Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069010 | sp|Q9SYM1|MSL6_ARATH | 46.683 | 407 | 120 | 9 | 1 | 364 | 102 | 454 | 1.23e-95 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069010 | G7IDC2 | 88.971 | 408 | 13 | 2 | 1 | 376 | 118 | 525 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044840 | Msa0069010 | 0.808416 | 3.130407e-50 | -8.615850e-47 |
| Msa0044970 | Msa0069010 | 0.897658 | 1.136051e-76 | -8.615850e-47 |
| Msa0069010 | Msa0183120 | 0.887770 | 1.065841e-72 | -8.615850e-47 |
| Msa0069010 | Msa1374930 | 0.825099 | 5.637923e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069010 | MtrunA17_Chr1g0211561 | 88.971 | 408 | 13 | 2 | 1 | 376 | 118 | 525 | 0.0 | 714 |
| Msa0069010 | MtrunA17_Chr3g0136211 | 36.638 | 232 | 103 | 5 | 136 | 325 | 143 | 372 | 2.61e-38 | 145 |
| Msa0069010 | MtrunA17_Chr3g0136161 | 33.043 | 230 | 114 | 2 | 136 | 325 | 144 | 373 | 3.83e-36 | 139 |
| Msa0069010 | MtrunA17_Chr3g0136141 | 35.204 | 196 | 85 | 4 | 172 | 325 | 143 | 338 | 2.03e-31 | 125 |
| Msa0069010 | MtrunA17_Chr2g0300341 | 38.650 | 163 | 68 | 2 | 196 | 326 | 174 | 336 | 9.35e-31 | 124 |
| Msa0069010 | MtrunA17_Chr8g0369461 | 34.706 | 170 | 81 | 1 | 184 | 323 | 130 | 299 | 9.05e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069010 | AT1G78610.1 | 46.683 | 407 | 120 | 9 | 1 | 364 | 102 | 454 | 1.25e-96 | 306 |
| Msa0069010 | AT2G17010.2 | 55.116 | 303 | 93 | 6 | 98 | 367 | 222 | 514 | 1.03e-93 | 294 |
| Msa0069010 | AT2G17010.1 | 55.116 | 303 | 93 | 6 | 98 | 367 | 222 | 514 | 3.93e-91 | 293 |
| Msa0069010 | AT3G14810.1 | 40.284 | 422 | 153 | 11 | 1 | 366 | 105 | 483 | 3.38e-84 | 274 |
| Msa0069010 | AT1G53470.1 | 41.844 | 423 | 167 | 12 | 1 | 376 | 88 | 478 | 4.68e-79 | 260 |
| Msa0069010 | AT2G17000.2 | 49.007 | 302 | 109 | 5 | 99 | 365 | 154 | 445 | 2.41e-77 | 255 |
| Msa0069010 | AT2G17000.1 | 49.007 | 302 | 109 | 5 | 99 | 365 | 154 | 445 | 3.61e-77 | 254 |
| Msa0069010 | AT3G14810.2 | 37.437 | 398 | 165 | 13 | 1 | 366 | 105 | 450 | 1.45e-63 | 218 |
| Msa0069010 | AT5G12080.1 | 34.742 | 213 | 101 | 3 | 159 | 339 | 143 | 349 | 4.34e-34 | 134 |
| Msa0069010 | AT5G12080.2 | 34.742 | 213 | 101 | 3 | 159 | 339 | 143 | 349 | 4.34e-34 | 134 |
| Msa0069010 | AT5G12080.3 | 34.742 | 213 | 101 | 3 | 159 | 339 | 143 | 349 | 4.34e-34 | 134 |
| Msa0069010 | AT5G19520.1 | 37.572 | 173 | 76 | 2 | 185 | 325 | 181 | 353 | 6.65e-33 | 130 |
| Msa0069010 | AT5G19520.2 | 37.572 | 173 | 76 | 2 | 185 | 325 | 181 | 353 | 6.65e-33 | 130 |
| Msa0069010 | AT1G49260.1 | 30.000 | 110 | 76 | 1 | 234 | 343 | 14 | 122 | 5.53e-11 | 60.8 |
Find 104 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAACACATTTCAGTCTT+TGG | 0.216359 | 1_2:+36354810 | Msa0069010:CDS |
| GGAAAATCCTCTTCCATAAA+AGG | 0.232230 | 1_2:-36354776 | None:intergenic |
| TGGTTTCTGATTGGGTTATT+AGG | 0.232570 | 1_2:+36354978 | Msa0069010:CDS |
| TAAAACTAAGTCCAGATTAA+TGG | 0.259824 | 1_2:+36354652 | Msa0069010:CDS |
| CTCTGTGGCAGCTTAAGTTT+TGG | 0.268313 | 1_2:+36354915 | Msa0069010:CDS |
| GTCTTTGGATTCTTCTTGAA+TGG | 0.297980 | 1_2:+36354825 | Msa0069010:CDS |
| TCAATATGTGACCAAGGTTT+TGG | 0.301334 | 1_2:+36355170 | Msa0069010:CDS |
| AACACTCTCGGGGCCGCCTT+TGG | 0.329276 | 1_2:+36355323 | Msa0069010:CDS |
| AATGACGACGGTCGTGATTA+GGG | 0.330012 | 1_2:-36354517 | None:intergenic |
| TATGTCATTGGACATGGATT+TGG | 0.336553 | 1_2:+36354283 | None:intergenic |
| GAATGACGACGGTCGTGATT+AGG | 0.339038 | 1_2:-36354518 | None:intergenic |
| ATGTGAGTACATACTTTGAT+AGG | 0.348611 | 1_2:+36355265 | Msa0069010:CDS |
| GGTGAAAACTCTAGTGGTTA+AGG | 0.355532 | 1_2:+36355224 | Msa0069010:CDS |
| TGTTCTAATATGTGGTAGAT+TGG | 0.372968 | 1_2:+36354958 | Msa0069010:CDS |
| AAAGAACCCTCTTTCTCAAT+AGG | 0.374828 | 1_2:-36355030 | None:intergenic |
| AACCTTCCACTCTTGATGTT+AGG | 0.378450 | 1_2:-36355453 | None:intergenic |
| CTGTTTCTTGGTGGGTACTT+TGG | 0.387096 | 1_2:+36355194 | Msa0069010:CDS |
| CAGCAAGGATTCGCCGTCAA+TGG | 0.388996 | 1_2:+36354469 | Msa0069010:CDS |
| ATCGGGTGGGTCCATTAATC+TGG | 0.405460 | 1_2:-36354663 | None:intergenic |
| TGGTAGATTGGTTTCTGATT+GGG | 0.406121 | 1_2:+36354970 | Msa0069010:CDS |
| GGTGGGTACTTTGGTGTGGT+TGG | 0.411905 | 1_2:+36355203 | Msa0069010:CDS |
| GTGGTAGATTGGTTTCTGAT+TGG | 0.422054 | 1_2:+36354969 | Msa0069010:CDS |
| TTTGAGTGTTCCTTTGTTGA+GGG | 0.432061 | 1_2:+36354886 | Msa0069010:CDS |
| AATGGACCCACCCGATGAAC+CGG | 0.440292 | 1_2:+36354670 | Msa0069010:CDS |
| TAGGAAAGGCACTAGCTCTT+AGG | 0.441340 | 1_2:-36355434 | None:intergenic |
| ACTCTCGGGGCCGCCTTTGG+TGG | 0.444265 | 1_2:+36355326 | Msa0069010:CDS |
| TTGCTGTGTCTTCTCCGAAC+AGG | 0.449131 | 1_2:-36354452 | None:intergenic |
| GGAATTTCCTATTGAGAAAG+AGG | 0.459561 | 1_2:+36355023 | Msa0069010:CDS |
| AGCAAGGATTCGCCGTCAAT+GGG | 0.468587 | 1_2:+36354470 | Msa0069010:CDS |
| AGATCTTCTATCCGGTTCAT+CGG | 0.470858 | 1_2:-36354681 | None:intergenic |
| CTTTGAGTGTTCCTTTGTTG+AGG | 0.472992 | 1_2:+36354885 | Msa0069010:CDS |
| TTCTATCCGGTTCATCGGGT+GGG | 0.475815 | 1_2:-36354676 | None:intergenic |
| CGAGTTGAAAGTTAGTTTCG+AGG | 0.476779 | 1_2:+36354388 | Msa0069010:CDS |
| TCACCTGCGGGTAACGGTGG+TGG | 0.488405 | 1_2:+36354545 | Msa0069010:CDS |
| CGGAAAGTTAACGCCGGTGG+AGG | 0.491627 | 1_2:+36354343 | Msa0069010:CDS |
| CGTCAATGGGTGAGTATGCT+CGG | 0.493782 | 1_2:+36354483 | Msa0069010:CDS |
| ATCCCATTCGAATTTGAAGC+TGG | 0.495504 | 1_2:-36354413 | None:intergenic |
| TCGAAAGGCGGAAGAGGAAG+AGG | 0.498977 | 1_2:+36355353 | Msa0069010:CDS |
| AGAGGAAAGGCTTGCTGATG+AGG | 0.500044 | 1_2:+36355371 | Msa0069010:CDS |
| GATGAACCGGATAGAAGATC+TGG | 0.501788 | 1_2:+36354683 | Msa0069010:CDS |
| GATCTTCTATCCGGTTCATC+GGG | 0.503203 | 1_2:-36354680 | None:intergenic |
| GGAGATTCGAAAGGCGGAAG+AGG | 0.504692 | 1_2:+36355347 | Msa0069010:CDS |
| CGGTGATATGTCATTGGACA+TGG | 0.505087 | 1_2:+36354277 | None:intergenic |
| CCTCCAATGCTTCGTTTGAG+AGG | 0.506341 | 1_2:+36354591 | Msa0069010:CDS |
| GCACTAGCTCTTAGGTCAGC+AGG | 0.507575 | 1_2:-36355426 | None:intergenic |
| AACCAGCTTCAAATTCGAAT+GGG | 0.508508 | 1_2:+36354411 | Msa0069010:CDS |
| AAGCTGTGAACGATCCTGTT+CGG | 0.508743 | 1_2:+36354438 | Msa0069010:CDS |
| CCTCTCAAACGAAGCATTGG+AGG | 0.508854 | 1_2:-36354591 | None:intergenic |
| GTTTGTGATCGAAACACTCT+CGG | 0.513851 | 1_2:+36355311 | Msa0069010:CDS |
| TGCCTCCGGTGATATGTCAT+TGG | 0.514202 | 1_2:+36354271 | None:intergenic |
| CTTCTATCCGGTTCATCGGG+TGG | 0.521257 | 1_2:-36354677 | None:intergenic |
| CCACCGTTACCCGCAGGTGA+TGG | 0.523525 | 1_2:-36354542 | None:intergenic |
| GTTCCTCTCAAACGAAGCAT+TGG | 0.529720 | 1_2:-36354594 | None:intergenic |
| ACCCGACCAGATCTTCTATC+CGG | 0.536055 | 1_2:-36354689 | None:intergenic |
| TCTCCATCACCTGCGGGTAA+CGG | 0.536446 | 1_2:+36354539 | Msa0069010:CDS |
| GTTCAGAAGTTGCAGAATGC+CGG | 0.537436 | 1_2:+36355393 | Msa0069010:CDS |
| ATGGAGGAGCTTCAGAATGA+AGG | 0.543397 | 1_2:+36354308 | Msa0069010:CDS |
| AACTTGCCACTCTTAACCAC+AGG | 0.546689 | 1_2:-36355502 | None:intergenic |
| ACCGGATAGAAGATCTGGTC+GGG | 0.546747 | 1_2:+36354688 | Msa0069010:CDS |
| ATGATTCTTGTTCTAATATG+TGG | 0.547822 | 1_2:+36354950 | Msa0069010:CDS |
| GGACATGGATTTGGAGATGG+AGG | 0.548013 | 1_2:+36354292 | Msa0069010:CDS |
| CGTCATTCTCCATCACCTGC+GGG | 0.550193 | 1_2:+36354533 | Msa0069010:CDS |
| ACATCAAGAGTGGAAGGTTG+AGG | 0.551793 | 1_2:+36355457 | Msa0069010:CDS |
| AACTCGCGTTGAATCACCGT+GGG | 0.553700 | 1_2:-36354371 | None:intergenic |
| TTTGTGATCGAAACACTCTC+GGG | 0.554279 | 1_2:+36355312 | Msa0069010:CDS |
| GCCTTTCGAATCTCCACCAA+AGG | 0.555304 | 1_2:-36355339 | None:intergenic |
| TCTGGGATGATTGGGAGGAA+AGG | 0.558110 | 1_2:+36354734 | Msa0069010:CDS |
| ATGACGACGGTCGTGATTAG+GGG | 0.560581 | 1_2:-36354516 | None:intergenic |
| AATGAAGGTAACGTCGCTGA+CGG | 0.565304 | 1_2:+36354323 | Msa0069010:CDS |
| GAACCAGCTTCAAATTCGAA+TGG | 0.566244 | 1_2:+36354410 | Msa0069010:CDS |
| ACCGTGGGAGATTCCTCCAC+CGG | 0.568309 | 1_2:-36354356 | None:intergenic |
| TTCCTAACATCAAGAGTGGA+AGG | 0.569646 | 1_2:+36355451 | Msa0069010:CDS |
| ATTGGACATGGATTTGGAGA+TGG | 0.578623 | 1_2:+36354289 | Msa0069010:CDS |
| GCCTTTCCTAACATCAAGAG+TGG | 0.581351 | 1_2:+36355447 | Msa0069010:CDS |
| GCCTTTGGTGGAGATTCGAA+AGG | 0.585486 | 1_2:+36355338 | Msa0069010:CDS |
| TCCACTCTTGATGTTAGGAA+AGG | 0.591698 | 1_2:-36355448 | None:intergenic |
| TCACCACCACCGTTACCCGC+AGG | 0.592576 | 1_2:-36354548 | None:intergenic |
| CAAGAAACAGACCAAAACCT+TGG | 0.596695 | 1_2:-36355181 | None:intergenic |
| TCTTGGTGGGTACTTTGGTG+TGG | 0.598050 | 1_2:+36355199 | Msa0069010:CDS |
| TGACGACGGTCGTGATTAGG+GGG | 0.598378 | 1_2:-36354515 | None:intergenic |
| TAACGGTGGTGGTGATTGCG+AGG | 0.599664 | 1_2:+36354556 | Msa0069010:CDS |
| AAACCTTGGTCACATATTGA+AGG | 0.599670 | 1_2:-36355167 | None:intergenic |
| TTTCGAATCTCCACCAAAGG+CGG | 0.604367 | 1_2:-36355336 | None:intergenic |
| GAATTTCCTATTGAGAAAGA+GGG | 0.608181 | 1_2:+36355024 | Msa0069010:CDS |
| CCATCACCTGCGGGTAACGG+TGG | 0.611209 | 1_2:+36354542 | Msa0069010:CDS |
| CGAGCATACTCACCCATTGA+CGG | 0.614333 | 1_2:-36354482 | None:intergenic |
| AGGCGGAAGAGGAAGAGGAA+AGG | 0.622102 | 1_2:+36355358 | Msa0069010:CDS |
| TCGTCATTCTCCATCACCTG+CGG | 0.624845 | 1_2:+36354532 | Msa0069010:CDS |
| GTCAGCAGGTATGCTAACAC+CGG | 0.644403 | 1_2:-36355412 | None:intergenic |
| AACCGGATAGAAGATCTGGT+CGG | 0.644852 | 1_2:+36354687 | Msa0069010:CDS |
| TTTGGTGGAGATTCGAAAGG+CGG | 0.649479 | 1_2:+36355341 | Msa0069010:CDS |
| AAGAGTGGAAGGTTGAGGAG+TGG | 0.649657 | 1_2:+36355462 | Msa0069010:CDS |
| TGTCCTTCAATATGTGACCA+AGG | 0.652704 | 1_2:+36355164 | Msa0069010:CDS |
| GCCGGTGGAGGAATCTCCCA+CGG | 0.653244 | 1_2:+36354355 | Msa0069010:CDS |
| TGACGGAAAGTTAACGCCGG+TGG | 0.654507 | 1_2:+36354340 | Msa0069010:CDS |
| TGTTCGGAGAAGACACAGCA+AGG | 0.654791 | 1_2:+36354454 | Msa0069010:CDS |
| GTGGTTGGTGAAAACTCTAG+TGG | 0.683918 | 1_2:+36355218 | Msa0069010:CDS |
| CGCTGACGGAAAGTTAACGC+CGG | 0.693881 | 1_2:+36354337 | Msa0069010:CDS |
| ACTTGCCACTCTTAACCACA+GGG | 0.694699 | 1_2:-36355501 | None:intergenic |
| TTGTGATCGAAACACTCTCG+GGG | 0.699008 | 1_2:+36355313 | Msa0069010:CDS |
| AGAGTCTTATCCCTCAACAA+AGG | 0.699553 | 1_2:-36354896 | None:intergenic |
| TGTTGAGGGATAAGACTCTG+TGG | 0.700670 | 1_2:+36354900 | Msa0069010:CDS |
| CAACTCGCGTTGAATCACCG+TGG | 0.722386 | 1_2:-36354372 | None:intergenic |
| CAGGTGATGGAGAATGACGA+CGG | 0.731799 | 1_2:-36354529 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAGTTTGATTTTAATTAT+TGG | + | chr1_2:36354848-36354867 | Msa0069010:CDS | 15.0% |
| !!! | TTGAGTTTGATTTTAATTAT+TGG | + | chr1_2:36354848-36354867 | Msa0069010:CDS | 15.0% |
| ! | TAAAACTAAGTCCAGATTAA+TGG | + | chr1_2:36354652-36354671 | Msa0069010:CDS | 25.0% |
| ! | ATGATTCTTGTTCTAATATG+TGG | + | chr1_2:36354950-36354969 | Msa0069010:CDS | 25.0% |
| ! | TAAAACTAAGTCCAGATTAA+TGG | + | chr1_2:36354652-36354671 | Msa0069010:CDS | 25.0% |
| ! | ATGATTCTTGTTCTAATATG+TGG | + | chr1_2:36354950-36354969 | Msa0069010:CDS | 25.0% |
| ! | TGATGAAGATGATCCTTTTA+TGG | + | chr1_2:36354763-36354782 | Msa0069010:CDS | 30.0% |
| ! | TGTGTTTTCTTATACTCATC+TGG | - | chr1_2:36354800-36354819 | None:intergenic | 30.0% |
| AGAAAACACATTTCAGTCTT+TGG | + | chr1_2:36354810-36354829 | Msa0069010:CDS | 30.0% | |
| TGTTCTAATATGTGGTAGAT+TGG | + | chr1_2:36354958-36354977 | Msa0069010:CDS | 30.0% | |
| ! | TTGCTGTGTTTTGTATTGAA+AGG | + | chr1_2:36355002-36355021 | Msa0069010:CDS | 30.0% |
| GAATTTCCTATTGAGAAAGA+GGG | + | chr1_2:36355024-36355043 | Msa0069010:CDS | 30.0% | |
| !!! | AGGGTTCTTTATTTTGTGTA+TGG | + | chr1_2:36355043-36355062 | Msa0069010:intron | 30.0% |
| !!! | TTTATTTTGTGTATGGTGTC+AGG | + | chr1_2:36355050-36355069 | Msa0069010:intron | 30.0% |
| ATGTGAGTACATACTTTGAT+AGG | + | chr1_2:36355265-36355284 | Msa0069010:CDS | 30.0% | |
| ! | TGATGAAGATGATCCTTTTA+TGG | + | chr1_2:36354763-36354782 | Msa0069010:CDS | 30.0% |
| ! | TGTGTTTTCTTATACTCATC+TGG | - | chr1_2:36354800-36354819 | None:intergenic | 30.0% |
| AGAAAACACATTTCAGTCTT+TGG | + | chr1_2:36354810-36354829 | Msa0069010:CDS | 30.0% | |
| TGTTCTAATATGTGGTAGAT+TGG | + | chr1_2:36354958-36354977 | Msa0069010:CDS | 30.0% | |
| ! | TTGCTGTGTTTTGTATTGAA+AGG | + | chr1_2:36355002-36355021 | Msa0069010:CDS | 30.0% |
| GAATTTCCTATTGAGAAAGA+GGG | + | chr1_2:36355024-36355043 | Msa0069010:CDS | 30.0% | |
| !!! | AGGGTTCTTTATTTTGTGTA+TGG | + | chr1_2:36355043-36355062 | Msa0069010:intron | 30.0% |
| !!! | TTTATTTTGTGTATGGTGTC+AGG | + | chr1_2:36355050-36355069 | Msa0069010:intron | 30.0% |
| ATGTGAGTACATACTTTGAT+AGG | + | chr1_2:36355265-36355284 | Msa0069010:CDS | 30.0% | |
| AACCAGCTTCAAATTCGAAT+GGG | + | chr1_2:36354411-36354430 | Msa0069010:CDS | 35.0% | |
| ! | TTGATTTTCTCTGCATTGAG+AGG | - | chr1_2:36354619-36354638 | None:intergenic | 35.0% |
| ! | AGATGATCCTTTTATGGAAG+AGG | + | chr1_2:36354769-36354788 | Msa0069010:CDS | 35.0% |
| GGAAAATCCTCTTCCATAAA+AGG | - | chr1_2:36354779-36354798 | None:intergenic | 35.0% | |
| GTCTTTGGATTCTTCTTGAA+TGG | + | chr1_2:36354825-36354844 | Msa0069010:CDS | 35.0% | |
| TTTGAGTGTTCCTTTGTTGA+GGG | + | chr1_2:36354886-36354905 | Msa0069010:CDS | 35.0% | |
| !!! | GCAGCTTAAGTTTTGGAAAT+GGG | + | chr1_2:36354922-36354941 | Msa0069010:CDS | 35.0% |
| !! | TGGTAGATTGGTTTCTGATT+GGG | + | chr1_2:36354970-36354989 | Msa0069010:CDS | 35.0% |
| TGGTTTCTGATTGGGTTATT+AGG | + | chr1_2:36354978-36354997 | Msa0069010:CDS | 35.0% | |
| GGAATTTCCTATTGAGAAAG+AGG | + | chr1_2:36355023-36355042 | Msa0069010:CDS | 35.0% | |
| AAAGAACCCTCTTTCTCAAT+AGG | - | chr1_2:36355033-36355052 | None:intergenic | 35.0% | |
| AAGCTGTGCAAAATTGTGTT+TGG | + | chr1_2:36355074-36355093 | Msa0069010:intron | 35.0% | |
| GTGCAAAATTGTGTTTGGTT+AGG | + | chr1_2:36355079-36355098 | Msa0069010:intron | 35.0% | |
| !!! | TTAGGCTTGTTTTGATTGCA+TGG | + | chr1_2:36355097-36355116 | Msa0069010:intron | 35.0% |
| AAACCTTGGTCACATATTGA+AGG | - | chr1_2:36355170-36355189 | None:intergenic | 35.0% | |
| ! | TCAATATGTGACCAAGGTTT+TGG | + | chr1_2:36355170-36355189 | Msa0069010:CDS | 35.0% |
| AACCAGCTTCAAATTCGAAT+GGG | + | chr1_2:36354411-36354430 | Msa0069010:CDS | 35.0% | |
| ! | TTGATTTTCTCTGCATTGAG+AGG | - | chr1_2:36354619-36354638 | None:intergenic | 35.0% |
| ! | AGATGATCCTTTTATGGAAG+AGG | + | chr1_2:36354769-36354788 | Msa0069010:CDS | 35.0% |
| GGAAAATCCTCTTCCATAAA+AGG | - | chr1_2:36354779-36354798 | None:intergenic | 35.0% | |
| GTCTTTGGATTCTTCTTGAA+TGG | + | chr1_2:36354825-36354844 | Msa0069010:CDS | 35.0% | |
| TTTGAGTGTTCCTTTGTTGA+GGG | + | chr1_2:36354886-36354905 | Msa0069010:CDS | 35.0% | |
| !!! | GCAGCTTAAGTTTTGGAAAT+GGG | + | chr1_2:36354922-36354941 | Msa0069010:CDS | 35.0% |
| !! | TGGTAGATTGGTTTCTGATT+GGG | + | chr1_2:36354970-36354989 | Msa0069010:CDS | 35.0% |
| TGGTTTCTGATTGGGTTATT+AGG | + | chr1_2:36354978-36354997 | Msa0069010:CDS | 35.0% | |
| GGAATTTCCTATTGAGAAAG+AGG | + | chr1_2:36355023-36355042 | Msa0069010:CDS | 35.0% | |
| AAAGAACCCTCTTTCTCAAT+AGG | - | chr1_2:36355033-36355052 | None:intergenic | 35.0% | |
| AAGCTGTGCAAAATTGTGTT+TGG | + | chr1_2:36355074-36355093 | Msa0069010:intron | 35.0% | |
| GTGCAAAATTGTGTTTGGTT+AGG | + | chr1_2:36355079-36355098 | Msa0069010:intron | 35.0% | |
| !!! | TTAGGCTTGTTTTGATTGCA+TGG | + | chr1_2:36355097-36355116 | Msa0069010:intron | 35.0% |
| AAACCTTGGTCACATATTGA+AGG | - | chr1_2:36355170-36355189 | None:intergenic | 35.0% | |
| ! | TCAATATGTGACCAAGGTTT+TGG | + | chr1_2:36355170-36355189 | Msa0069010:CDS | 35.0% |
| ATTGGACATGGATTTGGAGA+TGG | + | chr1_2:36354289-36354308 | Msa0069010:CDS | 40.0% | |
| ! | CGAGTTGAAAGTTAGTTTCG+AGG | + | chr1_2:36354388-36354407 | Msa0069010:CDS | 40.0% |
| GAACCAGCTTCAAATTCGAA+TGG | + | chr1_2:36354410-36354429 | Msa0069010:CDS | 40.0% | |
| ! | ATCCCATTCGAATTTGAAGC+TGG | - | chr1_2:36354416-36354435 | None:intergenic | 40.0% |
| AGATCTTCTATCCGGTTCAT+CGG | - | chr1_2:36354684-36354703 | None:intergenic | 40.0% | |
| ! | AAATCGAGTCAGCTTTTGTC+TGG | + | chr1_2:36354716-36354735 | Msa0069010:CDS | 40.0% |
| ! | AATCGAGTCAGCTTTTGTCT+GGG | + | chr1_2:36354717-36354736 | Msa0069010:CDS | 40.0% |
| !! | AGCTTTTGTCTGGGATGATT+GGG | + | chr1_2:36354726-36354745 | Msa0069010:CDS | 40.0% |
| CTTTGAGTGTTCCTTTGTTG+AGG | + | chr1_2:36354885-36354904 | Msa0069010:CDS | 40.0% | |
| ! | AGAGTCTTATCCCTCAACAA+AGG | - | chr1_2:36354899-36354918 | None:intergenic | 40.0% |
| !!! | GGCAGCTTAAGTTTTGGAAA+TGG | + | chr1_2:36354921-36354940 | Msa0069010:CDS | 40.0% |
| !! | GTGGTAGATTGGTTTCTGAT+TGG | + | chr1_2:36354969-36354988 | Msa0069010:CDS | 40.0% |
| TGTCCTTCAATATGTGACCA+AGG | + | chr1_2:36355164-36355183 | Msa0069010:CDS | 40.0% | |
| CAAGAAACAGACCAAAACCT+TGG | - | chr1_2:36355184-36355203 | None:intergenic | 40.0% | |
| !! | CAAGGTTTTGGTCTGTTTCT+TGG | + | chr1_2:36355182-36355201 | Msa0069010:CDS | 40.0% |
| !! | GTTTTGGTCTGTTTCTTGGT+GGG | + | chr1_2:36355186-36355205 | Msa0069010:CDS | 40.0% |
| GGTGAAAACTCTAGTGGTTA+AGG | + | chr1_2:36355224-36355243 | Msa0069010:CDS | 40.0% | |
| GTTTGTGATCGAAACACTCT+CGG | + | chr1_2:36355311-36355330 | Msa0069010:CDS | 40.0% | |
| TTTGTGATCGAAACACTCTC+GGG | + | chr1_2:36355312-36355331 | Msa0069010:CDS | 40.0% | |
| TCCACTCTTGATGTTAGGAA+AGG | - | chr1_2:36355451-36355470 | None:intergenic | 40.0% | |
| TTCCTAACATCAAGAGTGGA+AGG | + | chr1_2:36355451-36355470 | Msa0069010:CDS | 40.0% | |
| AACCTTCCACTCTTGATGTT+AGG | - | chr1_2:36355456-36355475 | None:intergenic | 40.0% | |
| ATTGGACATGGATTTGGAGA+TGG | + | chr1_2:36354289-36354308 | Msa0069010:CDS | 40.0% | |
| ! | CGAGTTGAAAGTTAGTTTCG+AGG | + | chr1_2:36354388-36354407 | Msa0069010:CDS | 40.0% |
| GAACCAGCTTCAAATTCGAA+TGG | + | chr1_2:36354410-36354429 | Msa0069010:CDS | 40.0% | |
| ! | ATCCCATTCGAATTTGAAGC+TGG | - | chr1_2:36354416-36354435 | None:intergenic | 40.0% |
| AGATCTTCTATCCGGTTCAT+CGG | - | chr1_2:36354684-36354703 | None:intergenic | 40.0% | |
| ! | AAATCGAGTCAGCTTTTGTC+TGG | + | chr1_2:36354716-36354735 | Msa0069010:CDS | 40.0% |
| ! | AATCGAGTCAGCTTTTGTCT+GGG | + | chr1_2:36354717-36354736 | Msa0069010:CDS | 40.0% |
| !! | AGCTTTTGTCTGGGATGATT+GGG | + | chr1_2:36354726-36354745 | Msa0069010:CDS | 40.0% |
| CTTTGAGTGTTCCTTTGTTG+AGG | + | chr1_2:36354885-36354904 | Msa0069010:CDS | 40.0% | |
| ! | AGAGTCTTATCCCTCAACAA+AGG | - | chr1_2:36354899-36354918 | None:intergenic | 40.0% |
| !!! | GGCAGCTTAAGTTTTGGAAA+TGG | + | chr1_2:36354921-36354940 | Msa0069010:CDS | 40.0% |
| !! | GTGGTAGATTGGTTTCTGAT+TGG | + | chr1_2:36354969-36354988 | Msa0069010:CDS | 40.0% |
| TGTCCTTCAATATGTGACCA+AGG | + | chr1_2:36355164-36355183 | Msa0069010:CDS | 40.0% | |
| CAAGAAACAGACCAAAACCT+TGG | - | chr1_2:36355184-36355203 | None:intergenic | 40.0% | |
| !! | CAAGGTTTTGGTCTGTTTCT+TGG | + | chr1_2:36355182-36355201 | Msa0069010:CDS | 40.0% |
| !! | GTTTTGGTCTGTTTCTTGGT+GGG | + | chr1_2:36355186-36355205 | Msa0069010:CDS | 40.0% |
| GGTGAAAACTCTAGTGGTTA+AGG | + | chr1_2:36355224-36355243 | Msa0069010:CDS | 40.0% | |
| GTTTGTGATCGAAACACTCT+CGG | + | chr1_2:36355311-36355330 | Msa0069010:CDS | 40.0% | |
| TTTGTGATCGAAACACTCTC+GGG | + | chr1_2:36355312-36355331 | Msa0069010:CDS | 40.0% | |
| TCCACTCTTGATGTTAGGAA+AGG | - | chr1_2:36355451-36355470 | None:intergenic | 40.0% | |
| TTCCTAACATCAAGAGTGGA+AGG | + | chr1_2:36355451-36355470 | Msa0069010:CDS | 40.0% | |
| AACCTTCCACTCTTGATGTT+AGG | - | chr1_2:36355456-36355475 | None:intergenic | 40.0% | |
| ATGGAGGAGCTTCAGAATGA+AGG | + | chr1_2:36354308-36354327 | Msa0069010:CDS | 45.0% | |
| AATGAAGGTAACGTCGCTGA+CGG | + | chr1_2:36354323-36354342 | Msa0069010:CDS | 45.0% | |
| AAGCTGTGAACGATCCTGTT+CGG | + | chr1_2:36354438-36354457 | Msa0069010:CDS | 45.0% | |
| AATGACGACGGTCGTGATTA+GGG | - | chr1_2:36354520-36354539 | None:intergenic | 45.0% | |
| GTTCCTCTCAAACGAAGCAT+TGG | - | chr1_2:36354597-36354616 | None:intergenic | 45.0% | |
| GATCTTCTATCCGGTTCATC+GGG | - | chr1_2:36354683-36354702 | None:intergenic | 45.0% | |
| GATGAACCGGATAGAAGATC+TGG | + | chr1_2:36354683-36354702 | Msa0069010:CDS | 45.0% | |
| AACCGGATAGAAGATCTGGT+CGG | + | chr1_2:36354687-36354706 | Msa0069010:CDS | 45.0% | |
| !! | CAGCTTTTGTCTGGGATGAT+TGG | + | chr1_2:36354725-36354744 | Msa0069010:CDS | 45.0% |
| !! | TTTTGTCTGGGATGATTGGG+AGG | + | chr1_2:36354729-36354748 | Msa0069010:CDS | 45.0% |
| TGTTGAGGGATAAGACTCTG+TGG | + | chr1_2:36354900-36354919 | Msa0069010:CDS | 45.0% | |
| ! | CTCTGTGGCAGCTTAAGTTT+TGG | + | chr1_2:36354915-36354934 | Msa0069010:CDS | 45.0% |
| !! | GGTTTTGGTCTGTTTCTTGG+TGG | + | chr1_2:36355185-36355204 | Msa0069010:CDS | 45.0% |
| ! | CTGTTTCTTGGTGGGTACTT+TGG | + | chr1_2:36355194-36355213 | Msa0069010:CDS | 45.0% |
| !! | GTGGTTGGTGAAAACTCTAG+TGG | + | chr1_2:36355218-36355237 | Msa0069010:CDS | 45.0% |
| TTGTGATCGAAACACTCTCG+GGG | + | chr1_2:36355313-36355332 | Msa0069010:CDS | 45.0% | |
| TTTCGAATCTCCACCAAAGG+CGG | - | chr1_2:36355339-36355358 | None:intergenic | 45.0% | |
| TTTGGTGGAGATTCGAAAGG+CGG | + | chr1_2:36355341-36355360 | Msa0069010:CDS | 45.0% | |
| GTTCAGAAGTTGCAGAATGC+CGG | + | chr1_2:36355393-36355412 | Msa0069010:CDS | 45.0% | |
| !! | TAGGAAAGGCACTAGCTCTT+AGG | - | chr1_2:36355437-36355456 | None:intergenic | 45.0% |
| GCCTTTCCTAACATCAAGAG+TGG | + | chr1_2:36355447-36355466 | Msa0069010:CDS | 45.0% | |
| ACATCAAGAGTGGAAGGTTG+AGG | + | chr1_2:36355457-36355476 | Msa0069010:CDS | 45.0% | |
| ATGCTTCAGAAAAAGCCCTG+TGG | + | chr1_2:36355486-36355505 | Msa0069010:CDS | 45.0% | |
| ATGGAGGAGCTTCAGAATGA+AGG | + | chr1_2:36354308-36354327 | Msa0069010:CDS | 45.0% | |
| AATGAAGGTAACGTCGCTGA+CGG | + | chr1_2:36354323-36354342 | Msa0069010:CDS | 45.0% | |
| AAGCTGTGAACGATCCTGTT+CGG | + | chr1_2:36354438-36354457 | Msa0069010:CDS | 45.0% | |
| AATGACGACGGTCGTGATTA+GGG | - | chr1_2:36354520-36354539 | None:intergenic | 45.0% | |
| GTTCCTCTCAAACGAAGCAT+TGG | - | chr1_2:36354597-36354616 | None:intergenic | 45.0% | |
| GATCTTCTATCCGGTTCATC+GGG | - | chr1_2:36354683-36354702 | None:intergenic | 45.0% | |
| GATGAACCGGATAGAAGATC+TGG | + | chr1_2:36354683-36354702 | Msa0069010:CDS | 45.0% | |
| AACCGGATAGAAGATCTGGT+CGG | + | chr1_2:36354687-36354706 | Msa0069010:CDS | 45.0% | |
| !! | CAGCTTTTGTCTGGGATGAT+TGG | + | chr1_2:36354725-36354744 | Msa0069010:CDS | 45.0% |
| !! | TTTTGTCTGGGATGATTGGG+AGG | + | chr1_2:36354729-36354748 | Msa0069010:CDS | 45.0% |
| TGTTGAGGGATAAGACTCTG+TGG | + | chr1_2:36354900-36354919 | Msa0069010:CDS | 45.0% | |
| ! | CTCTGTGGCAGCTTAAGTTT+TGG | + | chr1_2:36354915-36354934 | Msa0069010:CDS | 45.0% |
| !! | GGTTTTGGTCTGTTTCTTGG+TGG | + | chr1_2:36355185-36355204 | Msa0069010:CDS | 45.0% |
| ! | CTGTTTCTTGGTGGGTACTT+TGG | + | chr1_2:36355194-36355213 | Msa0069010:CDS | 45.0% |
| !! | GTGGTTGGTGAAAACTCTAG+TGG | + | chr1_2:36355218-36355237 | Msa0069010:CDS | 45.0% |
| TTGTGATCGAAACACTCTCG+GGG | + | chr1_2:36355313-36355332 | Msa0069010:CDS | 45.0% | |
| TTTCGAATCTCCACCAAAGG+CGG | - | chr1_2:36355339-36355358 | None:intergenic | 45.0% | |
| TTTGGTGGAGATTCGAAAGG+CGG | + | chr1_2:36355341-36355360 | Msa0069010:CDS | 45.0% | |
| GTTCAGAAGTTGCAGAATGC+CGG | + | chr1_2:36355393-36355412 | Msa0069010:CDS | 45.0% | |
| !! | TAGGAAAGGCACTAGCTCTT+AGG | - | chr1_2:36355437-36355456 | None:intergenic | 45.0% |
| GCCTTTCCTAACATCAAGAG+TGG | + | chr1_2:36355447-36355466 | Msa0069010:CDS | 45.0% | |
| ACATCAAGAGTGGAAGGTTG+AGG | + | chr1_2:36355457-36355476 | Msa0069010:CDS | 45.0% | |
| ATGCTTCAGAAAAAGCCCTG+TGG | + | chr1_2:36355486-36355505 | Msa0069010:CDS | 45.0% | |
| GGACATGGATTTGGAGATGG+AGG | + | chr1_2:36354292-36354311 | Msa0069010:CDS | 50.0% | |
| AACTCGCGTTGAATCACCGT+GGG | - | chr1_2:36354374-36354393 | None:intergenic | 50.0% | |
| TTGCTGTGTCTTCTCCGAAC+AGG | - | chr1_2:36354455-36354474 | None:intergenic | 50.0% | |
| TGTTCGGAGAAGACACAGCA+AGG | + | chr1_2:36354454-36354473 | Msa0069010:CDS | 50.0% | |
| AGCAAGGATTCGCCGTCAAT+GGG | + | chr1_2:36354470-36354489 | Msa0069010:CDS | 50.0% | |
| CGAGCATACTCACCCATTGA+CGG | - | chr1_2:36354485-36354504 | None:intergenic | 50.0% | |
| CGTCAATGGGTGAGTATGCT+CGG | + | chr1_2:36354483-36354502 | Msa0069010:CDS | 50.0% | |
| ATGACGACGGTCGTGATTAG+GGG | - | chr1_2:36354519-36354538 | None:intergenic | 50.0% | |
| GAATGACGACGGTCGTGATT+AGG | - | chr1_2:36354521-36354540 | None:intergenic | 50.0% | |
| !! | CAGGTGATGGAGAATGACGA+CGG | - | chr1_2:36354532-36354551 | None:intergenic | 50.0% |
| TCGTCATTCTCCATCACCTG+CGG | + | chr1_2:36354532-36354551 | Msa0069010:CDS | 50.0% | |
| ! | GTGGTGATTGCGAGGTTTTG+AGG | + | chr1_2:36354564-36354583 | Msa0069010:CDS | 50.0% |
| !! | CCTCTCAAACGAAGCATTGG+AGG | - | chr1_2:36354594-36354613 | None:intergenic | 50.0% |
| CCTCCAATGCTTCGTTTGAG+AGG | + | chr1_2:36354591-36354610 | Msa0069010:CDS | 50.0% | |
| ATCGGGTGGGTCCATTAATC+TGG | - | chr1_2:36354666-36354685 | None:intergenic | 50.0% | |
| TTCTATCCGGTTCATCGGGT+GGG | - | chr1_2:36354679-36354698 | None:intergenic | 50.0% | |
| ACCGGATAGAAGATCTGGTC+GGG | + | chr1_2:36354688-36354707 | Msa0069010:CDS | 50.0% | |
| ACCCGACCAGATCTTCTATC+CGG | - | chr1_2:36354692-36354711 | None:intergenic | 50.0% | |
| ! | TCTGGGATGATTGGGAGGAA+AGG | + | chr1_2:36354734-36354753 | Msa0069010:CDS | 50.0% |
| ! | TCTTGGTGGGTACTTTGGTG+TGG | + | chr1_2:36355199-36355218 | Msa0069010:CDS | 50.0% |
| GCCTTTGGTGGAGATTCGAA+AGG | + | chr1_2:36355338-36355357 | Msa0069010:CDS | 50.0% | |
| GCCTTTCGAATCTCCACCAA+AGG | - | chr1_2:36355342-36355361 | None:intergenic | 50.0% | |
| !! | AGAGGAAAGGCTTGCTGATG+AGG | + | chr1_2:36355371-36355390 | Msa0069010:CDS | 50.0% |
| GTCAGCAGGTATGCTAACAC+CGG | - | chr1_2:36355415-36355434 | None:intergenic | 50.0% | |
| AAGAGTGGAAGGTTGAGGAG+TGG | + | chr1_2:36355462-36355481 | Msa0069010:CDS | 50.0% | |
| GGACATGGATTTGGAGATGG+AGG | + | chr1_2:36354292-36354311 | Msa0069010:CDS | 50.0% | |
| AACTCGCGTTGAATCACCGT+GGG | - | chr1_2:36354374-36354393 | None:intergenic | 50.0% | |
| TTGCTGTGTCTTCTCCGAAC+AGG | - | chr1_2:36354455-36354474 | None:intergenic | 50.0% | |
| TGTTCGGAGAAGACACAGCA+AGG | + | chr1_2:36354454-36354473 | Msa0069010:CDS | 50.0% | |
| AGCAAGGATTCGCCGTCAAT+GGG | + | chr1_2:36354470-36354489 | Msa0069010:CDS | 50.0% | |
| CGAGCATACTCACCCATTGA+CGG | - | chr1_2:36354485-36354504 | None:intergenic | 50.0% | |
| CGTCAATGGGTGAGTATGCT+CGG | + | chr1_2:36354483-36354502 | Msa0069010:CDS | 50.0% | |
| ATGACGACGGTCGTGATTAG+GGG | - | chr1_2:36354519-36354538 | None:intergenic | 50.0% | |
| GAATGACGACGGTCGTGATT+AGG | - | chr1_2:36354521-36354540 | None:intergenic | 50.0% | |
| !! | CAGGTGATGGAGAATGACGA+CGG | - | chr1_2:36354532-36354551 | None:intergenic | 50.0% |
| TCGTCATTCTCCATCACCTG+CGG | + | chr1_2:36354532-36354551 | Msa0069010:CDS | 50.0% | |
| ! | GTGGTGATTGCGAGGTTTTG+AGG | + | chr1_2:36354564-36354583 | Msa0069010:CDS | 50.0% |
| !! | CCTCTCAAACGAAGCATTGG+AGG | - | chr1_2:36354594-36354613 | None:intergenic | 50.0% |
| CCTCCAATGCTTCGTTTGAG+AGG | + | chr1_2:36354591-36354610 | Msa0069010:CDS | 50.0% | |
| ATCGGGTGGGTCCATTAATC+TGG | - | chr1_2:36354666-36354685 | None:intergenic | 50.0% | |
| TTCTATCCGGTTCATCGGGT+GGG | - | chr1_2:36354679-36354698 | None:intergenic | 50.0% | |
| ACCGGATAGAAGATCTGGTC+GGG | + | chr1_2:36354688-36354707 | Msa0069010:CDS | 50.0% | |
| ACCCGACCAGATCTTCTATC+CGG | - | chr1_2:36354692-36354711 | None:intergenic | 50.0% | |
| ! | TCTGGGATGATTGGGAGGAA+AGG | + | chr1_2:36354734-36354753 | Msa0069010:CDS | 50.0% |
| ! | TCTTGGTGGGTACTTTGGTG+TGG | + | chr1_2:36355199-36355218 | Msa0069010:CDS | 50.0% |
| GCCTTTGGTGGAGATTCGAA+AGG | + | chr1_2:36355338-36355357 | Msa0069010:CDS | 50.0% | |
| GCCTTTCGAATCTCCACCAA+AGG | - | chr1_2:36355342-36355361 | None:intergenic | 50.0% | |
| !! | AGAGGAAAGGCTTGCTGATG+AGG | + | chr1_2:36355371-36355390 | Msa0069010:CDS | 50.0% |
| GTCAGCAGGTATGCTAACAC+CGG | - | chr1_2:36355415-36355434 | None:intergenic | 50.0% | |
| AAGAGTGGAAGGTTGAGGAG+TGG | + | chr1_2:36355462-36355481 | Msa0069010:CDS | 50.0% | |
| CGCTGACGGAAAGTTAACGC+CGG | + | chr1_2:36354337-36354356 | Msa0069010:CDS | 55.0% | |
| TGACGGAAAGTTAACGCCGG+TGG | + | chr1_2:36354340-36354359 | Msa0069010:CDS | 55.0% | |
| CAACTCGCGTTGAATCACCG+TGG | - | chr1_2:36354375-36354394 | None:intergenic | 55.0% | |
| CAGCAAGGATTCGCCGTCAA+TGG | + | chr1_2:36354469-36354488 | Msa0069010:CDS | 55.0% | |
| TCGTGATTAGGGGGTTGTGG+AGG | - | chr1_2:36354509-36354528 | None:intergenic | 55.0% | |
| TGACGACGGTCGTGATTAGG+GGG | - | chr1_2:36354518-36354537 | None:intergenic | 55.0% | |
| CGTCATTCTCCATCACCTGC+GGG | + | chr1_2:36354533-36354552 | Msa0069010:CDS | 55.0% | |
| TCTCCATCACCTGCGGGTAA+CGG | + | chr1_2:36354539-36354558 | Msa0069010:CDS | 55.0% | |
| ! | TAACGGTGGTGGTGATTGCG+AGG | + | chr1_2:36354556-36354575 | Msa0069010:CDS | 55.0% |
| AATGGACCCACCCGATGAAC+CGG | + | chr1_2:36354670-36354689 | Msa0069010:CDS | 55.0% | |
| CTTCTATCCGGTTCATCGGG+TGG | - | chr1_2:36354680-36354699 | None:intergenic | 55.0% | |
| ! | GGTGGGTACTTTGGTGTGGT+TGG | + | chr1_2:36355203-36355222 | Msa0069010:CDS | 55.0% |
| GGAGATTCGAAAGGCGGAAG+AGG | + | chr1_2:36355347-36355366 | Msa0069010:CDS | 55.0% | |
| TCGAAAGGCGGAAGAGGAAG+AGG | + | chr1_2:36355353-36355372 | Msa0069010:CDS | 55.0% | |
| AGGCGGAAGAGGAAGAGGAA+AGG | + | chr1_2:36355358-36355377 | Msa0069010:CDS | 55.0% | |
| ! | GCACTAGCTCTTAGGTCAGC+AGG | - | chr1_2:36355429-36355448 | None:intergenic | 55.0% |
| CGCTGACGGAAAGTTAACGC+CGG | + | chr1_2:36354337-36354356 | Msa0069010:CDS | 55.0% | |
| TGACGGAAAGTTAACGCCGG+TGG | + | chr1_2:36354340-36354359 | Msa0069010:CDS | 55.0% | |
| CAACTCGCGTTGAATCACCG+TGG | - | chr1_2:36354375-36354394 | None:intergenic | 55.0% | |
| CAGCAAGGATTCGCCGTCAA+TGG | + | chr1_2:36354469-36354488 | Msa0069010:CDS | 55.0% | |
| TCGTGATTAGGGGGTTGTGG+AGG | - | chr1_2:36354509-36354528 | None:intergenic | 55.0% | |
| TGACGACGGTCGTGATTAGG+GGG | - | chr1_2:36354518-36354537 | None:intergenic | 55.0% | |
| CGTCATTCTCCATCACCTGC+GGG | + | chr1_2:36354533-36354552 | Msa0069010:CDS | 55.0% | |
| TCTCCATCACCTGCGGGTAA+CGG | + | chr1_2:36354539-36354558 | Msa0069010:CDS | 55.0% | |
| ! | TAACGGTGGTGGTGATTGCG+AGG | + | chr1_2:36354556-36354575 | Msa0069010:CDS | 55.0% |
| AATGGACCCACCCGATGAAC+CGG | + | chr1_2:36354670-36354689 | Msa0069010:CDS | 55.0% | |
| CTTCTATCCGGTTCATCGGG+TGG | - | chr1_2:36354680-36354699 | None:intergenic | 55.0% | |
| ! | GGTGGGTACTTTGGTGTGGT+TGG | + | chr1_2:36355203-36355222 | Msa0069010:CDS | 55.0% |
| GGAGATTCGAAAGGCGGAAG+AGG | + | chr1_2:36355347-36355366 | Msa0069010:CDS | 55.0% | |
| TCGAAAGGCGGAAGAGGAAG+AGG | + | chr1_2:36355353-36355372 | Msa0069010:CDS | 55.0% | |
| AGGCGGAAGAGGAAGAGGAA+AGG | + | chr1_2:36355358-36355377 | Msa0069010:CDS | 55.0% | |
| ! | GCACTAGCTCTTAGGTCAGC+AGG | - | chr1_2:36355429-36355448 | None:intergenic | 55.0% |
| CGGAAAGTTAACGCCGGTGG+AGG | + | chr1_2:36354343-36354362 | Msa0069010:CDS | 60.0% | |
| ACCGTGGGAGATTCCTCCAC+CGG | - | chr1_2:36354359-36354378 | None:intergenic | 60.0% | |
| CGGTCGTGATTAGGGGGTTG+TGG | - | chr1_2:36354512-36354531 | None:intergenic | 60.0% | |
| CGGAAAGTTAACGCCGGTGG+AGG | + | chr1_2:36354343-36354362 | Msa0069010:CDS | 60.0% | |
| ACCGTGGGAGATTCCTCCAC+CGG | - | chr1_2:36354359-36354378 | None:intergenic | 60.0% | |
| CGGTCGTGATTAGGGGGTTG+TGG | - | chr1_2:36354512-36354531 | None:intergenic | 60.0% | |
| GCCGGTGGAGGAATCTCCCA+CGG | + | chr1_2:36354355-36354374 | Msa0069010:CDS | 65.0% | |
| CCACCGTTACCCGCAGGTGA+TGG | - | chr1_2:36354545-36354564 | None:intergenic | 65.0% | |
| ! | CCATCACCTGCGGGTAACGG+TGG | + | chr1_2:36354542-36354561 | Msa0069010:CDS | 65.0% |
| ! | TCACCTGCGGGTAACGGTGG+TGG | + | chr1_2:36354545-36354564 | Msa0069010:CDS | 65.0% |
| TCACCACCACCGTTACCCGC+AGG | - | chr1_2:36354551-36354570 | None:intergenic | 65.0% | |
| AACACTCTCGGGGCCGCCTT+TGG | + | chr1_2:36355323-36355342 | Msa0069010:CDS | 65.0% | |
| GCCGGTGGAGGAATCTCCCA+CGG | + | chr1_2:36354355-36354374 | Msa0069010:CDS | 65.0% | |
| CCACCGTTACCCGCAGGTGA+TGG | - | chr1_2:36354545-36354564 | None:intergenic | 65.0% | |
| ! | CCATCACCTGCGGGTAACGG+TGG | + | chr1_2:36354542-36354561 | Msa0069010:CDS | 65.0% |
| ! | TCACCTGCGGGTAACGGTGG+TGG | + | chr1_2:36354545-36354564 | Msa0069010:CDS | 65.0% |
| TCACCACCACCGTTACCCGC+AGG | - | chr1_2:36354551-36354570 | None:intergenic | 65.0% | |
| AACACTCTCGGGGCCGCCTT+TGG | + | chr1_2:36355323-36355342 | Msa0069010:CDS | 65.0% | |
| ACTCTCGGGGCCGCCTTTGG+TGG | + | chr1_2:36355326-36355345 | Msa0069010:CDS | 70.0% | |
| ACTCTCGGGGCCGCCTTTGG+TGG | + | chr1_2:36355326-36355345 | Msa0069010:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 36354284 | 36355512 | 36354284 | ID=Msa0069010;Name=Msa0069010 |
| chr1_2 | mRNA | 36354284 | 36355512 | 36354284 | ID=Msa0069010-mRNA-1;Parent=Msa0069010;Name=Msa0069010-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|1|0.5|2|0|378 |
| chr1_2 | exon | 36354284 | 36355045 | 36354284 | ID=Msa0069010-mRNA-1:exon:11626;Parent=Msa0069010-mRNA-1 |
| chr1_2 | exon | 36355138 | 36355512 | 36355138 | ID=Msa0069010-mRNA-1:exon:11627;Parent=Msa0069010-mRNA-1 |
| chr1_2 | CDS | 36354284 | 36355045 | 36354284 | ID=Msa0069010-mRNA-1:cds;Parent=Msa0069010-mRNA-1 |
| chr1_2 | CDS | 36355138 | 36355512 | 36355138 | ID=Msa0069010-mRNA-1:cds;Parent=Msa0069010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
