401270:CDS
ATAATCTTTCTGATTCCCAA+TGG 0.561944 tig0022505:+74707 Msa1401270:CDS
GGCGGTACGTTGTAAGGCCA+TGG 0.562859 tig0022505:-73548 None:intergenic
AGCACTACTTCGAAAAGAGC+AGG 0.563412 tig0022505:+72392 Msa1401270:CDS
AGAGATGAAGGAAATGAAAG+AGG 0.564503 tig0022505:+74346 Msa1401270:CDS
ACAAACCTCTCCAGTACTGC+AGG 0.565325 tig0022505:-71732 None:intergenic
CTTGCGTTTCCATTTGTGTG+CGG 0.566813 tig0022505:-72070 None:intergenic
CTTGTTGTTCTGGTCATGGG+CGG 0.570173 tig0022505:-73261 None:intergenic
TGCTAGTTCTGCTCCAAACA+TGG 0.572416 tig0022505:+74264 Msa1401270:CDS
AAGAAAGAAACAAAGACAGC+AGG 0.573481 tig0022505:-71006 None:intergenic
AAACTGACCTTGAATCATGA+AGG 0.574019 tig0022505:-74677 None:intergenic
TTTGCTATTTGATCTTTACC+AGG 0.575386 tig0022505:-75341 None:intergenic
TCCAAAGAATCGTGAAATTG+CGG 0.580291 tig0022505:+74300 Msa1401270:CDS
AGGAAGATGCATCTGATGGA+GGG 0.584311 tig0022505:+74092 Msa1401270:CDS
ACAAAGATCAGGGAAAGTAT+TGG 0.586644 tig0022505:+74409 Msa1401270:CDS
TATTGAAAATAACCTCTCAA+AGG 0.587430 tig0022505:-71485 None:intergenic
TAAATCAAATGATGCTGCTG+AGG 0.589260 tig0022505:+74072 Msa1401270:CDS
CTATGGTTCAAAAGAGCCAA+AGG 0.589709 tig0022505:+75088 Msa1401270:CDS
TATTTGATCTTTACCAGGCA+CGG 0.589815 tig0022505:-75336 None:intergenic
GAAACCATCAAACAGAAGGT+TGG 0.595462 tig0022505:+73971 Msa1401270:CDS
TGAAGAAACCATCAAACAGA+AGG 0.599349 tig0022505:+73967 Msa1401270:CDS
TGTTGAAGCCTCAAGGACCA+TGG 0.604282 tig0022505:+74870 Msa1401270:CDS
TCTCCAAATCCACCTTTGAG+AGG 0.606329 tig0022505:+71473 Msa1401270:CDS
GTGCTATTCGAGACTCCAAA+AGG 0.607180 tig0022505:-72374 None:intergenic
AGGAGTTGACACTAAAGAAG+AGG 0.608965 tig0022505:+72217 Msa1401270:CDS
CAGCAAATGCCTTCATACCA+AGG 0.609523 tig0022505:+73599 Msa1401270:CDS
TATGGTTCAAAAGAGCCAAA+GGG 0.610400 tig0022505:+75089 Msa1401270:CDS
CAGAAAGCAGTGTTGGATGG+AGG 0.610749 tig0022505:-71448 None:intergenic
AACTCACACCAACTAGAACA+AGG 0.613594 tig0022505:+71175 Msa1401270:CDS
GAGGTTAAGTGATTCTGCAA+AGG 0.615197 tig0022505:+72093 Msa1401270:CDS
TAGGCCATGGTGAATCTACA+AGG 0.615491 tig0022505:+75512 Msa1401270:three_prime_UTR
TGCACTTGAATCATTGCAGA+AGG 0.618725 tig0022505:+73997 Msa1401270:CDS
GCAATTGGAAGAAAAGGCGA+TGG 0.619942 tig0022505:+75262 Msa1401270:CDS
TTTGTGTTGAGAAACTCTGA+AGG 0.622804 tig0022505:+74226 Msa1401270:CDS
ACTTCGAAAAGAGCAGGCAA+TGG 0.623572 tig0022505:+72398 Msa1401270:CDS
ATGCATTGGTCTTCTAACAT+GGG 0.624478 tig0022505:+73647 Msa1401270:CDS
GAGGAAGATGCATCTGATGG+AGG 0.626415 tig0022505:+74091 Msa1401270:CDS
GATCCAGAAAATGAGAGTGC+TGG 0.627508 tig0022505:-73209 None:intergenic
GCACACCTGCAGTACTGGAG+AGG 0.629725 tig0022505:+71727 Msa1401270:CDS
TGTCCCAGTTACAAAGATCA+GGG 0.630317 tig0022505:+74399 Msa1401270:CDS
ATATGCCAATGCATATGCCA+TGG 0.630372 tig0022505:+73531 Msa1401270:CDS
AAAAGGCGATGGAACGACAG+AGG 0.633665 tig0022505:+75273 Msa1401270:CDS
AGATGTGAACTTATCGCACA+TGG 0.643303 tig0022505:+73499 Msa1401270:intron
TGAAGATTATACATATATGG+CGG 0.644615 tig0022505:-73566 None:intergenic
GGAATATGAAGAATCGCACA+TGG 0.648565 tig0022505:-70985 None:intergenic
AGGCACGGTTCGACCAACAC+CGG 0.654070 tig0022505:-75321 None:intergenic
CGCACACAAATGGAAACGCA+AGG 0.655355 tig0022505:+72071 Msa1401270:CDS
AAAGATGAGATCTCTAAAGG+TGG 0.655907 tig0022505:+71406 Msa1401270:CDS
TTTACCTTGTAGATTCACCA+TGG 0.665569 tig0022505:-75516 None:intergenic
AAATACTATAGGCACATTTG+GGG 0.667223 tig0022505:-74590 None:intergenic
AGAATGGTCTTGGAATCCAT+GGG 0.669793 tig0022505:-71135 None:intergenic
AATTTGAGATGAGAAATGAA+AGG 0.677579 tig0022505:-71379 None:intergenic
TAGTGTCATTCAGTTCAATG+TGG 0.678687 tig0022505:+75465 Msa1401270:three_prime_UTR
AGATCTAACATCTTCCAACA+AGG 0.687176 tig0022505:+74753 Msa1401270:CDS
CGCGTTGCAAAACCATACAG+AGG 0.690263 tig0022505:-74831 None:intergenic
AGATTGATGAAGAACAACGT+TGG 0.694386 tig0022505:-71108 None:intergenic
GCTGATTCATCACAACCCAA+GGG 0.696947 tig0022505:+74505 Msa1401270:CDS
CCAGAAAATGAGAGTGCTGG+TGG 0.704940 tig0022505:-73206 None:intergenic
ACACAAATGGAAACGCAAGG+AGG 0.763676 tig0022505:+72074 Msa1401270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTATAAATAAACTTTT+AGG + tig0022505:75593-75612 Msa1401270:three_prime_UTR 10.0%
!! ATAAGAGAATATAACAAAAT+GGG - tig0022505:71215-71234 None:intergenic 15.0%
!! AATAAGAGAATATAACAAAA+TGG - tig0022505:71216-71235 None:intergenic 15.0%
!!! TTTTTCACAATTTACTTATT+GGG + tig0022505:71264-71283 Msa1401270:intron 15.0%
!!! ACTTTTTTGATTTAATCTTT+TGG + tig0022505:71514-71533 Msa1401270:intron 15.0%
!!! AATTGTGTTTTTTATGTTAA+AGG + tig0022505:72614-72633 Msa1401270:intron 15.0%
!!! TTTTGAAGATTATACATATA+TGG - tig0022505:73572-73591 None:intergenic 15.0%
!!! GTATTGTGAATTTTTTATTA+TGG + tig0022505:75117-75136 Msa1401270:intron 15.0%
!!! CTTTTTCACAATTTACTTAT+TGG + tig0022505:71263-71282 Msa1401270:intron 20.0%
!! CAATCATATAATTGAATCAA+TGG - tig0022505:71590-71609 None:intergenic 20.0%
!!! GACTTATTTAAGTTGTTTTA+TGG + tig0022505:71609-71628 Msa1401270:intron 20.0%
!!! ATGCAAAATAAATGTGTTTT+TGG + tig0022505:71646-71665 Msa1401270:intron 20.0%
!!! TGCAAAATAAATGTGTTTTT+GGG + tig0022505:71647-71666 Msa1401270:intron 20.0%
!!! TTTTTTTTGATAGATTTGTG+CGG + tig0022505:71697-71716 Msa1401270:intron 20.0%
!!! ACATAGATTCATTGATTTAT+AGG - tig0022505:71954-71973 None:intergenic 20.0%
!! AATAATCAATAGAGATCATT+AGG - tig0022505:72149-72168 None:intergenic 20.0%
!! TGAATTCAATATATGTTGAT+TGG + tig0022505:73015-73034 Msa1401270:intron 20.0%
!! TTGAAACTAATTCTAAATCT+TGG + tig0022505:73076-73095 Msa1401270:intron 20.0%
!! TTTGTAGAAAACAAAAAAGA+CGG + tig0022505:73329-73348 Msa1401270:CDS 20.0%
!! TACAATTAAGGTAAAAGAAA+AGG - tig0022505:73374-73393 None:intergenic 20.0%
!! AAAAAATCAAAGATTTGACT+TGG - tig0022505:73433-73452 None:intergenic 20.0%
!!! ATCATTTGATTTATTGTGTT+TGG - tig0022505:74065-74084 None:intergenic 20.0%
!!! GTTTATTGTTGATAACAATT+TGG + tig0022505:74546-74565 Msa1401270:CDS 20.0%
!!! TCTATTTTGAGTAACTATAT+AGG - tig0022505:75639-75658 None:intergenic 20.0%
!! AATTTGAGATGAGAAATGAA+AGG - tig0022505:71382-71401 None:intergenic 25.0%
! TATTGAAAATAACCTCTCAA+AGG - tig0022505:71488-71507 None:intergenic 25.0%
!! TGTTTCTGTATCAATTGATT+AGG + tig0022505:71877-71896 Msa1401270:intron 25.0%
! TGTATCAATTGATTAGGTTT+AGG + tig0022505:71883-71902 Msa1401270:intron 25.0%
!!! AATTAACAAGTGTTGTTTCT+AGG - tig0022505:71924-71943 None:intergenic 25.0%
!! TAAATTTTCCATTGTGTATC+AGG + tig0022505:72040-72059 Msa1401270:intron 25.0%
! TAATGAACTAGTCAAACAAA+GGG - tig0022505:72300-72319 None:intergenic 25.0%
!! GTATATTTTGCAAATGCATT+TGG + tig0022505:72474-72493 Msa1401270:CDS 25.0%
! CTTATATGGATACTGTAAAT+TGG + tig0022505:72543-72562 Msa1401270:intron 25.0%
!! CTTTTATGTCTGAAAAGAAA+GGG - tig0022505:72711-72730 None:intergenic 25.0%
!! ACTTTTATGTCTGAAAAGAA+AGG - tig0022505:72712-72731 None:intergenic 25.0%
! AATTTCACAATCTACAAAGT+AGG - tig0022505:72751-72770 None:intergenic 25.0%
! TGTGAAATTTCACTTATCTA+AGG + tig0022505:72762-72781 Msa1401270:intron 25.0%
! GTGAAATTTCACTTATCTAA+GGG + tig0022505:72763-72782 Msa1401270:intron 25.0%
! TGAAATTTCACTTATCTAAG+GGG + tig0022505:72764-72783 Msa1401270:intron 25.0%
! AAATTTCACCCTAATCTAAT+AGG - tig0022505:72947-72966 None:intergenic 25.0%
!! ATTCAATATATGTTGATTGG+TGG + tig0022505:73018-73037 Msa1401270:intron 25.0%
! GCATTAATTTCAAGGATTTA+TGG + tig0022505:73123-73142 Msa1401270:CDS 25.0%
! CAGACTTCATAATACAATTA+AGG - tig0022505:73386-73405 None:intergenic 25.0%
!! TTTTTATAGATTGCACACAA+TGG + tig0022505:73448-73467 Msa1401270:intron 25.0%
! TGAAGATTATACATATATGG+CGG - tig0022505:73569-73588 None:intergenic 25.0%
!!! ATATTATTTTGAAGGTAAGG+AGG - tig0022505:73629-73648 None:intergenic 25.0%
!!! TGCATATTATTTTGAAGGTA+AGG - tig0022505:73632-73651 None:intergenic 25.0%
! ACCTTCAAAATAATATGCAT+TGG + tig0022505:73633-73652 Msa1401270:CDS 25.0%
!!! ACCAATGCATATTATTTTGA+AGG - tig0022505:73637-73656 None:intergenic 25.0%
! AAAAAGAGAAATCTCATCAT+AGG + tig0022505:73696-73715 Msa1401270:CDS 25.0%
! ATAAGAGGAAAAAAAACAGA+AGG + tig0022505:73828-73847 Msa1401270:CDS 25.0%
! TTTAACAGGAAGATGAAATT+AGG + tig0022505:75237-75256 Msa1401270:intron 25.0%
! AGGAATTTAGAAAAACTTGT+CGG + tig0022505:75439-75458 Msa1401270:exon 25.0%
! TCATAAAAACAAAGCAACAA+AGG - tig0022505:75736-75755 None:intergenic 25.0%
AAACAGAGCATAATCAAGAA+TGG - tig0022505:71154-71173 None:intergenic 30.0%
! ATTTTGCAGATTTGAGCTTT+TGG + tig0022505:71309-71328 Msa1401270:intron 30.0%
!!! TTTGAGCTTTTGGTGTTTAA+TGG + tig0022505:71319-71338 Msa1401270:CDS 30.0%
GTTAAAGATGAGATCTCTAA+AGG + tig0022505:71403-71422 Msa1401270:CDS 30.0%
TAGACTGACATATCATGATT+AGG - tig0022505:72001-72020 None:intergenic 30.0%
CTAATGAACTAGTCAAACAA+AGG - tig0022505:72301-72320 None:intergenic 30.0%
! CTTTGTTTGACTAGTTCATT+AGG + tig0022505:72299-72318 Msa1401270:intron 30.0%
ATTCAATTGCTGCAATGTTA+AGG + tig0022505:72337-72356 Msa1401270:intron 30.0%
ACAACCTACAAGTTCTTATA+TGG + tig0022505:72529-72548 Msa1401270:intron 30.0%
GTATCCATATAAGAACTTGT+AGG - tig0022505:72536-72555 None:intergenic 30.0%
AGAGAACTAACATCAAAAGT+TGG - tig0022505:72803-72822 None:intergenic 30.0%
TACTAAAAATTCGCACGAAA+AGG - tig0022505:72857-72876 None:intergenic 30.0%
TTAGTTTCAAACTCTACTGA+AGG - tig0022505:73066-73085 None:intergenic 30.0%
TCTTGGTATTCAATGTATGT+AGG + tig0022505:73093-73112 Msa1401270:intron 30.0%
CTTGGTATTCAATGTATGTA+GGG + tig0022505:73094-73113 Msa1401270:intron 30.0%
!! AGCTATTATTCTTGTTGTTC+TGG - tig0022505:73274-73293 None:intergenic 30.0%
AGACTCAAACAATTCTTTGA+AGG + tig0022505:73802-73821 Msa1401270:CDS 30.0%
! ATTCTTTGAAGGATGATAAG+AGG + tig0022505:73813-73832 Msa1401270:CDS 30.0%
AAAAACAGAAGGAAATCATC+TGG + tig0022505:73839-73858 Msa1401270:CDS 30.0%
! TCATTTCCATTTCTCCTTTT+TGG - tig0022505:73899-73918 None:intergenic 30.0%
ACTTCATTGAAATCCATGTT+TGG - tig0022505:74280-74299 None:intergenic 30.0%
! GGATCATCAAGTTCAATTTT+TGG - tig0022505:74469-74488 None:intergenic 30.0%
TCAGCAGCATAAGTATTTAA+CGG - tig0022505:74490-74509 None:intergenic 30.0%
AAATACTATAGGCACATTTG+GGG - tig0022505:74593-74612 None:intergenic 30.0%
CAAATACTATAGGCACATTT+GGG - tig0022505:74594-74613 None:intergenic 30.0%
TCAAATACTATAGGCACATT+TGG - tig0022505:74595-74614 None:intergenic 30.0%
AATGTGCCTATAGTATTTGA+TGG + tig0022505:74595-74614 Msa1401270:CDS 30.0%
CTATCACCATCAAATACTAT+AGG - tig0022505:74604-74623 None:intergenic 30.0%
ATGAAGGAATCATCAATGAT+AGG - tig0022505:74664-74683 None:intergenic 30.0%
ATAATCTTTCTGATTCCCAA+TGG + tig0022505:74707-74726 Msa1401270:CDS 30.0%
ACTTATATCTGTCTTCCATT+GGG - tig0022505:74725-74744 None:intergenic 30.0%
TACTTATATCTGTCTTCCAT+TGG - tig0022505:74726-74745 None:intergenic 30.0%
ATGGAAGACAGATATAAGTA+TGG + tig0022505:74726-74745 Msa1401270:CDS 30.0%
! TGCATTCTTTTCTTTTGTGT+CGG - tig0022505:74785-74804 None:intergenic 30.0%
GAATGCATTATCAAAGATAG+AGG + tig0022505:74798-74817 Msa1401270:CDS 30.0%
AAAGTCAATTTCATAGTCCA+TGG - tig0022505:74890-74909 None:intergenic 30.0%
!! ATTTATGTGTGCTGTTTAAC+AGG + tig0022505:75223-75242 Msa1401270:intron 30.0%
AGATGAAATTAGGAAGCAAT+TGG + tig0022505:75247-75266 Msa1401270:CDS 30.0%
!! TTTGCTATTTGATCTTTACC+AGG - tig0022505:75344-75363 None:intergenic 30.0%
AAACAGAAACAGTTCTGTTA+AGG + tig0022505:75412-75431 Msa1401270:CDS 30.0%
! ATGCAGCTTTTATAAGGTAT+AGG + tig0022505:75493-75512 Msa1401270:three_prime_UTR 30.0%
AAGAAAGAAACAAAGACAGC+AGG - tig0022505:71009-71028 None:intergenic 35.0%
AGATTGATGAAGAACAACGT+TGG - tig0022505:71111-71130 None:intergenic 35.0%
AGCATAATCAAGAATGGTCT+TGG - tig0022505:71148-71167 None:intergenic 35.0%
GAAAGAAACCTTGTTCTAGT+TGG - tig0022505:71186-71205 None:intergenic 35.0%
TTCGTGAGAAAATAGCTTCT+GGG + tig0022505:71347-71366 Msa1401270:CDS 35.0%
! AAAGATGAGATCTCTAAAGG+TGG + tig0022505:71406-71425 Msa1401270:CDS 35.0%
CTAAAGGTGGATACTCTATT+AGG + tig0022505:71419-71438 Msa1401270:CDS 35.0%
TGAAAATAACCTCTCAAAGG+TGG - tig0022505:71485-71504 None:intergenic 35.0%
!! TCTGCTGGATTTCTTTTTCA+AGG - tig0022505:71761-71780 None:intergenic 35.0%
! CAAATTGACTTTCAATCTGC+TGG - tig0022505:71776-71795 None:intergenic 35.0%
GACATATCATGATTAGGTGA+CGG - tig0022505:71995-72014 None:intergenic 35.0%
CAGTTAAATGATGCACTTGA+AGG + tig0022505:72197-72216 Msa1401270:intron 35.0%
TTGCAGCAATTGAATGTGTT+AGG - tig0022505:72332-72351 None:intergenic 35.0%
GCCTCAGTTCTTACTAAATA+TGG + tig0022505:72572-72591 Msa1401270:intron 35.0%
GCCATATTTAGTAAGAACTG+AGG - tig0022505:72576-72595 None:intergenic 35.0%
!! AAAAAGTGCTCTCTAGAAAC+TGG - tig0022505:72672-72691 None:intergenic 35.0%
ATGTCTGAAAAGAAAGGGAA+AGG - tig0022505:72706-72725 None:intergenic 35.0%
TTTCACTTATCTAAGGGGAT+TGG + tig0022505:72769-72788 Msa1401270:intron 35.0%
ATGTGTGTGCCTATTAGATT+AGG + tig0022505:72935-72954 Msa1401270:intron 35.0%
TGTGTGTGCCTATTAGATTA+GGG + tig0022505:72936-72955 Msa1401270:intron 35.0%
GGAAGCTTGCATTAATTTCA+AGG + tig0022505:73115-73134 Msa1401270:CDS 35.0%
! AAAAGCATGCAGATGATCTT+TGG + tig0022505:73150-73169 Msa1401270:CDS 35.0%
AAAGCATGCAGATGATCTTT+GGG + tig0022505:73151-73170 Msa1401270:CDS 35.0%
TGGATCATCAGGAATTATAC+TGG + tig0022505:73226-73245 Msa1401270:CDS 35.0%
!! ATTCTTGTTGTTCTGGTCAT+GGG - tig0022505:73267-73286 None:intergenic 35.0%
!! TATTCTTGTTGTTCTGGTCA+TGG - tig0022505:73268-73287 None:intergenic 35.0%
!! TATGCATTGGTCTTCTAACA+TGG + tig0022505:73646-73665 Msa1401270:CDS 35.0%
!! ATGCATTGGTCTTCTAACAT+GGG + tig0022505:73647-73666 Msa1401270:CDS 35.0%
!!! TTCTCTTTTTTAGTTGCTCG+TGG - tig0022505:73686-73705 None:intergenic 35.0%
GAGAAATCTCATCATAGGAA+AGG + tig0022505:73701-73720 Msa1401270:CDS 35.0%
TCAACTACATCACTCCAAAA+AGG + tig0022505:73882-73901 Msa1401270:CDS 35.0%
ATCACTCCAAAAAGGAGAAA+TGG + tig0022505:73890-73909 Msa1401270:CDS 35.0%
TGAAGAAACCATCAAACAGA+AGG + tig0022505:73967-73986 Msa1401270:CDS 35.0%
TAAATCAAATGATGCTGCTG+AGG + tig0022505:74072-74091 Msa1401270:CDS 35.0%
TTTGTGTTGAGAAACTCTGA+AGG + tig0022505:74226-74245 Msa1401270:CDS 35.0%
TCCAAAGAATCGTGAAATTG+CGG + tig0022505:74300-74319 Msa1401270:CDS 35.0%
ATTGTGACTCAAAGAGATGA+AGG + tig0022505:74334-74353 Msa1401270:CDS 35.0%
AGAGATGAAGGAAATGAAAG+AGG + tig0022505:74346-74365 Msa1401270:CDS 35.0%
TTTCCCTGATCTTTGTAACT+GGG - tig0022505:74405-74424 None:intergenic 35.0%
! ACAAAGATCAGGGAAAGTAT+TGG + tig0022505:74409-74428 Msa1401270:CDS 35.0%
GATGATTCCTTCATGATTCA+AGG + tig0022505:74670-74689 Msa1401270:CDS 35.0%
AAACTGACCTTGAATCATGA+AGG - tig0022505:74680-74699 None:intergenic 35.0%
AGATCTAACATCTTCCAACA+AGG + tig0022505:74753-74772 Msa1401270:CDS 35.0%
AAAACCATACAGAGGTCATT+TGG - tig0022505:74826-74845 None:intergenic 35.0%
TCAATAGAAGCTCTTCTATC+AGG - tig0022505:74925-74944 None:intergenic 35.0%
!! CTGTTTCTAGAAATTGGTTC+AGG - tig0022505:75045-75064 None:intergenic 35.0%
!! GGCTTTCTGTTTCTAGAAAT+TGG - tig0022505:75051-75070 None:intergenic 35.0%
TTTGAACCATAGGCTTTCTT+GGG - tig0022505:75080-75099 None:intergenic 35.0%
! TTTTGAACCATAGGCTTTCT+TGG - tig0022505:75081-75100 None:intergenic 35.0%
TATGGTTCAAAAGAGCCAAA+GGG + tig0022505:75089-75108 Msa1401270:CDS 35.0%
! TTCACAATACCTTTTCCCTT+TGG - tig0022505:75107-75126 None:intergenic 35.0%
TAGGAAGCAATTGGAAGAAA+AGG + tig0022505:75256-75275 Msa1401270:CDS 35.0%
TATTTGATCTTTACCAGGCA+CGG - tig0022505:75339-75358 None:intergenic 35.0%
! TAGTGTCATTCAGTTCAATG+TGG + tig0022505:75465-75484 Msa1401270:three_prime_UTR 35.0%
! GATGCAATGCAGCTTTTATA+AGG + tig0022505:75487-75506 Msa1401270:three_prime_UTR 35.0%
! CTTTTATAAGGTATAGGCCA+TGG + tig0022505:75499-75518 Msa1401270:three_prime_UTR 35.0%
TTTACCTTGTAGATTCACCA+TGG - tig0022505:75519-75538 None:intergenic 35.0%
GGAATATGAAGAATCGCACA+TGG - tig0022505:70988-71007 None:intergenic 40.0%
TGAGTGATGTGTAGTGATAG+TGG - tig0022505:71059-71078 None:intergenic 40.0%
CTTCATCAATCTTCTACCCA+TGG + tig0022505:71119-71138 Msa1401270:exon 40.0%
! AGAATGGTCTTGGAATCCAT+GGG - tig0022505:71138-71157 None:intergenic 40.0%
! AAGAATGGTCTTGGAATCCA+TGG - tig0022505:71139-71158 None:intergenic 40.0%
AACTCACACCAACTAGAACA+AGG + tig0022505:71175-71194 Msa1401270:CDS 40.0%
GTTCGTGAGAAAATAGCTTC+TGG + tig0022505:71346-71365 Msa1401270:CDS 40.0%
! TAACCTCTCAAAGGTGGATT+TGG - tig0022505:71479-71498 None:intergenic 40.0%
TTCCAAACCATACCTTCATC+CGG - tig0022505:71831-71850 None:intergenic 40.0%
GCAAGTTTCCTGATACACAA+TGG - tig0022505:72051-72070 None:intergenic 40.0%
GAGGTTAAGTGATTCTGCAA+AGG + tig0022505:72093-72112 Msa1401270:CDS 40.0%
AGGAGTTGACACTAAAGAAG+AGG + tig0022505:72217-72236 Msa1401270:CDS 40.0%
!! TATACACGTAGTCTTGTTGC+TGG + tig0022505:72423-72442 Msa1401270:CDS 40.0%
! ATCGCGTTTAAGGTATGAAC+TGG + tig0022505:72500-72519 Msa1401270:intron 40.0%
TCTCATTCCTTGCGAATCTA+AGG + tig0022505:72820-72839 Msa1401270:intron 40.0%
CAGTTATCCTTAGATTCGCA+AGG - tig0022505:72830-72849 None:intergenic 40.0%
ACTCTACTGAAGGTTTCATC+TGG - tig0022505:73056-73075 None:intergenic 40.0%
! CTCTCATTTTCTGGATCATC+AGG + tig0022505:73215-73234 Msa1401270:CDS 40.0%
TCTACAGACAGTATTCCTTC+TGG + tig0022505:73293-73312 Msa1401270:CDS 40.0%
AGATGTGAACTTATCGCACA+TGG + tig0022505:73499-73518 Msa1401270:intron 40.0%
ATATGCCAATGCATATGCCA+TGG + tig0022505:73531-73550 Msa1401270:CDS 40.0%
ATATATGGCGGTACGTTGTA+AGG - tig0022505:73557-73576 None:intergenic 40.0%
!! TATGAAGGCATTTGCTGACT+AGG - tig0022505:73596-73615 None:intergenic 40.0%
ATTCCAGTGATCCTGATTCA+GGG + tig0022505:73753-73772 Msa1401270:CDS 40.0%
AGGAGAAATGGAAATGAGAG+TGG + tig0022505:73902-73921 Msa1401270:CDS 40.0%
GAAACCATCAAACAGAAGGT+TGG + tig0022505:73971-73990 Msa1401270:CDS 40.0%
ATCACCAACCTTCTGTTTGA+TGG - tig0022505:73978-73997 None:intergenic 40.0%
TGCACTTGAATCATTGCAGA+AGG + tig0022505:73997-74016 Msa1401270:CDS 40.0%
TCATTGCAGAAGGTCCATAA+AGG + tig0022505:74007-74026 Msa1401270:CDS 40.0%
GTCCATAAAGGTGAAAAACG+TGG + tig0022505:74019-74038 Msa1401270:CDS 40.0%
! TGCCACGTTTTTCACCTTTA+TGG - tig0022505:74024-74043 None:intergenic 40.0%
GAGGGAACAAAAATGAGAAC+TGG + tig0022505:74110-74129 Msa1401270:CDS 40.0%
CATCTATCTTCAAAAGGCTC+TGG - tig0022505:74144-74163 None:intergenic 40.0%
!! GAGCCTTTTGAAGATAGATG+CGG + tig0022505:74144-74163 Msa1401270:CDS 40.0%
GATGCAATCGATTGATGTTC+AGG + tig0022505:74195-74214 Msa1401270:CDS 40.0%
TCCGCAATTTCACGATTCTT+TGG - tig0022505:74304-74323 None:intergenic 40.0%
AAATGAAAGAGGATCGAAGC+TGG + tig0022505:74357-74376 Msa1401270:CDS 40.0%
TGTCCCAGTTACAAAGATCA+GGG + tig0022505:74399-74418 Msa1401270:CDS 40.0%
CTTTCCCTGATCTTTGTAAC+TGG - tig0022505:74406-74425 None:intergenic 40.0%
!!! CTTTGGCTCTTTTGAACCAT+AGG - tig0022505:75090-75109 None:intergenic 40.0%
CTATGGTTCAAAAGAGCCAA+AGG + tig0022505:75088-75107 Msa1401270:CDS 40.0%
TCAAAAGAGCCAAAGGGAAA+AGG + tig0022505:75095-75114 Msa1401270:CDS 40.0%
AACAGTTCTGTTAAGGTCAG+AGG + tig0022505:75419-75438 Msa1401270:CDS 40.0%
! AACCAGAAAGCAGTGTTGGA+TGG - tig0022505:71454-71473 None:intergenic 45.0%
TCTCCAAATCCACCTTTGAG+AGG + tig0022505:71473-71492 Msa1401270:CDS 45.0%
TCCAAACCATACCTTCATCC+GGG - tig0022505:71830-71849 None:intergenic 45.0%
CTTGCGTTTCCATTTGTGTG+CGG - tig0022505:72073-72092 None:intergenic 45.0%
ACACAAATGGAAACGCAAGG+AGG + tig0022505:72074-72093 Msa1401270:CDS 45.0%
! GTGCTATTCGAGACTCCAAA+AGG - tig0022505:72377-72396 None:intergenic 45.0%
AGCACTACTTCGAAAAGAGC+AGG + tig0022505:72392-72411 Msa1401270:CDS 45.0%
ACTTCGAAAAGAGCAGGCAA+TGG + tig0022505:72398-72417 Msa1401270:CDS 45.0%
!! CATTTGGAGCATCGCGTTTA+AGG + tig0022505:72490-72509 Msa1401270:CDS 45.0%
CACTTATCTAAGGGGATTGG+AGG + tig0022505:72772-72791 Msa1401270:intron 45.0%
TCTGAATGTCATCCTGCACA+CGG + tig0022505:72887-72906 Msa1401270:intron 45.0%
CATTAAAATGCACCGTGTGC+AGG - tig0022505:72902-72921 None:intergenic 45.0%
CTGAAGGTTTCATCTGGTAG+AGG - tig0022505:73050-73069 None:intergenic 45.0%
! GATCCAGAAAATGAGAGTGC+TGG - tig0022505:73212-73231 None:intergenic 45.0%
! AATGCATTTTCGTCGCCAGA+AGG - tig0022505:73311-73330 None:intergenic 45.0%
TAAGGCCATGGCATATGCAT+TGG - tig0022505:73539-73558 None:intergenic 45.0%
CAGCAAATGCCTTCATACCA+AGG + tig0022505:73599-73618 Msa1401270:CDS 45.0%
GGAGGATATCCTTGGTATGA+AGG - tig0022505:73611-73630 None:intergenic 45.0%
GAAGGTAAGGAGGATATCCT+TGG - tig0022505:73619-73638 None:intergenic 45.0%
GATTCCAGTGATCCTGATTC+AGG + tig0022505:73752-73771 Msa1401270:CDS 45.0%
TCAGATTCACTCCCTGAATC+AGG - tig0022505:73767-73786 None:intergenic 45.0%
AGGAAGATGCATCTGATGGA+GGG + tig0022505:74092-74111 Msa1401270:CDS 45.0%
!! CCTTTTGAAGATAGATGCGG+CGG + tig0022505:74147-74166 Msa1401270:CDS 45.0%
!! TGCTAGTTCTGCTCCAAACA+TGG + tig0022505:74264-74283 Msa1401270:CDS 45.0%
GTGTCCCAGTTACAAAGATC+AGG + tig0022505:74398-74417 Msa1401270:CDS 45.0%
!! TGCTGATTCATCACAACCCA+AGG + tig0022505:74504-74523 Msa1401270:CDS 45.0%
! GCTGATTCATCACAACCCAA+GGG + tig0022505:74505-74524 Msa1401270:CDS 45.0%
TCTTCTGATCCTCTTCCCTT+GGG - tig0022505:74523-74542 None:intergenic 45.0%
ATCTTCTGATCCTCTTCCCT+TGG - tig0022505:74524-74543 None:intergenic 45.0%
AGGGAAGAGGATCAGAAGAT+TGG + tig0022505:74524-74543 Msa1401270:CDS 45.0%
TAGGCACATTTGGGGAATCA+TGG - tig0022505:74585-74604 None:intergenic 45.0%
!! TGTGTCGGTTTCTACCTTGT+TGG - tig0022505:74770-74789 None:intergenic 45.0%
!! ATGGTTTTGCAACGCGATTC+AGG + tig0022505:74838-74857 Msa1401270:CDS 45.0%
TTTGCAACGCGATTCAGGAT+TGG + tig0022505:74843-74862 Msa1401270:CDS 45.0%
TGGATTCTGTTGAAGCCTCA+AGG + tig0022505:74863-74882 Msa1401270:CDS 45.0%
TTCATAGTCCATGGTCCTTG+AGG - tig0022505:74881-74900 None:intergenic 45.0%
!!! TTGATCGCGCTGGTTTTCTT+TGG - tig0022505:74991-75010 None:intergenic 45.0%
ATAGGCTTTCTTGGGAGAGA+TGG - tig0022505:75072-75091 None:intergenic 45.0%
ATCTCTCCCAAGAAAGCCTA+TGG + tig0022505:75071-75090 Msa1401270:CDS 45.0%
GCAATTGGAAGAAAAGGCGA+TGG + tig0022505:75262-75281 Msa1401270:CDS 45.0%
GCTGAAAGAACTGCATCTTC+CGG + tig0022505:75302-75321 Msa1401270:CDS 45.0%
TAGGCCATGGTGAATCTACA+AGG + tig0022505:75512-75531 Msa1401270:three_prime_UTR 45.0%
TCGCACATGGAGTGTGAACT+GGG - tig0022505:70975-70994 None:intergenic 50.0%
ATCGCACATGGAGTGTGAAC+TGG - tig0022505:70976-70995 None:intergenic 50.0%
! CAGAAAGCAGTGTTGGATGG+AGG - tig0022505:71451-71470 None:intergenic 50.0%
CTCCATCCAACACTGCTTTC+TGG + tig0022505:71449-71468 Msa1401270:CDS 50.0%
GGAGAACCAGAAAGCAGTGT+TGG - tig0022505:71458-71477 None:intergenic 50.0%
TGTTAGCACACCTGCAGTAC+TGG + tig0022505:71722-71741 Msa1401270:CDS 50.0%
ACAAACCTCTCCAGTACTGC+AGG - tig0022505:71735-71754 None:intergenic 50.0%
GTCGATGTCAGTTGCAATCC+CGG + tig0022505:71809-71828 Msa1401270:CDS 50.0%
TCAGTTGCAATCCCGGATGA+AGG + tig0022505:71816-71835 Msa1401270:CDS 50.0%
TGCAATCCCGGATGAAGGTA+TGG + tig0022505:71821-71840 Msa1401270:intron 50.0%
! TCCCGGATGAAGGTATGGTT+TGG + tig0022505:71826-71845 Msa1401270:intron 50.0%
GGAAACTTGCCGCACACAAA+TGG + tig0022505:72061-72080 Msa1401270:intron 50.0%
CGCACACAAATGGAAACGCA+AGG + tig0022505:72071-72090 Msa1401270:CDS 50.0%
! GATTTCGCTGCAACGCCTTT+TGG + tig0022505:72359-72378 Msa1401270:CDS 50.0%
!! CCAGAAAATGAGAGTGCTGG+TGG - tig0022505:73209-73228 None:intergenic 50.0%
! CCACCAGCACTCTCATTTTC+TGG + tig0022505:73206-73225 Msa1401270:CDS 50.0%
!! CTTGTTGTTCTGGTCATGGG+CGG - tig0022505:73264-73283 None:intergenic 50.0%
ACTCCCTGAATCAGGATCAC+TGG - tig0022505:73759-73778 None:intergenic 50.0%
GCTGAGGAAGATGCATCTGA+TGG + tig0022505:74088-74107 Msa1401270:CDS 50.0%
GAGGAAGATGCATCTGATGG+AGG + tig0022505:74091-74110 Msa1401270:CDS 50.0%
CCGCCGCATCTATCTTCAAA+AGG - tig0022505:74150-74169 None:intergenic 50.0%
TCATCACAACCCAAGGGAAG+AGG + tig0022505:74511-74530 Msa1401270:CDS 50.0%
GGAGCCAAATGACCTCTGTA+TGG + tig0022505:74819-74838 Msa1401270:CDS 50.0%
CGCGTTGCAAAACCATACAG+AGG - tig0022505:74834-74853 None:intergenic 50.0%
TGTTGAAGCCTCAAGGACCA+TGG + tig0022505:74870-74889 Msa1401270:CDS 50.0%
!! GACTTTGCTTTTGATCGCGC+TGG - tig0022505:75001-75020 None:intergenic 50.0%
AAAAGGCGATGGAACGACAG+AGG + tig0022505:75273-75292 Msa1401270:CDS 50.0%
AGAACTGCATCTTCCGGTGT+TGG + tig0022505:75308-75327 Msa1401270:CDS 50.0%
AAGATAGATGCGGCGGAGAC+TGG + tig0022505:74154-74173 Msa1401270:CDS 55.0%
! GCACACCTGCAGTACTGGAG+AGG + tig0022505:71727-71746 Msa1401270:CDS 60.0%
GGCGGTACGTTGTAAGGCCA+TGG - tig0022505:73551-73570 None:intergenic 60.0%
! GCGGCGGAGACTGGTATTGA+TGG + tig0022505:74163-74182 Msa1401270:CDS 60.0%
AGGCACGGTTCGACCAACAC+CGG - tig0022505:75324-75343 None:intergenic 60.0%
!! GGTGTTGGTCGAACCGTGCC+TGG + tig0022505:75323-75342 Msa1401270:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0022505 gene 70962 75790 70962 ID=Msa1401270;Name=Msa1401270
tig0022505 mRNA 70962 75790 70962 ID=Msa1401270-mRNA-1;Parent=Msa1401270;Name=Msa1401270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=176|1|1|1|1|1|9|342|891
tig0022505 exon 70962 71196 70962 ID=Msa1401270-mRNA-1:exon:18224;Parent=Msa1401270-mRNA-1
tig0022505 exon 71318 71494 71318 ID=Msa1401270-mRNA-1:exon:18225;Parent=Msa1401270-mRNA-1
tig0022505 exon 71710 71837 71710 ID=Msa1401270-mRNA-1:exon:18226;Parent=Msa1401270-mRNA-1
tig0022505 exon 72062 72114 72062 ID=Msa1401270-mRNA-1:exon:18227;Parent=Msa1401270-mRNA-1
tig0022505 exon 72200 72249 72200 ID=Msa1401270-mRNA-1:exon:18228;Parent=Msa1401270-mRNA-1
tig0022505 exon 72359 72511 72359 ID=Msa1401270-mRNA-1:exon:18229;Parent=Msa1401270-mRNA-1
tig0022505 exon 73115 73350 73115 ID=Msa1401270-mRNA-1:exon:18230;Parent=Msa1401270-mRNA-1
tig0022505 exon 73501 75116 73501 ID=Msa1401270-mRNA-1:exon:18231;Parent=Msa1401270-mRNA-1
tig0022505 exon 75245 75790 75245 ID=Msa1401270-mRNA-1:exon:18232;Parent=Msa1401270-mRNA-1
tig0022505 five_prime_UTR 70962 71137 70962 ID=Msa1401270-mRNA-1:five_prime_utr;Parent=Msa1401270-mRNA-1
tig0022505 CDS 71138 71196 71138 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 71318 71494 71318 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 71710 71837 71710 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 72062 72114 72062 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 72200 72249 72200 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 72359 72511 72359 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 73115 73350 73115 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 73501 75116 73501 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 CDS 75245 75448 75245 ID=Msa1401270-mRNA-1:cds;Parent=Msa1401270-mRNA-1
tig0022505 three_prime_UTR 75449 75790 75449 ID=Msa1401270-mRNA-1:three_prime_utr;Parent=Msa1401270-mRNA-1
Gene Sequence

>Msa1401270

ATGGATTCCAAGACCATTCTTGATTATGCTCTGTTTCAACTCACACCAACTAGAACAAGATTTGAGCTTTTGGTGTTTAATGGAGCTGTTCGTGAGAAAATAGCTTCTGGGTTATTTGAACCTTTCATTTCTCATCTCAAATTTGTTAAAGATGAGATCTCTAAAGGTGGATACTCTATTAGGCTATTGCCTCCATCCAACACTGCTTTCTGGTTCTCCAAATCCACCTTTGAGAGATTTGTGCGGTTTGTTAGCACACCTGCAGTACTGGAGAGGTTTGTTAGCCTTGAAAAAGAAATCCAGCAGATTGAAAGTCAATTTGAAGCGAATGCGTTGTCGATGTCAGTTGCAATCCCGGATGAAGGAAACTTGCCGCACACAAATGGAAACGCAAGGAGGTTAAGTGATTCTGCAAAGTTAAATGATGCACTTGAAGGAGTTGACACTAAAGAAGAGGAAAACTCAAAGATTTCGCTGCAACGCCTTTTGGAGTCTCGAATAGCACTACTTCGAAAAGAGCAGGCAATGGCATATACACGTAGTCTTGTTGCTGGATTTGATATTGACAACATTGATGATCTTGTATATTTTGCAAATGCATTTGGAGCATCGCGTTTAAGGGAAGCTTGCATTAATTTCAAGGATTTATGGAAGAAAAAGCATGCAGATGATCTTTGGGTTCAAGAAGTAGCTGCAATGCAATCAAACTTACCACCAGCACTCTCATTTTCTGGATCATCAGGAATTATACTGGCGAATGACATAGCCGCCCATGACCAGAACAACAAGAATAATAGCTCTACAGACAGTATTCCTTCTGGCGACGAAAATGCATTTGTAGAAAACAAAAAAGACGATGTGAACTTATCGCACATGGCGAATGTTCATATGCCAATGCATATGCCATGGCCTTACAACGTACCGCCATATATGTATAATCTTCAAAATCCTAGTCAGCAAATGCCTTCATACCAAGGATATCCTCCTTACCTTCAAAATAATATGCATTGGTCTTCTAACATGGGAGTGAATCAAAAACCACGAGCAACTAAAAAAGAGAAATCTCATCATAGGAAAGGATCAGAAGAATATGAAGAGCAGCAAACAGATTCCAGTGATCCTGATTCAGGGAGTGAATCTGATTCAGATAAACAGAAAGACTCAAACAATTCTTTGAAGGATGATAAGAGGAAAAAAAACAGAAGGAAATCATCTGGAACAGTTGTGATACGTAATATCAACTACATCACTCCAAAAAGGAGAAATGGAAATGAGAGTGGAGTATCTGATGAATCTTCTTTAGAAGACGATGCTATCTTCGATGAAGAAACCATCAAACAGAAGGTTGGTGATGCACTTGAATCATTGCAGAAGGTCCATAAAGGTGAAAAACGTGGCAATCGAAAAAAGTCAGTGACCAAACACAATAAATCAAATGATGCTGCTGAGGAAGATGCATCTGATGGAGGGAACAAAAATGAGAACTGGAATGCATTCCAGAGCCTTTTGAAGATAGATGCGGCGGAGACTGGTATTGATGGATCAGAACAGATGCAATCGATTGATGTTCAGGATGAACATTTTGTGTTGAGAAACTCTGAAGGAACAATGTCATACGCTGCTAGTTCTGCTCCAAACATGGATTTCAATGAAGTTCCAAAGAATCGTGAAATTGCGGATGACTCATTTATTGTGACTCAAAGAGATGAAGGAAATGAAAGAGGATCGAAGCTGGATGAATATGTAGACAACTGTGTCCCAGTTACAAAGATCAGGGAAAGTATTGGTGAAGATATGATGTTAGCAAACACATCAAGAGAACCAAAAATTGAACTTGATGATCCGTTAAATACTTATGCTGCTGATTCATCACAACCCAAGGGAAGAGGATCAGAAGATTGGTTTATTGTTGATAACAATTTGGAAAGTATGAGAAGCCATGATTCCCCAAATGTGCCTATAGTATTTGATGGTGATAGAACTTTATCATCAGTGAGTGAAAAAAGAAGTGATAGACCTATCATTGATGATTCCTTCATGATTCAAGGTCAGTTTGTAGACAATAATCTTTCTGATTCCCAATGGAAGACAGATATAAGTATGGTTGAAGATCTAACATCTTCCAACAAGGTAGAAACCGACACAAAAGAAAAGAATGCATTATCAAAGATAGAGGAGCCAAATGACCTCTGTATGGTTTTGCAACGCGATTCAGGATTGGATTCTGTTGAAGCCTCAAGGACCATGGACTATGAAATTGACTTTTCTTACACAGAACCTGATAGAAGAGCTTCTATTGATGATTCACATGTTAATGTCAATAACAACAATCTTTCTGATAGTCCAAAGAAAACCAGCGCGATCAAAAGCAAAGTCTCACGTTTGTCAAAGAGCACGCCTGAACCAATTTCTAGAAACAGAAAGCCATCTCTCCCAAGAAAGCCTATGGTTCAAAAGAGCCAAAGGGAAAAGGAAGATGAAATTAGGAAGCAATTGGAAGAAAAGGCGATGGAACGACAGAGGAGAATCGCTGAAAGAACTGCATCTTCCGGTGTTGGTCGAACCGTGCCTGGTAAAGATCAAATAGCAAAGATTTCTTCAAAAACTGACAAGAATAAGACTCAAACTATTAAAGAGACAAACAGAAACAGTTCTGTTAAGGTCAGAGGAATTTAG

Protein sequence

>Msa1401270

MDSKTILDYALFQLTPTRTRFELLVFNGAVREKIASGLFEPFISHLKFVKDEISKGGYSIRLLPPSNTAFWFSKSTFERFVRFVSTPAVLERFVSLEKEIQQIESQFEANALSMSVAIPDEGNLPHTNGNARRLSDSAKLNDALEGVDTKEEENSKISLQRLLESRIALLRKEQAMAYTRSLVAGFDIDNIDDLVYFANAFGASRLREACINFKDLWKKKHADDLWVQEVAAMQSNLPPALSFSGSSGIILANDIAAHDQNNKNNSSTDSIPSGDENAFVENKKDDVNLSHMANVHMPMHMPWPYNVPPYMYNLQNPSQQMPSYQGYPPYLQNNMHWSSNMGVNQKPRATKKEKSHHRKGSEEYEEQQTDSSDPDSGSESDSDKQKDSNNSLKDDKRKKNRRKSSGTVVIRNINYITPKRRNGNESGVSDESSLEDDAIFDEETIKQKVGDALESLQKVHKGEKRGNRKKSVTKHNKSNDAAEEDASDGGNKNENWNAFQSLLKIDAAETGIDGSEQMQSIDVQDEHFVLRNSEGTMSYAASSAPNMDFNEVPKNREIADDSFIVTQRDEGNERGSKLDEYVDNCVPVTKIRESIGEDMMLANTSREPKIELDDPLNTYAADSSQPKGRGSEDWFIVDNNLESMRSHDSPNVPIVFDGDRTLSSVSEKRSDRPIIDDSFMIQGQFVDNNLSDSQWKTDISMVEDLTSSNKVETDTKEKNALSKIEEPNDLCMVLQRDSGLDSVEASRTMDYEIDFSYTEPDRRASIDDSHVNVNNNNLSDSPKKTSAIKSKVSRLSKSTPEPISRNRKPSLPRKPMVQKSQREKEDEIRKQLEEKAMERQRRIAERTASSGVGRTVPGKDQIAKISSKTDKNKTQTIKETNRNSSVKVRGI*