AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183120 MtrunA17_Chr1g0211561 98.056 926 17 1 1 925 1 926 0.0 1878
Msa0183120 MtrunA17_Chr2g0300341 44.811 607 283 6 313 914 174 733 5.35e-178 533
Msa0183120 MtrunA17_Chr3g0136161 39.403 670 344 10 253 909 144 764 1.25e-162 494
Msa0183120 MtrunA17_Chr3g0136211 40.147 680 339 11 253 916 143 770 1.01e-159 487
Msa0183120 MtrunA17_Chr8g0369461 42.301 617 307 7 301 916 130 698 5.82e-155 472
Msa0183120 MtrunA17_Chr3g0136141 40.902 643 313 14 289 914 143 735 3.91e-151 464
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183120 AT1G78610.1 57.424 916 273 14 49 922 10 850 0.0 954
Msa0183120 AT2G17010.1 53.669 954 351 21 5 921 4 903 0.0 912
Msa0183120 AT1G53470.1 55.408 906 329 19 49 920 11 875 0.0 906
Msa0183120 AT3G14810.1 54.153 927 308 19 49 920 11 875 0.0 903
Msa0183120 AT3G14810.2 51.456 927 298 21 49 920 11 840 0.0 827
Msa0183120 AT2G17000.1 52.059 874 338 15 56 921 36 836 0.0 817
Msa0183120 AT2G17000.2 51.775 873 342 14 56 921 36 836 0.0 817
Msa0183120 AT2G17010.2 46.893 708 266 20 4 665 3 646 0.0 549
Msa0183120 AT5G12080.1 41.981 636 316 8 276 906 143 730 1.26e-170 514
Msa0183120 AT5G12080.2 41.981 636 316 8 276 906 143 730 1.26e-170 514
Msa0183120 AT5G12080.3 41.981 636 316 8 276 906 143 730 1.26e-170 514
Msa0183120 AT5G19520.1 38.916 609 321 6 302 908 181 740 6.39e-151 464
Msa0183120 AT5G19520.2 38.916 609 321 6 302 908 181 740 6.39e-151 464
Msa0183120 AT1G49260.1 28.926 121 81 3 373 491 5 122 3.03e-11 62.8

Find 254 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCCTTCAAATAGATTTA+TGG 0.106249 1_4:-71962974 None:intergenic
TTCCAAGCCGACACGTTATT+TGG 0.141191 1_4:-71961972 None:intergenic
CCCATTATCATCAGATTTCT+TGG 0.159517 1_4:-71961898 None:intergenic
CCATTATCATACTGGTTATT+TGG 0.196571 1_4:+71963656 Msa0183120:CDS
AGAAAACACATTTCAGTCTT+TGG 0.216359 1_4:+71961169 Msa0183120:CDS
TTCTCTCCAAATCTTGTTAT+TGG 0.218451 1_4:-71960482 None:intergenic
GGTTATTTGGCTCTTGATAT+TGG 0.220545 1_4:+71963669 Msa0183120:CDS
TTTGAAGGAGCGTCTGATTC+TGG 0.222745 1_4:+71962985 Msa0183120:CDS
GGAAAATCCTCTTCCATAAA+AGG 0.232230 1_4:-71961135 None:intergenic
TGGTTTCTGATTGGGTTATT+AGG 0.232570 1_4:+71961337 Msa0183120:CDS
CCTCTCGACATTAATGTTAG+AGG 0.238738 1_4:+71964465 Msa0183120:CDS
TAAAACTAAGTCCAGATTAA+TGG 0.259824 1_4:+71961011 Msa0183120:CDS
TCCAAGAAATCTGATGATAA+TGG 0.259886 1_4:+71961897 Msa0183120:CDS
CTCTGTGGCAGCTTAAGTTT+TGG 0.268313 1_4:+71961274 Msa0183120:CDS
AGAATTGAAAGGGTCTTTCT+AGG 0.285153 1_4:-71960085 None:intergenic
GTCTTTGGATTCTTCTTGAA+TGG 0.297980 1_4:+71961184 Msa0183120:CDS
GTCTTGGTTGCATTTATATT+CGG 0.298230 1_4:+71963736 Msa0183120:CDS
TTGTCCAGGTTAATGCCTTC+AGG 0.299126 1_4:+71963551 Msa0183120:intron
TCAATATGTGACCAAGGTTT+TGG 0.301334 1_4:+71961530 Msa0183120:CDS
TATGAAGAGGTTAATGAATA+TGG 0.306929 1_4:+71961995 Msa0183120:CDS
ATAGTTTGCATCACAGGGTT+AGG 0.308441 1_4:-71960280 None:intergenic
AACACTCTCGGGGCCGCCTT+TGG 0.329276 1_4:+71961683 Msa0183120:CDS
CTTAGTTGCCATTATCATAC+TGG 0.329463 1_4:+71963648 Msa0183120:CDS
AATGACGACGGTCGTGATTA+GGG 0.330012 1_4:-71960876 None:intergenic
GCAAATCCGCGTTGAAGAAC+TGG 0.330167 1_4:+71963016 Msa0183120:CDS
CCAAGAAATCTGATGATAAT+GGG 0.332159 1_4:+71961898 Msa0183120:CDS
CGCGGTCAAACTGTTATATA+TGG 0.333393 1_4:-71964819 None:intergenic
TTCACGTTTAACTAAACTTT+AGG 0.333542 1_4:+71960201 Msa0183120:five_prime_UTR
CCCAAGCCAATAACAAGATT+TGG 0.335913 1_4:+71960476 Msa0183120:CDS
TATGTCATTGGACATGGATT+TGG 0.336553 1_4:+71960642 Msa0183120:CDS
GAATGACGACGGTCGTGATT+AGG 0.339038 1_4:-71960877 None:intergenic
ATGTGAGTACATACTTTGAT+AGG 0.348611 1_4:+71961625 Msa0183120:CDS
TCCAAATCTTGTTATTGGCT+TGG 0.354363 1_4:-71960477 None:intergenic
CCAAATAACCAGTATGATAA+TGG 0.354637 1_4:-71963656 None:intergenic
GGTGAAAACTCTAGTGGTTA+AGG 0.355532 1_4:+71961584 Msa0183120:CDS
TTAGTAGCAAGGACACTGTT+AGG 0.356809 1_4:-71964022 None:intergenic
CCAAATCTTGTTATTGGCTT+GGG 0.357939 1_4:-71960476 None:intergenic
ACAATCACAAATTGAGTAGA+AGG 0.360639 1_4:+71964528 Msa0183120:exon
GGGATTGGGAATGGTGGTGG+TGG 0.363657 1_4:+71961918 Msa0183120:CDS
TGCAAAATTGTGTTTGGTTA+GGG 0.370280 1_4:+71961439 Msa0183120:CDS
TGTTCTAATATGTGGTAGAT+TGG 0.372968 1_4:+71961317 Msa0183120:CDS
AAAGAACCCTCTTTCTCAAT+AGG 0.374828 1_4:-71961389 None:intergenic
GTGCAAAATTGTGTTTGGTT+AGG 0.376067 1_4:+71961438 Msa0183120:CDS
AACCTTCCACTCTTGATGTT+AGG 0.378450 1_4:-71961813 None:intergenic
TTTATGTAAAGAGTTTCTTA+TGG 0.381078 1_4:+71964630 Msa0183120:three_prime_UTR
AAGTTTGTTCACTGCGGTTT+TGG 0.385413 1_4:-71963608 None:intergenic
CTGTTTCTTGGTGGGTACTT+TGG 0.387096 1_4:+71961554 Msa0183120:CDS
TTCACCGTTTATAGTCTTGA+AGG 0.388017 1_4:+71964290 Msa0183120:CDS
CAGCAAGGATTCGCCGTCAA+TGG 0.388996 1_4:+71960828 Msa0183120:CDS
CTGAGAAGCATAAGATTTGA+AGG 0.394553 1_4:-71960311 None:intergenic
GATCCACCGTCGCAACTAAT+CGG 0.395068 1_4:+71960586 Msa0183120:CDS
AAATCTGATGATAATGGGAT+TGG 0.402802 1_4:+71961903 Msa0183120:CDS
ATCGGGTGGGTCCATTAATC+TGG 0.405460 1_4:-71961022 None:intergenic
TGGTAGATTGGTTTCTGATT+GGG 0.406121 1_4:+71961329 Msa0183120:CDS
CCACTTTAACCATGTTCAAT+TGG 0.408862 1_4:-71964320 None:intergenic
TGTTGGCGGTCGTGGAGAAT+AGG 0.409760 1_4:-71960385 None:intergenic
GGCTGCTGTGTTGGCGGTCG+TGG 0.411125 1_4:-71960393 None:intergenic
GGTGGGTACTTTGGTGTGGT+TGG 0.411905 1_4:+71961563 Msa0183120:CDS
AAGAAAAGAAAGTAGGTATT+CGG 0.413917 1_4:-71960172 None:intergenic
ATAAATCAAAGAGTTTCTAT+TGG 0.418489 1_4:+71964701 Msa0183120:three_prime_UTR
CATCTATCTCCCACATCAAA+TGG 0.420933 1_4:-71963811 None:intergenic
GTGGTAGATTGGTTTCTGAT+TGG 0.422054 1_4:+71961328 Msa0183120:CDS
TTGAAGGAGCGTCTGATTCT+GGG 0.423129 1_4:+71962986 Msa0183120:CDS
GATCCTCTAGCTTAGCTTTG+TGG 0.429132 1_4:-71960567 None:intergenic
TTTGAGTGTTCCTTTGTTGA+GGG 0.432061 1_4:+71961245 Msa0183120:CDS
ACATGGGAGAAAGATATATC+AGG 0.439374 1_4:+71964376 Msa0183120:CDS
AATGGACCCACCCGATGAAC+CGG 0.440292 1_4:+71961029 Msa0183120:CDS
TAGGAAAGGCACTAGCTCTT+AGG 0.441340 1_4:-71961794 None:intergenic
ACTCTCGGGGCCGCCTTTGG+TGG 0.444265 1_4:+71961686 Msa0183120:CDS
TTGCTGTGTCTTCTCCGAAC+AGG 0.449131 1_4:-71960811 None:intergenic
TGTGAGCTCACAACTTGTCT+TGG 0.453149 1_4:+71963720 Msa0183120:CDS
TGATCCTTCAAGACTATAAA+CGG 0.453207 1_4:-71964294 None:intergenic
TAACAGTGTCCTTGCTACTA+AGG 0.454493 1_4:+71964024 Msa0183120:CDS
GATTAGCTTGATATCTACTA+AGG 0.455955 1_4:+71964664 Msa0183120:three_prime_UTR
TAGTTTGCATCACAGGGTTA+GGG 0.456148 1_4:-71960279 None:intergenic
GTTGGCGGTCGTGGAGAATA+GGG 0.456545 1_4:-71960384 None:intergenic
TGTCCAGGTTAATGCCTTCA+GGG 0.458204 1_4:+71963552 Msa0183120:intron
GGAATTTCCTATTGAGAAAG+AGG 0.459561 1_4:+71961382 Msa0183120:CDS
TCACAGGGTTAGGGTCTCTC+TGG 0.464016 1_4:-71960270 None:intergenic
AGCAAGGATTCGCCGTCAAT+GGG 0.468587 1_4:+71960829 Msa0183120:CDS
TAGAGAGTCGCGACTCGGTA+AGG 0.469846 1_4:-71964788 None:intergenic
AGATCTTCTATCCGGTTCAT+CGG 0.470858 1_4:-71961040 None:intergenic
CTTTGAGTGTTCCTTTGTTG+AGG 0.472992 1_4:+71961244 Msa0183120:CDS
AAAACCATAAATCTATTTGA+AGG 0.473072 1_4:+71962970 Msa0183120:CDS
ATAAAACGCATTAAGTCCTC+AGG 0.474659 1_4:-71962928 None:intergenic
AAGCTGTGCAAAATTGTGTT+TGG 0.475551 1_4:+71961433 Msa0183120:CDS
TTCTATCCGGTTCATCGGGT+GGG 0.475815 1_4:-71961035 None:intergenic
CTTCATAAACAGCGTGCCTC+CGG 0.476167 1_4:+71960616 Msa0183120:CDS
CGAGTTGAAAGTTAGTTTCG+AGG 0.476779 1_4:+71960747 Msa0183120:CDS
TATATCTTTCTCCCATGTCT+TGG 0.481099 1_4:-71964371 None:intergenic
ACATGGTTAAAGTGGCGATC+TGG 0.481594 1_4:+71964328 Msa0183120:CDS
TTTCAGGTGGGGTAGCTACA+TGG 0.484332 1_4:-71964102 None:intergenic
ATTATCGTATCTCAGAAATA+CGG 0.486565 1_4:-71963984 None:intergenic
TCAATAGAATCTCCCATGTC+AGG 0.487717 1_4:-71964070 None:intergenic
TCACCTGCGGGTAACGGTGG+TGG 0.488405 1_4:+71960904 Msa0183120:CDS
CGGAAAGTTAACGCCGGTGG+AGG 0.491627 1_4:+71960702 Msa0183120:CDS
TAATGAATATGGTTCGGCAT+GGG 0.492101 1_4:+71962006 Msa0183120:CDS
TCATCAGATTTCTTGGAAAG+TGG 0.493438 1_4:-71961891 None:intergenic
CGTCAATGGGTGAGTATGCT+CGG 0.493782 1_4:+71960842 Msa0183120:CDS
ATGTTGCTAGGCGCGGCTGC+AGG 0.494616 1_4:+71962141 Msa0183120:CDS
ATCCCATTCGAATTTGAAGC+TGG 0.495504 1_4:-71960772 None:intergenic
AATGGGATTGGGAATGGTGG+TGG 0.496908 1_4:+71961915 Msa0183120:CDS
GAAAAGAGCGGCTGCTGTGT+TGG 0.498772 1_4:-71960402 None:intergenic
CTGATCGTCTTCCAGCTAGT+TGG 0.498824 1_4:+71964502 Msa0183120:CDS
TCGAAAGGCGGAAGAGGAAG+AGG 0.498977 1_4:+71961713 Msa0183120:CDS
AGAGGAAAGGCTTGCTGATG+AGG 0.500044 1_4:+71961731 Msa0183120:CDS
GGAGAATAGGGAGCTGTTCG+TGG 0.500526 1_4:-71960372 None:intergenic
GATGAACCGGATAGAAGATC+TGG 0.501788 1_4:+71961042 Msa0183120:CDS
GATCTTCTATCCGGTTCATC+GGG 0.503203 1_4:-71961039 None:intergenic
TGGAAGTTCATTCTATGAGT+TGG 0.503678 1_4:-71964351 None:intergenic
GGAGATTCGAAAGGCGGAAG+AGG 0.504692 1_4:+71961707 Msa0183120:CDS
CGGTGATATGTCATTGGACA+TGG 0.505087 1_4:+71960636 Msa0183120:CDS
AATCTGATGATAATGGGATT+GGG 0.505675 1_4:+71961904 Msa0183120:CDS
CCTCCAATGCTTCGTTTGAG+AGG 0.506341 1_4:+71960950 Msa0183120:CDS
GCACTAGCTCTTAGGTCAGC+AGG 0.507575 1_4:-71961786 None:intergenic
ATCCAAATAACGTGTCGGCT+TGG 0.507985 1_4:+71961970 Msa0183120:CDS
AACCAGCTTCAAATTCGAAT+GGG 0.508508 1_4:+71960770 Msa0183120:CDS
AAGCTGTGAACGATCCTGTT+CGG 0.508743 1_4:+71960797 Msa0183120:CDS
CCTCTCAAACGAAGCATTGG+AGG 0.508854 1_4:-71960950 None:intergenic
AGGTTAATGCCTTCAGGGAG+AGG 0.510601 1_4:+71963557 Msa0183120:intron
GTTTGTGATCGAAACACTCT+CGG 0.513851 1_4:+71961671 Msa0183120:CDS
TGCCTCCGGTGATATGTCAT+TGG 0.514202 1_4:+71960630 Msa0183120:CDS
GTGATTGTTGTCCAACTAGC+TGG 0.516994 1_4:-71964513 None:intergenic
CTTCTATCCGGTTCATCGGG+TGG 0.521257 1_4:-71961036 None:intergenic
GTCGCGACTCGGTAAGGTGT+TGG 0.521513 1_4:-71964782 None:intergenic
GATGATAATGGGATTGGGAA+TGG 0.521877 1_4:+71961909 Msa0183120:CDS
TAGTAGCAAGGACACTGTTA+GGG 0.522100 1_4:-71964021 None:intergenic
CCACCGTTACCCGCAGGTGA+TGG 0.523525 1_4:-71960901 None:intergenic
ATGACAATGGTTGATGAAGA+AGG 0.527001 1_4:-71959988 None:intergenic
AAGAGCGGCTGCTGTGTTGG+CGG 0.527336 1_4:-71960399 None:intergenic
CCAATTGAACATGGTTAAAG+TGG 0.527768 1_4:+71964320 Msa0183120:CDS
ACATGAGGCTACTAAGTACA+TGG 0.527915 1_4:-71964560 None:intergenic
AAAAGAAAAGAAAAGAAAGT+AGG 0.528103 1_4:-71960179 None:intergenic
GTTCCTCTCAAACGAAGCAT+TGG 0.529720 1_4:-71960953 None:intergenic
AGAGGTTAATGAATATGGTT+CGG 0.532380 1_4:+71962000 Msa0183120:CDS
GCATGGGGCACTTACTACAT+TGG 0.533191 1_4:+71962022 Msa0183120:CDS
ACCCGACCAGATCTTCTATC+CGG 0.536055 1_4:-71961048 None:intergenic
TCTCCATCACCTGCGGGTAA+CGG 0.536446 1_4:+71960898 Msa0183120:CDS
GTTCAGAAGTTGCAGAATGC+CGG 0.537436 1_4:+71961753 Msa0183120:CDS
TGACAATGGTTGATGAAGAA+GGG 0.538861 1_4:-71959987 None:intergenic
TTTCCGATTAGTTGCGACGG+TGG 0.542126 1_4:-71960589 None:intergenic
ATGGAGGAGCTTCAGAATGA+AGG 0.543397 1_4:+71960667 Msa0183120:CDS
ATCTTGTTATTGGCTTGGGA+AGG 0.545695 1_4:-71960472 None:intergenic
AACTTGCCACTCTTAACCAC+AGG 0.546689 1_4:-71961861 None:intergenic
ACCGGATAGAAGATCTGGTC+GGG 0.546747 1_4:+71961047 Msa0183120:CDS
GTCTTTCTAGGACGATGTGA+GGG 0.547082 1_4:-71960073 None:intergenic
ATGATTCTTGTTCTAATATG+TGG 0.547822 1_4:+71961309 Msa0183120:CDS
GGACATGGATTTGGAGATGG+AGG 0.548013 1_4:+71960651 Msa0183120:CDS
TCGGTAAGGTGTTGGATAAG+AGG 0.548420 1_4:-71964774 None:intergenic
ACGACGACGTCTCCGGCCAT+AGG 0.549204 1_4:-71960424 None:intergenic
ACTACGGTAGAAATTATGTA+TGG 0.549810 1_4:-71964047 None:intergenic
CGTCATTCTCCATCACCTGC+GGG 0.550193 1_4:+71960892 Msa0183120:CDS
ACAAATCAGAAGTGAAAATG+AGG 0.550446 1_4:+71962088 Msa0183120:CDS
ACATCAAGAGTGGAAGGTTG+AGG 0.551793 1_4:+71961817 Msa0183120:CDS
AACTCGCGTTGAATCACCGT+GGG 0.553700 1_4:-71960730 None:intergenic
TTTGTGATCGAAACACTCTC+GGG 0.554279 1_4:+71961672 Msa0183120:CDS
GCCTTTCGAATCTCCACCAA+AGG 0.555304 1_4:-71961699 None:intergenic
TCTGGGATGATTGGGAGGAA+AGG 0.558110 1_4:+71961093 Msa0183120:CDS
ATGACGACGGTCGTGATTAG+GGG 0.560581 1_4:-71960875 None:intergenic
AAGTGCTCTCCTCTCCCTGA+AGG 0.560903 1_4:-71963566 None:intergenic
AATGAAGGTAACGTCGCTGA+CGG 0.565304 1_4:+71960682 Msa0183120:CDS
GAACCAGCTTCAAATTCGAA+TGG 0.566244 1_4:+71960769 Msa0183120:CDS
CAAATCCGCGTTGAAGAACT+GGG 0.566844 1_4:+71963017 Msa0183120:CDS
CAGTTTCATTGATAACAAGA+AGG 0.567068 1_4:+71964254 Msa0183120:intron
ACCGTGGGAGATTCCTCCAC+CGG 0.568309 1_4:-71960715 None:intergenic
TTCCTAACATCAAGAGTGGA+AGG 0.569646 1_4:+71961811 Msa0183120:CDS
GGATTGGGAATGGTGGTGGT+GGG 0.572317 1_4:+71961919 Msa0183120:CDS
TTGATAACAAGAAGGAGCAC+TGG 0.574489 1_4:+71964262 Msa0183120:CDS
TAGAATGAACTTCCAAGACA+TGG 0.577011 1_4:+71964359 Msa0183120:CDS
ATTGGACATGGATTTGGAGA+TGG 0.578623 1_4:+71960648 Msa0183120:CDS
AATGAATATGGTTCGGCATG+GGG 0.578953 1_4:+71962007 Msa0183120:CDS
GCCTTTCCTAACATCAAGAG+TGG 0.581351 1_4:+71961807 Msa0183120:CDS
TATGTATGGCCTTAGTAGCA+AGG 0.582004 1_4:-71964033 None:intergenic
GCCTTTGGTGGAGATTCGAA+AGG 0.585486 1_4:+71961698 Msa0183120:CDS
TTCAAGACTATAAACGGTGA+AGG 0.586497 1_4:-71964288 None:intergenic
AAATCTTTCAGAATGTTGCT+AGG 0.587382 1_4:+71962129 Msa0183120:CDS
TCCACTCTTGATGTTAGGAA+AGG 0.591698 1_4:-71961808 None:intergenic
AATAGGGAGCTGTTCGTGGT+CGG 0.592308 1_4:-71960368 None:intergenic
TCACCACCACCGTTACCCGC+AGG 0.592576 1_4:-71960907 None:intergenic
ATGTGAAATTGATGCGACCC+AGG 0.595144 1_4:+71963831 Msa0183120:CDS
CAAGAAACAGACCAAAACCT+TGG 0.596695 1_4:-71961541 None:intergenic
TCTTGGTGGGTACTTTGGTG+TGG 0.598050 1_4:+71961559 Msa0183120:CDS
TGACGACGGTCGTGATTAGG+GGG 0.598378 1_4:-71960874 None:intergenic
GACAATGGTTGATGAAGAAG+GGG 0.598617 1_4:-71959986 None:intergenic
AAATCTAGAGAGTCGCGACT+CGG 0.599039 1_4:-71964793 None:intergenic
TAACGGTGGTGGTGATTGCG+AGG 0.599664 1_4:+71960915 Msa0183120:CDS
AAACCTTGGTCACATATTGA+AGG 0.599670 1_4:-71961527 None:intergenic
TGTAATGCATCCATTTGATG+TGG 0.600406 1_4:+71963801 Msa0183120:CDS
TTTCTACCGTAGTCCTGACA+TGG 0.601376 1_4:+71964057 Msa0183120:CDS
GATAATGGGATTGGGAATGG+TGG 0.603168 1_4:+71961912 Msa0183120:CDS
TTTCGAATCTCCACCAAAGG+CGG 0.604367 1_4:-71961696 None:intergenic
GGTCTTTCTAGGACGATGTG+AGG 0.605622 1_4:-71960074 None:intergenic
GAATTTCCTATTGAGAAAGA+GGG 0.608181 1_4:+71961383 Msa0183120:CDS
TTAATGAATATGGTTCGGCA+TGG 0.609094 1_4:+71962005 Msa0183120:CDS
AAAAGCCCTGTGGTTAAGAG+TGG 0.609737 1_4:+71961855 Msa0183120:CDS
TTTCAGAATGTTGCTAGGCG+CGG 0.611025 1_4:+71962134 Msa0183120:CDS
CCATCACCTGCGGGTAACGG+TGG 0.611209 1_4:+71960901 Msa0183120:CDS
AATCTCCCATGTCAGGACTA+CGG 0.611921 1_4:-71964063 None:intergenic
CGAGCATACTCACCCATTGA+CGG 0.614333 1_4:-71960841 None:intergenic
AGCTGGAAGACGATCAGAAG+TGG 0.616809 1_4:-71964496 None:intergenic
CTCATCACGAACATTGTCGC+CGG 0.617480 1_4:-71960530 None:intergenic
CATGTCCAATGACATATCAC+CGG 0.618141 1_4:-71960635 None:intergenic
AGGCGGAAGAGGAAGAGGAA+AGG 0.622102 1_4:+71961718 Msa0183120:CDS
TCGTCATTCTCCATCACCTG+CGG 0.624845 1_4:+71960891 Msa0183120:CDS
GGAAGACGATCAGAAGTGGT+AGG 0.626699 1_4:-71964492 None:intergenic
CCTCTAGCTTAGCTTTGTGG+CGG 0.631480 1_4:-71960564 None:intergenic
GTAATGCATCCATTTGATGT+GGG 0.631740 1_4:+71963802 Msa0183120:CDS
TGTCGGCTTGGAATATGAAG+AGG 0.635410 1_4:+71961982 Msa0183120:CDS
AAAAGAAAGTAGGTATTCGG+TGG 0.635993 1_4:-71960169 None:intergenic
CATGAGGCTACTAAGTACAT+GGG 0.637736 1_4:-71964559 None:intergenic
CAATCACAAATTGAGTAGAA+GGG 0.641112 1_4:+71964529 Msa0183120:exon
TTGCAGAGAGAGAGTTGTGG+TGG 0.641201 1_4:-71959932 None:intergenic
CCTCTAACATTAATGTCGAG+AGG 0.642710 1_4:-71964465 None:intergenic
AGAATGAACTTCCAAGACAT+GGG 0.642846 1_4:+71964360 Msa0183120:CDS
GTCAGCAGGTATGCTAACAC+CGG 0.644403 1_4:-71961772 None:intergenic
CTTAGTAGCCTCATGTTGCG+TGG 0.644679 1_4:+71964567 Msa0183120:three_prime_UTR
ACATAATGCCACGCAACATG+AGG 0.644692 1_4:-71964575 None:intergenic
AACCGGATAGAAGATCTGGT+CGG 0.644852 1_4:+71961046 Msa0183120:CDS
TTTGGTGGAGATTCGAAAGG+CGG 0.649479 1_4:+71961701 Msa0183120:CDS
AAGAGTGGAAGGTTGAGGAG+TGG 0.649657 1_4:+71961822 Msa0183120:CDS
CCTGCTAAAATGTAACACTT+CGG 0.652616 1_4:-71964601 None:intergenic
TGTCCTTCAATATGTGACCA+AGG 0.652704 1_4:+71961524 Msa0183120:CDS
GCCGGTGGAGGAATCTCCCA+CGG 0.653244 1_4:+71960714 Msa0183120:CDS
TGACGGAAAGTTAACGCCGG+TGG 0.654507 1_4:+71960699 Msa0183120:CDS
TGTTCGGAGAAGACACAGCA+AGG 0.654791 1_4:+71960813 Msa0183120:CDS
CCGCCACAAAGCTAAGCTAG+AGG 0.656696 1_4:+71960564 Msa0183120:CDS
GTGAAAATCAACGACGACGG+CGG 0.662140 1_4:+71960445 Msa0183120:CDS
GCTGAATCCAAATAACGTGT+CGG 0.662469 1_4:+71961965 Msa0183120:CDS
TTCTACCGTAGTCCTGACAT+GGG 0.663692 1_4:+71964058 Msa0183120:CDS
TAATGTCGAGAGGCATGAGA+CGG 0.670724 1_4:-71964455 None:intergenic
TCTTTCTAGGACGATGTGAG+GGG 0.678504 1_4:-71960072 None:intergenic
GTGGTTGGTGAAAACTCTAG+TGG 0.683918 1_4:+71961578 Msa0183120:CDS
GGATCACGACCAATTGAACA+TGG 0.685709 1_4:+71964311 Msa0183120:CDS
ATCGTATCTCAGAAATACGG+TGG 0.688391 1_4:-71963981 None:intergenic
TAAAACGCATTAAGTCCTCA+GGG 0.688495 1_4:-71962927 None:intergenic
GTCCAATGACATATCACCGG+AGG 0.689612 1_4:-71960632 None:intergenic
TCGATGAAGTTTGTTCACTG+CGG 0.690334 1_4:-71963614 None:intergenic
TGGGAGAAAGATATATCAGG+AGG 0.691880 1_4:+71964379 Msa0183120:CDS
CGCTGACGGAAAGTTAACGC+CGG 0.693881 1_4:+71960696 Msa0183120:CDS
ACTTGCCACTCTTAACCACA+GGG 0.694699 1_4:-71961860 None:intergenic
GGATTGCAGAGAGAGAGTTG+TGG 0.697383 1_4:-71959935 None:intergenic
CTCCGGCCATAGGAAAAGAG+CGG 0.698377 1_4:-71960414 None:intergenic
TTGTGATCGAAACACTCTCG+GGG 0.699008 1_4:+71961673 Msa0183120:CDS
AACGATAATGATGATGACAA+TGG 0.699365 1_4:-71960001 None:intergenic
AGAGTCTTATCCCTCAACAA+AGG 0.699553 1_4:-71961255 None:intergenic
TGTTGAGGGATAAGACTCTG+TGG 0.700670 1_4:+71961259 Msa0183120:CDS
ATGAGGCTACTAAGTACATG+GGG 0.703671 1_4:-71964558 None:intergenic
GTCGTGAAAATCAACGACGA+CGG 0.711455 1_4:+71960442 Msa0183120:CDS
CAACTCGCGTTGAATCACCG+TGG 0.722386 1_4:-71960731 None:intergenic
CAGGTGATGGAGAATGACGA+CGG 0.731799 1_4:-71960888 None:intergenic
CTGCAGGTTTATATACCCTG+AGG 0.739699 1_4:+71962912 Msa0183120:intron
ATCCGCGTTGAAGAACTGGG+TGG 0.755991 1_4:+71963020 Msa0183120:CDS
TACCACCCAGTTCTTCAACG+CGG 0.756191 1_4:-71963022 None:intergenic
AATGCTTCAGAAAAGCCCTG+TGG 0.795880 1_4:+71961845 Msa0183120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTTTTAGAATTGAAA+GGG - chr1_4:71960098-71960117 None:intergenic 15.0%
!!! TTTGATTTTTTAGAATTGAA+AGG - chr1_4:71960099-71960118 None:intergenic 15.0%
!!! TTGAGTTTGATTTTAATTAT+TGG + chr1_4:71961207-71961226 Msa0183120:CDS 15.0%
!! AAAATTCAAAAGACATAATT+AGG + chr1_4:71962352-71962371 Msa0183120:intron 15.0%
!! GTGTATATAGAAAAATTTCT+TGG + chr1_4:71960143-71960162 Msa0183120:five_prime_UTR 20.0%
!! AAAAGAAAAGAAAAGAAAGT+AGG - chr1_4:71960182-71960201 None:intergenic 20.0%
!! TATGTCATATAAATCATGAT+TGG - chr1_4:71962192-71962211 None:intergenic 20.0%
!! AAAAATAAACCAAATAGAAG+GGG - chr1_4:71962385-71962404 None:intergenic 20.0%
!! GAAAAATAAACCAAATAGAA+GGG - chr1_4:71962386-71962405 None:intergenic 20.0%
!! TGAAAAATAAACCAAATAGA+AGG - chr1_4:71962387-71962406 None:intergenic 20.0%
!! AAAACCATAAATCTATTTGA+AGG + chr1_4:71962970-71962989 Msa0183120:CDS 20.0%
!! TTTATGTAAAGAGTTTCTTA+TGG + chr1_4:71964630-71964649 Msa0183120:three_prime_UTR 20.0%
!! ATAAATCAAAGAGTTTCTAT+TGG + chr1_4:71964701-71964720 Msa0183120:three_prime_UTR 20.0%
! AAGAAAAGAAAGTAGGTATT+CGG - chr1_4:71960175-71960194 None:intergenic 25.0%
! TTCACGTTTAACTAAACTTT+AGG + chr1_4:71960201-71960220 Msa0183120:five_prime_UTR 25.0%
!!! TTTTAATAGTTTGCATCACA+GGG - chr1_4:71960288-71960307 None:intergenic 25.0%
!!! TTTTTAATAGTTTGCATCAC+AGG - chr1_4:71960289-71960308 None:intergenic 25.0%
! TAAAACTAAGTCCAGATTAA+TGG + chr1_4:71961011-71961030 Msa0183120:CDS 25.0%
! ATGATTCTTGTTCTAATATG+TGG + chr1_4:71961309-71961328 Msa0183120:CDS 25.0%
! TATGAAGAGGTTAATGAATA+TGG + chr1_4:71961995-71962014 Msa0183120:CDS 25.0%
! TAATACCAAGAGAAAGAAAT+AGG - chr1_4:71962318-71962337 None:intergenic 25.0%
! CTAATGGTTTCTCTAATATT+AGG - chr1_4:71962729-71962748 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr1_4:71962740-71962759 Msa0183120:intron 25.0%
! TTATTACTTATCCCACTAAT+CGG - chr1_4:71962825-71962844 None:intergenic 25.0%
! GATAAGTAATAAATGACAAG+TGG + chr1_4:71962833-71962852 Msa0183120:intron 25.0%
! GAGAAAGGATTAATAAACAA+TGG - chr1_4:71962860-71962879 None:intergenic 25.0%
! AAATAAAATGACAGAGAGAA+AGG - chr1_4:71962875-71962894 None:intergenic 25.0%
! AGGAAACATATGAAATTACA+CGG - chr1_4:71963073-71963092 None:intergenic 25.0%
! AAACGATACTAAAGAAGAAA+AGG - chr1_4:71963093-71963112 None:intergenic 25.0%
! TAATACTCCTATACTACTAT+GGG - chr1_4:71963290-71963309 None:intergenic 25.0%
! AAACAAAATCAAAAGTAACC+AGG - chr1_4:71963460-71963479 None:intergenic 25.0%
!! TATTGTTCATTTTATTGTCC+AGG + chr1_4:71963537-71963556 Msa0183120:intron 25.0%
! TAGAGATATAAACATTACCT+GGG - chr1_4:71963851-71963870 None:intergenic 25.0%
! ATTATCGTATCTCAGAAATA+CGG - chr1_4:71963987-71964006 None:intergenic 25.0%
! CAAATATGCAAAGATAATGA+AGG - chr1_4:71964187-71964206 None:intergenic 25.0%
! CATTATCTTTGCATATTTGT+TGG + chr1_4:71964188-71964207 Msa0183120:intron 25.0%
!! TTGTAGTCAATAACGATTTT+AGG - chr1_4:71964232-71964251 None:intergenic 25.0%
! AACGATAATGATGATGACAA+TGG - chr1_4:71960004-71960023 None:intergenic 30.0%
! TTCTCTCCAAATCTTGTTAT+TGG - chr1_4:71960485-71960504 None:intergenic 30.0%
! TGATGAAGATGATCCTTTTA+TGG + chr1_4:71961122-71961141 Msa0183120:CDS 30.0%
! TGTGTTTTCTTATACTCATC+TGG - chr1_4:71961159-71961178 None:intergenic 30.0%
AGAAAACACATTTCAGTCTT+TGG + chr1_4:71961169-71961188 Msa0183120:CDS 30.0%
TGTTCTAATATGTGGTAGAT+TGG + chr1_4:71961317-71961336 Msa0183120:CDS 30.0%
! TTGCTGTGTTTTGTATTGAA+AGG + chr1_4:71961361-71961380 Msa0183120:CDS 30.0%
GAATTTCCTATTGAGAAAGA+GGG + chr1_4:71961383-71961402 Msa0183120:CDS 30.0%
!!! AGGGTTCTTTATTTTGTGTA+TGG + chr1_4:71961402-71961421 Msa0183120:CDS 30.0%
!!! TTTATTTTGTGTATGGTGTC+AGG + chr1_4:71961409-71961428 Msa0183120:CDS 30.0%
TGCAAAATTGTGTTTGGTTA+GGG + chr1_4:71961439-71961458 Msa0183120:CDS 30.0%
ATGTGAGTACATACTTTGAT+AGG + chr1_4:71961625-71961644 Msa0183120:CDS 30.0%
TCCAAGAAATCTGATGATAA+TGG + chr1_4:71961897-71961916 Msa0183120:CDS 30.0%
CCAAGAAATCTGATGATAAT+GGG + chr1_4:71961898-71961917 Msa0183120:CDS 30.0%
!! AAATCTGATGATAATGGGAT+TGG + chr1_4:71961903-71961922 Msa0183120:CDS 30.0%
!! AATCTGATGATAATGGGATT+GGG + chr1_4:71961904-71961923 Msa0183120:CDS 30.0%
AGAGGTTAATGAATATGGTT+CGG + chr1_4:71962000-71962019 Msa0183120:CDS 30.0%
!! ATTTTCACTTCTGATTTGTG+TGG - chr1_4:71962087-71962106 None:intergenic 30.0%
ACAAATCAGAAGTGAAAATG+AGG + chr1_4:71962088-71962107 Msa0183120:CDS 30.0%
AAATCTTTCAGAATGTTGCT+AGG + chr1_4:71962129-71962148 Msa0183120:CDS 30.0%
AGTATACAGTCTTAAATGTC+AGG - chr1_4:71962235-71962254 None:intergenic 30.0%
! TAACTCCTATTTCTTTCTCT+TGG + chr1_4:71962310-71962329 Msa0183120:intron 30.0%
CTTTCTCTTGGTATTATGTA+TGG + chr1_4:71962322-71962341 Msa0183120:intron 30.0%
TAGTGTGACCAATAAAGAAA+AGG + chr1_4:71962572-71962591 Msa0183120:intron 30.0%
! GACAGAAACCTTTTCTTTAT+TGG - chr1_4:71962583-71962602 None:intergenic 30.0%
TGCATGTAATAAATGACAAG+TGG + chr1_4:71962618-71962637 Msa0183120:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr1_4:71962745-71962764 None:intergenic 30.0%
TGTTCTATCAAAGACCATAT+TGG - chr1_4:71962780-71962799 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr1_4:71962783-71962802 Msa0183120:intron 30.0%
! TCTGATGGAATATCTTTTAG+AGG + chr1_4:71963114-71963133 Msa0183120:intron 30.0%
! TGTGCATCACATTTTCATTA+TGG + chr1_4:71963161-71963180 Msa0183120:intron 30.0%
AGATAAACCCATAGTAGTAT+AGG + chr1_4:71963280-71963299 Msa0183120:intron 30.0%
GTAATACTCCTATACTACTA+TGG - chr1_4:71963291-71963310 None:intergenic 30.0%
TAGTTGCATCAGATTAAACT+TGG + chr1_4:71963339-71963358 Msa0183120:intron 30.0%
CCAAATAACCAGTATGATAA+TGG - chr1_4:71963659-71963678 None:intergenic 30.0%
! CCATTATCATACTGGTTATT+TGG + chr1_4:71963656-71963675 Msa0183120:CDS 30.0%
GCTCACAAAAAGAAGAAATT+TGG - chr1_4:71963707-71963726 None:intergenic 30.0%
GTCTTGGTTGCATTTATATT+CGG + chr1_4:71963736-71963755 Msa0183120:CDS 30.0%
CTAGAGATATAAACATTACC+TGG - chr1_4:71963852-71963871 None:intergenic 30.0%
CAGGTAATGTTTATATCTCT+AGG + chr1_4:71963850-71963869 Msa0183120:intron 30.0%
AAATCACAAGCAAAAATGAG+GGG - chr1_4:71963930-71963949 None:intergenic 30.0%
GAAATCACAAGCAAAAATGA+GGG - chr1_4:71963931-71963950 None:intergenic 30.0%
TGAAATCACAAGCAAAAATG+AGG - chr1_4:71963932-71963951 None:intergenic 30.0%
! TTTTTGCTTGTGATTTCAGA+TGG + chr1_4:71963934-71963953 Msa0183120:intron 30.0%
ACTACGGTAGAAATTATGTA+TGG - chr1_4:71964050-71964069 None:intergenic 30.0%
! TTCATGAGTGAAATCTTTTC+AGG - chr1_4:71964121-71964140 None:intergenic 30.0%
! CAGTTTCATTGATAACAAGA+AGG + chr1_4:71964254-71964273 Msa0183120:intron 30.0%
TGATCCTTCAAGACTATAAA+CGG - chr1_4:71964297-71964316 None:intergenic 30.0%
!!! AAGAGTTGATGAAGATTTTC+AGG + chr1_4:71964415-71964434 Msa0183120:CDS 30.0%
!!! AGAGTTGATGAAGATTTTCA+GGG + chr1_4:71964416-71964435 Msa0183120:CDS 30.0%
ACAATCACAAATTGAGTAGA+AGG + chr1_4:71964528-71964547 Msa0183120:exon 30.0%
CAATCACAAATTGAGTAGAA+GGG + chr1_4:71964529-71964548 Msa0183120:exon 30.0%
!! GATTAGCTTGATATCTACTA+AGG + chr1_4:71964664-71964683 Msa0183120:three_prime_UTR 30.0%
!! TGACAATGGTTGATGAAGAA+GGG - chr1_4:71959990-71960009 None:intergenic 35.0%
!! ATGACAATGGTTGATGAAGA+AGG - chr1_4:71959991-71960010 None:intergenic 35.0%
AGAATTGAAAGGGTCTTTCT+AGG - chr1_4:71960088-71960107 None:intergenic 35.0%
AAAAGAAAGTAGGTATTCGG+TGG - chr1_4:71960172-71960191 None:intergenic 35.0%
! CTGAGAAGCATAAGATTTGA+AGG - chr1_4:71960314-71960333 None:intergenic 35.0%
!! CCAAATCTTGTTATTGGCTT+GGG - chr1_4:71960479-71960498 None:intergenic 35.0%
!! TCCAAATCTTGTTATTGGCT+TGG - chr1_4:71960480-71960499 None:intergenic 35.0%
!!! TACGATTTTTGGAATGACAC+CGG + chr1_4:71960511-71960530 Msa0183120:CDS 35.0%
!! AATTTTCCGATTAGTTGCGA+CGG - chr1_4:71960595-71960614 None:intergenic 35.0%
TATGTCATTGGACATGGATT+TGG + chr1_4:71960642-71960661 Msa0183120:CDS 35.0%
AACCAGCTTCAAATTCGAAT+GGG + chr1_4:71960770-71960789 Msa0183120:CDS 35.0%
! TTGATTTTCTCTGCATTGAG+AGG - chr1_4:71960978-71960997 None:intergenic 35.0%
! AGATGATCCTTTTATGGAAG+AGG + chr1_4:71961128-71961147 Msa0183120:CDS 35.0%
GGAAAATCCTCTTCCATAAA+AGG - chr1_4:71961138-71961157 None:intergenic 35.0%
GTCTTTGGATTCTTCTTGAA+TGG + chr1_4:71961184-71961203 Msa0183120:CDS 35.0%
TTTGAGTGTTCCTTTGTTGA+GGG + chr1_4:71961245-71961264 Msa0183120:CDS 35.0%
!!! GCAGCTTAAGTTTTGGAAAT+GGG + chr1_4:71961281-71961300 Msa0183120:CDS 35.0%
!! TGGTAGATTGGTTTCTGATT+GGG + chr1_4:71961329-71961348 Msa0183120:CDS 35.0%
TGGTTTCTGATTGGGTTATT+AGG + chr1_4:71961337-71961356 Msa0183120:CDS 35.0%
GGAATTTCCTATTGAGAAAG+AGG + chr1_4:71961382-71961401 Msa0183120:CDS 35.0%
AAAGAACCCTCTTTCTCAAT+AGG - chr1_4:71961392-71961411 None:intergenic 35.0%
AAGCTGTGCAAAATTGTGTT+TGG + chr1_4:71961433-71961452 Msa0183120:CDS 35.0%
GTGCAAAATTGTGTTTGGTT+AGG + chr1_4:71961438-71961457 Msa0183120:CDS 35.0%
AAACCTTGGTCACATATTGA+AGG - chr1_4:71961530-71961549 None:intergenic 35.0%
! TCAATATGTGACCAAGGTTT+TGG + chr1_4:71961530-71961549 Msa0183120:CDS 35.0%
TCATCAGATTTCTTGGAAAG+TGG - chr1_4:71961894-71961913 None:intergenic 35.0%
CCCATTATCATCAGATTTCT+TGG - chr1_4:71961901-71961920 None:intergenic 35.0%
! TTAATGAATATGGTTCGGCA+TGG + chr1_4:71962005-71962024 Msa0183120:CDS 35.0%
! TAATGAATATGGTTCGGCAT+GGG + chr1_4:71962006-71962025 Msa0183120:CDS 35.0%
GGTGAGTAAGACTAGATTAA+TGG - chr1_4:71962171-71962190 None:intergenic 35.0%
ACAGTCTTAAATGTCAGGTA+TGG - chr1_4:71962230-71962249 None:intergenic 35.0%
AAACATGACCAAATCACCTT+AGG + chr1_4:71962443-71962462 Msa0183120:intron 35.0%
AAAACTTGCCTAAGGTGATT+TGG - chr1_4:71962454-71962473 None:intergenic 35.0%
! AGAGCATTAAAACTTGCCTA+AGG - chr1_4:71962462-71962481 None:intergenic 35.0%
CTCAATTGATTGTGTCACAT+AGG - chr1_4:71962548-71962567 None:intergenic 35.0%
GTGGTAGAAAAGTTCTTAGA+TGG + chr1_4:71962637-71962656 Msa0183120:intron 35.0%
TGATCTACTCTTCTTACCAT+AGG - chr1_4:71962680-71962699 None:intergenic 35.0%
AGAAGAGTAGATCAAATGTC+AGG + chr1_4:71962686-71962705 Msa0183120:intron 35.0%
TAGATCAAATGTCAGGTTAG+AGG + chr1_4:71962693-71962712 Msa0183120:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr1_4:71962752-71962771 Msa0183120:intron 35.0%
! TCAATGAGTTGGATCCAATA+TGG + chr1_4:71962763-71962782 Msa0183120:intron 35.0%
TAAAACGCATTAAGTCCTCA+GGG - chr1_4:71962930-71962949 None:intergenic 35.0%
ATAAAACGCATTAAGTCCTC+AGG - chr1_4:71962931-71962950 None:intergenic 35.0%
CGCTCCTTCAAATAGATTTA+TGG - chr1_4:71962977-71962996 None:intergenic 35.0%
CTTTAGTATCGTTTGTCTGA+TGG + chr1_4:71963099-71963118 Msa0183120:intron 35.0%
TGAAAATGTGATGCACATCA+AGG - chr1_4:71963158-71963177 None:intergenic 35.0%
TACAACAAGTGAATAACGTC+AGG - chr1_4:71963190-71963209 None:intergenic 35.0%
!! AATCTGATGCAACTAGTCTT+AGG - chr1_4:71963334-71963353 None:intergenic 35.0%
CTTAGTTGCCATTATCATAC+TGG + chr1_4:71963648-71963667 Msa0183120:CDS 35.0%
!! GGTTATTTGGCTCTTGATAT+TGG + chr1_4:71963669-71963688 Msa0183120:CDS 35.0%
TGTAATGCATCCATTTGATG+TGG + chr1_4:71963801-71963820 Msa0183120:CDS 35.0%
GTAATGCATCCATTTGATGT+GGG + chr1_4:71963802-71963821 Msa0183120:CDS 35.0%
!!! TGAGTGAAATCTTTTCAGGT+GGG - chr1_4:71964117-71964136 None:intergenic 35.0%
!! ATGAGTGAAATCTTTTCAGG+TGG - chr1_4:71964118-71964137 None:intergenic 35.0%
TTCAAGACTATAAACGGTGA+AGG - chr1_4:71964291-71964310 None:intergenic 35.0%
! TTCACCGTTTATAGTCTTGA+AGG + chr1_4:71964290-71964309 Msa0183120:CDS 35.0%
CCACTTTAACCATGTTCAAT+TGG - chr1_4:71964323-71964342 None:intergenic 35.0%
CCAATTGAACATGGTTAAAG+TGG + chr1_4:71964320-71964339 Msa0183120:CDS 35.0%
TGGAAGTTCATTCTATGAGT+TGG - chr1_4:71964354-71964373 None:intergenic 35.0%
TAGAATGAACTTCCAAGACA+TGG + chr1_4:71964359-71964378 Msa0183120:CDS 35.0%
AGAATGAACTTCCAAGACAT+GGG + chr1_4:71964360-71964379 Msa0183120:CDS 35.0%
TATATCTTTCTCCCATGTCT+TGG - chr1_4:71964374-71964393 None:intergenic 35.0%
ACATGGGAGAAAGATATATC+AGG + chr1_4:71964376-71964395 Msa0183120:CDS 35.0%
CCTGCTAAAATGTAACACTT+CGG - chr1_4:71964604-71964623 None:intergenic 35.0%
!! CGAAGTGTTACATTTTAGCA+GGG + chr1_4:71964602-71964621 Msa0183120:three_prime_UTR 35.0%
!! GACAATGGTTGATGAAGAAG+GGG - chr1_4:71959989-71960008 None:intergenic 40.0%
! TAGTTTGCATCACAGGGTTA+GGG - chr1_4:71960282-71960301 None:intergenic 40.0%
! ATAGTTTGCATCACAGGGTT+AGG - chr1_4:71960283-71960302 None:intergenic 40.0%
!! ATCTTGTTATTGGCTTGGGA+AGG - chr1_4:71960475-71960494 None:intergenic 40.0%
CCCAAGCCAATAACAAGATT+TGG + chr1_4:71960476-71960495 Msa0183120:CDS 40.0%
! GAGAATCCAGCTACGATTTT+TGG + chr1_4:71960500-71960519 Msa0183120:CDS 40.0%
GTCATTCCAAAAATCGTAGC+TGG - chr1_4:71960509-71960528 None:intergenic 40.0%
CATGTCCAATGACATATCAC+CGG - chr1_4:71960638-71960657 None:intergenic 40.0%
ATTGGACATGGATTTGGAGA+TGG + chr1_4:71960648-71960667 Msa0183120:CDS 40.0%
! CGAGTTGAAAGTTAGTTTCG+AGG + chr1_4:71960747-71960766 Msa0183120:CDS 40.0%
GAACCAGCTTCAAATTCGAA+TGG + chr1_4:71960769-71960788 Msa0183120:CDS 40.0%
! ATCCCATTCGAATTTGAAGC+TGG - chr1_4:71960775-71960794 None:intergenic 40.0%
AGATCTTCTATCCGGTTCAT+CGG - chr1_4:71961043-71961062 None:intergenic 40.0%
! AAATCGAGTCAGCTTTTGTC+TGG + chr1_4:71961075-71961094 Msa0183120:CDS 40.0%
! AATCGAGTCAGCTTTTGTCT+GGG + chr1_4:71961076-71961095 Msa0183120:CDS 40.0%
!! AGCTTTTGTCTGGGATGATT+GGG + chr1_4:71961085-71961104 Msa0183120:CDS 40.0%
CTTTGAGTGTTCCTTTGTTG+AGG + chr1_4:71961244-71961263 Msa0183120:CDS 40.0%
! AGAGTCTTATCCCTCAACAA+AGG - chr1_4:71961258-71961277 None:intergenic 40.0%
!!! GGCAGCTTAAGTTTTGGAAA+TGG + chr1_4:71961280-71961299 Msa0183120:CDS 40.0%
!! GTGGTAGATTGGTTTCTGAT+TGG + chr1_4:71961328-71961347 Msa0183120:CDS 40.0%
!!! TAGGGCTTGTTTTGATTGCA+TGG + chr1_4:71961457-71961476 Msa0183120:CDS 40.0%
TGTCCTTCAATATGTGACCA+AGG + chr1_4:71961524-71961543 Msa0183120:CDS 40.0%
CAAGAAACAGACCAAAACCT+TGG - chr1_4:71961544-71961563 None:intergenic 40.0%
!! CAAGGTTTTGGTCTGTTTCT+TGG + chr1_4:71961542-71961561 Msa0183120:CDS 40.0%
!! GTTTTGGTCTGTTTCTTGGT+GGG + chr1_4:71961546-71961565 Msa0183120:CDS 40.0%
GGTGAAAACTCTAGTGGTTA+AGG + chr1_4:71961584-71961603 Msa0183120:CDS 40.0%
GTTTGTGATCGAAACACTCT+CGG + chr1_4:71961671-71961690 Msa0183120:CDS 40.0%
TTTGTGATCGAAACACTCTC+GGG + chr1_4:71961672-71961691 Msa0183120:CDS 40.0%
TCCACTCTTGATGTTAGGAA+AGG - chr1_4:71961811-71961830 None:intergenic 40.0%
TTCCTAACATCAAGAGTGGA+AGG + chr1_4:71961811-71961830 Msa0183120:CDS 40.0%
AACCTTCCACTCTTGATGTT+AGG - chr1_4:71961816-71961835 None:intergenic 40.0%
!! GATGATAATGGGATTGGGAA+TGG + chr1_4:71961909-71961928 Msa0183120:CDS 40.0%
GCTGAATCCAAATAACGTGT+CGG + chr1_4:71961965-71961984 Msa0183120:CDS 40.0%
! AATGAATATGGTTCGGCATG+GGG + chr1_4:71962007-71962026 Msa0183120:CDS 40.0%
AGATGGTTCATGTAGAGAGA+AGG + chr1_4:71962654-71962673 Msa0183120:intron 40.0%
AAATGTCAGGTTAGAGGTAG+AGG + chr1_4:71962699-71962718 Msa0183120:intron 40.0%
!! AAGTTTGTTCACTGCGGTTT+TGG - chr1_4:71963611-71963630 None:intergenic 40.0%
! TCGATGAAGTTTGTTCACTG+CGG - chr1_4:71963617-71963636 None:intergenic 40.0%
CATCTATCTCCCACATCAAA+TGG - chr1_4:71963814-71963833 None:intergenic 40.0%
ATCGTATCTCAGAAATACGG+TGG - chr1_4:71963984-71964003 None:intergenic 40.0%
TAGTAGCAAGGACACTGTTA+GGG - chr1_4:71964024-71964043 None:intergenic 40.0%
TTAGTAGCAAGGACACTGTT+AGG - chr1_4:71964025-71964044 None:intergenic 40.0%
TAACAGTGTCCTTGCTACTA+AGG + chr1_4:71964024-71964043 Msa0183120:CDS 40.0%
! TATGTATGGCCTTAGTAGCA+AGG - chr1_4:71964036-71964055 None:intergenic 40.0%
TCAATAGAATCTCCCATGTC+AGG - chr1_4:71964073-71964092 None:intergenic 40.0%
!!! GAGTGAAATCTTTTCAGGTG+GGG - chr1_4:71964116-71964135 None:intergenic 40.0%
! TTGATAACAAGAAGGAGCAC+TGG + chr1_4:71964262-71964281 Msa0183120:CDS 40.0%
TGGGAGAAAGATATATCAGG+AGG + chr1_4:71964379-71964398 Msa0183120:CDS 40.0%
CCTCTAACATTAATGTCGAG+AGG - chr1_4:71964468-71964487 None:intergenic 40.0%
CCTCTCGACATTAATGTTAG+AGG + chr1_4:71964465-71964484 Msa0183120:CDS 40.0%
ATGAGGCTACTAAGTACATG+GGG - chr1_4:71964561-71964580 None:intergenic 40.0%
CATGAGGCTACTAAGTACAT+GGG - chr1_4:71964562-71964581 None:intergenic 40.0%
ACATGAGGCTACTAAGTACA+TGG - chr1_4:71964563-71964582 None:intergenic 40.0%
!! CCGAAGTGTTACATTTTAGC+AGG + chr1_4:71964601-71964620 Msa0183120:three_prime_UTR 40.0%
!! GTGTTACATTTTAGCAGGGT+AGG + chr1_4:71964606-71964625 Msa0183120:three_prime_UTR 40.0%
CGCGGTCAAACTGTTATATA+TGG - chr1_4:71964822-71964841 None:intergenic 40.0%
!! TCTTTCTAGGACGATGTGAG+GGG - chr1_4:71960075-71960094 None:intergenic 45.0%
!! GTCTTTCTAGGACGATGTGA+GGG - chr1_4:71960076-71960095 None:intergenic 45.0%
GTCGTGAAAATCAACGACGA+CGG + chr1_4:71960442-71960461 Msa0183120:CDS 45.0%
!! GATCCTCTAGCTTAGCTTTG+TGG - chr1_4:71960570-71960589 None:intergenic 45.0%
CGGTGATATGTCATTGGACA+TGG + chr1_4:71960636-71960655 Msa0183120:CDS 45.0%
ATGGAGGAGCTTCAGAATGA+AGG + chr1_4:71960667-71960686 Msa0183120:CDS 45.0%
AATGAAGGTAACGTCGCTGA+CGG + chr1_4:71960682-71960701 Msa0183120:CDS 45.0%
AAGCTGTGAACGATCCTGTT+CGG + chr1_4:71960797-71960816 Msa0183120:CDS 45.0%
AATGACGACGGTCGTGATTA+GGG - chr1_4:71960879-71960898 None:intergenic 45.0%
GTTCCTCTCAAACGAAGCAT+TGG - chr1_4:71960956-71960975 None:intergenic 45.0%
GATCTTCTATCCGGTTCATC+GGG - chr1_4:71961042-71961061 None:intergenic 45.0%
GATGAACCGGATAGAAGATC+TGG + chr1_4:71961042-71961061 Msa0183120:CDS 45.0%
AACCGGATAGAAGATCTGGT+CGG + chr1_4:71961046-71961065 Msa0183120:CDS 45.0%
!! CAGCTTTTGTCTGGGATGAT+TGG + chr1_4:71961084-71961103 Msa0183120:CDS 45.0%
!! TTTTGTCTGGGATGATTGGG+AGG + chr1_4:71961088-71961107 Msa0183120:CDS 45.0%
TGTTGAGGGATAAGACTCTG+TGG + chr1_4:71961259-71961278 Msa0183120:CDS 45.0%
! CTCTGTGGCAGCTTAAGTTT+TGG + chr1_4:71961274-71961293 Msa0183120:CDS 45.0%
!! GGTTTTGGTCTGTTTCTTGG+TGG + chr1_4:71961545-71961564 Msa0183120:CDS 45.0%
! CTGTTTCTTGGTGGGTACTT+TGG + chr1_4:71961554-71961573 Msa0183120:CDS 45.0%
!! GTGGTTGGTGAAAACTCTAG+TGG + chr1_4:71961578-71961597 Msa0183120:CDS 45.0%
TTGTGATCGAAACACTCTCG+GGG + chr1_4:71961673-71961692 Msa0183120:CDS 45.0%
TTTCGAATCTCCACCAAAGG+CGG - chr1_4:71961699-71961718 None:intergenic 45.0%
TTTGGTGGAGATTCGAAAGG+CGG + chr1_4:71961701-71961720 Msa0183120:CDS 45.0%
GTTCAGAAGTTGCAGAATGC+CGG + chr1_4:71961753-71961772 Msa0183120:CDS 45.0%
!! TAGGAAAGGCACTAGCTCTT+AGG - chr1_4:71961797-71961816 None:intergenic 45.0%
GCCTTTCCTAACATCAAGAG+TGG + chr1_4:71961807-71961826 Msa0183120:CDS 45.0%
ACATCAAGAGTGGAAGGTTG+AGG + chr1_4:71961817-71961836 Msa0183120:CDS 45.0%
AATGCTTCAGAAAAGCCCTG+TGG + chr1_4:71961845-71961864 Msa0183120:CDS 45.0%
AAAAGCCCTGTGGTTAAGAG+TGG + chr1_4:71961855-71961874 Msa0183120:CDS 45.0%
ACTTGCCACTCTTAACCACA+GGG - chr1_4:71961863-71961882 None:intergenic 45.0%
AACTTGCCACTCTTAACCAC+AGG - chr1_4:71961864-71961883 None:intergenic 45.0%
!! GATAATGGGATTGGGAATGG+TGG + chr1_4:71961912-71961931 Msa0183120:CDS 45.0%
!! ATCCAAATAACGTGTCGGCT+TGG + chr1_4:71961970-71961989 Msa0183120:CDS 45.0%
TTCCAAGCCGACACGTTATT+TGG - chr1_4:71961975-71961994 None:intergenic 45.0%
!! TGTCGGCTTGGAATATGAAG+AGG + chr1_4:71961982-71962001 Msa0183120:CDS 45.0%
TTTCAGAATGTTGCTAGGCG+CGG + chr1_4:71962134-71962153 Msa0183120:CDS 45.0%
GGATGTCTTCCCCTTCTATT+TGG + chr1_4:71962373-71962392 Msa0183120:intron 45.0%
TCATGTAGAGAGAAGGCCTA+TGG + chr1_4:71962661-71962680 Msa0183120:intron 45.0%
TGATCCATGTAGCCGATTAG+TGG + chr1_4:71962810-71962829 Msa0183120:intron 45.0%
GATCCATGTAGCCGATTAGT+GGG + chr1_4:71962811-71962830 Msa0183120:intron 45.0%
TATCCCACTAATCGGCTACA+TGG - chr1_4:71962817-71962836 None:intergenic 45.0%
AAACCTGCAGTGCAGCAAAA+AGG - chr1_4:71962902-71962921 None:intergenic 45.0%
CTGCAGGTTTATATACCCTG+AGG + chr1_4:71962912-71962931 Msa0183120:intron 45.0%
! GCGTTTTATGCGAGAAGATG+AGG + chr1_4:71962942-71962961 Msa0183120:CDS 45.0%
!! TTTGAAGGAGCGTCTGATTC+TGG + chr1_4:71962985-71963004 Msa0183120:CDS 45.0%
!! TTGAAGGAGCGTCTGATTCT+GGG + chr1_4:71962986-71963005 Msa0183120:CDS 45.0%
CAAATCCGCGTTGAAGAACT+GGG + chr1_4:71963017-71963036 Msa0183120:CDS 45.0%
ACACACACACACACACACTA+CGG - chr1_4:71963225-71963244 None:intergenic 45.0%
!! GATGCAACTAGTCTTAGGCA+GGG - chr1_4:71963329-71963348 None:intergenic 45.0%
!! TGATGCAACTAGTCTTAGGC+AGG - chr1_4:71963330-71963349 None:intergenic 45.0%
! ATCAAGAGTGTATTCGTGCC+TGG + chr1_4:71963439-71963458 Msa0183120:intron 45.0%
TTGTCCAGGTTAATGCCTTC+AGG + chr1_4:71963551-71963570 Msa0183120:intron 45.0%
TGTCCAGGTTAATGCCTTCA+GGG + chr1_4:71963552-71963571 Msa0183120:intron 45.0%
TGTGAGCTCACAACTTGTCT+TGG + chr1_4:71963720-71963739 Msa0183120:CDS 45.0%
ATGTGAAATTGATGCGACCC+AGG + chr1_4:71963831-71963850 Msa0183120:CDS 45.0%
ACAAGCAAAAATGAGGGGAG+GGG - chr1_4:71963925-71963944 None:intergenic 45.0%
CACAAGCAAAAATGAGGGGA+GGG - chr1_4:71963926-71963945 None:intergenic 45.0%
TCACAAGCAAAAATGAGGGG+AGG - chr1_4:71963927-71963946 None:intergenic 45.0%
TTTCTACCGTAGTCCTGACA+TGG + chr1_4:71964057-71964076 Msa0183120:CDS 45.0%
TTCTACCGTAGTCCTGACAT+GGG + chr1_4:71964058-71964077 Msa0183120:CDS 45.0%
AATCTCCCATGTCAGGACTA+CGG - chr1_4:71964066-71964085 None:intergenic 45.0%
GGATCACGACCAATTGAACA+TGG + chr1_4:71964311-71964330 Msa0183120:CDS 45.0%
ACATGGTTAAAGTGGCGATC+TGG + chr1_4:71964328-71964347 Msa0183120:CDS 45.0%
! TAATGTCGAGAGGCATGAGA+CGG - chr1_4:71964458-71964477 None:intergenic 45.0%
GTGATTGTTGTCCAACTAGC+TGG - chr1_4:71964516-71964535 None:intergenic 45.0%
ACATAATGCCACGCAACATG+AGG - chr1_4:71964578-71964597 None:intergenic 45.0%
!! TCGGTAAGGTGTTGGATAAG+AGG - chr1_4:71964777-71964796 None:intergenic 45.0%
AAATCTAGAGAGTCGCGACT+CGG - chr1_4:71964796-71964815 None:intergenic 45.0%
!!! TAATGTTTTTAAATAATTTA+TGG - chr1_4:71959959-71959978 None:intergenic 5.0%
TTGCAGAGAGAGAGTTGTGG+TGG - chr1_4:71959935-71959954 None:intergenic 50.0%
GGATTGCAGAGAGAGAGTTG+TGG - chr1_4:71959938-71959957 None:intergenic 50.0%
!! GGTCTTTCTAGGACGATGTG+AGG - chr1_4:71960077-71960096 None:intergenic 50.0%
AATAGGGAGCTGTTCGTGGT+CGG - chr1_4:71960371-71960390 None:intergenic 50.0%
! GATTTTCACGACGACGTCTC+CGG - chr1_4:71960434-71960453 None:intergenic 50.0%
GTGAAAATCAACGACGACGG+CGG + chr1_4:71960445-71960464 Msa0183120:CDS 50.0%
CTCATCACGAACATTGTCGC+CGG - chr1_4:71960533-71960552 None:intergenic 50.0%
!! CCTCTAGCTTAGCTTTGTGG+CGG - chr1_4:71960567-71960586 None:intergenic 50.0%
GATCCACCGTCGCAACTAAT+CGG + chr1_4:71960586-71960605 Msa0183120:CDS 50.0%
! TTTCCGATTAGTTGCGACGG+TGG - chr1_4:71960592-71960611 None:intergenic 50.0%
CTTCATAAACAGCGTGCCTC+CGG + chr1_4:71960616-71960635 Msa0183120:CDS 50.0%
TGCCTCCGGTGATATGTCAT+TGG + chr1_4:71960630-71960649 Msa0183120:CDS 50.0%
GTCCAATGACATATCACCGG+AGG - chr1_4:71960635-71960654 None:intergenic 50.0%
GGACATGGATTTGGAGATGG+AGG + chr1_4:71960651-71960670 Msa0183120:CDS 50.0%
AACTCGCGTTGAATCACCGT+GGG - chr1_4:71960733-71960752 None:intergenic 50.0%
TTGCTGTGTCTTCTCCGAAC+AGG - chr1_4:71960814-71960833 None:intergenic 50.0%
TGTTCGGAGAAGACACAGCA+AGG + chr1_4:71960813-71960832 Msa0183120:CDS 50.0%
AGCAAGGATTCGCCGTCAAT+GGG + chr1_4:71960829-71960848 Msa0183120:CDS 50.0%
CGAGCATACTCACCCATTGA+CGG - chr1_4:71960844-71960863 None:intergenic 50.0%
CGTCAATGGGTGAGTATGCT+CGG + chr1_4:71960842-71960861 Msa0183120:CDS 50.0%
ATGACGACGGTCGTGATTAG+GGG - chr1_4:71960878-71960897 None:intergenic 50.0%
GAATGACGACGGTCGTGATT+AGG - chr1_4:71960880-71960899 None:intergenic 50.0%
!! CAGGTGATGGAGAATGACGA+CGG - chr1_4:71960891-71960910 None:intergenic 50.0%
TCGTCATTCTCCATCACCTG+CGG + chr1_4:71960891-71960910 Msa0183120:CDS 50.0%
! GTGGTGATTGCGAGGTTTTG+AGG + chr1_4:71960923-71960942 Msa0183120:CDS 50.0%
!! CCTCTCAAACGAAGCATTGG+AGG - chr1_4:71960953-71960972 None:intergenic 50.0%
CCTCCAATGCTTCGTTTGAG+AGG + chr1_4:71960950-71960969 Msa0183120:CDS 50.0%
ATCGGGTGGGTCCATTAATC+TGG - chr1_4:71961025-71961044 None:intergenic 50.0%
TTCTATCCGGTTCATCGGGT+GGG - chr1_4:71961038-71961057 None:intergenic 50.0%
ACCGGATAGAAGATCTGGTC+GGG + chr1_4:71961047-71961066 Msa0183120:CDS 50.0%
ACCCGACCAGATCTTCTATC+CGG - chr1_4:71961051-71961070 None:intergenic 50.0%
! TCTGGGATGATTGGGAGGAA+AGG + chr1_4:71961093-71961112 Msa0183120:CDS 50.0%
! TCTTGGTGGGTACTTTGGTG+TGG + chr1_4:71961559-71961578 Msa0183120:CDS 50.0%
GCCTTTGGTGGAGATTCGAA+AGG + chr1_4:71961698-71961717 Msa0183120:CDS 50.0%
GCCTTTCGAATCTCCACCAA+AGG - chr1_4:71961702-71961721 None:intergenic 50.0%
!! AGAGGAAAGGCTTGCTGATG+AGG + chr1_4:71961731-71961750 Msa0183120:CDS 50.0%
GTCAGCAGGTATGCTAACAC+CGG - chr1_4:71961775-71961794 None:intergenic 50.0%
AAGAGTGGAAGGTTGAGGAG+TGG + chr1_4:71961822-71961841 Msa0183120:CDS 50.0%
AATGGGATTGGGAATGGTGG+TGG + chr1_4:71961915-71961934 Msa0183120:CDS 50.0%
! GCATGGGGCACTTACTACAT+TGG + chr1_4:71962022-71962041 Msa0183120:CDS 50.0%
! CTTCCTTTTTGCTGCACTGC+AGG + chr1_4:71962896-71962915 Msa0183120:intron 50.0%
GCAAATCCGCGTTGAAGAAC+TGG + chr1_4:71963016-71963035 Msa0183120:CDS 50.0%
TACCACCCAGTTCTTCAACG+CGG - chr1_4:71963025-71963044 None:intergenic 50.0%
!! TCTCCCTGAAGGCATTAACC+TGG - chr1_4:71963558-71963577 None:intergenic 50.0%
AGGTTAATGCCTTCAGGGAG+AGG + chr1_4:71963557-71963576 Msa0183120:intron 50.0%
GTCTTCTTGCAGTGCAAACC+TGG + chr1_4:71963887-71963906 Msa0183120:intron 50.0%
GAGGGGGACAAAATTAGACC+AGG - chr1_4:71963908-71963927 None:intergenic 50.0%
CAAGCAAAAATGAGGGGAGG+GGG - chr1_4:71963924-71963943 None:intergenic 50.0%
! TTTCAGGTGGGGTAGCTACA+TGG - chr1_4:71964105-71964124 None:intergenic 50.0%
GGAAGACGATCAGAAGTGGT+AGG - chr1_4:71964495-71964514 None:intergenic 50.0%
AGCTGGAAGACGATCAGAAG+TGG - chr1_4:71964499-71964518 None:intergenic 50.0%
CTGATCGTCTTCCAGCTAGT+TGG + chr1_4:71964502-71964521 Msa0183120:CDS 50.0%
CTTAGTAGCCTCATGTTGCG+TGG + chr1_4:71964567-71964586 Msa0183120:three_prime_UTR 50.0%
TCACAGGGTTAGGGTCTCTC+TGG - chr1_4:71960273-71960292 None:intergenic 55.0%
GGAGAATAGGGAGCTGTTCG+TGG - chr1_4:71960375-71960394 None:intergenic 55.0%
GTTGGCGGTCGTGGAGAATA+GGG - chr1_4:71960387-71960406 None:intergenic 55.0%
TGTTGGCGGTCGTGGAGAAT+AGG - chr1_4:71960388-71960407 None:intergenic 55.0%
GAAAAGAGCGGCTGCTGTGT+TGG - chr1_4:71960405-71960424 None:intergenic 55.0%
! CAGCAGCCGCTCTTTTCCTA+TGG + chr1_4:71960408-71960427 Msa0183120:CDS 55.0%
! AGCCGCTCTTTTCCTATGGC+CGG + chr1_4:71960412-71960431 Msa0183120:CDS 55.0%
CTCCGGCCATAGGAAAAGAG+CGG - chr1_4:71960417-71960436 None:intergenic 55.0%
CCGCCACAAAGCTAAGCTAG+AGG + chr1_4:71960564-71960583 Msa0183120:CDS 55.0%
CGCTGACGGAAAGTTAACGC+CGG + chr1_4:71960696-71960715 Msa0183120:CDS 55.0%
TGACGGAAAGTTAACGCCGG+TGG + chr1_4:71960699-71960718 Msa0183120:CDS 55.0%
CAACTCGCGTTGAATCACCG+TGG - chr1_4:71960734-71960753 None:intergenic 55.0%
CAGCAAGGATTCGCCGTCAA+TGG + chr1_4:71960828-71960847 Msa0183120:CDS 55.0%
TCGTGATTAGGGGGTTGTGG+AGG - chr1_4:71960868-71960887 None:intergenic 55.0%
TGACGACGGTCGTGATTAGG+GGG - chr1_4:71960877-71960896 None:intergenic 55.0%
CGTCATTCTCCATCACCTGC+GGG + chr1_4:71960892-71960911 Msa0183120:CDS 55.0%
TCTCCATCACCTGCGGGTAA+CGG + chr1_4:71960898-71960917 Msa0183120:CDS 55.0%
! TAACGGTGGTGGTGATTGCG+AGG + chr1_4:71960915-71960934 Msa0183120:CDS 55.0%
AATGGACCCACCCGATGAAC+CGG + chr1_4:71961029-71961048 Msa0183120:CDS 55.0%
CTTCTATCCGGTTCATCGGG+TGG - chr1_4:71961039-71961058 None:intergenic 55.0%
! GGTGGGTACTTTGGTGTGGT+TGG + chr1_4:71961563-71961582 Msa0183120:CDS 55.0%
GGAGATTCGAAAGGCGGAAG+AGG + chr1_4:71961707-71961726 Msa0183120:CDS 55.0%
TCGAAAGGCGGAAGAGGAAG+AGG + chr1_4:71961713-71961732 Msa0183120:CDS 55.0%
AGGCGGAAGAGGAAGAGGAA+AGG + chr1_4:71961718-71961737 Msa0183120:CDS 55.0%
! GCACTAGCTCTTAGGTCAGC+AGG - chr1_4:71961789-71961808 None:intergenic 55.0%
!! GGATTGGGAATGGTGGTGGT+GGG + chr1_4:71961919-71961938 Msa0183120:CDS 55.0%
ATCCGCGTTGAAGAACTGGG+TGG + chr1_4:71963020-71963039 Msa0183120:CDS 55.0%
ACACACACACACACTACGGC+GGG - chr1_4:71963221-71963240 None:intergenic 55.0%
CACACACACACACACTACGG+CGG - chr1_4:71963222-71963241 None:intergenic 55.0%
GGCAGGGTCAAACAGAGCTT+AGG - chr1_4:71963313-71963332 None:intergenic 55.0%
AAGTGCTCTCCTCTCCCTGA+AGG - chr1_4:71963569-71963588 None:intergenic 55.0%
!! TAGAGAGTCGCGACTCGGTA+AGG - chr1_4:71964791-71964810 None:intergenic 55.0%
AAGAGCGGCTGCTGTGTTGG+CGG - chr1_4:71960402-71960421 None:intergenic 60.0%
CGGAAAGTTAACGCCGGTGG+AGG + chr1_4:71960702-71960721 Msa0183120:CDS 60.0%
ACCGTGGGAGATTCCTCCAC+CGG - chr1_4:71960718-71960737 None:intergenic 60.0%
CGGTCGTGATTAGGGGGTTG+TGG - chr1_4:71960871-71960890 None:intergenic 60.0%
!! GGGATTGGGAATGGTGGTGG+TGG + chr1_4:71961918-71961937 Msa0183120:CDS 60.0%
!! GTCGCGACTCGGTAAGGTGT+TGG - chr1_4:71964785-71964804 None:intergenic 60.0%
ACGACGACGTCTCCGGCCAT+AGG - chr1_4:71960427-71960446 None:intergenic 65.0%
GCCGGTGGAGGAATCTCCCA+CGG + chr1_4:71960714-71960733 Msa0183120:CDS 65.0%
CCACCGTTACCCGCAGGTGA+TGG - chr1_4:71960904-71960923 None:intergenic 65.0%
! CCATCACCTGCGGGTAACGG+TGG + chr1_4:71960901-71960920 Msa0183120:CDS 65.0%
! TCACCTGCGGGTAACGGTGG+TGG + chr1_4:71960904-71960923 Msa0183120:CDS 65.0%
TCACCACCACCGTTACCCGC+AGG - chr1_4:71960910-71960929 None:intergenic 65.0%
AACACTCTCGGGGCCGCCTT+TGG + chr1_4:71961683-71961702 Msa0183120:CDS 65.0%
ATGTTGCTAGGCGCGGCTGC+AGG + chr1_4:71962141-71962160 Msa0183120:CDS 65.0%
! GGCTGCTGTGTTGGCGGTCG+TGG - chr1_4:71960396-71960415 None:intergenic 70.0%
ACTCTCGGGGCCGCCTTTGG+TGG + chr1_4:71961686-71961705 Msa0183120:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 71959931 71964841 71959931 ID=Msa0183120;Name=Msa0183120
chr1_4 mRNA 71959931 71964841 71959931 ID=Msa0183120-mRNA-1;Parent=Msa0183120;Name=Msa0183120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=361|1|1|1|1|1|5|299|925
chr1_4 exon 71959931 71962162 71959931 ID=Msa0183120-mRNA-1:exon:24164;Parent=Msa0183120-mRNA-1
chr1_4 exon 71962918 71963041 71962918 ID=Msa0183120-mRNA-1:exon:24165;Parent=Msa0183120-mRNA-1
chr1_4 exon 71963559 71963852 71963559 ID=Msa0183120-mRNA-1:exon:24166;Parent=Msa0183120-mRNA-1
chr1_4 exon 71963953 71964155 71963953 ID=Msa0183120-mRNA-1:exon:24167;Parent=Msa0183120-mRNA-1
chr1_4 exon 71964257 71964841 71964257 ID=Msa0183120-mRNA-1:exon:24168;Parent=Msa0183120-mRNA-1
chr1_4 five_prime_UTR 71959931 71960291 71959931 ID=Msa0183120-mRNA-1:five_prime_utr;Parent=Msa0183120-mRNA-1
chr1_4 CDS 71960292 71962162 71960292 ID=Msa0183120-mRNA-1:cds;Parent=Msa0183120-mRNA-1
chr1_4 CDS 71962918 71963041 71962918 ID=Msa0183120-mRNA-1:cds;Parent=Msa0183120-mRNA-1
chr1_4 CDS 71963559 71963852 71963559 ID=Msa0183120-mRNA-1:cds;Parent=Msa0183120-mRNA-1
chr1_4 CDS 71963953 71964155 71963953 ID=Msa0183120-mRNA-1:cds;Parent=Msa0183120-mRNA-1
chr1_4 CDS 71964257 71964542 71964257 ID=Msa0183120-mRNA-1:cds;Parent=Msa0183120-mRNA-1
chr1_4 three_prime_UTR 71964543 71964841 71964543 ID=Msa0183120-mRNA-1:three_prime_utr;Parent=Msa0183120-mRNA-1
Gene Sequence

>Msa0183120

ATGCAAACTATTAAAAAATCCTTCAAATCTTATGCTTCTCAGAACAATAAACATTCTAGAAAATTTTCTGCAGATTCCGACCACGAACAGCTCCCTATTCTCCACGACCGCCAACACAGCAGCCGCTCTTTTCCTATGGCCGGAGACGTCGTCGTGAAAATCAACGACGACGGCGGTGAACCTTCCCAAGCCAATAACAAGATTTGGAGAGAATCCAGCTACGATTTTTGGAATGACACCGGCGACAATGTTCGTGATGAGAGTTTTGATTTCCGCCACAAAGCTAAGCTAGAGGATCCACCGTCGCAACTAATCGGAAAATTTCTTCATAAACAGCGTGCCTCCGGTGATATGTCATTGGACATGGATTTGGAGATGGAGGAGCTTCAGAATGAAGGTAACGTCGCTGACGGAAAGTTAACGCCGGTGGAGGAATCTCCCACGGTGATTCAACGCGAGTTGAAAGTTAGTTTCGAGGAACCAGCTTCAAATTCGAATGGGATTGAAGCTGTGAACGATCCTGTTCGGAGAAGACACAGCAAGGATTCGCCGTCAATGGGTGAGTATGCTCGGCCTCCACAACCCCCTAATCACGACCGTCGTCATTCTCCATCACCTGCGGGTAACGGTGGTGGTGATTGCGAGGTTTTGAGGTGTTCCTCCAATGCTTCGTTTGAGAGGAACCTCTCAATGCAGAGAAAATCAACGTTAATGAAAACTAAAACTAAGTCCAGATTAATGGACCCACCCGATGAACCGGATAGAAGATCTGGTCGGGTTGCTAAATCGAGTCAGCTTTTGTCTGGGATGATTGGGAGGAAAGGTGATGATGATGAAGATGATCCTTTTATGGAAGAGGATTTTCCAGATGAGTATAAGAAAACACATTTCAGTCTTTGGATTCTTCTTGAATGGTTGAGTTTGATTTTAATTATTGGTGCATTAGTAACAACTTTGAGTGTTCCTTTGTTGAGGGATAAGACTCTGTGGCAGCTTAAGTTTTGGAAATGGGAAGTGATGATTCTTGTTCTAATATGTGGTAGATTGGTTTCTGATTGGGTTATTAGGATTGCTGTGTTTTGTATTGAAAGGAATTTCCTATTGAGAAAGAGGGTTCTTTATTTTGTGTATGGTGTCAGGAAAGCTGTGCAAAATTGTGTTTGGTTAGGGCTTGTTTTGATTGCATGGCATTTTCTGTTTGATAAGAGAGTTCAAAGAGAGACAAACAGTGATGTCCTTCAATATGTGACCAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGTGAAAACTCTAGTGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATACTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTGATCGAAACACTCTCGGGGCCGCCTTTGGTGGAGATTCGAAAGGCGGAAGAGGAAGAGGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAGAATGCCGGTGTTAGCATACCTGCTGACCTAAGAGCTAGTGCCTTTCCTAACATCAAGAGTGGAAGGTTGAGGAGTGGAATGCTTCAGAAAAGCCCTGTGGTTAAGAGTGGCAAGTTTTCAATGCCACTTTCCAAGAAATCTGATGATAATGGGATTGGGAATGGTGGTGGTGGGATAACTATTGATCACTTGCACAAGCTGAATCCAAATAACGTGTCGGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCATGGGGCACTTACTACATTGGATGAGCAGATACTTGATTCTTCTGCTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATACCCTGAGGACTTAATGCGTTTTATGCGAGAAGATGAGGCTATAAAAACCATAAATCTATTTGAAGGAGCGTCTGATTCTGGGAAAATAAGCAAATCCGCGTTGAAGAACTGGGTGGTTAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAACAAACTTCATCGAATGCTCAATTTCTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCTACTACCAAATTTCTTCTTTTTGTGAGCTCACAACTTGTCTTGGTTGCATTTATATTCGGAAACACATGCAAGACTGTATTTGAAGCAATCATATTTTTATTTGTAATGCATCCATTTGATGTGGGAGATAGATGTGAAATTGATGCGACCCAGATGGTTGTAGAAGAGATGAACATCTTGACCACCGTATTTCTGAGATACGATAATCAAAAGATAACGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGTAGTCCTGACATGGGAGATTCTATTGAATTCTGTATCCATGTAGCTACCCCACCTGAAAAGATTTCACTCATGAAACACAGAATACATAATTTCATTGATAACAAGAAGGAGCACTGGTATCCTTCACCGTTTATAGTCTTGAAGGATCACGACCAATTGAACATGGTTAAAGTGGCGATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATATATCAGGAGGTCTCTTCTTATTGAAGAGTTGATGAAGATTTTCAGGGATCTCGACATTCAGTACCGTCTCATGCCTCTCGACATTAATGTTAGAGGTTTGCCTACCACTTCTGATCGTCTTCCAGCTAGTTGGACAACAATCACAAATTGA
Protein sequence

>Msa0183120

MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGEPSQANNKIWRESSYDFWNDTGDNVRDESFDFRHKAKLEDPPSQLIGKFLHKQRASGDMSLDMDLEMEELQNEGNVADGKLTPVEESPTVIQRELKVSFEEPASNSNGIEAVNDPVRRRHSKDSPSMGEYARPPQPPNHDRRHSPSPAGNGGGDCEVLRCSSNASFERNLSMQRKSTLMKTKTKSRLMDPPDEPDRRSGRVAKSSQLLSGMIGRKGDDDEDDPFMEEDFPDEYKKTHFSLWILLEWLSLILIIGALVTTLSVPLLRDKTLWQLKFWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETNSDVLQYVTKVLVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVSIPADLRASAFPNIKSGRLRSGMLQKSPVVKSGKFSMPLSKKSDDNGIGNGGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSSADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRYDNQKITIPNSVLATKAIHNFYRSPDMGDSIEFCIHVATPPEKISLMKHRIHNFIDNKKEHWYPSPFIVLKDHDQLNMVKVAIWPTHRMNFQDMGERYIRRSLLIEELMKIFRDLDIQYRLMPLDINVRGLPTTSDRLPASWTTITN*