AlfalfaGEDB | Msa0061390

M. sativa cultivar zhongmu-4 / Msa0061390

KEGG: K11975
GO: GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031090 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0031966 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0060548 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060
PFAM: PF01485.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0061390	KEH43917.1	84.242	330	29	1	1	330	1	307	0.0	565

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0061390	sp\|F4ITM1\|RGSL1_ARATH	28.986	207	143	4	126	330	159	363	3.40e-26	110

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0061390	A0A072VQ64	84.242	330	29	1	1	330	1	307	0.0	565

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0012560	Msa0061390	0.840151	1.033432e-57	-8.615850e-47
Msa0061390	Msa0114990	0.817437	3.298651e-52	-8.615850e-47
Msa0061390	Msa0152530	0.882808	7.632497e-71	-8.615850e-47
Msa0061390	Msa1428610	0.847682	9.910010e-60	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0061390	MtrunA17_Chr1g0206011	85.876	177	25	0	131	307	15	191	1.99e-112	324
Msa0061390	MtrunA17_Chr1g0206001	79.577	142	29	0	187	328	3	144	1.27e-86	257
Msa0061390	MtrunA17_Chr1g0206031	75.497	151	28	1	95	236	15	165	1.03e-76	232
Msa0061390	MtrunA17_Chr2g0301841	53.333	195	89	1	124	318	94	286	1.23e-75	234
Msa0061390	MtrunA17_Chr4g0031441	45.296	287	125	5	14	300	9	263	2.46e-75	234
Msa0061390	MtrunA17_Chr4g0031451	55.051	198	86	2	131	327	2	197	9.60e-75	228
Msa0061390	MtrunA17_Chr2g0301761	45.960	198	103	2	115	310	67	262	7.33e-64	203
Msa0061390	MtrunA17_Chr2g0301821	46.524	187	98	1	124	310	85	269	9.31e-62	198
Msa0061390	MtrunA17_Chr2g0301741	45.178	197	106	1	116	312	59	253	2.46e-60	195
Msa0061390	MtrunA17_Chr8g0344981	47.739	199	100	3	115	312	52	247	1.73e-59	192
Msa0061390	MtrunA17_Chr3g0103941	38.247	251	145	4	75	324	3	244	5.73e-56	182
Msa0061390	MtrunA17_Chr2g0301751	40.758	211	110	3	115	312	68	276	1.44e-53	177
Msa0061390	MtrunA17_Chr3g0103851	42.786	201	112	2	126	324	247	446	2.75e-53	181
Msa0061390	MtrunA17_Chr3g0103961	39.423	208	121	3	119	324	48	252	1.59e-50	168
Msa0061390	MtrunA17_Chr3g0103931	39.713	209	120	3	117	324	44	247	7.22e-50	167
Msa0061390	MtrunA17_Chr3g0103871	39.091	220	128	2	94	307	25	244	1.01e-49	166
Msa0061390	MtrunA17_Chr2g0301731	38.144	194	115	2	122	314	64	253	7.79e-48	162
Msa0061390	MtrunA17_Chr3g0103911	36.596	235	139	4	77	310	5	230	1.02e-47	160
Msa0061390	MtrunA17_Chr3g0103891	36.287	237	141	4	75	310	3	230	1.25e-47	160
Msa0061390	MtrunA17_Chr4g0031461	57.600	125	50	2	204	327	1	123	1.77e-46	153
Msa0061390	MtrunA17_Chr3g0104451	39.713	209	116	3	126	324	26	234	1.89e-45	154
Msa0061390	MtrunA17_Chr3g0104441	39.901	203	113	2	126	319	30	232	2.11e-43	150
Msa0061390	MtrunA17_Chr2g0291681	37.915	211	122	2	126	328	213	422	1.62e-42	154
Msa0061390	MtrunA17_Chr5g0425671	35.586	222	125	4	92	307	78	287	4.39e-41	145
Msa0061390	MtrunA17_Chr4g0029991	34.762	210	127	4	126	327	307	514	1.83e-36	137
Msa0061390	MtrunA17_Chr5g0434721	25.220	341	185	7	3	324	29	318	4.34e-34	127
Msa0061390	MtrunA17_Chr3g0103861	32.227	211	105	4	111	317	44	220	4.68e-30	115
Msa0061390	MtrunA17_Chr3g0103951	42.276	123	68	2	186	307	20	140	6.29e-26	101
Msa0061390	MtrunA17_Chr1g0206041	92.857	42	3	0	264	305	1	42	6.16e-23	90.9
Msa0061390	MtrunA17_Chr3g0100351	28.780	205	93	4	126	327	46	200	9.67e-22	91.3
Msa0061390	MtrunA17_Chr3g0100371	28.947	228	104	6	103	329	47	217	3.79e-19	85.1
Msa0061390	MtrunA17_Chr1g0164621	28.685	251	149	8	77	323	1215	1439	4.57e-18	85.5
Msa0061390	MtrunA17_Chr3g0082091	28.458	253	147	9	77	323	1213	1437	1.14e-17	84.3
Msa0061390	MtrunA17_Chr3g0123681	29.048	210	129	7	120	323	1522	1717	2.06e-15	77.4
Msa0061390	MtrunA17_Chr3g0110331	27.523	218	146	8	117	329	126	336	3.01e-15	76.6
Msa0061390	MtrunA17_Chr3g0103841	45.714	70	37	1	256	324	1	70	1.61e-14	67.8
Msa0061390	MtrunA17_Chr2g0329221	29.952	207	132	9	124	325	145	343	9.09e-14	72.0
Msa0061390	MtrunA17_Chr5g0394311	37.963	108	58	4	212	316	169	270	1.15e-13	70.9
Msa0061390	MtrunA17_Chr4g0038181	25.778	225	147	8	103	316	67	282	1.34e-12	68.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0061390	AT3G14250.1	36.364	319	157	7	15	325	18	298	1.63e-72	227
Msa0061390	AT3G53690.1	50.259	193	95	1	126	318	115	306	8.32e-71	223
Msa0061390	AT4G19670.2	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.3	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.5	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.7	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.4	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.1	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT4G19670.6	37.917	240	130	5	102	327	183	417	7.18e-42	152
Msa0061390	AT5G37560.1	34.818	247	151	6	84	324	137	379	1.07e-41	150
Msa0061390	AT3G45470.1	33.005	203	133	3	126	327	6	206	1.71e-35	129
Msa0061390	AT2G21420.1	37.000	200	117	4	126	321	187	381	3.25e-35	133
Msa0061390	AT5G60250.1	33.962	212	127	4	126	327	301	509	3.13e-33	130
Msa0061390	AT3G45580.1	32.524	206	133	4	126	327	173	376	1.14e-32	125
Msa0061390	AT2G25370.2	36.364	198	120	4	126	320	247	441	2.37e-31	124
Msa0061390	AT2G25370.1	36.364	198	120	4	126	320	304	498	4.24e-31	123
Msa0061390	AT3G45540.1	31.731	208	130	6	126	328	100	300	6.91e-31	119
Msa0061390	AT3G45540.2	31.731	208	130	6	126	328	71	271	7.06e-31	119
Msa0061390	AT2G25360.1	36.232	207	125	6	125	327	89	292	1.45e-30	119
Msa0061390	AT2G26135.1	32.035	231	137	8	102	325	135	352	1.29e-29	117
Msa0061390	AT2G26130.1	28.986	207	143	4	126	330	159	363	3.46e-27	110
Msa0061390	AT3G45555.1	26.961	204	139	5	106	306	2	198	2.53e-24	99.0
Msa0061390	AT3G45460.1	28.934	197	122	5	136	330	181	361	1.26e-22	97.8
Msa0061390	AT3G43750.1	30.481	187	123	5	126	307	155	339	7.77e-22	94.7
Msa0061390	AT3G45480.1	30.303	198	118	6	134	327	165	346	9.93e-22	95.1
Msa0061390	AT2G19610.2	30.846	201	130	4	126	318	203	402	6.26e-20	90.1
Msa0061390	AT5G10370.1	28.977	176	117	5	144	316	1580	1750	1.01e-16	82.0
Msa0061390	AT4G01020.1	26.512	215	136	7	126	326	1561	1767	5.16e-16	79.7
Msa0061390	AT2G19610.1	28.042	189	128	3	126	307	203	390	1.95e-14	73.9
Msa0061390	AT3G45510.1	29.286	140	95	3	126	262	66	204	6.86e-14	70.9
Msa0061390	AT3G27710.1	27.053	207	145	4	120	324	115	317	9.52e-14	72.4
Msa0061390	AT2G31770.1	28.037	214	137	8	124	329	126	330	1.15e-12	68.9
Msa0061390	AT3G45570.1	28.472	144	98	3	126	265	163	305	2.90e-12	67.0
Msa0061390	AT2G31510.3	27.751	209	134	10	124	325	63	261	3.64e-11	64.3
Msa0061390	AT2G31510.2	27.751	209	134	10	124	325	135	333	6.01e-11	63.5
Msa0061390	AT2G31510.1	27.751	209	134	10	124	325	135	333	6.08e-11	63.9

Find 124 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGACATTGACGCAATATTT+AGG	0.159956	1_2:-19466280	Msa0061390:five_prime_UTR
CACTCCATTGTTCTTGTCTT+GGG	0.163560	1_2:+19465908	None:intergenic
TAAGTTCTATTGCCCGTTTA+AGG	0.213987	1_2:-19465229	Msa0061390:CDS
ACAATTCACTTGAAATAGTT+TGG	0.233189	1_2:-19466328	Msa0061390:five_prime_UTR
ACAGTTTCAAGAAACCTTAT+TGG	0.239473	1_2:-19465727	Msa0061390:CDS
TTGTTCTTGTCTTGGGGAAA+TGG	0.251419	1_2:+19465915	None:intergenic
CACCTATCAATCAACTCTTT+TGG	0.279931	1_2:+19465291	None:intergenic
ATTATTTATTGTATTGGAAT+TGG	0.281076	1_2:-19466367	Msa0061390:five_prime_UTR
TCACTCCATTGTTCTTGTCT+TGG	0.284809	1_2:+19465907	None:intergenic
TGTTCTTGTCTTGGGGAAAT+GGG	0.303834	1_2:+19465916	None:intergenic
AAAAGGTTCATATATATAAA+TGG	0.306288	1_2:+19466164	None:intergenic
GCTATGCTTGCGGTGCAAAA+TGG	0.311093	1_2:-19464488	Msa0061390:CDS
TGTCATGTCACTTGGCATCC+TGG	0.318346	1_2:-19465114	Msa0061390:CDS
CAATTCACTTGAAATAGTTT+GGG	0.318375	1_2:-19466327	Msa0061390:five_prime_UTR
ATGAAGGAAGAGAAGATGTT+AGG	0.319698	1_2:-19465179	Msa0061390:CDS
TGACATTGACGCAATATTTA+GGG	0.320741	1_2:-19466279	Msa0061390:five_prime_UTR
TTAGTCATTATTTATTGTAT+TGG	0.328264	1_2:-19466373	Msa0061390:five_prime_UTR
GGTGGAGGCTATATCTTTAC+AGG	0.331943	1_2:+19464150	None:intergenic
GTCATGTCACTTGGCATCCT+GGG	0.343483	1_2:-19465113	Msa0061390:CDS
TGTTAGAGCTTGAATCTTGC+AGG	0.348834	1_2:-19465323	Msa0061390:CDS
CTTGAAATAGTTTGGGGAAG+TGG	0.350279	1_2:-19466320	Msa0061390:five_prime_UTR
TGAAGGAAGAGAAGATGTTA+GGG	0.359913	1_2:-19465178	Msa0061390:CDS
ATTTCAGAACAATCCTTAAA+CGG	0.364133	1_2:+19465216	None:intergenic
AGGAAAAGGATGAAGGGTTT+TGG	0.374297	1_2:+19465685	None:intergenic
CACCCTTTCTTAGAGACTCT+TGG	0.377414	1_2:-19464131	Msa0061390:three_prime_UTR
AGATTTGTGCGGAAACAAAA+AGG	0.391913	1_2:-19465476	Msa0061390:CDS
AAAGGACTGAGGAGATGTTC+AGG	0.404278	1_2:-19465458	Msa0061390:CDS
AGTGATGACAGAGGCCAATA+AGG	0.404886	1_2:+19465713	None:intergenic
TCATCGGAGACAGGGACGTT+AGG	0.409844	1_2:+19465768	None:intergenic
ACACATTTGTTATGCTGTCT+TGG	0.424605	1_2:+19465373	None:intergenic
TTTCAGAACAATCCTTAAAC+GGG	0.442510	1_2:+19465217	None:intergenic
TTGTGGCTGGTATGTCTCTC+AGG	0.444742	1_2:+19464079	None:intergenic
GAAGCATAGCATACATGAAA+AGG	0.456187	1_2:+19466147	None:intergenic
CTAATAAGAAAAGGTGGAAA+AGG	0.462208	1_2:-19465017	Msa0061390:CDS
GCAATGGTGGTGACTGCATA+AGG	0.463424	1_2:+19465583	None:intergenic
TTCCAAAAGAGTTGATTGAT+AGG	0.467343	1_2:-19465293	Msa0061390:CDS
TCAACATAGAACCTGCATCT+TGG	0.469195	1_2:+19464991	None:intergenic
ACTCCATTGTTCTTGTCTTG+GGG	0.474591	1_2:+19465909	None:intergenic
GTCACTTGGCATCCTGGGGT+TGG	0.476032	1_2:-19465108	Msa0061390:CDS
GAGGATGGTTGTTGCGCCAT+TGG	0.477772	1_2:+19465858	None:intergenic
AACGAACGAGTTTATTAAAG+TGG	0.477849	1_2:+19465944	None:intergenic
ATCAAGACGTGCATGATTCA+CGG	0.481390	1_2:+19464234	None:intergenic
GTTCTTGTCTTGGGGAAATG+GGG	0.489553	1_2:+19465917	None:intergenic
GTTAGGGTCAATTTCATTGT+CGG	0.489721	1_2:+19465785	None:intergenic
GGGTGAGTGTGAAAGGTTAG+TGG	0.489847	1_2:+19465966	None:intergenic
AAACCAAGAGTCTCTAAGAA+AGG	0.490014	1_2:+19464128	None:intergenic
CATCGGAGACAGGGACGTTA+GGG	0.494082	1_2:+19465769	None:intergenic
TAAAGTGGGGTGAGTGTGAA+AGG	0.494266	1_2:+19465959	None:intergenic
TTGTCCTGGTTTGAACTGCA+AGG	0.494597	1_2:-19465349	Msa0061390:CDS
ATAACAAATGTGTCTTGTCC+TGG	0.494685	1_2:-19465363	Msa0061390:CDS
GCGTACTTGTCATCGGAGAC+AGG	0.495039	1_2:+19465759	None:intergenic
TTCTTGTCTTGGGGAAATGG+GGG	0.496946	1_2:+19465918	None:intergenic
GGAAAAGGTGTCCAAGATGC+AGG	0.500394	1_2:-19465002	Msa0061390:CDS
GCATCCTGGGGTTGGTTGTG+AGG	0.501263	1_2:-19465100	Msa0061390:CDS
ATGTGTCTCTTTAAACAGTA+AGG	0.501676	1_2:+19464362	None:intergenic
GATGAAATATATATTTATTG+TGG	0.502745	1_2:-19464417	Msa0061390:three_prime_UTR
TCTTCTTCCTCAAAATCTCT+CGG	0.506168	1_2:-19466233	Msa0061390:five_prime_UTR
GGAAGAAGAAAGTGAAAGAG+AGG	0.506844	1_2:+19466247	None:intergenic
TCATCGAAGGCTATTGATGT+TGG	0.512485	1_2:-19465546	Msa0061390:CDS
AAATTAGATAGATGCAAGAA+GGG	0.513950	1_2:-19464439	Msa0061390:exon
ATAGCAAGTACACTTTCAAA+AGG	0.515766	1_2:+19464270	None:intergenic
TGAATGTGGATGAAAGAGGA+AGG	0.518591	1_2:-19465065	Msa0061390:CDS
GTGCAAGCTGTCATGTCACT+TGG	0.521854	1_2:-19465122	Msa0061390:CDS
GAAATTAGATAGATGCAAGA+AGG	0.523692	1_2:-19464440	Msa0061390:exon
GCCAAGAAGGAAAAGGATGA+AGG	0.524777	1_2:+19465678	None:intergenic
CACATTCAGAACAAAATGAA+TGG	0.525752	1_2:+19465421	None:intergenic
CATCATTTGCGAGATTTGTG+CGG	0.525830	1_2:-19465487	Msa0061390:CDS
AGATCTCCTTGTGAGGGAGC+TGG	0.527981	1_2:-19465040	Msa0061390:CDS
TTAAACGGGCAATAGAACTT+AGG	0.535232	1_2:+19465231	None:intergenic
AACCAAGAGTCTCTAAGAAA+GGG	0.546527	1_2:+19464129	None:intergenic
GATGTTTGCATATTACGTGC+AGG	0.550867	1_2:-19464957	Msa0061390:intron
GGTGACTGCATAAGGGTTTG+AGG	0.562459	1_2:+19465591	None:intergenic
ACGAACGAGTTTATTAAAGT+GGG	0.563896	1_2:+19465945	None:intergenic
CGTCTACGGTGTCAAGGACA+AGG	0.566082	1_2:+19465829	None:intergenic
TTCTGAAATGTTGCTTGATG+AGG	0.567131	1_2:-19465202	Msa0061390:CDS
TGCTTCAGCGTACTTGTCAT+CGG	0.567735	1_2:+19465752	None:intergenic
TATTAGCCAGCTCCCTCACA+AGG	0.570249	1_2:+19465034	None:intergenic
TAAGGAACTTCCCCTATCCA+TGG	0.571888	1_2:+19464380	None:intergenic
ATCGTCATCACTATCATCAT+CGG	0.573649	1_2:-19466208	Msa0061390:five_prime_UTR
TGTCCTGGTTTGAACTGCAA+GGG	0.576754	1_2:-19465348	Msa0061390:CDS
GGGAGCTGGCTAATAAGAAA+AGG	0.577777	1_2:-19465026	Msa0061390:CDS
GGTGTCAAGGACAAGGAATG+AGG	0.580931	1_2:+19465836	None:intergenic
AATTTCATTGTCGGAGACAA+CGG	0.581243	1_2:+19465794	None:intergenic
CAAAAGAGTTGATTGATAGG+TGG	0.583180	1_2:-19465290	Msa0061390:CDS
TCATGTCACTTGGCATCCTG+GGG	0.587704	1_2:-19465112	Msa0061390:CDS
AAAAGTCGTCTACGGTGTCA+AGG	0.592520	1_2:+19465823	None:intergenic
CAAAACAATCTATGACAAGA+AGG	0.592673	1_2:+19465144	None:intergenic
GATGCTACACACGGTAATGA+TGG	0.595205	1_2:+19465648	None:intergenic
CTGCGTAGCATCTTCATCGA+AGG	0.598053	1_2:-19465559	Msa0061390:CDS
ACACCCTTGCAGTTCAAACC+AGG	0.598898	1_2:+19465345	None:intergenic
GCAAAATGGACATCTTCTCA+TGG	0.606786	1_2:-19464474	Msa0061390:CDS
CAAATCTCGCAAATGATGAT+CGG	0.607678	1_2:+19465492	None:intergenic
CAAGAGTCTCTAAGAAAGGG+TGG	0.613022	1_2:+19464132	None:intergenic
TGATGGTGGTGGTGCCAAGA+AGG	0.616247	1_2:+19465665	None:intergenic
GGAGTTTCAAACAATGAATG+TGG	0.616690	1_2:-19465079	Msa0061390:CDS
ACAATGAATGTGGATGAAAG+AGG	0.616843	1_2:-19465069	Msa0061390:CDS
CCAAGAAGGAAAAGGATGAA+GGG	0.617075	1_2:+19465679	None:intergenic
CAATGGTGGTGACTGCATAA+GGG	0.617916	1_2:+19465584	None:intergenic
GAATGTGGATGAAAGAGGAA+GGG	0.623790	1_2:-19465064	Msa0061390:CDS
GAAGGGAAGATCTCCTTGTG+AGG	0.624223	1_2:-19465047	Msa0061390:CDS
TTTGATATATCCATGGATAG+GGG	0.625407	1_2:-19464390	Msa0061390:three_prime_UTR
TGGTGGTGCCAAGAAGGAAA+AGG	0.625615	1_2:+19465671	None:intergenic
AAGGGAAGATCTCCTTGTGA+GGG	0.626069	1_2:-19465046	Msa0061390:CDS
AACTCCTCACAACCAACCCC+AGG	0.626419	1_2:+19465096	None:intergenic
AGCTGGCTAATAAGAAAAGG+TGG	0.627214	1_2:-19465023	Msa0061390:CDS
GGAGAAGTAAAAGTCGTCTA+CGG	0.631739	1_2:+19465815	None:intergenic
AGGACAAGGAATGAGGAGGA+TGG	0.637593	1_2:+19465843	None:intergenic
CGTACTTGTCATCGGAGACA+GGG	0.638650	1_2:+19465760	None:intergenic
AATTCACTTGAAATAGTTTG+GGG	0.644524	1_2:-19466326	Msa0061390:five_prime_UTR
GAGTCTCTAAGAAAGGGTGG+AGG	0.645832	1_2:+19464135	None:intergenic
TGAATGTGTTGTCAAACAAG+TGG	0.654131	1_2:-19465406	Msa0061390:CDS
GATGCTACGCAGTGCAATGG+TGG	0.655147	1_2:+19465570	None:intergenic
TTTCCCCAAGACAAGAACAA+TGG	0.656550	1_2:-19465912	Msa0061390:five_prime_UTR
CGAACGAGTTTATTAAAGTG+GGG	0.657987	1_2:+19465946	None:intergenic
GTCAAGGACAAGGAATGAGG+AGG	0.658566	1_2:+19465839	None:intergenic
GAAGATGCTACGCAGTGCAA+TGG	0.668125	1_2:+19465567	None:intergenic
ATGTTGCTTGATGAGGATGA+AGG	0.680073	1_2:-19465195	Msa0061390:CDS
TTTGATGAAGATGCTACACA+CGG	0.680690	1_2:+19465639	None:intergenic
ACACACGGTAATGATGGTGG+TGG	0.696914	1_2:+19465654	None:intergenic
AATGACTAAAATCATAAACA+CGG	0.712254	1_2:+19466387	None:intergenic
GTGGAATGATGCATTGTGTG+AGG	0.727329	1_2:-19465271	Msa0061390:CDS
GCTACACACGGTAATGATGG+TGG	0.734605	1_2:+19465651	None:intergenic
TTGGTGAGAAGTGATGACAG+AGG	0.745687	1_2:+19465704	None:intergenic
AAATGGACATCTTCTCATGG+TGG	0.767144	1_2:-19464471	Msa0061390:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAGTCATTATTTATTGTAT+TGG	-	chr1_2:19464107-19464126	Msa0061390:three_prime_UTR	15.0%
!!	ATTATTTATTGTATTGGAAT+TGG	-	chr1_2:19464113-19464132	Msa0061390:three_prime_UTR	15.0%
!!	AAAAGGTTCATATATATAAA+TGG	+	chr1_2:19464319-19464338	None:intergenic	15.0%
!!	TGAAAATATATAAAAAGTGA+AGG	+	chr1_2:19464430-19464449	None:intergenic	15.0%
!!!	ATTTTTAAATTGTGTGTTTT+TGG	-	chr1_2:19465636-19465655	Msa0061390:CDS	15.0%
!!	AATTAACAAAGTAAAACTAA+AGG	+	chr1_2:19465692-19465711	None:intergenic	15.0%
!!	TACAACAATTTCTTAATTAA+GGG	+	chr1_2:19465908-19465927	None:intergenic	15.0%
!!	TTACAACAATTTCTTAATTA+AGG	+	chr1_2:19465909-19465928	None:intergenic	15.0%
!!	GATGAAATATATATTTATTG+TGG	-	chr1_2:19466063-19466082	Msa0061390:five_prime_UTR	15.0%
!!	TTAGTCATTATTTATTGTAT+TGG	-	chr1_2:19464107-19464126	Msa0061390:three_prime_UTR	15.0%
!!	ATTATTTATTGTATTGGAAT+TGG	-	chr1_2:19464113-19464132	Msa0061390:three_prime_UTR	15.0%
!!	AAAAGGTTCATATATATAAA+TGG	+	chr1_2:19464319-19464338	None:intergenic	15.0%
!!	TGAAAATATATAAAAAGTGA+AGG	+	chr1_2:19464430-19464449	None:intergenic	15.0%
!!!	ATTTTTAAATTGTGTGTTTT+TGG	-	chr1_2:19465636-19465655	Msa0061390:CDS	15.0%
!!	AATTAACAAAGTAAAACTAA+AGG	+	chr1_2:19465692-19465711	None:intergenic	15.0%
!!	TACAACAATTTCTTAATTAA+GGG	+	chr1_2:19465908-19465927	None:intergenic	15.0%
!!	TTACAACAATTTCTTAATTA+AGG	+	chr1_2:19465909-19465928	None:intergenic	15.0%
!!	GATGAAATATATATTTATTG+TGG	-	chr1_2:19466063-19466082	Msa0061390:five_prime_UTR	15.0%
!!	AATGACTAAAATCATAAACA+CGG	+	chr1_2:19464096-19464115	None:intergenic	20.0%
!!!	TGTTTAACGTTTTGATTAAA+AGG	-	chr1_2:19465834-19465853	Msa0061390:CDS	20.0%
!!	AATGACTAAAATCATAAACA+CGG	+	chr1_2:19464096-19464115	None:intergenic	20.0%
!!!	TGTTTAACGTTTTGATTAAA+AGG	-	chr1_2:19465834-19465853	Msa0061390:CDS	20.0%
!	ACAATTCACTTGAAATAGTT+TGG	-	chr1_2:19464152-19464171	Msa0061390:three_prime_UTR	25.0%
!	CAATTCACTTGAAATAGTTT+GGG	-	chr1_2:19464153-19464172	Msa0061390:three_prime_UTR	25.0%
!	AATTCACTTGAAATAGTTTG+GGG	-	chr1_2:19464154-19464173	Msa0061390:three_prime_UTR	25.0%
!!	TAAGTTTTTGTGTGTTTATG+TGG	+	chr1_2:19464600-19464619	None:intergenic	25.0%
!	ATTTCAGAACAATCCTTAAA+CGG	+	chr1_2:19465267-19465286	None:intergenic	25.0%
!!	ATTCAACTCTTCTCTATTTT+CGG	-	chr1_2:19465566-19465585	Msa0061390:CDS	25.0%
!!!	TATCATTTTTTGTGTCACTT+TGG	-	chr1_2:19465665-19465684	Msa0061390:CDS	25.0%
!	AAATGAACGATATTGATCTT+TGG	+	chr1_2:19465800-19465819	None:intergenic	25.0%
!!!	TAACGTTTTGATTAAAAGGA+AGG	-	chr1_2:19465838-19465857	Msa0061390:CDS	25.0%
!	AAATTAGATAGATGCAAGAA+GGG	-	chr1_2:19466041-19466060	Msa0061390:five_prime_UTR	25.0%
!!	TTTTGATATATCCATGGATA+GGG	-	chr1_2:19466089-19466108	Msa0061390:five_prime_UTR	25.0%
!	ACAATTCACTTGAAATAGTT+TGG	-	chr1_2:19464152-19464171	Msa0061390:three_prime_UTR	25.0%
!	CAATTCACTTGAAATAGTTT+GGG	-	chr1_2:19464153-19464172	Msa0061390:three_prime_UTR	25.0%
!	AATTCACTTGAAATAGTTTG+GGG	-	chr1_2:19464154-19464173	Msa0061390:three_prime_UTR	25.0%
!!	TAAGTTTTTGTGTGTTTATG+TGG	+	chr1_2:19464600-19464619	None:intergenic	25.0%
!	ATTTCAGAACAATCCTTAAA+CGG	+	chr1_2:19465267-19465286	None:intergenic	25.0%
!!	ATTCAACTCTTCTCTATTTT+CGG	-	chr1_2:19465566-19465585	Msa0061390:CDS	25.0%
!!!	TATCATTTTTTGTGTCACTT+TGG	-	chr1_2:19465665-19465684	Msa0061390:CDS	25.0%
!	AAATGAACGATATTGATCTT+TGG	+	chr1_2:19465800-19465819	None:intergenic	25.0%
!!!	TAACGTTTTGATTAAAAGGA+AGG	-	chr1_2:19465838-19465857	Msa0061390:CDS	25.0%
!	AAATTAGATAGATGCAAGAA+GGG	-	chr1_2:19466041-19466060	Msa0061390:five_prime_UTR	25.0%
!!	TTTTGATATATCCATGGATA+GGG	-	chr1_2:19466089-19466108	Msa0061390:five_prime_UTR	25.0%
	TTGACATTGACGCAATATTT+AGG	-	chr1_2:19464200-19464219	Msa0061390:three_prime_UTR	30.0%
	TGACATTGACGCAATATTTA+GGG	-	chr1_2:19464201-19464220	Msa0061390:three_prime_UTR	30.0%
	AGACTTCAAAAAGAGTAAAG+AGG	+	chr1_2:19464477-19464496	None:intergenic	30.0%
	ACGAACGAGTTTATTAAAGT+GGG	+	chr1_2:19464538-19464557	None:intergenic	30.0%
	AACGAACGAGTTTATTAAAG+TGG	+	chr1_2:19464539-19464558	None:intergenic	30.0%
	ACAGTTTCAAGAAACCTTAT+TGG	-	chr1_2:19464753-19464772	Msa0061390:intron	30.0%
	CACATTCAGAACAAAATGAA+TGG	+	chr1_2:19465062-19465081	None:intergenic	30.0%
!	TTCCAAAAGAGTTGATTGAT+AGG	-	chr1_2:19465187-19465206	Msa0061390:CDS	30.0%
	TTTCAGAACAATCCTTAAAC+GGG	+	chr1_2:19465266-19465285	None:intergenic	30.0%
	CAAAACAATCTATGACAAGA+AGG	+	chr1_2:19465339-19465358	None:intergenic	30.0%
	CTAATAAGAAAAGGTGGAAA+AGG	-	chr1_2:19465463-19465482	Msa0061390:CDS	30.0%
	CAGGTTCTATGTTGAAAAAA+GGG	-	chr1_2:19465497-19465516	Msa0061390:CDS	30.0%
	TTCTATGTTGAAAAAAGGGA+TGG	-	chr1_2:19465501-19465520	Msa0061390:CDS	30.0%
	TAAGTATGAGATGATTGTCT+TGG	-	chr1_2:19465718-19465737	Msa0061390:CDS	30.0%
	GAGCATCATAAGTTAAATCA+TGG	-	chr1_2:19465860-19465879	Msa0061390:exon	30.0%
	TTCTTAATTAAGGGTCACTT+TGG	+	chr1_2:19465899-19465918	None:intergenic	30.0%
	AATCAGTGAACAACTGAATA+AGG	-	chr1_2:19465935-19465954	Msa0061390:five_prime_UTR	30.0%
	ATCAGTGAACAACTGAATAA+GGG	-	chr1_2:19465936-19465955	Msa0061390:five_prime_UTR	30.0%
	GAAATTAGATAGATGCAAGA+AGG	-	chr1_2:19466040-19466059	Msa0061390:five_prime_UTR	30.0%
!!!	TGGTTGTTTTGATATATCCA+TGG	-	chr1_2:19466083-19466102	Msa0061390:five_prime_UTR	30.0%
!!	GTTTTGATATATCCATGGAT+AGG	-	chr1_2:19466088-19466107	Msa0061390:five_prime_UTR	30.0%
	TTTGATATATCCATGGATAG+GGG	-	chr1_2:19466090-19466109	Msa0061390:five_prime_UTR	30.0%
	ATGTGTCTCTTTAAACAGTA+AGG	+	chr1_2:19466121-19466140	None:intergenic	30.0%
	ATAGCAAGTACACTTTCAAA+AGG	+	chr1_2:19466213-19466232	None:intergenic	30.0%
	TTGACATTGACGCAATATTT+AGG	-	chr1_2:19464200-19464219	Msa0061390:three_prime_UTR	30.0%
	TGACATTGACGCAATATTTA+GGG	-	chr1_2:19464201-19464220	Msa0061390:three_prime_UTR	30.0%
	AGACTTCAAAAAGAGTAAAG+AGG	+	chr1_2:19464477-19464496	None:intergenic	30.0%
	ACGAACGAGTTTATTAAAGT+GGG	+	chr1_2:19464538-19464557	None:intergenic	30.0%
	AACGAACGAGTTTATTAAAG+TGG	+	chr1_2:19464539-19464558	None:intergenic	30.0%
	ACAGTTTCAAGAAACCTTAT+TGG	-	chr1_2:19464753-19464772	Msa0061390:intron	30.0%
	CACATTCAGAACAAAATGAA+TGG	+	chr1_2:19465062-19465081	None:intergenic	30.0%
!	TTCCAAAAGAGTTGATTGAT+AGG	-	chr1_2:19465187-19465206	Msa0061390:CDS	30.0%
	TTTCAGAACAATCCTTAAAC+GGG	+	chr1_2:19465266-19465285	None:intergenic	30.0%
	CAAAACAATCTATGACAAGA+AGG	+	chr1_2:19465339-19465358	None:intergenic	30.0%
	CTAATAAGAAAAGGTGGAAA+AGG	-	chr1_2:19465463-19465482	Msa0061390:CDS	30.0%
	CAGGTTCTATGTTGAAAAAA+GGG	-	chr1_2:19465497-19465516	Msa0061390:CDS	30.0%
	TTCTATGTTGAAAAAAGGGA+TGG	-	chr1_2:19465501-19465520	Msa0061390:CDS	30.0%
	TAAGTATGAGATGATTGTCT+TGG	-	chr1_2:19465718-19465737	Msa0061390:CDS	30.0%
	GAGCATCATAAGTTAAATCA+TGG	-	chr1_2:19465860-19465879	Msa0061390:exon	30.0%
	TTCTTAATTAAGGGTCACTT+TGG	+	chr1_2:19465899-19465918	None:intergenic	30.0%
	AATCAGTGAACAACTGAATA+AGG	-	chr1_2:19465935-19465954	Msa0061390:five_prime_UTR	30.0%
	ATCAGTGAACAACTGAATAA+GGG	-	chr1_2:19465936-19465955	Msa0061390:five_prime_UTR	30.0%
	GAAATTAGATAGATGCAAGA+AGG	-	chr1_2:19466040-19466059	Msa0061390:five_prime_UTR	30.0%
!!!	TGGTTGTTTTGATATATCCA+TGG	-	chr1_2:19466083-19466102	Msa0061390:five_prime_UTR	30.0%
!!	GTTTTGATATATCCATGGAT+AGG	-	chr1_2:19466088-19466107	Msa0061390:five_prime_UTR	30.0%
	TTTGATATATCCATGGATAG+GGG	-	chr1_2:19466090-19466109	Msa0061390:five_prime_UTR	30.0%
	ATGTGTCTCTTTAAACAGTA+AGG	+	chr1_2:19466121-19466140	None:intergenic	30.0%
	ATAGCAAGTACACTTTCAAA+AGG	+	chr1_2:19466213-19466232	None:intergenic	30.0%
	TCTTCTTCCTCAAAATCTCT+CGG	-	chr1_2:19464247-19464266	Msa0061390:three_prime_UTR	35.0%
	ATCGTCATCACTATCATCAT+CGG	-	chr1_2:19464272-19464291	Msa0061390:three_prime_UTR	35.0%
	GAAGCATAGCATACATGAAA+AGG	+	chr1_2:19464336-19464355	None:intergenic	35.0%
	CGAACGAGTTTATTAAAGTG+GGG	+	chr1_2:19464537-19464556	None:intergenic	35.0%
	CACACAAAAACTTACACCAA+TGG	-	chr1_2:19464606-19464625	Msa0061390:intron	35.0%
	AATTTCATTGTCGGAGACAA+CGG	+	chr1_2:19464689-19464708	None:intergenic	35.0%
	GTTAGGGTCAATTTCATTGT+CGG	+	chr1_2:19464698-19464717	None:intergenic	35.0%
	TTTGATGAAGATGCTACACA+CGG	+	chr1_2:19464844-19464863	None:intergenic	35.0%
	CAAATCTCGCAAATGATGAT+CGG	+	chr1_2:19464991-19465010	None:intergenic	35.0%
	AGATTTGTGCGGAAACAAAA+AGG	-	chr1_2:19465004-19465023	Msa0061390:CDS	35.0%
	TGAATGTGTTGTCAAACAAG+TGG	-	chr1_2:19465074-19465093	Msa0061390:CDS	35.0%
!!	ACACATTTGTTATGCTGTCT+TGG	+	chr1_2:19465110-19465129	None:intergenic	35.0%
	ATAACAAATGTGTCTTGTCC+TGG	-	chr1_2:19465117-19465136	Msa0061390:CDS	35.0%
!	CACCTATCAATCAACTCTTT+TGG	+	chr1_2:19465192-19465211	None:intergenic	35.0%
!	CAAAAGAGTTGATTGATAGG+TGG	-	chr1_2:19465190-19465209	Msa0061390:CDS	35.0%
	TTAAACGGGCAATAGAACTT+AGG	+	chr1_2:19465252-19465271	None:intergenic	35.0%
	TAAGTTCTATTGCCCGTTTA+AGG	-	chr1_2:19465251-19465270	Msa0061390:CDS	35.0%
!!	TTCTGAAATGTTGCTTGATG+AGG	-	chr1_2:19465278-19465297	Msa0061390:CDS	35.0%
	ATGAAGGAAGAGAAGATGTT+AGG	-	chr1_2:19465301-19465320	Msa0061390:CDS	35.0%
	TGAAGGAAGAGAAGATGTTA+GGG	-	chr1_2:19465302-19465321	Msa0061390:CDS	35.0%
	GGAGTTTCAAACAATGAATG+TGG	-	chr1_2:19465401-19465420	Msa0061390:CDS	35.0%
	ACAATGAATGTGGATGAAAG+AGG	-	chr1_2:19465411-19465430	Msa0061390:CDS	35.0%
	GCAGGTTCTATGTTGAAAAA+AGG	-	chr1_2:19465496-19465515	Msa0061390:CDS	35.0%
	TGATTGTCTTGGCATTCATT+TGG	-	chr1_2:19465729-19465748	Msa0061390:CDS	35.0%
!!	TTTGAGTTTTGCTATGCTTG+CGG	-	chr1_2:19465982-19466001	Msa0061390:five_prime_UTR	35.0%
!	AACCAAGAGTCTCTAAGAAA+GGG	+	chr1_2:19466354-19466373	None:intergenic	35.0%
!	AAACCAAGAGTCTCTAAGAA+AGG	+	chr1_2:19466355-19466374	None:intergenic	35.0%
	TCTTCTTCCTCAAAATCTCT+CGG	-	chr1_2:19464247-19464266	Msa0061390:three_prime_UTR	35.0%
	ATCGTCATCACTATCATCAT+CGG	-	chr1_2:19464272-19464291	Msa0061390:three_prime_UTR	35.0%
	GAAGCATAGCATACATGAAA+AGG	+	chr1_2:19464336-19464355	None:intergenic	35.0%
	CGAACGAGTTTATTAAAGTG+GGG	+	chr1_2:19464537-19464556	None:intergenic	35.0%
	CACACAAAAACTTACACCAA+TGG	-	chr1_2:19464606-19464625	Msa0061390:intron	35.0%
	AATTTCATTGTCGGAGACAA+CGG	+	chr1_2:19464689-19464708	None:intergenic	35.0%
	GTTAGGGTCAATTTCATTGT+CGG	+	chr1_2:19464698-19464717	None:intergenic	35.0%
	TTTGATGAAGATGCTACACA+CGG	+	chr1_2:19464844-19464863	None:intergenic	35.0%
	CAAATCTCGCAAATGATGAT+CGG	+	chr1_2:19464991-19465010	None:intergenic	35.0%
	AGATTTGTGCGGAAACAAAA+AGG	-	chr1_2:19465004-19465023	Msa0061390:CDS	35.0%
	TGAATGTGTTGTCAAACAAG+TGG	-	chr1_2:19465074-19465093	Msa0061390:CDS	35.0%
!!	ACACATTTGTTATGCTGTCT+TGG	+	chr1_2:19465110-19465129	None:intergenic	35.0%
	ATAACAAATGTGTCTTGTCC+TGG	-	chr1_2:19465117-19465136	Msa0061390:CDS	35.0%
!	CACCTATCAATCAACTCTTT+TGG	+	chr1_2:19465192-19465211	None:intergenic	35.0%
!	CAAAAGAGTTGATTGATAGG+TGG	-	chr1_2:19465190-19465209	Msa0061390:CDS	35.0%
	TTAAACGGGCAATAGAACTT+AGG	+	chr1_2:19465252-19465271	None:intergenic	35.0%
	TAAGTTCTATTGCCCGTTTA+AGG	-	chr1_2:19465251-19465270	Msa0061390:CDS	35.0%
!!	TTCTGAAATGTTGCTTGATG+AGG	-	chr1_2:19465278-19465297	Msa0061390:CDS	35.0%
	ATGAAGGAAGAGAAGATGTT+AGG	-	chr1_2:19465301-19465320	Msa0061390:CDS	35.0%
	TGAAGGAAGAGAAGATGTTA+GGG	-	chr1_2:19465302-19465321	Msa0061390:CDS	35.0%
	GGAGTTTCAAACAATGAATG+TGG	-	chr1_2:19465401-19465420	Msa0061390:CDS	35.0%
	ACAATGAATGTGGATGAAAG+AGG	-	chr1_2:19465411-19465430	Msa0061390:CDS	35.0%
	GCAGGTTCTATGTTGAAAAA+AGG	-	chr1_2:19465496-19465515	Msa0061390:CDS	35.0%
	TGATTGTCTTGGCATTCATT+TGG	-	chr1_2:19465729-19465748	Msa0061390:CDS	35.0%
!!	TTTGAGTTTTGCTATGCTTG+CGG	-	chr1_2:19465982-19466001	Msa0061390:five_prime_UTR	35.0%
!	AACCAAGAGTCTCTAAGAAA+GGG	+	chr1_2:19466354-19466373	None:intergenic	35.0%
!	AAACCAAGAGTCTCTAAGAA+AGG	+	chr1_2:19466355-19466374	None:intergenic	35.0%
	CTTGAAATAGTTTGGGGAAG+TGG	-	chr1_2:19464160-19464179	Msa0061390:three_prime_UTR	40.0%
	GGAAGAAGAAAGTGAAAGAG+AGG	+	chr1_2:19464236-19464255	None:intergenic	40.0%
	TGTTCTTGTCTTGGGGAAAT+GGG	+	chr1_2:19464567-19464586	None:intergenic	40.0%
	TTGTTCTTGTCTTGGGGAAA+TGG	+	chr1_2:19464568-19464587	None:intergenic	40.0%
	TTTCCCCAAGACAAGAACAA+TGG	-	chr1_2:19464568-19464587	Msa0061390:intron	40.0%
	ACTCCATTGTTCTTGTCTTG+GGG	+	chr1_2:19464574-19464593	None:intergenic	40.0%
	CACTCCATTGTTCTTGTCTT+GGG	+	chr1_2:19464575-19464594	None:intergenic	40.0%
	TCACTCCATTGTTCTTGTCT+TGG	+	chr1_2:19464576-19464595	None:intergenic	40.0%
	GGAGAAGTAAAAGTCGTCTA+CGG	+	chr1_2:19464668-19464687	None:intergenic	40.0%
!	AGGAAAAGGATGAAGGGTTT+TGG	+	chr1_2:19464798-19464817	None:intergenic	40.0%
	CCAAGAAGGAAAAGGATGAA+GGG	+	chr1_2:19464804-19464823	None:intergenic	40.0%
	TCATCGAAGGCTATTGATGT+TGG	-	chr1_2:19464934-19464953	Msa0061390:intron	40.0%
	CATCATTTGCGAGATTTGTG+CGG	-	chr1_2:19464993-19465012	Msa0061390:CDS	40.0%
	TGTTAGAGCTTGAATCTTGC+AGG	-	chr1_2:19465157-19465176	Msa0061390:CDS	40.0%
!	ATGTTGCTTGATGAGGATGA+AGG	-	chr1_2:19465285-19465304	Msa0061390:CDS	40.0%
	TGAATGTGGATGAAAGAGGA+AGG	-	chr1_2:19465415-19465434	Msa0061390:CDS	40.0%
	GAATGTGGATGAAAGAGGAA+GGG	-	chr1_2:19465416-19465435	Msa0061390:CDS	40.0%
	AGCTGGCTAATAAGAAAAGG+TGG	-	chr1_2:19465457-19465476	Msa0061390:CDS	40.0%
	TCAACATAGAACCTGCATCT+TGG	+	chr1_2:19465492-19465511	None:intergenic	40.0%
	GATGTTTGCATATTACGTGC+AGG	-	chr1_2:19465523-19465542	Msa0061390:CDS	40.0%
	GAAACCAATCCAAATAGCTC+CGG	+	chr1_2:19465755-19465774	None:intergenic	40.0%
	TAAGGGTGATGTTTGTTTGC+AGG	-	chr1_2:19465953-19465972	Msa0061390:five_prime_UTR	40.0%
	GCAAAATGGACATCTTCTCA+TGG	-	chr1_2:19466006-19466025	Msa0061390:five_prime_UTR	40.0%
	AAATGGACATCTTCTCATGG+TGG	-	chr1_2:19466009-19466028	Msa0061390:five_prime_UTR	40.0%
	ATCAAGACGTGCATGATTCA+CGG	+	chr1_2:19466249-19466268	None:intergenic	40.0%
	CTTGAAATAGTTTGGGGAAG+TGG	-	chr1_2:19464160-19464179	Msa0061390:three_prime_UTR	40.0%
	GGAAGAAGAAAGTGAAAGAG+AGG	+	chr1_2:19464236-19464255	None:intergenic	40.0%
	TGTTCTTGTCTTGGGGAAAT+GGG	+	chr1_2:19464567-19464586	None:intergenic	40.0%
	TTGTTCTTGTCTTGGGGAAA+TGG	+	chr1_2:19464568-19464587	None:intergenic	40.0%
	TTTCCCCAAGACAAGAACAA+TGG	-	chr1_2:19464568-19464587	Msa0061390:intron	40.0%
	ACTCCATTGTTCTTGTCTTG+GGG	+	chr1_2:19464574-19464593	None:intergenic	40.0%
	CACTCCATTGTTCTTGTCTT+GGG	+	chr1_2:19464575-19464594	None:intergenic	40.0%
	TCACTCCATTGTTCTTGTCT+TGG	+	chr1_2:19464576-19464595	None:intergenic	40.0%
	GGAGAAGTAAAAGTCGTCTA+CGG	+	chr1_2:19464668-19464687	None:intergenic	40.0%
!	AGGAAAAGGATGAAGGGTTT+TGG	+	chr1_2:19464798-19464817	None:intergenic	40.0%
	CCAAGAAGGAAAAGGATGAA+GGG	+	chr1_2:19464804-19464823	None:intergenic	40.0%
	TCATCGAAGGCTATTGATGT+TGG	-	chr1_2:19464934-19464953	Msa0061390:intron	40.0%
	CATCATTTGCGAGATTTGTG+CGG	-	chr1_2:19464993-19465012	Msa0061390:CDS	40.0%
	TGTTAGAGCTTGAATCTTGC+AGG	-	chr1_2:19465157-19465176	Msa0061390:CDS	40.0%
!	ATGTTGCTTGATGAGGATGA+AGG	-	chr1_2:19465285-19465304	Msa0061390:CDS	40.0%
	TGAATGTGGATGAAAGAGGA+AGG	-	chr1_2:19465415-19465434	Msa0061390:CDS	40.0%
	GAATGTGGATGAAAGAGGAA+GGG	-	chr1_2:19465416-19465435	Msa0061390:CDS	40.0%
	AGCTGGCTAATAAGAAAAGG+TGG	-	chr1_2:19465457-19465476	Msa0061390:CDS	40.0%
	TCAACATAGAACCTGCATCT+TGG	+	chr1_2:19465492-19465511	None:intergenic	40.0%
	GATGTTTGCATATTACGTGC+AGG	-	chr1_2:19465523-19465542	Msa0061390:CDS	40.0%
	GAAACCAATCCAAATAGCTC+CGG	+	chr1_2:19465755-19465774	None:intergenic	40.0%
	TAAGGGTGATGTTTGTTTGC+AGG	-	chr1_2:19465953-19465972	Msa0061390:five_prime_UTR	40.0%
	GCAAAATGGACATCTTCTCA+TGG	-	chr1_2:19466006-19466025	Msa0061390:five_prime_UTR	40.0%
	AAATGGACATCTTCTCATGG+TGG	-	chr1_2:19466009-19466028	Msa0061390:five_prime_UTR	40.0%
	ATCAAGACGTGCATGATTCA+CGG	+	chr1_2:19466249-19466268	None:intergenic	40.0%
!	ACGATGACCGAGAGATTTTG+AGG	+	chr1_2:19464257-19464276	None:intergenic	45.0%
	TAAAGTGGGGTGAGTGTGAA+AGG	+	chr1_2:19464524-19464543	None:intergenic	45.0%
	TTCTTGTCTTGGGGAAATGG+GGG	+	chr1_2:19464565-19464584	None:intergenic	45.0%
	GTTCTTGTCTTGGGGAAATG+GGG	+	chr1_2:19464566-19464585	None:intergenic	45.0%
!	AAAAGTCGTCTACGGTGTCA+AGG	+	chr1_2:19464660-19464679	None:intergenic	45.0%
	TGCTTCAGCGTACTTGTCAT+CGG	+	chr1_2:19464731-19464750	None:intergenic	45.0%
	AGTGATGACAGAGGCCAATA+AGG	+	chr1_2:19464770-19464789	None:intergenic	45.0%
	TTGGTGAGAAGTGATGACAG+AGG	+	chr1_2:19464779-19464798	None:intergenic	45.0%
!	CCCTTCATCCTTTTCCTTCT+TGG	-	chr1_2:19464801-19464820	Msa0061390:intron	45.0%
	GCCAAGAAGGAAAAGGATGA+AGG	+	chr1_2:19464805-19464824	None:intergenic	45.0%
	GATGCTACACACGGTAATGA+TGG	+	chr1_2:19464835-19464854	None:intergenic	45.0%
!	CAATGGTGGTGACTGCATAA+GGG	+	chr1_2:19464899-19464918	None:intergenic	45.0%
	TGCGGAAACAAAAAGGACTG+AGG	-	chr1_2:19465011-19465030	Msa0061390:CDS	45.0%
	AAAGGACTGAGGAGATGTTC+AGG	-	chr1_2:19465022-19465041	Msa0061390:CDS	45.0%
!	TTGTCCTGGTTTGAACTGCA+AGG	-	chr1_2:19465131-19465150	Msa0061390:CDS	45.0%
!	TGTCCTGGTTTGAACTGCAA+GGG	-	chr1_2:19465132-19465151	Msa0061390:CDS	45.0%
	GTGGAATGATGCATTGTGTG+AGG	-	chr1_2:19465209-19465228	Msa0061390:CDS	45.0%
	AAGGGAAGATCTCCTTGTGA+GGG	-	chr1_2:19465434-19465453	Msa0061390:CDS	45.0%
	GGGAGCTGGCTAATAAGAAA+AGG	-	chr1_2:19465454-19465473	Msa0061390:CDS	45.0%
	TGTCTTGGCATTCATTTGGC+CGG	-	chr1_2:19465733-19465752	Msa0061390:CDS	45.0%
	TTCATTTGGCCGGAGCTATT+TGG	-	chr1_2:19465743-19465762	Msa0061390:CDS	45.0%
	TAAGGAACTTCCCCTATCCA+TGG	+	chr1_2:19466103-19466122	None:intergenic	45.0%
	GGTGGAGGCTATATCTTTAC+AGG	+	chr1_2:19466333-19466352	None:intergenic	45.0%
!	CAAGAGTCTCTAAGAAAGGG+TGG	+	chr1_2:19466351-19466370	None:intergenic	45.0%
	CACCCTTTCTTAGAGACTCT+TGG	-	chr1_2:19466349-19466368	Msa0061390:five_prime_UTR	45.0%
!	ACGATGACCGAGAGATTTTG+AGG	+	chr1_2:19464257-19464276	None:intergenic	45.0%
	TAAAGTGGGGTGAGTGTGAA+AGG	+	chr1_2:19464524-19464543	None:intergenic	45.0%
	TTCTTGTCTTGGGGAAATGG+GGG	+	chr1_2:19464565-19464584	None:intergenic	45.0%
	GTTCTTGTCTTGGGGAAATG+GGG	+	chr1_2:19464566-19464585	None:intergenic	45.0%
!	AAAAGTCGTCTACGGTGTCA+AGG	+	chr1_2:19464660-19464679	None:intergenic	45.0%
	TGCTTCAGCGTACTTGTCAT+CGG	+	chr1_2:19464731-19464750	None:intergenic	45.0%
	AGTGATGACAGAGGCCAATA+AGG	+	chr1_2:19464770-19464789	None:intergenic	45.0%
	TTGGTGAGAAGTGATGACAG+AGG	+	chr1_2:19464779-19464798	None:intergenic	45.0%
!	CCCTTCATCCTTTTCCTTCT+TGG	-	chr1_2:19464801-19464820	Msa0061390:intron	45.0%
	GCCAAGAAGGAAAAGGATGA+AGG	+	chr1_2:19464805-19464824	None:intergenic	45.0%
	GATGCTACACACGGTAATGA+TGG	+	chr1_2:19464835-19464854	None:intergenic	45.0%
!	CAATGGTGGTGACTGCATAA+GGG	+	chr1_2:19464899-19464918	None:intergenic	45.0%
	TGCGGAAACAAAAAGGACTG+AGG	-	chr1_2:19465011-19465030	Msa0061390:CDS	45.0%
	AAAGGACTGAGGAGATGTTC+AGG	-	chr1_2:19465022-19465041	Msa0061390:CDS	45.0%
!	TTGTCCTGGTTTGAACTGCA+AGG	-	chr1_2:19465131-19465150	Msa0061390:CDS	45.0%
!	TGTCCTGGTTTGAACTGCAA+GGG	-	chr1_2:19465132-19465151	Msa0061390:CDS	45.0%
	GTGGAATGATGCATTGTGTG+AGG	-	chr1_2:19465209-19465228	Msa0061390:CDS	45.0%
	AAGGGAAGATCTCCTTGTGA+GGG	-	chr1_2:19465434-19465453	Msa0061390:CDS	45.0%
	GGGAGCTGGCTAATAAGAAA+AGG	-	chr1_2:19465454-19465473	Msa0061390:CDS	45.0%
	TGTCTTGGCATTCATTTGGC+CGG	-	chr1_2:19465733-19465752	Msa0061390:CDS	45.0%
	TTCATTTGGCCGGAGCTATT+TGG	-	chr1_2:19465743-19465762	Msa0061390:CDS	45.0%
	TAAGGAACTTCCCCTATCCA+TGG	+	chr1_2:19466103-19466122	None:intergenic	45.0%
	GGTGGAGGCTATATCTTTAC+AGG	+	chr1_2:19466333-19466352	None:intergenic	45.0%
!	CAAGAGTCTCTAAGAAAGGG+TGG	+	chr1_2:19466351-19466370	None:intergenic	45.0%
	CACCCTTTCTTAGAGACTCT+TGG	-	chr1_2:19466349-19466368	Msa0061390:five_prime_UTR	45.0%
	GGGTGAGTGTGAAAGGTTAG+TGG	+	chr1_2:19464517-19464536	None:intergenic	50.0%
	AGGACAAGGAATGAGGAGGA+TGG	+	chr1_2:19464640-19464659	None:intergenic	50.0%
	GTCAAGGACAAGGAATGAGG+AGG	+	chr1_2:19464644-19464663	None:intergenic	50.0%
	GGTGTCAAGGACAAGGAATG+AGG	+	chr1_2:19464647-19464666	None:intergenic	50.0%
	CGTACTTGTCATCGGAGACA+GGG	+	chr1_2:19464723-19464742	None:intergenic	50.0%
!	TGGTGGTGCCAAGAAGGAAA+AGG	+	chr1_2:19464812-19464831	None:intergenic	50.0%
!!	ACACACGGTAATGATGGTGG+TGG	+	chr1_2:19464829-19464848	None:intergenic	50.0%
	GCTACACACGGTAATGATGG+TGG	+	chr1_2:19464832-19464851	None:intergenic	50.0%
	GGTGACTGCATAAGGGTTTG+AGG	+	chr1_2:19464892-19464911	None:intergenic	50.0%
!	GCAATGGTGGTGACTGCATA+AGG	+	chr1_2:19464900-19464919	None:intergenic	50.0%
	GAAGATGCTACGCAGTGCAA+TGG	+	chr1_2:19464916-19464935	None:intergenic	50.0%
	CTGCGTAGCATCTTCATCGA+AGG	-	chr1_2:19464921-19464940	Msa0061390:intron	50.0%
	ACACCCTTGCAGTTCAAACC+AGG	+	chr1_2:19465138-19465157	None:intergenic	50.0%
	GTGCAAGCTGTCATGTCACT+TGG	-	chr1_2:19465358-19465377	Msa0061390:CDS	50.0%
!	TGTCATGTCACTTGGCATCC+TGG	-	chr1_2:19465366-19465385	Msa0061390:CDS	50.0%
!	GTCATGTCACTTGGCATCCT+GGG	-	chr1_2:19465367-19465386	Msa0061390:CDS	50.0%
!	TCATGTCACTTGGCATCCTG+GGG	-	chr1_2:19465368-19465387	Msa0061390:CDS	50.0%
	GAAGGGAAGATCTCCTTGTG+AGG	-	chr1_2:19465433-19465452	Msa0061390:CDS	50.0%
	TATTAGCCAGCTCCCTCACA+AGG	+	chr1_2:19465449-19465468	None:intergenic	50.0%
!!	GGAAAAGGTGTCCAAGATGC+AGG	-	chr1_2:19465478-19465497	Msa0061390:CDS	50.0%
	TTGGCCGGAGCTATTTGGAT+TGG	-	chr1_2:19465748-19465767	Msa0061390:CDS	50.0%
	GCTATGCTTGCGGTGCAAAA+TGG	-	chr1_2:19465992-19466011	Msa0061390:five_prime_UTR	50.0%
!	GAGTCTCTAAGAAAGGGTGG+AGG	+	chr1_2:19466348-19466367	None:intergenic	50.0%
	GGGTGAGTGTGAAAGGTTAG+TGG	+	chr1_2:19464517-19464536	None:intergenic	50.0%
	AGGACAAGGAATGAGGAGGA+TGG	+	chr1_2:19464640-19464659	None:intergenic	50.0%
	GTCAAGGACAAGGAATGAGG+AGG	+	chr1_2:19464644-19464663	None:intergenic	50.0%
	GGTGTCAAGGACAAGGAATG+AGG	+	chr1_2:19464647-19464666	None:intergenic	50.0%
	CGTACTTGTCATCGGAGACA+GGG	+	chr1_2:19464723-19464742	None:intergenic	50.0%
!	TGGTGGTGCCAAGAAGGAAA+AGG	+	chr1_2:19464812-19464831	None:intergenic	50.0%
!!	ACACACGGTAATGATGGTGG+TGG	+	chr1_2:19464829-19464848	None:intergenic	50.0%
	GCTACACACGGTAATGATGG+TGG	+	chr1_2:19464832-19464851	None:intergenic	50.0%
	GGTGACTGCATAAGGGTTTG+AGG	+	chr1_2:19464892-19464911	None:intergenic	50.0%
!	GCAATGGTGGTGACTGCATA+AGG	+	chr1_2:19464900-19464919	None:intergenic	50.0%
	GAAGATGCTACGCAGTGCAA+TGG	+	chr1_2:19464916-19464935	None:intergenic	50.0%
	CTGCGTAGCATCTTCATCGA+AGG	-	chr1_2:19464921-19464940	Msa0061390:intron	50.0%
	ACACCCTTGCAGTTCAAACC+AGG	+	chr1_2:19465138-19465157	None:intergenic	50.0%
	GTGCAAGCTGTCATGTCACT+TGG	-	chr1_2:19465358-19465377	Msa0061390:CDS	50.0%
!	TGTCATGTCACTTGGCATCC+TGG	-	chr1_2:19465366-19465385	Msa0061390:CDS	50.0%
!	GTCATGTCACTTGGCATCCT+GGG	-	chr1_2:19465367-19465386	Msa0061390:CDS	50.0%
!	TCATGTCACTTGGCATCCTG+GGG	-	chr1_2:19465368-19465387	Msa0061390:CDS	50.0%
	GAAGGGAAGATCTCCTTGTG+AGG	-	chr1_2:19465433-19465452	Msa0061390:CDS	50.0%
	TATTAGCCAGCTCCCTCACA+AGG	+	chr1_2:19465449-19465468	None:intergenic	50.0%
!!	GGAAAAGGTGTCCAAGATGC+AGG	-	chr1_2:19465478-19465497	Msa0061390:CDS	50.0%
	TTGGCCGGAGCTATTTGGAT+TGG	-	chr1_2:19465748-19465767	Msa0061390:CDS	50.0%
	GCTATGCTTGCGGTGCAAAA+TGG	-	chr1_2:19465992-19466011	Msa0061390:five_prime_UTR	50.0%
!	GAGTCTCTAAGAAAGGGTGG+AGG	+	chr1_2:19466348-19466367	None:intergenic	50.0%
	TTGTCTTGGGGAAATGGGGG+AGG	+	chr1_2:19464562-19464581	None:intergenic	55.0%
	GAGGATGGTTGTTGCGCCAT+TGG	+	chr1_2:19464625-19464644	None:intergenic	55.0%
!	CGTCTACGGTGTCAAGGACA+AGG	+	chr1_2:19464654-19464673	None:intergenic	55.0%
	CATCGGAGACAGGGACGTTA+GGG	+	chr1_2:19464714-19464733	None:intergenic	55.0%
	TCATCGGAGACAGGGACGTT+AGG	+	chr1_2:19464715-19464734	None:intergenic	55.0%
	GCGTACTTGTCATCGGAGAC+AGG	+	chr1_2:19464724-19464743	None:intergenic	55.0%
!!	TGATGGTGGTGGTGCCAAGA+AGG	+	chr1_2:19464818-19464837	None:intergenic	55.0%
	GATGCTACGCAGTGCAATGG+TGG	+	chr1_2:19464913-19464932	None:intergenic	55.0%
	AACTCCTCACAACCAACCCC+AGG	+	chr1_2:19465387-19465406	None:intergenic	55.0%
	AGATCTCCTTGTGAGGGAGC+TGG	-	chr1_2:19465440-19465459	Msa0061390:CDS	55.0%
	TTGTCTTGGGGAAATGGGGG+AGG	+	chr1_2:19464562-19464581	None:intergenic	55.0%
	GAGGATGGTTGTTGCGCCAT+TGG	+	chr1_2:19464625-19464644	None:intergenic	55.0%
!	CGTCTACGGTGTCAAGGACA+AGG	+	chr1_2:19464654-19464673	None:intergenic	55.0%
	CATCGGAGACAGGGACGTTA+GGG	+	chr1_2:19464714-19464733	None:intergenic	55.0%
	TCATCGGAGACAGGGACGTT+AGG	+	chr1_2:19464715-19464734	None:intergenic	55.0%
	GCGTACTTGTCATCGGAGAC+AGG	+	chr1_2:19464724-19464743	None:intergenic	55.0%
!!	TGATGGTGGTGGTGCCAAGA+AGG	+	chr1_2:19464818-19464837	None:intergenic	55.0%
	GATGCTACGCAGTGCAATGG+TGG	+	chr1_2:19464913-19464932	None:intergenic	55.0%
	AACTCCTCACAACCAACCCC+AGG	+	chr1_2:19465387-19465406	None:intergenic	55.0%
	AGATCTCCTTGTGAGGGAGC+TGG	-	chr1_2:19465440-19465459	Msa0061390:CDS	55.0%
	GTCACTTGGCATCCTGGGGT+TGG	-	chr1_2:19465372-19465391	Msa0061390:CDS	60.0%
!!	GCATCCTGGGGTTGGTTGTG+AGG	-	chr1_2:19465380-19465399	Msa0061390:CDS	60.0%
	GTCACTTGGCATCCTGGGGT+TGG	-	chr1_2:19465372-19465391	Msa0061390:CDS	60.0%
!!	GCATCCTGGGGTTGGTTGTG+AGG	-	chr1_2:19465380-19465399	Msa0061390:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	19464085	19466417	19464085	ID=Msa0061390;Name=Msa0061390
chr1_2	mRNA	19464085	19466417	19464085	ID=Msa0061390-mRNA-1;Parent=Msa0061390;Name=Msa0061390-mRNA-1;_AED=0.17;_eAED=0.17;_QI=540\|1\|1\|1\|1\|1\|2\|370\|330
chr1_2	exon	19464085	19464527	19464085	ID=Msa0061390-mRNA-1:exon:7568;Parent=Msa0061390-mRNA-1
chr1_2	exon	19464958	19466417	19464958	ID=Msa0061390-mRNA-1:exon:7567;Parent=Msa0061390-mRNA-1
chr1_2	five_prime_UTR	19465878	19466417	19465878	ID=Msa0061390-mRNA-1:five_prime_utr;Parent=Msa0061390-mRNA-1
chr1_2	CDS	19464958	19465877	19464958	ID=Msa0061390-mRNA-1:cds;Parent=Msa0061390-mRNA-1
chr1_2	CDS	19464455	19464527	19464455	ID=Msa0061390-mRNA-1:cds;Parent=Msa0061390-mRNA-1
chr1_2	three_prime_UTR	19464085	19464454	19464085	ID=Msa0061390-mRNA-1:three_prime_utr;Parent=Msa0061390-mRNA-1

Gene Sequence

>Msa0061390

ATGGCGCAACAACCATCCTCCTCATTCCTTGTCCTTGACACCGTAGACGACTTTTACTTCTCCGTTGTCTCCGACAATGAAATTGACCCTAACGTCCCTGTCTCCGATGACAAGTACGCTGAAGCATTACAGTTTCAAGAAACCTTATTGGCCTCTGTCATCACTTCTCACCAAAACCCTTCATCCTTTTCCTTCTTGGCACCACCACCATCATTACCGTGTGTAGCATCTTCATCAAAAACAGTCTCTGAAGAGATACAGTTTCCTCAAACCCTTATGCAGTCACCACCATTGCACTGCGTAGCATCTTCATCGAAGGCTATTGATGTTGGCATTGTCTTCAAAGCTGATGAACAGTCTTCTCCGATCATCATTTGCGAGATTTGTGCGGAAACAAAAAGGACTGAGGAGATGTTCAGGAATCAAATATGTTACCATTCATTTTGTTCTGAATGTGTTGTCAAACAAGTGGCTACAAAAATCCAAGACAGCATAACAAATGTGTCTTGTCCTGGTTTGAACTGCAAGGGTGTGTTAGAGCTTGAATCTTGCAGGTCATTGCTTCCAAAAGAGTTGATTGATAGGTGGAATGATGCATTGTGTGAGGCTTTTATTCTTGCTGTTCCTAAGTTCTATTGCCCGTTTAAGGATTGTTCTGAAATGTTGCTTGATGAGGATGAAGGAAGAGAAGATGTTAGGGAATCTGAGTGTCCTTCTTGTCATAGATTGTTTTGTGCAAGCTGTCATGTCACTTGGCATCCTGGGGTTGGTTGTGAGGAGTTTCAAACAATGAATGTGGATGAAAGAGGAAGGGAAGATCTCCTTGTGAGGGAGCTGGCTAATAAGAAAAGGTGGAAAAGGTGTCCAAGATGCAGGTTCTATGTTGAAAAAAGGGATGGATGTTTGCATATTACGTGCAGGTGCAAATTTGAGTTTTGCTATGCTTGCGGTGCAAAATGGACATCTTCTCATGGTGGTTGTCAAAGAAATTAG

Protein sequence

>Msa0061390

MAQQPSSSFLVLDTVDDFYFSVVSDNEIDPNVPVSDDKYAEALQFQETLLASVITSHQNPSSFSFLAPPPSLPCVASSSKTVSEEIQFPQTLMQSPPLHCVASSSKAIDVGIVFKADEQSSPIIICEICAETKRTEEMFRNQICYHSFCSECVVKQVATKIQDSITNVSCPGLNCKGVLELESCRSLLPKELIDRWNDALCEAFILAVPKFYCPFKDCSEMLLDEDEGREDVRESECPSCHRLFCASCHVTWHPGVGCEEFQTMNVDERGREDLLVRELANKKRWKRCPRCRFYVEKRDGCLHITCRCKFEFCYACGAKWTSSHGGCQRN*