Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070920 | sp|Q8LGG8|USPAL_ARATH | 31.395 | 86 | 59 | 0 | 94 | 179 | 77 | 162 | 6.09e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070920 | A0A6M3SL49 | 91.429 | 175 | 9 | 1 | 20 | 188 | 1 | 175 | 1.41e-112 | 330 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023000 | Msa0070920 | 0.821406 | 4.106138e-53 | -8.615850e-47 |
| Msa0070860 | Msa0070920 | 0.813113 | 3.016861e-51 | -8.615850e-47 |
| Msa0070920 | Msa0118780 | 0.811581 | 6.517621e-51 | -8.615850e-47 |
| Msa0070920 | Msa0162130 | 0.851887 | 6.619937e-61 | -8.615850e-47 |
| Msa0070920 | Msa0534900 | 0.808633 | 2.813382e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070920 | MtrunA17_Chr1g0176321 | 88.701 | 177 | 12 | 1 | 20 | 188 | 1 | 177 | 1.37e-114 | 326 |
| Msa0070920 | MtrunA17_Chr1g0176311 | 77.202 | 193 | 36 | 3 | 1 | 188 | 1 | 190 | 1.22e-102 | 296 |
| Msa0070920 | MtrunA17_Chr1g0192651 | 39.264 | 163 | 84 | 3 | 23 | 183 | 10 | 159 | 1.16e-31 | 114 |
| Msa0070920 | MtrunA17_Chr1g0195661 | 39.106 | 179 | 87 | 6 | 14 | 185 | 4 | 167 | 2.07e-30 | 111 |
| Msa0070920 | MtrunA17_Chr1g0194801 | 37.126 | 167 | 82 | 5 | 23 | 181 | 7 | 158 | 4.06e-28 | 105 |
| Msa0070920 | MtrunA17_Chr5g0427291 | 35.542 | 166 | 92 | 6 | 24 | 179 | 10 | 170 | 2.33e-25 | 98.6 |
| Msa0070920 | MtrunA17_Chr7g0269301 | 35.714 | 168 | 93 | 5 | 21 | 185 | 7 | 162 | 5.03e-21 | 86.7 |
| Msa0070920 | MtrunA17_Chr4g0001641 | 47.541 | 61 | 32 | 0 | 119 | 179 | 5 | 65 | 2.54e-17 | 74.3 |
| Msa0070920 | MtrunA17_Chr2g0323291 | 30.508 | 177 | 94 | 6 | 23 | 185 | 26 | 187 | 7.35e-17 | 77.0 |
| Msa0070920 | MtrunA17_Chr2g0294421 | 32.386 | 176 | 100 | 5 | 15 | 185 | 2 | 163 | 1.42e-15 | 72.0 |
| Msa0070920 | MtrunA17_Chr4g0032261 | 31.325 | 166 | 91 | 3 | 23 | 179 | 6 | 157 | 3.73e-15 | 71.2 |
| Msa0070920 | MtrunA17_Chr6g0450171 | 31.034 | 87 | 60 | 0 | 93 | 179 | 76 | 162 | 1.39e-14 | 69.7 |
| Msa0070920 | MtrunA17_Chr5g0433951 | 32.022 | 178 | 90 | 6 | 24 | 188 | 7 | 166 | 2.83e-13 | 65.9 |
| Msa0070920 | MtrunA17_Chr7g0240701 | 30.120 | 166 | 93 | 5 | 23 | 179 | 6 | 157 | 2.17e-12 | 63.5 |
| Msa0070920 | MtrunA17_Chr4g0008801 | 42.424 | 66 | 38 | 0 | 114 | 179 | 92 | 157 | 1.44e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070920 | AT3G11930.2 | 55.814 | 172 | 63 | 3 | 23 | 186 | 34 | 200 | 1.00e-62 | 195 |
| Msa0070920 | AT3G11930.4 | 55.491 | 173 | 63 | 3 | 23 | 186 | 34 | 201 | 1.40e-62 | 195 |
| Msa0070920 | AT3G11930.1 | 56.140 | 171 | 63 | 3 | 23 | 186 | 34 | 199 | 2.64e-62 | 194 |
| Msa0070920 | AT3G11930.3 | 48.485 | 198 | 63 | 4 | 23 | 186 | 34 | 226 | 2.11e-56 | 180 |
| Msa0070920 | AT3G58450.2 | 51.875 | 160 | 71 | 2 | 24 | 183 | 32 | 185 | 5.74e-51 | 165 |
| Msa0070920 | AT3G58450.1 | 49.697 | 165 | 74 | 2 | 24 | 183 | 32 | 192 | 9.03e-50 | 162 |
| Msa0070920 | AT1G09740.2 | 35.503 | 169 | 90 | 4 | 24 | 183 | 10 | 168 | 3.87e-27 | 103 |
| Msa0070920 | AT1G09740.1 | 35.503 | 169 | 90 | 4 | 24 | 183 | 10 | 168 | 3.87e-27 | 103 |
| Msa0070920 | AT3G62550.1 | 36.585 | 164 | 82 | 5 | 23 | 179 | 8 | 156 | 6.42e-27 | 102 |
| Msa0070920 | AT2G47710.1 | 33.129 | 163 | 98 | 3 | 21 | 182 | 7 | 159 | 4.25e-24 | 95.1 |
| Msa0070920 | AT1G68300.1 | 34.911 | 169 | 93 | 4 | 15 | 179 | 2 | 157 | 1.10e-22 | 91.3 |
| Msa0070920 | AT3G01520.1 | 31.395 | 86 | 59 | 0 | 94 | 179 | 77 | 162 | 6.19e-15 | 71.2 |
| Msa0070920 | AT5G14680.1 | 38.571 | 70 | 43 | 0 | 110 | 179 | 93 | 162 | 9.31e-15 | 70.5 |
| Msa0070920 | AT3G17020.1 | 32.530 | 166 | 90 | 6 | 23 | 179 | 8 | 160 | 3.79e-13 | 65.9 |
| Msa0070920 | AT3G03270.2 | 32.121 | 165 | 89 | 5 | 24 | 179 | 7 | 157 | 1.58e-12 | 64.3 |
| Msa0070920 | AT1G11360.2 | 28.324 | 173 | 98 | 6 | 23 | 183 | 39 | 197 | 6.03e-12 | 63.9 |
| Msa0070920 | AT1G11360.1 | 28.324 | 173 | 98 | 6 | 23 | 183 | 39 | 197 | 6.03e-12 | 63.9 |
| Msa0070920 | AT1G11360.4 | 28.324 | 173 | 98 | 6 | 23 | 183 | 39 | 197 | 6.03e-12 | 63.9 |
| Msa0070920 | AT1G11360.3 | 28.324 | 173 | 98 | 6 | 23 | 183 | 39 | 197 | 6.03e-12 | 63.9 |
| Msa0070920 | AT3G53990.1 | 26.506 | 166 | 99 | 3 | 26 | 182 | 9 | 160 | 4.99e-11 | 60.1 |
Find 57 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAAAGTGTGATTCTTAA+TGG | 0.228368 | 1_2:-41923021 | Msa0070920:CDS |
| TATGCATAAGTGTGGAAATT+TGG | 0.264690 | 1_2:+41925316 | None:intergenic |
| TGATAACCTCTTCAACGTTT+TGG | 0.321558 | 1_2:-41925407 | Msa0070920:CDS |
| CCAGCTGGTCCCATAGGTAT+AGG | 0.340250 | 1_2:+41925292 | None:intergenic |
| GGTCTTCTTCTTCTTCGAAC+TGG | 0.365606 | 1_2:+41918591 | None:intergenic |
| AGATAAAGAAAGAGAGAAGA+AGG | 0.377116 | 1_2:-41918634 | Msa0070920:CDS |
| TTTGGTGGCAGAGCATTTCT+TGG | 0.378489 | 1_2:-41922802 | Msa0070920:intron |
| TTCAAGCATGAATTCATCAT+TGG | 0.397472 | 1_2:-41918680 | Msa0070920:intron |
| GCAAGTTGATCTCTTAATCA+TGG | 0.412365 | 1_2:-41922959 | Msa0070920:CDS |
| CAGCTGGTCCCATAGGTATA+GGG | 0.428625 | 1_2:+41925293 | None:intergenic |
| ACCGAAAATAAATCGGTGTT+TGG | 0.440764 | 1_2:+41918570 | None:intergenic |
| ATCATGGGTAGTCGTGGCCT+TGG | 0.451807 | 1_2:-41922943 | Msa0070920:CDS |
| CTTCGAAACCGAAAATAAAT+CGG | 0.452732 | 1_2:+41918563 | None:intergenic |
| CCTATGGGACCAGCTGGTAT+TGG | 0.470932 | 1_2:-41925286 | Msa0070920:intron |
| TTATGCATACCCTATACCTA+TGG | 0.478213 | 1_2:-41925302 | Msa0070920:CDS |
| GATAAAGAAAGAGAGAAGAA+GGG | 0.489410 | 1_2:-41918633 | Msa0070920:CDS |
| TGCAAGAGAAATGATTTGTC+AGG | 0.490363 | 1_2:-41922995 | Msa0070920:CDS |
| ATCAGCAGCTATTGCCTCAC+GGG | 0.496784 | 1_2:-41924480 | Msa0070920:CDS |
| TGAGGGGAGGTGCAGAAGAA+AGG | 0.498421 | 1_2:-41925501 | Msa0070920:CDS |
| GTGGCCTTGGCAAACTCAAA+AGG | 0.501962 | 1_2:-41922930 | Msa0070920:intron |
| GCAAATGTGCAAGGATAAGC+AGG | 0.503833 | 1_2:-41924453 | Msa0070920:intron |
| GGTGGCTTCACAATGAGAAT+AGG | 0.504003 | 1_2:+41922742 | None:intergenic |
| TGGAAGTGTTGATCAAGTGA+GGG | 0.512230 | 1_2:-41925518 | Msa0070920:CDS |
| TCTTTATCTCTGTGATCGCA+TGG | 0.516501 | 1_2:+41918648 | None:intergenic |
| AAACGTTGAAGAGGTTATCA+AGG | 0.516848 | 1_2:+41925410 | None:intergenic |
| CCAATACCAGCTGGTCCCAT+AGG | 0.522576 | 1_2:+41925286 | None:intergenic |
| AGAAAGGAGAATGAAGATGA+AGG | 0.523092 | 1_2:-41925485 | Msa0070920:CDS |
| AAAAGGGTGATGGAGGAAGT+AGG | 0.524919 | 1_2:-41925541 | None:intergenic |
| TGGAGCAACATTTGAAAATG+AGG | 0.537510 | 1_2:-41925368 | Msa0070920:CDS |
| TTGGCTACTGATACTATGGA+TGG | 0.541313 | 1_2:-41925388 | Msa0070920:CDS |
| CTCTTAATCATGGGTAGTCG+TGG | 0.541714 | 1_2:-41922949 | Msa0070920:CDS |
| AAGCTTGTATGCTCTTAAGT+TGG | 0.550160 | 1_2:-41925434 | Msa0070920:CDS |
| TACTTGGAGATTTGAACAAG+TGG | 0.551245 | 1_2:+41918509 | None:intergenic |
| CAAGTTGATCTCTTAATCAT+GGG | 0.558572 | 1_2:-41922958 | Msa0070920:CDS |
| GTGGAAGTGTTGATCAAGTG+AGG | 0.562018 | 1_2:-41925519 | Msa0070920:CDS |
| ATTTGAAAATGAGGAGGGGA+TGG | 0.571231 | 1_2:-41925359 | Msa0070920:CDS |
| CCTATACCTATGGGACCAGC+TGG | 0.573743 | 1_2:-41925292 | Msa0070920:CDS |
| AATCAGCAGCTATTGCCTCA+CGG | 0.579592 | 1_2:-41924481 | Msa0070920:CDS |
| CAGTAGCCAAAACGTTGAAG+AGG | 0.579799 | 1_2:+41925401 | None:intergenic |
| TATGCATACCCTATACCTAT+GGG | 0.588273 | 1_2:-41925301 | Msa0070920:CDS |
| AGAGGAATCAAAAGCTCGCA+AGG | 0.588728 | 1_2:-41918534 | Msa0070920:CDS |
| GTATAGGGTATGCATAAGTG+TGG | 0.596401 | 1_2:+41925308 | None:intergenic |
| ACGGGCTTTGCAAATGTGCA+AGG | 0.605600 | 1_2:-41924462 | Msa0070920:CDS |
| AATGAAGATGAAGGTGATGG+TGG | 0.605709 | 1_2:-41925476 | Msa0070920:CDS |
| GCAACATTTGAAAATGAGGA+GGG | 0.608477 | 1_2:-41925364 | Msa0070920:CDS |
| ATATACTAACCAATACCAGC+TGG | 0.608648 | 1_2:+41925277 | None:intergenic |
| GGAAGTGTTGATCAAGTGAG+GGG | 0.617330 | 1_2:-41925517 | Msa0070920:CDS |
| AACGTTGAAGAGGTTATCAA+GGG | 0.618188 | 1_2:+41925411 | None:intergenic |
| AGCAACATTTGAAAATGAGG+AGG | 0.624378 | 1_2:-41925365 | Msa0070920:CDS |
| AGGGTGATGGAGGAAGTAGG+TGG | 0.640246 | 1_2:-41925538 | None:intergenic |
| CAACATTTGAAAATGAGGAG+GGG | 0.642841 | 1_2:-41925363 | Msa0070920:CDS |
| TCGGTTTCGAAGCTTACCAG+AGG | 0.657849 | 1_2:-41918552 | Msa0070920:CDS |
| GTGGCAATAGATGAGAGTGA+TGG | 0.658459 | 1_2:-41925457 | Msa0070920:CDS |
| GCACATTTGCAAAGCCCGTG+AGG | 0.665936 | 1_2:+41924466 | None:intergenic |
| TCTCATTGTGAAGCCACCAG+AGG | 0.677993 | 1_2:-41922737 | Msa0070920:CDS |
| GAGAATGAAGATGAAGGTGA+TGG | 0.692454 | 1_2:-41925479 | Msa0070920:CDS |
| AGTGTTGATCAAGTGAGGGG+AGG | 0.733239 | 1_2:-41925514 | Msa0070920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATTAAATAAATTTA+GGG | + | chr1_2:41920851-41920870 | None:intergenic | 0.0% |
| !! | TATAAATATTAAATAAATTT+AGG | + | chr1_2:41920852-41920871 | None:intergenic | 0.0% |
| !! | TATATATAAGAAATTTATAG+GGG | + | chr1_2:41919170-41919189 | None:intergenic | 10.0% |
| !!! | ATTTTGTTTTTATTTTAGTA+GGG | + | chr1_2:41919895-41919914 | None:intergenic | 10.0% |
| !!! | TATTTTGTTTTTATTTTAGT+AGG | + | chr1_2:41919896-41919915 | None:intergenic | 10.0% |
| !! | AAATAATGACATTAATTAAT+AGG | + | chr1_2:41919936-41919955 | None:intergenic | 10.0% |
| !!! | TCACTATAAAAAATATTTTA+GGG | + | chr1_2:41921961-41921980 | None:intergenic | 10.0% |
| !!! | ATCACTATAAAAAATATTTT+AGG | + | chr1_2:41921962-41921981 | None:intergenic | 10.0% |
| !! | GTCAATAAAAAAAAATTTAT+TGG | - | chr1_2:41922076-41922095 | Msa0070920:intron | 10.0% |
| !!! | TAAATTTTTGTTTCTTAAAA+AGG | + | chr1_2:41922113-41922132 | None:intergenic | 10.0% |
| !! | GAAAATTAAACATAAATAAA+TGG | + | chr1_2:41922654-41922673 | None:intergenic | 10.0% |
| !!! | CATTTAATTTTTTTAAGAAA+AGG | - | chr1_2:41923278-41923297 | Msa0070920:intron | 10.0% |
| !!! | TTTAATTTTTTTAAGAAAAG+GGG | - | chr1_2:41923280-41923299 | Msa0070920:intron | 10.0% |
| !! | AATAGGATAAATTAAATGAA+GGG | + | chr1_2:41919919-41919938 | None:intergenic | 15.0% |
| !! | TAATAGGATAAATTAAATGA+AGG | + | chr1_2:41919920-41919939 | None:intergenic | 15.0% |
| !!! | ATAAAAAAAAGTGTAATTCA+TGG | + | chr1_2:41920257-41920276 | None:intergenic | 15.0% |
| !! | AACAATTAACGTTATTAATA+TGG | - | chr1_2:41920287-41920306 | Msa0070920:intron | 15.0% |
| !! | TATATGTACTAAATTTACTT+TGG | - | chr1_2:41920868-41920887 | Msa0070920:intron | 15.0% |
| !!! | TAAATTATGGCTTTTAAATT+TGG | - | chr1_2:41920929-41920948 | Msa0070920:intron | 15.0% |
| !!! | GTTCTAATATATTTTACATT+TGG | - | chr1_2:41921220-41921239 | Msa0070920:intron | 15.0% |
| !!! | ATACCATTTTTAAAAGATTA+GGG | + | chr1_2:41921371-41921390 | None:intergenic | 15.0% |
| !!! | AATACCATTTTTAAAAGATT+AGG | + | chr1_2:41921372-41921391 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTTGTTTTATACT+TGG | + | chr1_2:41921703-41921722 | None:intergenic | 15.0% |
| !! | TTTATTCTAGATAGAAATAT+TGG | - | chr1_2:41922228-41922247 | Msa0070920:intron | 15.0% |
| !! | AGTTAATGATATTTAACAAA+AGG | - | chr1_2:41922270-41922289 | Msa0070920:intron | 15.0% |
| !! | AAAAAATAATTTATCACTTG+TGG | - | chr1_2:41922479-41922498 | Msa0070920:intron | 15.0% |
| !! | AAAAATAATTTATCACTTGT+GGG | - | chr1_2:41922480-41922499 | Msa0070920:intron | 15.0% |
| !! | TTAAAACTACTTATAACAAA+GGG | - | chr1_2:41922541-41922560 | Msa0070920:intron | 15.0% |
| !! | TCTATGTATAAAAAAAAACT+TGG | - | chr1_2:41922672-41922691 | Msa0070920:intron | 15.0% |
| !!! | GTGTTATTATACAATAATAT+TGG | + | chr1_2:41922744-41922763 | None:intergenic | 15.0% |
| !!! | TTTAAAATGGATTTTTAACA+AGG | + | chr1_2:41924478-41924497 | None:intergenic | 15.0% |
| !!! | ATGCAAATTTTAGAATTTTA+GGG | + | chr1_2:41924710-41924729 | None:intergenic | 15.0% |
| !!! | AATGCAAATTTTAGAATTTT+AGG | + | chr1_2:41924711-41924730 | None:intergenic | 15.0% |
| !!! | AAATTCTAAAATTTGCATTT+TGG | - | chr1_2:41924712-41924731 | Msa0070920:intron | 15.0% |
| !!! | TTTAAGTCTTTGTTAATTTT+AGG | - | chr1_2:41924752-41924771 | Msa0070920:intron | 15.0% |
| !! | AATTGAAATTAAAAAGAACT+TGG | + | chr1_2:41924865-41924884 | None:intergenic | 15.0% |
| !!! | TTTTAATTTCAATTTTTTGC+AGG | - | chr1_2:41924871-41924890 | Msa0070920:intron | 15.0% |
| !!! | TCTTGTTTTTAATGGATAAA+AGG | + | chr1_2:41918823-41918842 | None:intergenic | 20.0% |
| !! | AAAAATGATGTAACTTTGTA+AGG | - | chr1_2:41918923-41918942 | Msa0070920:intron | 20.0% |
| !!! | TTAATATTGTCCAATTTTCT+TGG | - | chr1_2:41918953-41918972 | Msa0070920:intron | 20.0% |
| !!! | TAAGAAATTGCAAAAGTTTT+GGG | + | chr1_2:41919118-41919137 | None:intergenic | 20.0% |
| !!! | ATAAGAAATTGCAAAAGTTT+TGG | + | chr1_2:41919119-41919138 | None:intergenic | 20.0% |
| !!! | TGTTGCAAATTTTTTTTTCT+AGG | - | chr1_2:41919345-41919364 | Msa0070920:intron | 20.0% |
| !!! | AAATTATTTTCATGATCAAC+AGG | - | chr1_2:41919797-41919816 | Msa0070920:intron | 20.0% |
| !!! | TGTTTAGAATTTCAATTATC+TGG | + | chr1_2:41919985-41920004 | None:intergenic | 20.0% |
| !!! | AGAATCTCATTATTTTTTCT+AGG | - | chr1_2:41920130-41920149 | Msa0070920:intron | 20.0% |
| !!! | GAATCTCATTATTTTTTCTA+GGG | - | chr1_2:41920131-41920150 | Msa0070920:intron | 20.0% |
| !!! | TTCTTTTGGGATTTTATTTT+CGG | + | chr1_2:41920178-41920197 | None:intergenic | 20.0% |
| !! | ACGAAACTGTATTAAATTTA+TGG | - | chr1_2:41920610-41920629 | Msa0070920:intron | 20.0% |
| !! | CGAAACTGTATTAAATTTAT+GGG | - | chr1_2:41920611-41920630 | Msa0070920:intron | 20.0% |
| !!! | GTGATGATGTTTTAAAAATT+CGG | - | chr1_2:41920895-41920914 | Msa0070920:intron | 20.0% |
| !!! | AATAAGCTTGCTAATAATTT+TGG | - | chr1_2:41921175-41921194 | Msa0070920:intron | 20.0% |
| !!! | CTAATATATTTTACATTTGG+TGG | - | chr1_2:41921223-41921242 | Msa0070920:intron | 20.0% |
| !!! | ATTTTTAAAAGATTAGGGTT+CGG | + | chr1_2:41921366-41921385 | None:intergenic | 20.0% |
| !!! | CTATCTAGAATAAATAGTTT+AGG | + | chr1_2:41922222-41922241 | None:intergenic | 20.0% |
| !!! | CTTTGTTATAAGTAGTTTTA+AGG | + | chr1_2:41922542-41922561 | None:intergenic | 20.0% |
| !! | CTTAAAACTACTTATAACAA+AGG | - | chr1_2:41922540-41922559 | Msa0070920:intron | 20.0% |
| !!! | AATAACACATGTGATTTTTT+AGG | - | chr1_2:41922756-41922775 | Msa0070920:CDS | 20.0% |
| !!! | ATAACACATGTGATTTTTTA+GGG | - | chr1_2:41922757-41922776 | Msa0070920:CDS | 20.0% |
| !!! | TTATTTTAACATCAGCAATT+AGG | + | chr1_2:41922867-41922886 | None:intergenic | 20.0% |
| !!! | ACCTTAAATCTTTTCAATAT+GGG | + | chr1_2:41923323-41923342 | None:intergenic | 20.0% |
| !!! | AACCTTAAATCTTTTCAATA+TGG | + | chr1_2:41923324-41923343 | None:intergenic | 20.0% |
| !!! | TATTGAAAAGATTTAAGGTT+CGG | - | chr1_2:41923324-41923343 | Msa0070920:intron | 20.0% |
| !! | ATTAATTAAATGAAACCAAG+AGG | + | chr1_2:41923410-41923429 | None:intergenic | 20.0% |
| !!! | AGTTTGAAATGATAAAAGAA+AGG | - | chr1_2:41923462-41923481 | Msa0070920:intron | 20.0% |
| !!! | TTATCCACATTTTATTGATT+TGG | - | chr1_2:41923494-41923513 | Msa0070920:intron | 20.0% |
| !!! | TTTTGAAAGATAATTGAACT+AGG | - | chr1_2:41923820-41923839 | Msa0070920:intron | 20.0% |
| !! | TAGGTTTAATGTAATAGTTT+AGG | + | chr1_2:41923972-41923991 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr1_2:41924088-41924107 | None:intergenic | 20.0% |
| !!! | AGAATTAAGTTGGTATTTTT+AGG | + | chr1_2:41924101-41924120 | None:intergenic | 20.0% |
| !! | ACTTAAAATAAAATGACACA+AGG | + | chr1_2:41924739-41924758 | None:intergenic | 20.0% |
| !!! | TTTTTTGGTCAATTACATTT+TGG | - | chr1_2:41924797-41924816 | Msa0070920:intron | 20.0% |
| !!! | TGTGTTGATTTTTATGTATT+TGG | + | chr1_2:41925228-41925247 | None:intergenic | 20.0% |
| !!! | CAATTCATCAAAAATGTTTT+CGG | - | chr1_2:41925277-41925296 | Msa0070920:intron | 20.0% |
| ! | TCCATTAAAAACAAGAACAT+TGG | - | chr1_2:41918827-41918846 | Msa0070920:intron | 25.0% |
| !!! | TCCAATGTTCTTGTTTTTAA+TGG | + | chr1_2:41918831-41918850 | None:intergenic | 25.0% |
| ! | AATTATGAGAGAATTAGACA+TGG | + | chr1_2:41918900-41918919 | None:intergenic | 25.0% |
| ! | CAAATAATCAACATTCAAAG+GGG | + | chr1_2:41919253-41919272 | None:intergenic | 25.0% |
| ! | GCAAATAATCAACATTCAAA+GGG | + | chr1_2:41919254-41919273 | None:intergenic | 25.0% |
| ! | AGCAAATAATCAACATTCAA+AGG | + | chr1_2:41919255-41919274 | None:intergenic | 25.0% |
| !! | TTCTAGGCTTTATAATAATC+TGG | - | chr1_2:41919361-41919380 | Msa0070920:intron | 25.0% |
| ! | ATCACAAAAGAAAAAGGAAA+TGG | + | chr1_2:41919464-41919483 | None:intergenic | 25.0% |
| !! | CAAAGTATCACAAAAGAAAA+AGG | + | chr1_2:41919470-41919489 | None:intergenic | 25.0% |
| ! | ATGGATAAAAAGTTGTTGAA+AGG | + | chr1_2:41919494-41919513 | None:intergenic | 25.0% |
| !!! | AAGGAAGATTTTTTTAAGGA+AGG | + | chr1_2:41919862-41919881 | None:intergenic | 25.0% |
| !!! | GTGAAAGGAAGATTTTTTTA+AGG | + | chr1_2:41919866-41919885 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATTTTAGTAGGG+AGG | + | chr1_2:41919892-41919911 | None:intergenic | 25.0% |
| ! | CTCTTGTAGACAATATAATT+TGG | + | chr1_2:41920098-41920117 | None:intergenic | 25.0% |
| ! | AAAATCCCAAAAGAAATAGA+TGG | - | chr1_2:41920183-41920202 | Msa0070920:intron | 25.0% |
| !!! | ATACTCCATCTATTTCTTTT+GGG | + | chr1_2:41920191-41920210 | None:intergenic | 25.0% |
| !!! | AATACTCCATCTATTTCTTT+TGG | + | chr1_2:41920192-41920211 | None:intergenic | 25.0% |
| ! | ATTCATGGTACAAAAATGAA+AGG | + | chr1_2:41920242-41920261 | None:intergenic | 25.0% |
| !!! | TAACTACTTTTTGATATGAC+TGG | - | chr1_2:41920392-41920411 | Msa0070920:intron | 25.0% |
| !! | TCCATTATTTAAGATGTATG+CGG | + | chr1_2:41920488-41920507 | None:intergenic | 25.0% |
| ! | AATTTAATACAGTTTCGTCA+AGG | + | chr1_2:41920608-41920627 | None:intergenic | 25.0% |
| ! | GCACATATTAAGATGTTTAA+AGG | - | chr1_2:41920665-41920684 | Msa0070920:intron | 25.0% |
| !! | CTATAAAATGCACAAGTTTT+AGG | + | chr1_2:41920702-41920721 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTTGTTTTATGCA+TGG | - | chr1_2:41921191-41921210 | Msa0070920:intron | 25.0% |
| !!! | TTTTTAAAAGATTAGGGTTC+GGG | + | chr1_2:41921365-41921384 | None:intergenic | 25.0% |
| !!! | GAACCCTAATCTTTTAAAAA+TGG | - | chr1_2:41921365-41921384 | Msa0070920:intron | 25.0% |
| ! | AAATGCTTCTATTACTAGAT+AGG | - | chr1_2:41921494-41921513 | Msa0070920:intron | 25.0% |
| !! | GTTAAGATATGTTTGAAACA+AGG | - | chr1_2:41921673-41921692 | Msa0070920:intron | 25.0% |
| ! | TTGATACGAGGAAAAAAAAA+TGG | - | chr1_2:41921894-41921913 | Msa0070920:intron | 25.0% |
| ! | GAAAAAAAAATGGACATCTT+GGG | - | chr1_2:41921904-41921923 | Msa0070920:intron | 25.0% |
| ! | ATAGTGATACCTCTTAAAAA+AGG | - | chr1_2:41921974-41921993 | Msa0070920:intron | 25.0% |
| !!! | TAGCATTTTCCTTTTTTAAG+AGG | + | chr1_2:41921986-41922005 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTTTGAGTTCA+AGG | - | chr1_2:41922033-41922052 | Msa0070920:intron | 25.0% |
| ! | AAAATTTATTGGACTGATTG+TGG | - | chr1_2:41922087-41922106 | Msa0070920:intron | 25.0% |
| ! | TAAAGCTTAAAACCTTATGT+TGG | - | chr1_2:41922131-41922150 | Msa0070920:intron | 25.0% |
| ! | AACATAAGCTTAATATGGAA+CGG | + | chr1_2:41922320-41922339 | None:intergenic | 25.0% |
| ! | AAGCAAACATAAGCTTAATA+TGG | + | chr1_2:41922325-41922344 | None:intergenic | 25.0% |
| ! | TTGATTCTAACTTGATGTTA+TGG | - | chr1_2:41922419-41922438 | Msa0070920:intron | 25.0% |
| ! | CCTCTTAAAAATAACATTCA+TGG | + | chr1_2:41922580-41922599 | None:intergenic | 25.0% |
| !!! | CCATGAATGTTATTTTTAAG+AGG | - | chr1_2:41922577-41922596 | Msa0070920:intron | 25.0% |
| !! | TTGATTTTGTCATCGAAAAA+AGG | - | chr1_2:41922601-41922620 | Msa0070920:intron | 25.0% |
| ! | AATGATTTATGGAAGTTCAA+TGG | - | chr1_2:41922716-41922735 | Msa0070920:CDS | 25.0% |
| !!! | TAACACATGTGATTTTTTAG+GGG | - | chr1_2:41922758-41922777 | Msa0070920:CDS | 25.0% |
| ! | CTGTGTGAATATAAATATAG+AGG | - | chr1_2:41922799-41922818 | Msa0070920:intron | 25.0% |
| ! | TGAATATAAATATAGAGGCA+TGG | - | chr1_2:41922804-41922823 | Msa0070920:intron | 25.0% |
| ! | CTGATGTTAAAATAACACAA+CGG | - | chr1_2:41922872-41922891 | Msa0070920:intron | 25.0% |
| !! | AAAATGGTCAATGTTTTCTT+GGG | + | chr1_2:41922949-41922968 | None:intergenic | 25.0% |
| !! | AAGAAAACATTGACCATTTT+GGG | - | chr1_2:41922949-41922968 | Msa0070920:CDS | 25.0% |
| !! | TTCATTTGACAATTTTCTTC+TGG | - | chr1_2:41923150-41923169 | Msa0070920:intron | 25.0% |
| !! | CCTTAAATCTTTTCAATATG+GGG | + | chr1_2:41923322-41923341 | None:intergenic | 25.0% |
| !! | ATTGAAAAGATTTAAGGTTC+GGG | - | chr1_2:41923325-41923344 | Msa0070920:intron | 25.0% |
| ! | CAATAAAATGTGGATAAACT+AGG | + | chr1_2:41923491-41923510 | None:intergenic | 25.0% |
| !!! | TTTTAAAATGAAAAGCCAAG+TGG | - | chr1_2:41923623-41923642 | Msa0070920:intron | 25.0% |
| ! | TTGAACTAGGATTAAACTAA+CGG | - | chr1_2:41923833-41923852 | Msa0070920:intron | 25.0% |
| ! | GAAACTTAGAATGTACATTT+AGG | + | chr1_2:41924051-41924070 | None:intergenic | 25.0% |
| !! | TCATTGTTATACCCTAATTT+TGG | - | chr1_2:41924074-41924093 | Msa0070920:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr1_2:41924089-41924108 | None:intergenic | 25.0% |
| ! | CAAGAAAAGAAGAATTAAGT+TGG | + | chr1_2:41924111-41924130 | None:intergenic | 25.0% |
| !! | AAAGACACAAACAATTTTCA+AGG | + | chr1_2:41924258-41924277 | None:intergenic | 25.0% |
| !! | ATTGTTTGTGTCTTTTCAAT+TGG | - | chr1_2:41924263-41924282 | Msa0070920:intron | 25.0% |
| !!! | TCTTTTCAATTGGTTTGTAT+AGG | - | chr1_2:41924273-41924292 | Msa0070920:intron | 25.0% |
| !!! | TTCAAATGCAACTTTTGAAA+TGG | + | chr1_2:41924325-41924344 | None:intergenic | 25.0% |
| !!! | TCGTTTGAAGTTCTTTTTTT+TGG | - | chr1_2:41924782-41924801 | Msa0070920:intron | 25.0% |
| ! | TTTGCAATACTTGAAACTTT+GGG | + | chr1_2:41924825-41924844 | None:intergenic | 25.0% |
| !! | TTTTGCAATACTTGAAACTT+TGG | + | chr1_2:41924826-41924845 | None:intergenic | 25.0% |
| !! | AAGTTTCAAGTATTGCAAAA+TGG | - | chr1_2:41924826-41924845 | Msa0070920:intron | 25.0% |
| !!! | TTGCAATTTTGAAACTCTTA+AGG | + | chr1_2:41924902-41924921 | None:intergenic | 25.0% |
| ! | AGAGTTTCAAAATTGCAAAA+AGG | - | chr1_2:41924904-41924923 | Msa0070920:intron | 25.0% |
| ! | TTATGTATTTGGCAATGAAT+TGG | + | chr1_2:41925217-41925236 | None:intergenic | 25.0% |
| TATGCATAAGTGTGGAAATT+TGG | + | chr1_2:41918727-41918746 | None:intergenic | 30.0% | |
| !!! | CTCTTCAATTTTTGAGACTT+AGG | + | chr1_2:41919316-41919335 | None:intergenic | 30.0% |
| TGTTCATTCCCTTATATAAG+TGG | - | chr1_2:41919684-41919703 | Msa0070920:intron | 30.0% | |
| ! | GTTAACTGCCACTTATATAA+GGG | + | chr1_2:41919695-41919714 | None:intergenic | 30.0% |
| TTTCATGATCAACAGGAAAT+AGG | - | chr1_2:41919804-41919823 | Msa0070920:intron | 30.0% | |
| TTCATGATCAACAGGAAATA+GGG | - | chr1_2:41919805-41919824 | Msa0070920:intron | 30.0% | |
| !! | TTTTAAGGAAGGAAAGTGAA+AGG | + | chr1_2:41919851-41919870 | None:intergenic | 30.0% |
| ACGTTATTAATATGGACTTG+TGG | - | chr1_2:41920295-41920314 | Msa0070920:intron | 30.0% | |
| ! | CCATTATTTAAGATGTATGC+GGG | + | chr1_2:41920487-41920506 | None:intergenic | 30.0% |
| GCATACATCTTAAATAATGG+AGG | - | chr1_2:41920487-41920506 | Msa0070920:intron | 30.0% | |
| ! | GAAATGAGTATTGCTTTACA+AGG | + | chr1_2:41920586-41920605 | None:intergenic | 30.0% |
| GGTAGAAGCTACATAAATTA+TGG | - | chr1_2:41920916-41920935 | Msa0070920:intron | 30.0% | |
| ATGCATACTTTCATTGGATT+TGG | + | chr1_2:41920979-41920998 | None:intergenic | 30.0% | |
| TCATTGATGCATACTTTCAT+TGG | + | chr1_2:41920985-41921004 | None:intergenic | 30.0% | |
| !! | CAAGTTGATCTCTTAATCAT+GGG | - | chr1_2:41921082-41921101 | Msa0070920:intron | 30.0% |
| !!! | TTTGTTTTATGCATGGTTGA+TGG | - | chr1_2:41921198-41921217 | Msa0070920:intron | 30.0% |
| !! | TTTTAAAAGATTAGGGTTCG+GGG | + | chr1_2:41921364-41921383 | None:intergenic | 30.0% |
| TGAGTCAAAAGCCAATTAAA+TGG | - | chr1_2:41921413-41921432 | Msa0070920:intron | 30.0% | |
| GATGATCATAGCCATTTAAT+TGG | + | chr1_2:41921427-41921446 | None:intergenic | 30.0% | |
| ATTTACTAGTCATTCAAGCA+TGG | - | chr1_2:41921582-41921601 | Msa0070920:intron | 30.0% | |
| AAGATGACTGTCTTTATAAG+TGG | + | chr1_2:41921646-41921665 | None:intergenic | 30.0% | |
| GGAAAAAAAAATGGACATCT+TGG | - | chr1_2:41921903-41921922 | Msa0070920:intron | 30.0% | |
| !!! | AGGCATTTTGATTTTAGGTT+TGG | - | chr1_2:41921930-41921949 | Msa0070920:intron | 30.0% |
| GTTGCATTCAATTATTGGAA+CGG | + | chr1_2:41922174-41922193 | None:intergenic | 30.0% | |
| TTGACGTTGCATTCAATTAT+TGG | + | chr1_2:41922179-41922198 | None:intergenic | 30.0% | |
| ACATAAGCTTAATATGGAAC+GGG | + | chr1_2:41922319-41922338 | None:intergenic | 30.0% | |
| ! | GTAGTTAGAATTGATTCTAG+AGG | - | chr1_2:41922356-41922375 | Msa0070920:intron | 30.0% |
| !!! | ATTTTTTGTGTTTGAGAGAG+AGG | - | chr1_2:41922442-41922461 | Msa0070920:intron | 30.0% |
| TTGTGCACTCAAATGATTTA+TGG | - | chr1_2:41922705-41922724 | Msa0070920:intron | 30.0% | |
| ! | CAAAATGGTCAATGTTTTCT+TGG | + | chr1_2:41922950-41922969 | None:intergenic | 30.0% |
| ! | CAAGAAAACATTGACCATTT+TGG | - | chr1_2:41922948-41922967 | Msa0070920:CDS | 30.0% |
| ATCTTCTTTCACAAGAAACT+TGG | + | chr1_2:41922999-41923018 | None:intergenic | 30.0% | |
| TAATGATGTGAAGAATGAGT+GGG | + | chr1_2:41923051-41923070 | None:intergenic | 30.0% | |
| TTAATGATGTGAAGAATGAG+TGG | + | chr1_2:41923052-41923071 | None:intergenic | 30.0% | |
| !! | TGTCTTTAGGATTAATTCAG+AGG | + | chr1_2:41923094-41923113 | None:intergenic | 30.0% |
| CTGAATTAATCCTAAAGACA+AGG | - | chr1_2:41923094-41923113 | Msa0070920:intron | 30.0% | |
| AAGAAATAGACCTTGTCTTT+AGG | + | chr1_2:41923107-41923126 | None:intergenic | 30.0% | |
| TTGCTGGGAATAATCTTAAA+CGG | - | chr1_2:41923125-41923144 | Msa0070920:intron | 30.0% | |
| CCCCATATTGAAAAGATTTA+AGG | - | chr1_2:41923319-41923338 | Msa0070920:intron | 30.0% | |
| ! | TTGAAAAGATTTAAGGTTCG+GGG | - | chr1_2:41923326-41923345 | Msa0070920:intron | 30.0% |
| CCATCCAAATCAATAAAATG+TGG | + | chr1_2:41923501-41923520 | None:intergenic | 30.0% | |
| !!! | CCACATTTTATTGATTTGGA+TGG | - | chr1_2:41923498-41923517 | Msa0070920:intron | 30.0% |
| TGGCAAATGAGTATTTGTTT+GGG | - | chr1_2:41923643-41923662 | Msa0070920:intron | 30.0% | |
| AAAAAGACGTCACTTGATTT+AGG | - | chr1_2:41923739-41923758 | Msa0070920:intron | 30.0% | |
| TGAACTAGGATTAAACTAAC+GGG | - | chr1_2:41923834-41923853 | Msa0070920:intron | 30.0% | |
| TATTCTTATGCTCCTAGTTT+AGG | + | chr1_2:41923920-41923939 | None:intergenic | 30.0% | |
| TTAATCAGAGACAGTTCAAA+TGG | + | chr1_2:41924143-41924162 | None:intergenic | 30.0% | |
| ACCTGCAAAATTCATATACA+AGG | - | chr1_2:41924195-41924214 | Msa0070920:intron | 30.0% | |
| CCTGCAAAATTCATATACAA+GGG | - | chr1_2:41924196-41924215 | Msa0070920:intron | 30.0% | |
| ! | GATTAAAATGAGTTGAATGC+AGG | + | chr1_2:41924236-41924255 | None:intergenic | 30.0% |
| AAAAGACTAAAATGCCCTTA+GGG | + | chr1_2:41924369-41924388 | None:intergenic | 30.0% | |
| !!! | CTCAGATGCAAGTTTTAAAA+TGG | + | chr1_2:41924491-41924510 | None:intergenic | 30.0% |
| TTGCAATACTTGAAACTTTG+GGG | + | chr1_2:41924824-41924843 | None:intergenic | 30.0% | |
| ! | AAAGGATTGTAACTGTGTTT+TGG | + | chr1_2:41925070-41925089 | None:intergenic | 30.0% |
| !! | ATGGCTGAAAAAGTTTGTTA+GGG | + | chr1_2:41925123-41925142 | None:intergenic | 30.0% |
| ! | AATGGCTGAAAAAGTTTGTT+AGG | + | chr1_2:41925124-41925143 | None:intergenic | 30.0% |
| ATGAATTGGTGAATTTGTGA+TGG | + | chr1_2:41925203-41925222 | None:intergenic | 30.0% | |
| !!! | AAGCTTTTGATTTCGATTCT+TGG | + | chr1_2:41925256-41925275 | None:intergenic | 30.0% |
| TTCAAGCATGAATTCATCAT+TGG | - | chr1_2:41925360-41925379 | Msa0070920:CDS | 30.0% | |
| AGATAAAGAAAGAGAGAAGA+AGG | - | chr1_2:41925406-41925425 | Msa0070920:CDS | 30.0% | |
| GATAAAGAAAGAGAGAAGAA+GGG | - | chr1_2:41925407-41925426 | Msa0070920:CDS | 30.0% | |
| !!! | ACCAAACACCGATTTATTTT+CGG | - | chr1_2:41925469-41925488 | Msa0070920:CDS | 30.0% |
| CTTCGAAACCGAAAATAAAT+CGG | + | chr1_2:41925480-41925499 | None:intergenic | 30.0% | |
| AGAAAGGAGAATGAAGATGA+AGG | - | chr1_2:41918555-41918574 | Msa0070920:CDS | 35.0% | |
| AAGCTTGTATGCTCTTAAGT+TGG | - | chr1_2:41918606-41918625 | Msa0070920:CDS | 35.0% | |
| AACGTTGAAGAGGTTATCAA+GGG | + | chr1_2:41918632-41918651 | None:intergenic | 35.0% | |
| AAACGTTGAAGAGGTTATCA+AGG | + | chr1_2:41918633-41918652 | None:intergenic | 35.0% | |
| ! | TGATAACCTCTTCAACGTTT+TGG | - | chr1_2:41918633-41918652 | Msa0070920:CDS | 35.0% |
| TGGAGCAACATTTGAAAATG+AGG | - | chr1_2:41918672-41918691 | Msa0070920:CDS | 35.0% | |
| AGCAACATTTGAAAATGAGG+AGG | - | chr1_2:41918675-41918694 | Msa0070920:CDS | 35.0% | |
| GCAACATTTGAAAATGAGGA+GGG | - | chr1_2:41918676-41918695 | Msa0070920:CDS | 35.0% | |
| CAACATTTGAAAATGAGGAG+GGG | - | chr1_2:41918677-41918696 | Msa0070920:CDS | 35.0% | |
| TTATGCATACCCTATACCTA+TGG | - | chr1_2:41918738-41918757 | Msa0070920:intron | 35.0% | |
| TATGCATACCCTATACCTAT+GGG | - | chr1_2:41918739-41918758 | Msa0070920:intron | 35.0% | |
| ATATACTAACCAATACCAGC+TGG | + | chr1_2:41918766-41918785 | None:intergenic | 35.0% | |
| AGGAAGTAAGCAAAGAAAGT+TGG | + | chr1_2:41918803-41918822 | None:intergenic | 35.0% | |
| ATGATGTAACTTTGTAAGGC+TGG | - | chr1_2:41918927-41918946 | Msa0070920:intron | 35.0% | |
| GAGCAATTCTCCAAGAAAAT+TGG | + | chr1_2:41918966-41918985 | None:intergenic | 35.0% | |
| !!! | TCATGGTCAGCTATTTTGAT+GGG | - | chr1_2:41919411-41919430 | Msa0070920:intron | 35.0% |
| ! | CGTTAACTGCCACTTATATA+AGG | + | chr1_2:41919696-41919715 | None:intergenic | 35.0% |
| TGCACATTCCTTTATATCAG+CGG | + | chr1_2:41919750-41919769 | None:intergenic | 35.0% | |
| TCATGATCAACAGGAAATAG+GGG | - | chr1_2:41919806-41919825 | Msa0070920:intron | 35.0% | |
| AAAGGAAGATGATTGCTTCT+TGG | + | chr1_2:41919833-41919852 | None:intergenic | 35.0% | |
| CCCGCATACATCTTAAATAA+TGG | - | chr1_2:41920484-41920503 | Msa0070920:intron | 35.0% | |
| GTATGCATCAATGAAAATGC+AGG | - | chr1_2:41920991-41921010 | Msa0070920:intron | 35.0% | |
| ! | GCAGAAAGTGTGATTCTTAA+TGG | - | chr1_2:41921019-41921038 | Msa0070920:intron | 35.0% |
| ! | TGCAAGAGAAATGATTTGTC+AGG | - | chr1_2:41921045-41921064 | Msa0070920:intron | 35.0% |
| !! | GCAAGTTGATCTCTTAATCA+TGG | - | chr1_2:41921081-41921100 | Msa0070920:intron | 35.0% |
| !! | CACAAAGGGAATGCTTTTTA+TGG | + | chr1_2:41921333-41921352 | None:intergenic | 35.0% |
| TTTAAAAGATTAGGGTTCGG+GGG | + | chr1_2:41921363-41921382 | None:intergenic | 35.0% | |
| CTTTAGTGCATGAAGTCATT+GGG | - | chr1_2:41921539-41921558 | Msa0070920:intron | 35.0% | |
| !!! | GGACAAGGCATTTTGATTTT+AGG | - | chr1_2:41921925-41921944 | Msa0070920:intron | 35.0% |
| TGAGTTCAAGGTTTGAACTT+AGG | - | chr1_2:41922045-41922064 | Msa0070920:intron | 35.0% | |
| AATTCTAACTACTCCAAACG+TGG | + | chr1_2:41922348-41922367 | None:intergenic | 35.0% | |
| AAATAACACAACGGATGAGA+CGG | - | chr1_2:41922881-41922900 | Msa0070920:intron | 35.0% | |
| ! | AAAACATTGACCATTTTGGG+AGG | - | chr1_2:41922952-41922971 | Msa0070920:CDS | 35.0% |
| AATGATGTGAAGAATGAGTG+GGG | + | chr1_2:41923050-41923069 | None:intergenic | 35.0% | |
| ! | ATTTTCGAATTTGCATGTCC+TGG | - | chr1_2:41923174-41923193 | Msa0070920:intron | 35.0% |
| !!! | CTATTTGTCGCGTCATTTTT+TGG | - | chr1_2:41923202-41923221 | Msa0070920:intron | 35.0% |
| ! | TGAAAAGATTTAAGGTTCGG+GGG | - | chr1_2:41923327-41923346 | Msa0070920:intron | 35.0% |
| ! | TAGAGTACTACGGACATAAA+GGG | + | chr1_2:41923381-41923400 | None:intergenic | 35.0% |
| TTTATGTCCGTAGTACTCTA+CGG | - | chr1_2:41923381-41923400 | Msa0070920:intron | 35.0% | |
| ACAAATACTCATTTGCCACT+TGG | + | chr1_2:41923641-41923660 | None:intergenic | 35.0% | |
| GTGGCAAATGAGTATTTGTT+TGG | - | chr1_2:41923642-41923661 | Msa0070920:intron | 35.0% | |
| GAACTAGGATTAAACTAACG+GGG | - | chr1_2:41923835-41923854 | Msa0070920:intron | 35.0% | |
| ! | ATAAAAGCGTAGGTACCTTA+TGG | - | chr1_2:41923865-41923884 | Msa0070920:intron | 35.0% |
| TAAACCTACGATACATGCTA+TGG | - | chr1_2:41923984-41924003 | Msa0070920:intron | 35.0% | |
| ! | CCCTTGTATATGAATTTTGC+AGG | + | chr1_2:41924199-41924218 | None:intergenic | 35.0% |
| AAAGACTAAAATGCCCTTAG+GGG | + | chr1_2:41924368-41924387 | None:intergenic | 35.0% | |
| GAAAAGACTAAAATGCCCTT+AGG | + | chr1_2:41924370-41924389 | None:intergenic | 35.0% | |
| ! | GGTCATTTCACACGAAATTT+TGG | - | chr1_2:41924545-41924564 | Msa0070920:intron | 35.0% |
| AAGTACCTCATTTAAGCCAT+TGG | - | chr1_2:41924586-41924605 | Msa0070920:intron | 35.0% | |
| ATGAACCAATGGCTTAAATG+AGG | + | chr1_2:41924594-41924613 | None:intergenic | 35.0% | |
| AACGCACTAAAATGAACCAA+TGG | + | chr1_2:41924605-41924624 | None:intergenic | 35.0% | |
| AAAGAACTTGGACAAAAGTC+AGG | + | chr1_2:41924853-41924872 | None:intergenic | 35.0% | |
| !!! | CTTGGCTTATTTTGGACATT+TGG | + | chr1_2:41924931-41924950 | None:intergenic | 35.0% |
| CAAATGTCCAAAATAAGCCA+AGG | - | chr1_2:41924929-41924948 | Msa0070920:intron | 35.0% | |
| !! | AGTTTGTTAGGGTTCTGTTA+GGG | + | chr1_2:41925112-41925131 | None:intergenic | 35.0% |
| !! | AAGTTTGTTAGGGTTCTGTT+AGG | + | chr1_2:41925113-41925132 | None:intergenic | 35.0% |
| GAATTCATGCTTGAATTGCA+GGG | + | chr1_2:41925355-41925374 | None:intergenic | 35.0% | |
| TGAATTCATGCTTGAATTGC+AGG | + | chr1_2:41925356-41925375 | None:intergenic | 35.0% | |
| ! | ACCGAAAATAAATCGGTGTT+TGG | + | chr1_2:41925473-41925492 | None:intergenic | 35.0% |
| TACTTGGAGATTTGAACAAG+TGG | + | chr1_2:41925534-41925553 | None:intergenic | 35.0% | |
| !! | TGGAAGTGTTGATCAAGTGA+GGG | - | chr1_2:41918522-41918541 | Msa0070920:CDS | 40.0% |
| GAGAATGAAGATGAAGGTGA+TGG | - | chr1_2:41918561-41918580 | Msa0070920:CDS | 40.0% | |
| ! | AATGAAGATGAAGGTGATGG+TGG | - | chr1_2:41918564-41918583 | Msa0070920:CDS | 40.0% |
| !!! | CGTTTTGGCTACTGATACTA+TGG | - | chr1_2:41918648-41918667 | Msa0070920:CDS | 40.0% |
| TTGGCTACTGATACTATGGA+TGG | - | chr1_2:41918652-41918671 | Msa0070920:CDS | 40.0% | |
| ATTTGAAAATGAGGAGGGGA+TGG | - | chr1_2:41918681-41918700 | Msa0070920:intron | 40.0% | |
| GTATAGGGTATGCATAAGTG+TGG | + | chr1_2:41918735-41918754 | None:intergenic | 40.0% | |
| !!! | AAAAGTTTTGGGCTAGAGCT+CGG | + | chr1_2:41919107-41919126 | None:intergenic | 40.0% |
| !! | CTCATGGTCAGCTATTTTGA+TGG | - | chr1_2:41919410-41919429 | Msa0070920:intron | 40.0% |
| TGGGAATGAGCAAAAACAGA+TGG | - | chr1_2:41919430-41919449 | Msa0070920:intron | 40.0% | |
| GGGAATGAGCAAAAACAGAT+GGG | - | chr1_2:41919431-41919450 | Msa0070920:intron | 40.0% | |
| TATCCATCAACACCTGAAGT+TGG | - | chr1_2:41919507-41919526 | Msa0070920:intron | 40.0% | |
| ATCCATCAACACCTGAAGTT+GGG | - | chr1_2:41919508-41919527 | Msa0070920:intron | 40.0% | |
| TTCAAAGAATCCCCAACTTC+AGG | + | chr1_2:41919522-41919541 | None:intergenic | 40.0% | |
| !!! | AGCTGCTGATTTTTCTTGCT+GGG | + | chr1_2:41919550-41919569 | None:intergenic | 40.0% |
| !!! | TAGCTGCTGATTTTTCTTGC+TGG | + | chr1_2:41919551-41919570 | None:intergenic | 40.0% |
| GTTAACTGCCGCTGATATAA+AGG | - | chr1_2:41919739-41919758 | Msa0070920:intron | 40.0% | |
| CATGATCAACAGGAAATAGG+GGG | - | chr1_2:41919807-41919826 | Msa0070920:intron | 40.0% | |
| TTAGTAGGGAGGAAAGTGAA+AGG | + | chr1_2:41919881-41919900 | None:intergenic | 40.0% | |
| ACAAACATTATTCCCTCGTC+AGG | - | chr1_2:41920002-41920021 | Msa0070920:intron | 40.0% | |
| ! | TGATTTTACCATCCTGACGA+GGG | + | chr1_2:41920017-41920036 | None:intergenic | 40.0% |
| ! | TTGATTTTACCATCCTGACG+AGG | + | chr1_2:41920018-41920037 | None:intergenic | 40.0% |
| CGTCAGGATGGTAAAATCAA+CGG | - | chr1_2:41920018-41920037 | Msa0070920:intron | 40.0% | |
| TAGGGAACCAATCTCATGAT+TGG | - | chr1_2:41920149-41920168 | Msa0070920:intron | 40.0% | |
| TCGGTTACCAATCATGAGAT+TGG | + | chr1_2:41920159-41920178 | None:intergenic | 40.0% | |
| CATGGTATATATGCACGACT+AGG | + | chr1_2:41920325-41920344 | None:intergenic | 40.0% | |
| GTGCATATATACCATGTCCT+TGG | - | chr1_2:41920329-41920348 | Msa0070920:intron | 40.0% | |
| ATTCAGATGCTCTTTAGCCA+AGG | + | chr1_2:41920349-41920368 | None:intergenic | 40.0% | |
| !!! | CTTACCTTTTGAGTTTGCCA+AGG | + | chr1_2:41921117-41921136 | None:intergenic | 40.0% |
| TGGCAAACTCAAAAGGTAAG+TGG | - | chr1_2:41921117-41921136 | Msa0070920:intron | 40.0% | |
| CCAATGACTTCATGCACTAA+AGG | + | chr1_2:41921541-41921560 | None:intergenic | 40.0% | |
| CCTTTAGTGCATGAAGTCAT+TGG | - | chr1_2:41921538-41921557 | Msa0070920:intron | 40.0% | |
| GAAGTCATTGGGTAACACAT+AGG | - | chr1_2:41921550-41921569 | Msa0070920:intron | 40.0% | |
| ! | GACTTTTATTGAGCTAGGCT+TGG | + | chr1_2:41921622-41921641 | None:intergenic | 40.0% |
| ! | GTGGAGACTTTTATTGAGCT+AGG | + | chr1_2:41921627-41921646 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGGGATTGGTTT+AGG | + | chr1_2:41921756-41921775 | None:intergenic | 40.0% |
| TATGGTCTTCAGTCTTCACA+TGG | + | chr1_2:41921787-41921806 | None:intergenic | 40.0% | |
| TGTGAAGACTGAAGACCATA+AGG | - | chr1_2:41921787-41921806 | Msa0070920:intron | 40.0% | |
| AATTGCAGAGAGCTCAACAT+TGG | - | chr1_2:41921810-41921829 | Msa0070920:intron | 40.0% | |
| !! | TTCTTTAGTTGCTGGCTTCT+TGG | + | chr1_2:41921867-41921886 | None:intergenic | 40.0% |
| AGCCAGCAACTAAAGAAACA+AGG | - | chr1_2:41921870-41921889 | Msa0070920:intron | 40.0% | |
| !! | AGCCTTGTTTCTTTAGTTGC+TGG | + | chr1_2:41921875-41921894 | None:intergenic | 40.0% |
| AAGAAACAAGGCTTGATACG+AGG | - | chr1_2:41921882-41921901 | Msa0070920:intron | 40.0% | |
| AAAATGGACATCTTGGGACA+AGG | - | chr1_2:41921910-41921929 | Msa0070920:intron | 40.0% | |
| CAATTATTGGAACGGTCCAA+GGG | + | chr1_2:41922166-41922185 | None:intergenic | 40.0% | |
| TCAATTATTGGAACGGTCCA+AGG | + | chr1_2:41922167-41922186 | None:intergenic | 40.0% | |
| CTTATGTTTGCTTCCACGTT+TGG | - | chr1_2:41922332-41922351 | Msa0070920:intron | 40.0% | |
| CTATCCCACAATAAAAGCCT+CGG | + | chr1_2:41922514-41922533 | None:intergenic | 40.0% | |
| ! | AGACAAGGTCTATTTCTTGC+TGG | - | chr1_2:41923109-41923128 | Msa0070920:intron | 40.0% |
| ! | GACAAGGTCTATTTCTTGCT+GGG | - | chr1_2:41923110-41923129 | Msa0070920:intron | 40.0% |
| !!! | GCGTCATTTTTTGGAGATCA+AGG | - | chr1_2:41923211-41923230 | Msa0070920:intron | 40.0% |
| !! | TTCGGGGGTTAGTTACATAA+AGG | - | chr1_2:41923342-41923361 | Msa0070920:intron | 40.0% |
| !! | TCGGGGGTTAGTTACATAAA+GGG | - | chr1_2:41923343-41923362 | Msa0070920:intron | 40.0% |
| !! | GGGTTAGTTACATAAAGGGA+AGG | - | chr1_2:41923347-41923366 | Msa0070920:intron | 40.0% |
| ! | GTAGAGTACTACGGACATAA+AGG | + | chr1_2:41923382-41923401 | None:intergenic | 40.0% |
| TTATGTCCGTAGTACTCTAC+GGG | - | chr1_2:41923382-41923401 | Msa0070920:intron | 40.0% | |
| !! | TACGTGATTTTGATCCCTCA+CGG | + | chr1_2:41923545-41923564 | None:intergenic | 40.0% |
| GATCAAAATCACGTAGTTCG+TGG | - | chr1_2:41923550-41923569 | Msa0070920:intron | 40.0% | |
| ! | CGTCACTTGATTTAGGATCA+AGG | - | chr1_2:41923746-41923765 | Msa0070920:intron | 40.0% |
| ! | GGGCAGAAAAATAAAAGCGT+AGG | - | chr1_2:41923855-41923874 | Msa0070920:intron | 40.0% |
| AAGGACCTTCTACCTAAACT+AGG | - | chr1_2:41923905-41923924 | Msa0070920:intron | 40.0% | |
| ATGCTCCTAGTTTAGGTAGA+AGG | + | chr1_2:41923913-41923932 | None:intergenic | 40.0% | |
| !! | TTTTTAGTCGTTTTAGCCCC+AGG | - | chr1_2:41924514-41924533 | Msa0070920:CDS | 40.0% |
| !! | TTTTAGTCGTTTTAGCCCCA+GGG | - | chr1_2:41924515-41924534 | Msa0070920:CDS | 40.0% |
| CAACTTTCTACTGGGTTACA+AGG | - | chr1_2:41924981-41925000 | Msa0070920:intron | 40.0% | |
| !!! | GTAACTGTGTTTTGGTGAGT+TGG | + | chr1_2:41925062-41925081 | None:intergenic | 40.0% |
| ! | GTTTGTTACGGTGGTTTCAA+TGG | + | chr1_2:41925142-41925161 | None:intergenic | 40.0% |
| !! | GTGCGATTTGGTGTTTGTTA+CGG | + | chr1_2:41925154-41925173 | None:intergenic | 40.0% |
| GGTTCGAATTTGTGAGGAAT+TGG | + | chr1_2:41925176-41925195 | None:intergenic | 40.0% | |
| TGGTGAATTTGTGATGGTTC+TGG | + | chr1_2:41925197-41925216 | None:intergenic | 40.0% | |
| TCTTTATCTCTGTGATCGCA+TGG | + | chr1_2:41925395-41925414 | None:intergenic | 40.0% | |
| !! | GTGGAAGTGTTGATCAAGTG+AGG | - | chr1_2:41918521-41918540 | Msa0070920:CDS | 45.0% |
| !! | GGAAGTGTTGATCAAGTGAG+GGG | - | chr1_2:41918523-41918542 | Msa0070920:CDS | 45.0% |
| GTGGCAATAGATGAGAGTGA+TGG | - | chr1_2:41918583-41918602 | Msa0070920:CDS | 45.0% | |
| CAGTAGCCAAAACGTTGAAG+AGG | + | chr1_2:41918642-41918661 | None:intergenic | 45.0% | |
| CTGGGATGAGAGAAAACAGA+TGG | + | chr1_2:41918994-41919013 | None:intergenic | 45.0% | |
| CGCATGTGTATTTCTCAGCT+GGG | + | chr1_2:41919012-41919031 | None:intergenic | 45.0% | |
| ACGCATGTGTATTTCTCAGC+TGG | + | chr1_2:41919013-41919032 | None:intergenic | 45.0% | |
| TGAGAATACAACTGCGTGCA+CGG | - | chr1_2:41919047-41919066 | Msa0070920:intron | 45.0% | |
| !!! | AAAGTTTTGGGCTAGAGCTC+GGG | + | chr1_2:41919106-41919125 | None:intergenic | 45.0% |
| ! | CCTCTTCACTCTTTGGGTTT+GGG | + | chr1_2:41919293-41919312 | None:intergenic | 45.0% |
| CTTAGGCCTCTTCACTCTTT+GGG | + | chr1_2:41919299-41919318 | None:intergenic | 45.0% | |
| ACTTAGGCCTCTTCACTCTT+TGG | + | chr1_2:41919300-41919319 | None:intergenic | 45.0% | |
| TCCATCAACACCTGAAGTTG+GGG | - | chr1_2:41919509-41919528 | Msa0070920:intron | 45.0% | |
| AATCAGCAGCTATTGCCTCA+CGG | - | chr1_2:41919559-41919578 | Msa0070920:intron | 45.0% | |
| GCAAATGTGCAAGGATAAGC+AGG | - | chr1_2:41919587-41919606 | Msa0070920:intron | 45.0% | |
| ACATTATTCCCTCGTCAGGA+TGG | - | chr1_2:41920006-41920025 | Msa0070920:intron | 45.0% | |
| ATGCTCTTTAGCCAAGGACA+TGG | + | chr1_2:41920343-41920362 | None:intergenic | 45.0% | |
| TGCCACGTTAATTGTCATGC+AGG | - | chr1_2:41920513-41920532 | Msa0070920:intron | 45.0% | |
| GACCTGCATGACAATTAACG+TGG | + | chr1_2:41920518-41920537 | None:intergenic | 45.0% | |
| TAATTGTCATGCAGGTCGTG+CGG | - | chr1_2:41920521-41920540 | Msa0070920:intron | 45.0% | |
| GTGCATTTGTCGTGCACAAT+AGG | - | chr1_2:41920544-41920563 | Msa0070920:intron | 45.0% | |
| CTCTTAATCATGGGTAGTCG+TGG | - | chr1_2:41921091-41921110 | Msa0070920:intron | 45.0% | |
| ! | TTTGGTGGCAGAGCATTTCT+TGG | - | chr1_2:41921238-41921257 | Msa0070920:intron | 45.0% |
| GGTGGCTTCACAATGAGAAT+AGG | + | chr1_2:41921301-41921320 | None:intergenic | 45.0% | |
| ! | TTTTTATGGTGCTCCTCTGG+TGG | + | chr1_2:41921319-41921338 | None:intergenic | 45.0% |
| !! | TGCTTTTTATGGTGCTCCTC+TGG | + | chr1_2:41921322-41921341 | None:intergenic | 45.0% |
| !! | TCGGGGGTTAGTTACACAAA+GGG | + | chr1_2:41921347-41921366 | None:intergenic | 45.0% |
| !! | TTCGGGGGTTAGTTACACAA+AGG | + | chr1_2:41921348-41921367 | None:intergenic | 45.0% |
| !!! | TGGGAAGTTGGTTTTGGGAT+TGG | + | chr1_2:41921762-41921781 | None:intergenic | 45.0% |
| !!! | TGGTCTGGGAAGTTGGTTTT+GGG | + | chr1_2:41921767-41921786 | None:intergenic | 45.0% |
| !! | ATGGTCTGGGAAGTTGGTTT+TGG | + | chr1_2:41921768-41921787 | None:intergenic | 45.0% |
| CTTCAGTCTTCACATGGTCT+GGG | + | chr1_2:41921781-41921800 | None:intergenic | 45.0% | |
| TCTTCAGTCTTCACATGGTC+TGG | + | chr1_2:41921782-41921801 | None:intergenic | 45.0% | |
| GAGCTCTCTGCAATTCCTTA+TGG | + | chr1_2:41921805-41921824 | None:intergenic | 45.0% | |
| AGAGAGCTCAACATTGGTGT+TGG | - | chr1_2:41921816-41921835 | Msa0070920:intron | 45.0% | |
| GGGTCAATCAGTCCAACATA+AGG | + | chr1_2:41922146-41922165 | None:intergenic | 45.0% | |
| ATGTTGGACTGATTGACCCT+TGG | - | chr1_2:41922147-41922166 | Msa0070920:intron | 45.0% | |
| ! | CGAGGCTTTTATTGTGGGAT+AGG | - | chr1_2:41922512-41922531 | Msa0070920:intron | 45.0% |
| !! | AGACGGTGAACATTGATTCG+TGG | - | chr1_2:41922898-41922917 | Msa0070920:intron | 45.0% |
| !! | ACATTGACCATTTTGGGAGG+TGG | - | chr1_2:41922955-41922974 | Msa0070920:CDS | 45.0% |
| !! | CATTGACCATTTTGGGAGGT+GGG | - | chr1_2:41922956-41922975 | Msa0070920:CDS | 45.0% |
| CTTAAACCCACCTCCCAAAA+TGG | + | chr1_2:41922965-41922984 | None:intergenic | 45.0% | |
| TGGGGTCGAAGTCTTTGTAA+AGG | + | chr1_2:41923032-41923051 | None:intergenic | 45.0% | |
| ACGCGACAAATAGTAAGACC+AGG | + | chr1_2:41923195-41923214 | None:intergenic | 45.0% | |
| !! | ACGTGATTTTGATCCCTCAC+GGG | + | chr1_2:41923544-41923563 | None:intergenic | 45.0% |
| AAAGCGTAGGTACCTTATGG+TGG | - | chr1_2:41923868-41923887 | Msa0070920:intron | 45.0% | |
| GTTTAGGTAGAAGGTCCTTG+TGG | + | chr1_2:41923904-41923923 | None:intergenic | 45.0% | |
| CAGACCATAGCATGTATCGT+AGG | + | chr1_2:41923991-41924010 | None:intergenic | 45.0% | |
| ! | TTGAGTCAGTTTTGCCCCTA+AGG | - | chr1_2:41924351-41924370 | Msa0070920:intron | 45.0% |
| ! | TGAGTCAGTTTTGCCCCTAA+GGG | - | chr1_2:41924352-41924371 | Msa0070920:intron | 45.0% |
| !! | TTTAGTCGTTTTAGCCCCAG+GGG | - | chr1_2:41924516-41924535 | Msa0070920:CDS | 45.0% |
| AAATGACCAAAATGCCCCTG+GGG | + | chr1_2:41924533-41924552 | None:intergenic | 45.0% | |
| GAAATGACCAAAATGCCCCT+GGG | + | chr1_2:41924534-41924553 | None:intergenic | 45.0% | |
| TGAAATGACCAAAATGCCCC+TGG | + | chr1_2:41924535-41924554 | None:intergenic | 45.0% | |
| !! | CACGAAATTTTGGCAGAGAG+AGG | - | chr1_2:41924555-41924574 | Msa0070920:intron | 45.0% |
| ! | GATTCGGCCTTGGCTTATTT+TGG | + | chr1_2:41924939-41924958 | None:intergenic | 45.0% |
| GGACTGGACTCTAACTGATT+CGG | + | chr1_2:41924955-41924974 | None:intergenic | 45.0% | |
| AATCAGTTAGAGTCCAGTCC+AGG | - | chr1_2:41924955-41924974 | Msa0070920:intron | 45.0% | |
| TAGAAAGTTGACACCTGGAC+TGG | + | chr1_2:41924971-41924990 | None:intergenic | 45.0% | |
| TCCAGGTGTCAACTTTCTAC+TGG | - | chr1_2:41924972-41924991 | Msa0070920:intron | 45.0% | |
| CCAGGTGTCAACTTTCTACT+GGG | - | chr1_2:41924973-41924992 | Msa0070920:intron | 45.0% | |
| TTGTTAGGGTTCTGTTAGGG+TGG | + | chr1_2:41925109-41925128 | None:intergenic | 45.0% | |
| !! | CGATTTGGTGTTTGTTACGG+TGG | + | chr1_2:41925151-41925170 | None:intergenic | 45.0% |
| TGTGAGGAATTGGTGCGATT+TGG | + | chr1_2:41925166-41925185 | None:intergenic | 45.0% | |
| !! | GGTTCTGGTTCGAATTTGTG+AGG | + | chr1_2:41925182-41925201 | None:intergenic | 45.0% |
| GGTCTTCTTCTTCTTCGAAC+TGG | + | chr1_2:41925452-41925471 | None:intergenic | 45.0% | |
| !! | TTGCGAGCTTTTGATTCCTC+TGG | + | chr1_2:41925507-41925526 | None:intergenic | 45.0% |
| AGAGGAATCAAAAGCTCGCA+AGG | - | chr1_2:41925506-41925525 | Msa0070920:CDS | 45.0% | |
| !! | ATATATATAAGAAATTTATA+GGG | + | chr1_2:41919171-41919190 | None:intergenic | 5.0% |
| !! | AATATATATAAGAAATTTAT+AGG | + | chr1_2:41919172-41919191 | None:intergenic | 5.0% |
| !!! | TTCTTATATATATTTTTTTT+TGG | - | chr1_2:41919178-41919197 | Msa0070920:intron | 5.0% |
| !!! | TCTTATATATATTTTTTTTT+GGG | - | chr1_2:41919179-41919198 | Msa0070920:intron | 5.0% |
| !!! | ATTTAATTTTTTTAAGAAAA+GGG | - | chr1_2:41923279-41923298 | Msa0070920:intron | 5.0% |
| !!! | TTTTTTAATTTAAAAGAAAA+TGG | - | chr1_2:41923666-41923685 | Msa0070920:intron | 5.0% |
| !! | AAATAAAATTGAATTAAAAT+TGG | + | chr1_2:41924671-41924690 | None:intergenic | 5.0% |
| !! | AGTGTTGATCAAGTGAGGGG+AGG | - | chr1_2:41918526-41918545 | Msa0070920:CDS | 50.0% |
| CAGCTGGTCCCATAGGTATA+GGG | + | chr1_2:41918750-41918769 | None:intergenic | 50.0% | |
| GAGAATACAACTGCGTGCAC+GGG | - | chr1_2:41919048-41919067 | Msa0070920:intron | 50.0% | |
| CCCAAACCCAAAGAGTGAAG+AGG | - | chr1_2:41919290-41919309 | Msa0070920:intron | 50.0% | |
| ! | GCCTCTTCACTCTTTGGGTT+TGG | + | chr1_2:41919294-41919313 | None:intergenic | 50.0% |
| TGCATGCGCGAGTTAACTCA+TGG | - | chr1_2:41919394-41919413 | Msa0070920:intron | 50.0% | |
| !! | TCCCCAACTTCAGGTGTTGA+TGG | + | chr1_2:41919513-41919532 | None:intergenic | 50.0% |
| ATCAGCAGCTATTGCCTCAC+GGG | - | chr1_2:41919560-41919579 | Msa0070920:intron | 50.0% | |
| ACGGGCTTTGCAAATGTGCA+AGG | - | chr1_2:41919578-41919597 | Msa0070920:intron | 50.0% | |
| TGTGCAAGGATAAGCAGGTG+CGG | - | chr1_2:41919592-41919611 | Msa0070920:intron | 50.0% | |
| CGGGTAGAATACATGTCGTG+CGG | + | chr1_2:41920468-41920487 | None:intergenic | 50.0% | |
| AATTGTCATGCAGGTCGTGC+GGG | - | chr1_2:41920522-41920541 | Msa0070920:intron | 50.0% | |
| ! | GTGGCCTTGGCAAACTCAAA+AGG | - | chr1_2:41921110-41921129 | Msa0070920:intron | 50.0% |
| TCTCATTGTGAAGCCACCAG+AGG | - | chr1_2:41921303-41921322 | Msa0070920:intron | 50.0% | |
| CTTCACATGGTCTGGGAAGT+TGG | + | chr1_2:41921774-41921793 | None:intergenic | 50.0% | |
| ! | GAGGTTCCCGTAGAGTACTA+CGG | + | chr1_2:41923391-41923410 | None:intergenic | 50.0% |
| AGTACTCTACGGGAACCTCT+TGG | - | chr1_2:41923392-41923411 | Msa0070920:intron | 50.0% | |
| ! | TAGGTACCTTATGGTGGCGT+TGG | - | chr1_2:41923874-41923893 | Msa0070920:intron | 50.0% |
| TAGGTAGAAGGTCCTTGTGG+TGG | + | chr1_2:41923901-41923920 | None:intergenic | 50.0% | |
| !!! | TTTTAGCCCCAGGGGCATTT+TGG | - | chr1_2:41924524-41924543 | Msa0070920:intron | 50.0% |
| !! | GACTCTAACTGATTCGGCCT+TGG | + | chr1_2:41924949-41924968 | None:intergenic | 50.0% |
| CCCAGTAGAAAGTTGACACC+TGG | + | chr1_2:41924976-41924995 | None:intergenic | 50.0% | |
| TCGGTTTCGAAGCTTACCAG+AGG | - | chr1_2:41925488-41925507 | Msa0070920:CDS | 50.0% | |
| ! | TGAGGGGAGGTGCAGAAGAA+AGG | - | chr1_2:41918539-41918558 | Msa0070920:CDS | 55.0% |
| CCAGCTGGTCCCATAGGTAT+AGG | + | chr1_2:41918751-41918770 | None:intergenic | 55.0% | |
| CCTATACCTATGGGACCAGC+TGG | - | chr1_2:41918748-41918767 | Msa0070920:intron | 55.0% | |
| CCAATACCAGCTGGTCCCAT+AGG | + | chr1_2:41918757-41918776 | None:intergenic | 55.0% | |
| CCTATGGGACCAGCTGGTAT+TGG | - | chr1_2:41918754-41918773 | Msa0070920:intron | 55.0% | |
| AATACAACTGCGTGCACGGG+CGG | - | chr1_2:41919051-41919070 | Msa0070920:intron | 55.0% | |
| ! | ATTCAAGGCCCAGCTAGCCT+GGG | - | chr1_2:41919074-41919093 | Msa0070920:intron | 55.0% |
| TTAACTCGCGCATGCAGTGG+CGG | + | chr1_2:41919390-41919409 | None:intergenic | 55.0% | |
| GAGTTAACTCGCGCATGCAG+TGG | + | chr1_2:41919393-41919412 | None:intergenic | 55.0% | |
| GCACATTTGCAAAGCCCGTG+AGG | + | chr1_2:41919577-41919596 | None:intergenic | 55.0% | |
| AAGCACGACGTCAACTGTCG+TGG | - | chr1_2:41920439-41920458 | Msa0070920:intron | 55.0% | |
| ATCATGGGTAGTCGTGGCCT+TGG | - | chr1_2:41921097-41921116 | Msa0070920:intron | 55.0% | |
| CTTTGCCTACGTACCCGTGA+GGG | - | chr1_2:41923528-41923547 | Msa0070920:intron | 55.0% | |
| TTGATCCCTCACGGGTACGT+AGG | + | chr1_2:41923536-41923555 | None:intergenic | 55.0% | |
| AGGTGCATGTGTGCGTGTGT+GGG | + | chr1_2:41923952-41923971 | None:intergenic | 55.0% | |
| TAGGTGCATGTGTGCGTGTG+TGG | + | chr1_2:41923953-41923972 | None:intergenic | 55.0% | |
| ! | GTGAGTTGGCAACGAGTGTG+TGG | + | chr1_2:41925048-41925067 | None:intergenic | 55.0% |
| GATTCAAGGCCCAGCTAGCC+TGG | - | chr1_2:41919073-41919092 | Msa0070920:intron | 60.0% | |
| CCTCACGGGTACGTAGGCAA+AGG | + | chr1_2:41923530-41923549 | None:intergenic | 60.0% | |
| CCTTTGCCTACGTACCCGTG+AGG | - | chr1_2:41923527-41923546 | Msa0070920:intron | 60.0% | |
| GGTGGTCCAACGCCACCATA+AGG | + | chr1_2:41923883-41923902 | None:intergenic | 60.0% | |
| TTCTGTTAGGGTGGCGCGTG+AGG | + | chr1_2:41925100-41925119 | None:intergenic | 60.0% | |
| ! | TGCGTGCACGGGCGGATTCA+AGG | - | chr1_2:41919059-41919078 | Msa0070920:intron | 65.0% |
| ! | GGTGGCGTTGGACCACCACA+AGG | - | chr1_2:41923886-41923905 | Msa0070920:intron | 65.0% |
| ! | CAAGGCCCAGCTAGCCTGGG+CGG | - | chr1_2:41919077-41919096 | Msa0070920:intron | 70.0% |
| ! | GGCAACCGCCCAGGCTAGCT+GGG | + | chr1_2:41919085-41919104 | None:intergenic | 70.0% |
| TAGAGCTCGGGCAACCGCCC+AGG | + | chr1_2:41919094-41919113 | None:intergenic | 70.0% | |
| GGCGCGTGAGGCGCGTGAAA+AGG | + | chr1_2:41925088-41925107 | None:intergenic | 70.0% | |
| GGGCAACCGCCCAGGCTAGC+TGG | + | chr1_2:41919086-41919105 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 41918508 | 41925554 | 41918508 | ID=Msa0070920;Name=Msa0070920 |
| chr1_2 | mRNA | 41918508 | 41925554 | 41918508 | ID=Msa0070920-mRNA-1;Parent=Msa0070920;Name=Msa0070920-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.8|1|1|5|0|253 |
| chr1_2 | exon | 41925287 | 41925554 | 41925287 | ID=Msa0070920-mRNA-1:exon:12832;Parent=Msa0070920-mRNA-1 |
| chr1_2 | exon | 41924454 | 41924536 | 41924454 | ID=Msa0070920-mRNA-1:exon:12831;Parent=Msa0070920-mRNA-1 |
| chr1_2 | exon | 41922931 | 41923049 | 41922931 | ID=Msa0070920-mRNA-1:exon:12830;Parent=Msa0070920-mRNA-1 |
| chr1_2 | exon | 41922711 | 41922813 | 41922711 | ID=Msa0070920-mRNA-1:exon:12829;Parent=Msa0070920-mRNA-1 |
| chr1_2 | exon | 41918508 | 41918696 | 41918508 | ID=Msa0070920-mRNA-1:exon:12828;Parent=Msa0070920-mRNA-1 |
| chr1_2 | CDS | 41925287 | 41925554 | 41925287 | ID=Msa0070920-mRNA-1:cds;Parent=Msa0070920-mRNA-1 |
| chr1_2 | CDS | 41924454 | 41924536 | 41924454 | ID=Msa0070920-mRNA-1:cds;Parent=Msa0070920-mRNA-1 |
| chr1_2 | CDS | 41922931 | 41923049 | 41922931 | ID=Msa0070920-mRNA-1:cds;Parent=Msa0070920-mRNA-1 |
| chr1_2 | CDS | 41922711 | 41922813 | 41922711 | ID=Msa0070920-mRNA-1:cds;Parent=Msa0070920-mRNA-1 |
| chr1_2 | CDS | 41918508 | 41918696 | 41918508 | ID=Msa0070920-mRNA-1:cds;Parent=Msa0070920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
