Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023000 | XP_013467750.1 | 93.194 | 191 | 12 | 1 | 1 | 191 | 1 | 190 | 1.64e-127 | 366 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023000 | sp|Q8LGG8|USPAL_ARATH | 25.595 | 168 | 104 | 3 | 24 | 182 | 7 | 162 | 2.87e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023000 | A0A072VJ06 | 93.194 | 191 | 12 | 1 | 1 | 191 | 1 | 190 | 7.82e-128 | 366 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0023000 | 0.835869 | 1.304852e-56 | -8.615850e-47 |
| Msa0011960 | Msa0023000 | 0.825575 | 4.350150e-54 | -8.615850e-47 |
| Msa0013050 | Msa0023000 | -0.834224 | 3.390926e-56 | -8.615850e-47 |
| Msa0023000 | Msa0023010 | 0.805480 | 1.307936e-49 | -8.615850e-47 |
| Msa0023000 | Msa0027260 | 0.819506 | 1.120375e-52 | -8.615850e-47 |
| Msa0023000 | Msa0030380 | 0.803687 | 3.094786e-49 | -8.615850e-47 |
| Msa0023000 | Msa0032580 | 0.826559 | 2.538818e-54 | -8.615850e-47 |
| Msa0023000 | Msa0033110 | 0.811550 | 6.618105e-51 | -8.615850e-47 |
| Msa0023000 | Msa0033260 | 0.806533 | 7.853568e-50 | -8.615850e-47 |
| Msa0023000 | Msa0054750 | 0.813297 | 2.748564e-51 | -8.615850e-47 |
| Msa0023000 | Msa0055180 | 0.839308 | 1.712772e-57 | -8.615850e-47 |
| Msa0023000 | Msa0058300 | 0.850327 | 1.824839e-60 | -8.615850e-47 |
| Msa0023000 | Msa0060770 | 0.803928 | 2.758531e-49 | -8.615850e-47 |
| Msa0023000 | Msa0061080 | 0.802903 | 4.498758e-49 | -8.615850e-47 |
| Msa0023000 | Msa0065950 | 0.830724 | 2.499383e-55 | -8.615850e-47 |
| Msa0023000 | Msa0070880 | 0.858659 | 7.079103e-63 | -8.615850e-47 |
| Msa0023000 | Msa0070920 | 0.821406 | 4.106138e-53 | -8.615850e-47 |
| Msa0023000 | Msa0075500 | 0.804008 | 2.655040e-49 | -8.615850e-47 |
| Msa0023000 | Msa0084940 | 0.841610 | 4.281863e-58 | -8.615850e-47 |
| Msa0023000 | Msa0091410 | 0.807487 | 4.935362e-50 | -8.615850e-47 |
| Msa0023000 | Msa0091570 | 0.828737 | 7.611257e-55 | -8.615850e-47 |
| Msa0023000 | Msa0100740 | 0.842109 | 3.160974e-58 | -8.615850e-47 |
| Msa0023000 | Msa0105620 | 0.808583 | 2.884396e-50 | -8.615850e-47 |
| Msa0023000 | Msa0115270 | 0.821659 | 3.589336e-53 | -8.615850e-47 |
| Msa0023000 | Msa0115390 | 0.822623 | 2.145260e-53 | -8.615850e-47 |
| Msa0023000 | Msa0118540 | 0.806862 | 6.693830e-50 | -8.615850e-47 |
| Msa0023000 | Msa0118780 | 0.949970 | 4.308414e-108 | -8.615850e-47 |
| Msa0023000 | Msa0118810 | 0.823116 | 1.647128e-53 | -8.615850e-47 |
| Msa0023000 | Msa0128860 | 0.808888 | 2.481757e-50 | -8.615850e-47 |
| Msa0023000 | Msa0138630 | 0.821405 | 4.108849e-53 | -8.615850e-47 |
| Msa0023000 | Msa0140110 | 0.813848 | 2.078984e-51 | -8.615850e-47 |
| Msa0023000 | Msa0140650 | 0.805883 | 1.076453e-49 | -8.615850e-47 |
| Msa0023000 | Msa0145160 | 0.805627 | 1.218478e-49 | -8.615850e-47 |
| Msa0023000 | Msa0145730 | 0.835007 | 2.155437e-56 | -8.615850e-47 |
| Msa0023000 | Msa0159170 | 0.825137 | 5.523682e-54 | -8.615850e-47 |
| Msa0023000 | Msa0160550 | 0.807318 | 5.358796e-50 | -8.615850e-47 |
| Msa0023000 | Msa0162100 | 0.905364 | 4.640987e-80 | -8.615850e-47 |
| Msa0023000 | Msa0162130 | 0.892495 | 1.506454e-74 | -8.615850e-47 |
| Msa0023000 | Msa0162220 | 0.867407 | 1.400456e-65 | -8.615850e-47 |
| Msa0023000 | Msa0162230 | 0.830608 | 2.668314e-55 | -8.615850e-47 |
| Msa0023000 | Msa0162240 | 0.830619 | 2.652611e-55 | -8.615850e-47 |
| Msa0023000 | Msa0162770 | -0.810230 | 1.278079e-50 | -8.615850e-47 |
| Msa0023000 | Msa0172970 | 0.825334 | 4.960948e-54 | -8.615850e-47 |
| Msa0023000 | Msa0173740 | 0.804273 | 2.338064e-49 | -8.615850e-47 |
| Msa0023000 | Msa0174730 | 0.809458 | 1.873287e-50 | -8.615850e-47 |
| Msa0023000 | Msa0187120 | 0.801237 | 9.897331e-49 | -8.615850e-47 |
| Msa0023000 | Msa0189520 | 0.867051 | 1.819863e-65 | -8.615850e-47 |
| Msa0023000 | Msa0190120 | 0.827890 | 1.218190e-54 | -8.615850e-47 |
| Msa0023000 | Msa0194480 | 0.841083 | 5.889914e-58 | -8.615850e-47 |
| Msa0023000 | Msa0199690 | 0.800405 | 1.463379e-48 | -8.615850e-47 |
| Msa0023000 | Msa0208220 | 0.807199 | 5.679429e-50 | -8.615850e-47 |
| Msa0023000 | Msa0208350 | 0.815728 | 7.968655e-52 | -8.615850e-47 |
| Msa0023000 | Msa0220720 | 0.819815 | 9.524453e-53 | -8.615850e-47 |
| Msa0023000 | Msa0228070 | 0.831390 | 1.715136e-55 | -8.615850e-47 |
| Msa0023000 | Msa0231980 | 0.812027 | 5.211907e-51 | -8.615850e-47 |
| Msa0023000 | Msa0232050 | 0.820109 | 8.160046e-53 | -8.615850e-47 |
| Msa0023000 | Msa0236270 | 0.814359 | 1.603564e-51 | -8.615850e-47 |
| Msa0023000 | Msa0255080 | 0.802005 | 6.887083e-49 | -8.615850e-47 |
| Msa0023000 | Msa0256330 | 0.838869 | 2.225836e-57 | -8.615850e-47 |
| Msa0023000 | Msa0261550 | 0.827193 | 1.790616e-54 | -8.615850e-47 |
| Msa0023000 | Msa0262050 | 0.803640 | 3.165127e-49 | -8.615850e-47 |
| Msa0023000 | Msa0262310 | 0.821717 | 3.480720e-53 | -8.615850e-47 |
| Msa0023000 | Msa0271360 | 0.852418 | 4.676078e-61 | -8.615850e-47 |
| Msa0023000 | Msa0271890 | 0.838600 | 2.611146e-57 | -8.615850e-47 |
| Msa0023000 | Msa0275000 | 0.800441 | 1.439107e-48 | -8.615850e-47 |
| Msa0023000 | Msa0295330 | 0.841868 | 3.659227e-58 | -8.615850e-47 |
| Msa0023000 | Msa0298700 | 0.832838 | 7.520854e-56 | -8.615850e-47 |
| Msa0023000 | Msa0299870 | 0.816334 | 5.834022e-52 | -8.615850e-47 |
| Msa0023000 | Msa0309750 | 0.801660 | 8.106776e-49 | -8.615850e-47 |
| Msa0023000 | Msa0309880 | 0.820911 | 5.341611e-53 | -8.615850e-47 |
| Msa0023000 | Msa0310860 | 0.838889 | 2.198484e-57 | -8.615850e-47 |
| Msa0023000 | Msa0337240 | 0.834104 | 3.635388e-56 | -8.615850e-47 |
| Msa0023000 | Msa0337650 | 0.818548 | 1.850796e-52 | -8.615850e-47 |
| Msa0023000 | Msa0340380 | 0.806297 | 8.808905e-50 | -8.615850e-47 |
| Msa0023000 | Msa0345350 | 0.825008 | 5.923818e-54 | -8.615850e-47 |
| Msa0023000 | Msa0366890 | 0.830805 | 2.388437e-55 | -8.615850e-47 |
| Msa0023000 | Msa0369220 | 0.820595 | 6.313569e-53 | -8.615850e-47 |
| Msa0023000 | Msa0372340 | 0.816045 | 6.768582e-52 | -8.615850e-47 |
| Msa0023000 | Msa0376300 | 0.804589 | 2.008673e-49 | -8.615850e-47 |
| Msa0023000 | Msa0376310 | 0.804897 | 1.732374e-49 | -8.615850e-47 |
| Msa0023000 | Msa0377900 | -0.812032 | 5.199316e-51 | -8.615850e-47 |
| Msa0023000 | Msa0385580 | 0.824377 | 8.344491e-54 | -8.615850e-47 |
| Msa0023000 | Msa0388050 | 0.821624 | 3.656627e-53 | -8.615850e-47 |
| Msa0023000 | Msa0397540 | 0.830186 | 3.383542e-55 | -8.615850e-47 |
| Msa0023000 | Msa0398950 | 0.817512 | 3.173428e-52 | -8.615850e-47 |
| Msa0023000 | Msa0402790 | 0.831366 | 1.738938e-55 | -8.615850e-47 |
| Msa0023000 | Msa0405370 | 0.807266 | 5.497771e-50 | -8.615850e-47 |
| Msa0023000 | Msa0414800 | 0.811761 | 5.955860e-51 | -8.615850e-47 |
| Msa0023000 | Msa0415430 | 0.812151 | 4.898554e-51 | -8.615850e-47 |
| Msa0023000 | Msa0423450 | -0.812581 | 3.945022e-51 | -8.615850e-47 |
| Msa0023000 | Msa0429290 | 0.801897 | 7.248309e-49 | -8.615850e-47 |
| Msa0023000 | Msa0442190 | 0.826513 | 2.603888e-54 | -8.615850e-47 |
| Msa0023000 | Msa0442200 | 0.828015 | 1.136853e-54 | -8.615850e-47 |
| Msa0023000 | Msa0458060 | 0.822403 | 2.413235e-53 | -8.615850e-47 |
| Msa0023000 | Msa0471590 | 0.811412 | 7.093949e-51 | -8.615850e-47 |
| Msa0023000 | Msa0473830 | -0.824313 | 8.636897e-54 | -8.615850e-47 |
| Msa0023000 | Msa0485850 | 0.807887 | 4.057724e-50 | -8.615850e-47 |
| Msa0023000 | Msa0493410 | 0.815859 | 7.450052e-52 | -8.615850e-47 |
| Msa0023000 | Msa0497210 | 0.803079 | 4.136976e-49 | -8.615850e-47 |
| Msa0023000 | Msa0504020 | 0.846579 | 1.988359e-59 | -8.615850e-47 |
| Msa0023000 | Msa0508590 | 0.805717 | 1.166760e-49 | -8.615850e-47 |
| Msa0023000 | Msa0508870 | 0.805969 | 1.032757e-49 | -8.615850e-47 |
| Msa0023000 | Msa0509390 | 0.806109 | 9.646877e-50 | -8.615850e-47 |
| Msa0023000 | Msa0510840 | 0.807634 | 4.592038e-50 | -8.615850e-47 |
| Msa0023000 | Msa0518070 | -0.820707 | 5.950438e-53 | -8.615850e-47 |
| Msa0023000 | Msa0520790 | 0.803897 | 2.799761e-49 | -8.615850e-47 |
| Msa0023000 | Msa0529040 | 0.802453 | 5.569947e-49 | -8.615850e-47 |
| Msa0023000 | Msa0534900 | 0.857001 | 2.196730e-62 | -8.615850e-47 |
| Msa0023000 | Msa0545080 | 0.827898 | 1.213376e-54 | -8.615850e-47 |
| Msa0023000 | Msa0553220 | -0.838045 | 3.631726e-57 | -8.615850e-47 |
| Msa0023000 | Msa0555450 | 0.801986 | 6.951048e-49 | -8.615850e-47 |
| Msa0023000 | Msa0557480 | 0.851934 | 6.420542e-61 | -8.615850e-47 |
| Msa0023000 | Msa0568910 | 0.832519 | 9.024696e-56 | -8.615850e-47 |
| Msa0023000 | Msa0570330 | 0.807704 | 4.437430e-50 | -8.615850e-47 |
| Msa0023000 | Msa0588260 | 0.817084 | 3.960358e-52 | -8.615850e-47 |
| Msa0023000 | Msa0589190 | 0.836181 | 1.087395e-56 | -8.615850e-47 |
| Msa0023000 | Msa0590650 | 0.808342 | 3.246578e-50 | -8.615850e-47 |
| Msa0023000 | Msa0592440 | 0.827580 | 1.446523e-54 | -8.615850e-47 |
| Msa0023000 | Msa0607340 | -0.812920 | 3.326009e-51 | -8.615850e-47 |
| Msa0023000 | Msa0610430 | 0.834555 | 2.800556e-56 | -8.615850e-47 |
| Msa0023000 | Msa0620890 | 0.825024 | 5.873387e-54 | -8.615850e-47 |
| Msa0023000 | Msa0623860 | 0.812724 | 3.670096e-51 | -8.615850e-47 |
| Msa0023000 | Msa0625680 | 0.816601 | 5.083602e-52 | -8.615850e-47 |
| Msa0023000 | Msa0626030 | 0.805603 | 1.232853e-49 | -8.615850e-47 |
| Msa0023000 | Msa0631350 | 0.841491 | 4.601872e-58 | -8.615850e-47 |
| Msa0023000 | Msa0632870 | 0.806402 | 8.369363e-50 | -8.615850e-47 |
| Msa0023000 | Msa0647450 | -0.811282 | 7.567990e-51 | -8.615850e-47 |
| Msa0023000 | Msa0650190 | 0.819218 | 1.303395e-52 | -8.615850e-47 |
| Msa0023000 | Msa0654760 | -0.810866 | 9.315893e-51 | -8.615850e-47 |
| Msa0023000 | Msa0660490 | 0.818944 | 1.504407e-52 | -8.615850e-47 |
| Msa0023000 | Msa0663920 | 0.804982 | 1.662798e-49 | -8.615850e-47 |
| Msa0023000 | Msa0669720 | 0.801219 | 9.983465e-49 | -8.615850e-47 |
| Msa0023000 | Msa0671740 | 0.801804 | 7.575996e-49 | -8.615850e-47 |
| Msa0023000 | Msa0675410 | 0.800518 | 1.388254e-48 | -8.615850e-47 |
| Msa0023000 | Msa0684180 | -0.802369 | 5.795920e-49 | -8.615850e-47 |
| Msa0023000 | Msa0692830 | 0.831010 | 2.127108e-55 | -8.615850e-47 |
| Msa0023000 | Msa0692940 | 0.806004 | 1.015464e-49 | -8.615850e-47 |
| Msa0023000 | Msa0692950 | 0.813126 | 2.997656e-51 | -8.615850e-47 |
| Msa0023000 | Msa0698540 | 0.810969 | 8.848426e-51 | -8.615850e-47 |
| Msa0023000 | Msa0716840 | 0.806405 | 8.356950e-50 | -8.615850e-47 |
| Msa0023000 | Msa0722020 | 0.828302 | 9.693770e-55 | -8.615850e-47 |
| Msa0023000 | Msa0737600 | 0.806330 | 8.667831e-50 | -8.615850e-47 |
| Msa0023000 | Msa0738380 | 0.804498 | 2.098656e-49 | -8.615850e-47 |
| Msa0023000 | Msa0747260 | 0.818922 | 1.521785e-52 | -8.615850e-47 |
| Msa0023000 | Msa0748170 | 0.800998 | 1.107623e-48 | -8.615850e-47 |
| Msa0023000 | Msa0763020 | 0.809679 | 1.679440e-50 | -8.615850e-47 |
| Msa0023000 | Msa0763070 | 0.804747 | 1.862545e-49 | -8.615850e-47 |
| Msa0023000 | Msa0769980 | 0.852114 | 5.707459e-61 | -8.615850e-47 |
| Msa0023000 | Msa0771720 | 0.843680 | 1.207473e-58 | -8.615850e-47 |
| Msa0023000 | Msa0784860 | 0.878131 | 3.600052e-69 | -8.615850e-47 |
| Msa0023000 | Msa0793380 | 0.829120 | 6.147757e-55 | -8.615850e-47 |
| Msa0023000 | Msa0798440 | 0.810373 | 1.190284e-50 | -8.615850e-47 |
| Msa0023000 | Msa0801110 | 0.838214 | 3.285497e-57 | -8.615850e-47 |
| Msa0023000 | Msa0808080 | 0.819141 | 1.357511e-52 | -8.615850e-47 |
| Msa0023000 | Msa0809770 | 0.816404 | 5.627598e-52 | -8.615850e-47 |
| Msa0023000 | Msa0813670 | 0.809781 | 1.596888e-50 | -8.615850e-47 |
| Msa0023000 | Msa0813720 | 0.817218 | 3.695021e-52 | -8.615850e-47 |
| Msa0023000 | Msa0817730 | 0.839115 | 1.921648e-57 | -8.615850e-47 |
| Msa0023000 | Msa0818750 | 0.802550 | 5.319032e-49 | -8.615850e-47 |
| Msa0023000 | Msa0842830 | 0.823535 | 1.314315e-53 | -8.615850e-47 |
| Msa0023000 | Msa0849030 | 0.837356 | 5.455270e-57 | -8.615850e-47 |
| Msa0023000 | Msa0858180 | 0.841600 | 4.306831e-58 | -8.615850e-47 |
| Msa0023000 | Msa0870150 | 0.812964 | 3.252554e-51 | -8.615850e-47 |
| Msa0023000 | Msa0887250 | 0.830704 | 2.528116e-55 | -8.615850e-47 |
| Msa0023000 | Msa0891510 | 0.807896 | 4.039587e-50 | -8.615850e-47 |
| Msa0023000 | Msa0894950 | 0.818366 | 2.035117e-52 | -8.615850e-47 |
| Msa0023000 | Msa0899240 | -0.822594 | 2.179423e-53 | -8.615850e-47 |
| Msa0023000 | Msa0899640 | 0.820121 | 8.109585e-53 | -8.615850e-47 |
| Msa0023000 | Msa0900110 | 0.809184 | 2.144728e-50 | -8.615850e-47 |
| Msa0023000 | Msa0900630 | 0.806179 | 9.327796e-50 | -8.615850e-47 |
| Msa0023000 | Msa0926460 | 0.822150 | 2.762264e-53 | -8.615850e-47 |
| Msa0023000 | Msa0927260 | 0.847088 | 1.442428e-59 | -8.615850e-47 |
| Msa0023000 | Msa0964870 | 0.818202 | 2.216318e-52 | -8.615850e-47 |
| Msa0023000 | Msa0965860 | 0.820316 | 7.316664e-53 | -8.615850e-47 |
| Msa0023000 | Msa0974810 | 0.818705 | 1.705299e-52 | -8.615850e-47 |
| Msa0023000 | Msa0987370 | 0.807901 | 4.029838e-50 | -8.615850e-47 |
| Msa0023000 | Msa0999050 | -0.821007 | 5.074432e-53 | -8.615850e-47 |
| Msa0023000 | Msa0999430 | 0.817053 | 4.025008e-52 | -8.615850e-47 |
| Msa0023000 | Msa0999970 | 0.807121 | 5.900317e-50 | -8.615850e-47 |
| Msa0023000 | Msa1000690 | 0.809258 | 2.068036e-50 | -8.615850e-47 |
| Msa0023000 | Msa1006710 | 0.804258 | 2.354610e-49 | -8.615850e-47 |
| Msa0023000 | Msa1009820 | 0.825496 | 4.542386e-54 | -8.615850e-47 |
| Msa0023000 | Msa1012830 | 0.837489 | 5.043770e-57 | -8.615850e-47 |
| Msa0023000 | Msa1023180 | 0.807775 | 4.286374e-50 | -8.615850e-47 |
| Msa0023000 | Msa1029050 | 0.811740 | 6.018214e-51 | -8.615850e-47 |
| Msa0023000 | Msa1030620 | 0.821478 | 3.952661e-53 | -8.615850e-47 |
| Msa0023000 | Msa1037420 | 0.835895 | 1.285280e-56 | -8.615850e-47 |
| Msa0023000 | Msa1043050 | 0.811083 | 8.359275e-51 | -8.615850e-47 |
| Msa0023000 | Msa1046020 | 0.803096 | 4.103061e-49 | -8.615850e-47 |
| Msa0023000 | Msa1046060 | 0.801799 | 7.591738e-49 | -8.615850e-47 |
| Msa0023000 | Msa1051200 | 0.847593 | 1.048292e-59 | -8.615850e-47 |
| Msa0023000 | Msa1063510 | 0.810429 | 1.157685e-50 | -8.615850e-47 |
| Msa0023000 | Msa1072460 | -0.804299 | 2.309040e-49 | -8.615850e-47 |
| Msa0023000 | Msa1077030 | 0.815450 | 9.188318e-52 | -8.615850e-47 |
| Msa0023000 | Msa1081930 | 0.821350 | 4.231255e-53 | -8.615850e-47 |
| Msa0023000 | Msa1084470 | 0.815637 | 8.348076e-52 | -8.615850e-47 |
| Msa0023000 | Msa1091100 | 0.812261 | 4.633694e-51 | -8.615850e-47 |
| Msa0023000 | Msa1091940 | 0.821894 | 3.167398e-53 | -8.615850e-47 |
| Msa0023000 | Msa1107160 | 0.808282 | 3.342990e-50 | -8.615850e-47 |
| Msa0023000 | Msa1123810 | 0.806519 | 7.907478e-50 | -8.615850e-47 |
| Msa0023000 | Msa1133230 | 0.800078 | 1.706060e-48 | -8.615850e-47 |
| Msa0023000 | Msa1134090 | 0.804943 | 1.694224e-49 | -8.615850e-47 |
| Msa0023000 | Msa1136540 | 0.817305 | 3.533172e-52 | -8.615850e-47 |
| Msa0023000 | Msa1137700 | 0.829945 | 3.875262e-55 | -8.615850e-47 |
| Msa0023000 | Msa1138870 | 0.806726 | 7.151726e-50 | -8.615850e-47 |
| Msa0023000 | Msa1143930 | -0.825211 | 5.304977e-54 | -8.615850e-47 |
| Msa0023000 | Msa1150710 | 0.813649 | 2.299898e-51 | -8.615850e-47 |
| Msa0023000 | Msa1174040 | 0.806887 | 6.613471e-50 | -8.615850e-47 |
| Msa0023000 | Msa1181250 | 0.800261 | 1.566098e-48 | -8.615850e-47 |
| Msa0023000 | Msa1190930 | 0.806134 | 9.533188e-50 | -8.615850e-47 |
| Msa0023000 | Msa1210020 | 0.803727 | 3.037096e-49 | -8.615850e-47 |
| Msa0023000 | Msa1217430 | -0.828316 | 9.619655e-55 | -8.615850e-47 |
| Msa0023000 | Msa1217470 | 0.806380 | 8.458831e-50 | -8.615850e-47 |
| Msa0023000 | Msa1224810 | 0.829345 | 5.423026e-55 | -8.615850e-47 |
| Msa0023000 | Msa1237660 | 0.806016 | 1.009217e-49 | -8.615850e-47 |
| Msa0023000 | Msa1237940 | 0.813590 | 2.369860e-51 | -8.615850e-47 |
| Msa0023000 | Msa1253800 | 0.812309 | 4.524127e-51 | -8.615850e-47 |
| Msa0023000 | Msa1254730 | 0.830937 | 2.216435e-55 | -8.615850e-47 |
| Msa0023000 | Msa1260130 | 0.832914 | 7.201262e-56 | -8.615850e-47 |
| Msa0023000 | Msa1262920 | 0.805450 | 1.327473e-49 | -8.615850e-47 |
| Msa0023000 | Msa1267260 | 0.805253 | 1.459318e-49 | -8.615850e-47 |
| Msa0023000 | Msa1275360 | 0.808086 | 3.681930e-50 | -8.615850e-47 |
| Msa0023000 | Msa1293510 | 0.812137 | 4.931024e-51 | -8.615850e-47 |
| Msa0023000 | Msa1294070 | 0.800049 | 1.729241e-48 | -8.615850e-47 |
| Msa0023000 | Msa1296830 | 0.825212 | 5.303041e-54 | -8.615850e-47 |
| Msa0023000 | Msa1298510 | 0.802429 | 5.632892e-49 | -8.615850e-47 |
| Msa0023000 | Msa1300050 | 0.825431 | 4.704231e-54 | -8.615850e-47 |
| Msa0023000 | Msa1302100 | 0.815278 | 1.003592e-51 | -8.615850e-47 |
| Msa0023000 | Msa1302190 | -0.826174 | 3.135638e-54 | -8.615850e-47 |
| Msa0023000 | Msa1332040 | -0.812867 | 3.414935e-51 | -8.615850e-47 |
| Msa0023000 | Msa1332590 | 0.801568 | 8.467033e-49 | -8.615850e-47 |
| Msa0023000 | Msa1348850 | 0.806121 | 9.592552e-50 | -8.615850e-47 |
| Msa0023000 | Msa1348950 | 0.801275 | 9.722667e-49 | -8.615850e-47 |
| Msa0023000 | Msa1355970 | 0.810322 | 1.220927e-50 | -8.615850e-47 |
| Msa0023000 | Msa1359630 | 0.814214 | 1.726770e-51 | -8.615850e-47 |
| Msa0023000 | Msa1361520 | 0.807449 | 5.027415e-50 | -8.615850e-47 |
| Msa0023000 | Msa1368120 | 0.812715 | 3.687318e-51 | -8.615850e-47 |
| Msa0023000 | Msa1379760 | 0.809695 | 1.666327e-50 | -8.615850e-47 |
| Msa0023000 | Msa1385770 | 0.829919 | 3.930545e-55 | -8.615850e-47 |
| Msa0023000 | Msa1386780 | 0.805770 | 1.137250e-49 | -8.615850e-47 |
| Msa0023000 | Msa1387200 | 0.800749 | 1.245639e-48 | -8.615850e-47 |
| Msa0023000 | Msa1403340 | 0.806131 | 9.546764e-50 | -8.615850e-47 |
| Msa0023000 | Msa1409240 | 0.829003 | 6.561753e-55 | -8.615850e-47 |
| Msa0023000 | Msa1410100 | 0.800444 | 1.437012e-48 | -8.615850e-47 |
| Msa0023000 | Msa1420990 | 0.808681 | 2.748153e-50 | -8.615850e-47 |
| Msa0023000 | Msa1434140 | 0.818180 | 2.242201e-52 | -8.615850e-47 |
| Msa0023000 | Msa1436520 | 0.804876 | 1.750354e-49 | -8.615850e-47 |
| Msa0023000 | Msa1440000 | 0.806230 | 9.099354e-50 | -8.615850e-47 |
| Msa0023000 | Msa1444310 | 0.815663 | 8.239059e-52 | -8.615850e-47 |
| Msa0023000 | Msa1448620 | 0.815057 | 1.123335e-51 | -8.615850e-47 |
| Msa0023000 | Msa1451550 | 0.830928 | 2.228229e-55 | -8.615850e-47 |
| Msa0023000 | Msa1454480 | 0.806006 | 1.014360e-49 | -8.615850e-47 |
| Msa0023000 | Msa1457920 | 0.804678 | 1.924639e-49 | -8.615850e-47 |
| Msa0023000 | Msa1461280 | 0.800803 | 1.214114e-48 | -8.615850e-47 |
| Msa0023000 | Msa1465850 | 0.801088 | 1.062111e-48 | -8.615850e-47 |
| Msa0023000 | Msa1465960 | 0.837850 | 4.075921e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023000 | MtrunA17_Chr1g0176311 | 93.194 | 191 | 12 | 1 | 1 | 191 | 1 | 190 | 1.51e-131 | 366 |
| Msa0023000 | MtrunA17_Chr1g0176321 | 80.226 | 177 | 29 | 4 | 21 | 191 | 1 | 177 | 2.23e-98 | 282 |
| Msa0023000 | MtrunA17_Chr1g0192651 | 40.462 | 173 | 86 | 4 | 13 | 185 | 3 | 158 | 1.44e-34 | 120 |
| Msa0023000 | MtrunA17_Chr1g0195661 | 36.158 | 177 | 101 | 3 | 13 | 188 | 2 | 167 | 9.56e-32 | 112 |
| Msa0023000 | MtrunA17_Chr1g0194801 | 35.088 | 171 | 94 | 5 | 17 | 184 | 2 | 158 | 2.33e-30 | 108 |
| Msa0023000 | MtrunA17_Chr5g0427291 | 35.976 | 164 | 96 | 4 | 25 | 182 | 10 | 170 | 9.14e-28 | 102 |
| Msa0023000 | MtrunA17_Chr7g0269301 | 32.738 | 168 | 100 | 3 | 22 | 188 | 7 | 162 | 1.53e-22 | 89.0 |
| Msa0023000 | MtrunA17_Chr2g0294421 | 31.737 | 167 | 103 | 3 | 24 | 188 | 6 | 163 | 4.62e-19 | 80.1 |
| Msa0023000 | MtrunA17_Chr4g0001641 | 49.180 | 61 | 31 | 0 | 122 | 182 | 5 | 65 | 5.52e-19 | 77.0 |
| Msa0023000 | MtrunA17_Chr4g0032261 | 32.738 | 168 | 88 | 4 | 24 | 182 | 6 | 157 | 1.24e-18 | 79.0 |
| Msa0023000 | MtrunA17_Chr5g0433951 | 29.825 | 171 | 105 | 3 | 25 | 191 | 7 | 166 | 6.95e-18 | 77.0 |
| Msa0023000 | MtrunA17_Chr2g0323291 | 30.556 | 180 | 92 | 6 | 24 | 188 | 26 | 187 | 1.62e-17 | 77.4 |
| Msa0023000 | MtrunA17_Chr6g0450171 | 31.959 | 97 | 66 | 0 | 86 | 182 | 66 | 162 | 2.41e-16 | 73.2 |
| Msa0023000 | MtrunA17_Chr4g0008801 | 30.625 | 160 | 96 | 4 | 27 | 182 | 9 | 157 | 2.36e-14 | 67.4 |
| Msa0023000 | MtrunA17_Chr7g0240701 | 28.485 | 165 | 99 | 3 | 24 | 182 | 6 | 157 | 6.86e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023000 | AT3G11930.1 | 54.545 | 176 | 78 | 2 | 15 | 189 | 25 | 199 | 1.57e-68 | 207 |
| Msa0023000 | AT3G11930.2 | 54.802 | 177 | 77 | 3 | 15 | 189 | 25 | 200 | 2.90e-67 | 204 |
| Msa0023000 | AT3G11930.4 | 54.494 | 178 | 77 | 3 | 15 | 189 | 25 | 201 | 3.64e-67 | 204 |
| Msa0023000 | AT3G11930.3 | 47.783 | 203 | 77 | 4 | 15 | 189 | 25 | 226 | 8.29e-61 | 189 |
| Msa0023000 | AT3G58450.1 | 53.704 | 162 | 74 | 1 | 25 | 186 | 32 | 192 | 9.76e-59 | 183 |
| Msa0023000 | AT3G58450.2 | 53.086 | 162 | 68 | 3 | 25 | 186 | 32 | 185 | 7.03e-55 | 173 |
| Msa0023000 | AT1G09740.2 | 38.415 | 164 | 94 | 2 | 25 | 186 | 10 | 168 | 1.19e-30 | 110 |
| Msa0023000 | AT1G09740.1 | 38.415 | 164 | 94 | 2 | 25 | 186 | 10 | 168 | 1.19e-30 | 110 |
| Msa0023000 | AT3G62550.1 | 35.404 | 161 | 90 | 4 | 24 | 182 | 8 | 156 | 6.01e-26 | 98.2 |
| Msa0023000 | AT1G68300.1 | 32.738 | 168 | 101 | 3 | 15 | 182 | 2 | 157 | 2.65e-25 | 96.3 |
| Msa0023000 | AT2G47710.1 | 32.121 | 165 | 99 | 3 | 22 | 185 | 7 | 159 | 2.82e-25 | 96.3 |
| Msa0023000 | AT3G17020.1 | 32.298 | 161 | 99 | 2 | 24 | 182 | 8 | 160 | 5.88e-18 | 77.4 |
| Msa0023000 | AT3G01520.1 | 25.595 | 168 | 104 | 3 | 24 | 182 | 7 | 162 | 2.91e-17 | 75.9 |
| Msa0023000 | AT3G03270.2 | 31.214 | 173 | 82 | 4 | 25 | 182 | 7 | 157 | 1.62e-16 | 73.6 |
| Msa0023000 | AT5G14680.1 | 26.190 | 168 | 103 | 3 | 24 | 182 | 7 | 162 | 5.27e-16 | 72.4 |
| Msa0023000 | AT3G53990.1 | 26.190 | 168 | 99 | 3 | 27 | 185 | 9 | 160 | 1.44e-12 | 63.2 |
Find 54 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCATATAATTGTGGAAAA+TGG | 0.167677 | 1_1:+43590980 | None:intergenic |
| CACAATTATATGCACCCTAT+TGG | 0.247878 | 1_1:-43590972 | Msa0023000:CDS |
| CCACCACCACCTGGTCCAAT+AGG | 0.318407 | 1_1:+43590957 | None:intergenic |
| ATTTGGTGTAGAGCATTTCT+TGG | 0.348715 | 1_1:-43588986 | Msa0023000:intron |
| AATCATGGGTAGCCGTGGCC+TGG | 0.369904 | 1_1:-43589414 | Msa0023000:CDS |
| AAAAGGGTGATGGAGGAAAT+AGG | 0.378001 | 1_1:-43591200 | None:intergenic |
| GCAAGTTGATCTCTTAATCA+TGG | 0.412365 | 1_1:-43589429 | Msa0023000:CDS |
| TTATCCAGCATCTGTGGTTG+TGG | 0.413861 | 1_1:-43590545 | Msa0023000:CDS |
| TGCATATAATTGTGGAAAAT+GGG | 0.413967 | 1_1:+43590981 | None:intergenic |
| GCCTGACAAATCATTTCCCT+TGG | 0.420407 | 1_1:+43589464 | None:intergenic |
| ATCATGGGTAGCCGTGGCCT+GGG | 0.449797 | 1_1:-43589413 | Msa0023000:CDS |
| CCCAAGGGAAATGATTTGTC+AGG | 0.453085 | 1_1:-43589465 | Msa0023000:CDS |
| TAACTGCTGATCTTTCTTGC+TGG | 0.457940 | 1_1:+43590506 | None:intergenic |
| CACCACCACCTGGTCCAATA+GGG | 0.474544 | 1_1:+43590958 | None:intergenic |
| GCAGAAAGTGTAATTCTCAA+TGG | 0.481801 | 1_1:-43589491 | Msa0023000:CDS |
| GAATCCACAACCACAGATGC+TGG | 0.485403 | 1_1:+43590541 | None:intergenic |
| CCTATTGGACCAGGTGGTGG+TGG | 0.487554 | 1_1:-43590957 | Msa0023000:intron |
| AGGAACATCATCTGAAAATG+AGG | 0.493972 | 1_1:-43591030 | Msa0023000:CDS |
| GTGGCCTGGGCACACTCAAA+AGG | 0.501846 | 1_1:-43589400 | Msa0023000:intron |
| GCAAATGTGCAAGGATAAGC+AGG | 0.503833 | 1_1:-43590467 | Msa0023000:intron |
| CCTGACAAATCATTTCCCTT+GGG | 0.505400 | 1_1:+43589465 | None:intergenic |
| TTCAGATGATGTTCCTTCCA+TGG | 0.510145 | 1_1:+43591037 | None:intergenic |
| ATCAGCAGTTATTCTTTCGC+GGG | 0.511531 | 1_1:-43590494 | Msa0023000:CDS |
| TGGAAGTGTTGATCAAGTGA+GGG | 0.512230 | 1_1:-43591177 | Msa0023000:CDS |
| TAAAGTTGAAGAGATTATCA+AGG | 0.517712 | 1_1:+43591066 | None:intergenic |
| AAAGAGAAGGATGAAGATGA+AGG | 0.523647 | 1_1:-43591141 | Msa0023000:CDS |
| ATCATCTGAAAATGAGGGAA+TGG | 0.523826 | 1_1:-43591024 | Msa0023000:CDS |
| GGTGGCTTCACAATGAGAAT+AGG | 0.526593 | 1_1:+43588926 | None:intergenic |
| CACCCTATTGGACCAGGTGG+TGG | 0.530142 | 1_1:-43590960 | Msa0023000:CDS |
| GATCAGCAGTTATTCTTTCG+CGG | 0.533226 | 1_1:-43590495 | Msa0023000:CDS |
| CTTCAACTTTATGACTGCCA+TGG | 0.538211 | 1_1:-43591054 | Msa0023000:CDS |
| CAATAGGGTGCATATAATTG+TGG | 0.539598 | 1_1:+43590973 | None:intergenic |
| CTCTTAATCATGGGTAGCCG+TGG | 0.547180 | 1_1:-43589419 | Msa0023000:CDS |
| GCGGGCTTTGCAAATGTGCA+AGG | 0.556519 | 1_1:-43590476 | Msa0023000:CDS |
| CAAGTTGATCTCTTAATCAT+GGG | 0.558572 | 1_1:-43589428 | Msa0023000:CDS |
| AACTTTATGACTGCCATGGA+AGG | 0.559729 | 1_1:-43591050 | Msa0023000:CDS |
| GTGGAAGTGTTGATCAAGTG+AGG | 0.562018 | 1_1:-43591178 | Msa0023000:CDS |
| GGAACATCATCTGAAAATGA+GGG | 0.582944 | 1_1:-43591029 | Msa0023000:CDS |
| GAGGTGCAGAAGAAAAGAGA+AGG | 0.584561 | 1_1:-43591154 | Msa0023000:CDS |
| AAAGTTGAAGAGATTATCAA+GGG | 0.605580 | 1_1:+43591067 | None:intergenic |
| GATGAAGATGAAGGTGATGG+TGG | 0.605709 | 1_1:-43591132 | Msa0023000:CDS |
| TATTCTCATTGTGAAGCCAC+CGG | 0.610544 | 1_1:-43588924 | Msa0023000:CDS |
| GGAAGTGTTGATCAAGTGAG+GGG | 0.617330 | 1_1:-43591176 | Msa0023000:CDS |
| TAATTCTCAATGGAGACCCA+AGG | 0.620896 | 1_1:-43589481 | Msa0023000:CDS |
| GTTGTGGATTCAGTGAAGAA+AGG | 0.627405 | 1_1:-43590529 | Msa0023000:CDS |
| AGATACGAACCACCACCACC+TGG | 0.637770 | 1_1:+43590948 | None:intergenic |
| TATATGCACCCTATTGGACC+AGG | 0.642137 | 1_1:-43590966 | Msa0023000:CDS |
| AAGGATGAAGATGAAGGTGA+TGG | 0.645453 | 1_1:-43591135 | Msa0023000:CDS |
| GTGGCAATAGATGAGAGTGA+TGG | 0.658459 | 1_1:-43591113 | Msa0023000:CDS |
| AATTCTCAATGGAGACCCAA+GGG | 0.664861 | 1_1:-43589480 | Msa0023000:CDS |
| ATGCACCCTATTGGACCAGG+TGG | 0.672679 | 1_1:-43590963 | Msa0023000:CDS |
| TCTCATTGTGAAGCCACCGG+AGG | 0.677993 | 1_1:-43588921 | Msa0023000:CDS |
| AGGGTGATGGAGGAAATAGG+TGG | 0.693358 | 1_1:-43591197 | None:intergenic |
| AGTGTTGATCAAGTGAGGGG+AGG | 0.733239 | 1_1:-43591173 | Msa0023000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTAAATTAAATTAAA+TGG | - | chr1_1:43589773-43589792 | Msa0023000:intron | 0.0% |
| !! | TTAAATTAAATTAAATTAAA+TGG | - | chr1_1:43589773-43589792 | Msa0023000:intron | 0.0% |
| !! | TAAAAAAAGCAAAAAAATTT+GGG | - | chr1_1:43590409-43590428 | Msa0023000:intron | 10.0% |
| !! | AAATGATAAAAATTAAAAGA+TGG | + | chr1_1:43590487-43590506 | None:intergenic | 10.0% |
| !! | TGTTCATAATAATAATTTAA+AGG | + | chr1_1:43590891-43590910 | None:intergenic | 10.0% |
| !! | CCAAATATATAAAAAAAAAA+GGG | + | chr1_1:43591092-43591111 | None:intergenic | 10.0% |
| !! | ACCAAATATATAAAAAAAAA+AGG | + | chr1_1:43591093-43591112 | None:intergenic | 10.0% |
| !! | TAAAAAAAGCAAAAAAATTT+GGG | - | chr1_1:43590409-43590428 | Msa0023000:intron | 10.0% |
| !! | AAATGATAAAAATTAAAAGA+TGG | + | chr1_1:43590487-43590506 | None:intergenic | 10.0% |
| !! | TGTTCATAATAATAATTTAA+AGG | + | chr1_1:43590891-43590910 | None:intergenic | 10.0% |
| !! | CCAAATATATAAAAAAAAAA+GGG | + | chr1_1:43591092-43591111 | None:intergenic | 10.0% |
| !! | ACCAAATATATAAAAAAAAA+AGG | + | chr1_1:43591093-43591112 | None:intergenic | 10.0% |
| !! | GAATTCTTAAAAAATAATCT+GGG | + | chr1_1:43589881-43589900 | None:intergenic | 15.0% |
| !!! | GTTAAAATTGATATTTTCAA+TGG | + | chr1_1:43590127-43590146 | None:intergenic | 15.0% |
| !!! | TCAATTTTGAAAAACTTAAT+GGG | + | chr1_1:43590175-43590194 | None:intergenic | 15.0% |
| !!! | TTCAATTTTGAAAAACTTAA+TGG | + | chr1_1:43590176-43590195 | None:intergenic | 15.0% |
| !! | ATGAATCAATTAATTAGAAA+AGG | + | chr1_1:43590277-43590296 | None:intergenic | 15.0% |
| !!! | TATGAGAAATACTATTTTTT+AGG | - | chr1_1:43590334-43590353 | Msa0023000:intron | 15.0% |
| !!! | ATGAGAAATACTATTTTTTA+GGG | - | chr1_1:43590335-43590354 | Msa0023000:intron | 15.0% |
| !! | GTAAAAAAAGCAAAAAAATT+TGG | - | chr1_1:43590408-43590427 | Msa0023000:intron | 15.0% |
| !!! | TTAATTTTTATCATTTGTGT+AGG | - | chr1_1:43590491-43590510 | Msa0023000:CDS | 15.0% |
| !! | TAATAATTTAAAGGTAAGAT+TGG | + | chr1_1:43590882-43590901 | None:intergenic | 15.0% |
| !!! | TATTAATTTTGGTTTCATTT+TGG | - | chr1_1:43591056-43591075 | Msa0023000:CDS | 15.0% |
| !!! | CCCTTTTTTTTTTATATATT+TGG | - | chr1_1:43591089-43591108 | Msa0023000:CDS | 15.0% |
| !! | GAATTCTTAAAAAATAATCT+GGG | + | chr1_1:43589881-43589900 | None:intergenic | 15.0% |
| !!! | GTTAAAATTGATATTTTCAA+TGG | + | chr1_1:43590127-43590146 | None:intergenic | 15.0% |
| !!! | TCAATTTTGAAAAACTTAAT+GGG | + | chr1_1:43590175-43590194 | None:intergenic | 15.0% |
| !!! | TTCAATTTTGAAAAACTTAA+TGG | + | chr1_1:43590176-43590195 | None:intergenic | 15.0% |
| !! | ATGAATCAATTAATTAGAAA+AGG | + | chr1_1:43590277-43590296 | None:intergenic | 15.0% |
| !!! | TATGAGAAATACTATTTTTT+AGG | - | chr1_1:43590334-43590353 | Msa0023000:intron | 15.0% |
| !!! | ATGAGAAATACTATTTTTTA+GGG | - | chr1_1:43590335-43590354 | Msa0023000:intron | 15.0% |
| !! | GTAAAAAAAGCAAAAAAATT+TGG | - | chr1_1:43590408-43590427 | Msa0023000:intron | 15.0% |
| !!! | TTAATTTTTATCATTTGTGT+AGG | - | chr1_1:43590491-43590510 | Msa0023000:CDS | 15.0% |
| !! | TAATAATTTAAAGGTAAGAT+TGG | + | chr1_1:43590882-43590901 | None:intergenic | 15.0% |
| !!! | TATTAATTTTGGTTTCATTT+TGG | - | chr1_1:43591056-43591075 | Msa0023000:CDS | 15.0% |
| !!! | CCCTTTTTTTTTTATATATT+TGG | - | chr1_1:43591089-43591108 | Msa0023000:CDS | 15.0% |
| !!! | TTCTAAAGAAAGATATTCAA+AGG | + | chr1_1:43589188-43589207 | None:intergenic | 20.0% |
| !! | GGAATTCTTAAAAAATAATC+TGG | + | chr1_1:43589882-43589901 | None:intergenic | 20.0% |
| !! | AATTCGTATATTCAATTCAT+TGG | + | chr1_1:43589950-43589969 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTGACAACTAAT+AGG | + | chr1_1:43590074-43590093 | None:intergenic | 20.0% |
| !! | TTTGTTGGAATTATTTGATA+GGG | + | chr1_1:43590104-43590123 | None:intergenic | 20.0% |
| !!! | TGAGAAATACTATTTTTTAG+GGG | - | chr1_1:43590336-43590355 | Msa0023000:intron | 20.0% |
| !! | GTACTTCAATATAGAAAATA+TGG | + | chr1_1:43590747-43590766 | None:intergenic | 20.0% |
| !!! | GATTTTCCATTATGATATTT+TGG | + | chr1_1:43590920-43590939 | None:intergenic | 20.0% |
| !!! | AAAATAGTCTTGTTACATAT+TGG | + | chr1_1:43590945-43590964 | None:intergenic | 20.0% |
| !!! | TTCTAAAGAAAGATATTCAA+AGG | + | chr1_1:43589188-43589207 | None:intergenic | 20.0% |
| !! | GGAATTCTTAAAAAATAATC+TGG | + | chr1_1:43589882-43589901 | None:intergenic | 20.0% |
| !! | AATTCGTATATTCAATTCAT+TGG | + | chr1_1:43589950-43589969 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTGACAACTAAT+AGG | + | chr1_1:43590074-43590093 | None:intergenic | 20.0% |
| !! | TTTGTTGGAATTATTTGATA+GGG | + | chr1_1:43590104-43590123 | None:intergenic | 20.0% |
| !!! | TGAGAAATACTATTTTTTAG+GGG | - | chr1_1:43590336-43590355 | Msa0023000:intron | 20.0% |
| !! | GTACTTCAATATAGAAAATA+TGG | + | chr1_1:43590747-43590766 | None:intergenic | 20.0% |
| !!! | GATTTTCCATTATGATATTT+TGG | + | chr1_1:43590920-43590939 | None:intergenic | 20.0% |
| !!! | AAAATAGTCTTGTTACATAT+TGG | + | chr1_1:43590945-43590964 | None:intergenic | 20.0% |
| ! | AAAGTTGAAGAGATTATCAA+GGG | + | chr1_1:43589028-43589047 | None:intergenic | 25.0% |
| ! | TAAAGTTGAAGAGATTATCA+AGG | + | chr1_1:43589029-43589048 | None:intergenic | 25.0% |
| ! | TGCATATAATTGTGGAAAAT+GGG | + | chr1_1:43589114-43589133 | None:intergenic | 25.0% |
| ! | AAAGATATTCAAAGGAGATA+AGG | + | chr1_1:43589180-43589199 | None:intergenic | 25.0% |
| ! | AAATATCAAAATTGCTTGGT+CGG | + | chr1_1:43589376-43589395 | None:intergenic | 25.0% |
| ! | GCAAAAATATCAAAATTGCT+TGG | + | chr1_1:43589380-43589399 | None:intergenic | 25.0% |
| !! | TTTTTATTGTATCTGAGTAG+AGG | + | chr1_1:43589675-43589694 | None:intergenic | 25.0% |
| !! | TTGAGTTTGGATTTTATCAA+AGG | - | chr1_1:43589838-43589857 | Msa0023000:intron | 25.0% |
| !! | TGAGTTTGGATTTTATCAAA+GGG | - | chr1_1:43589839-43589858 | Msa0023000:intron | 25.0% |
| ! | GGTGTAATTGATGAAAATAA+GGG | + | chr1_1:43589980-43589999 | None:intergenic | 25.0% |
| ! | GAATTATTTGATAGGGTATA+GGG | + | chr1_1:43590097-43590116 | None:intergenic | 25.0% |
| !! | GTTTGTTGGAATTATTTGAT+AGG | + | chr1_1:43590105-43590124 | None:intergenic | 25.0% |
| !!! | TGATATTTTCAATGGTTTGT+TGG | + | chr1_1:43590119-43590138 | None:intergenic | 25.0% |
| ! | TTTGAAAAACTTAATGGGAT+GGG | + | chr1_1:43590170-43590189 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAACTTAATGGGA+TGG | + | chr1_1:43590171-43590190 | None:intergenic | 25.0% |
| !!! | ACTATTTTTCTAGTTGCATT+AGG | - | chr1_1:43590204-43590223 | Msa0023000:intron | 25.0% |
| !!! | AAGGTATGATTTGTGTTTTA+GGG | + | chr1_1:43590235-43590254 | None:intergenic | 25.0% |
| ! | AGAAGACTAATAAAAGAACA+AGG | + | chr1_1:43590254-43590273 | None:intergenic | 25.0% |
| !!! | AACACTCATTTTAAAACTGA+GGG | + | chr1_1:43590786-43590805 | None:intergenic | 25.0% |
| !!! | TAACACTCATTTTAAAACTG+AGG | + | chr1_1:43590787-43590806 | None:intergenic | 25.0% |
| ! | TAAAGGTAAGATTGGAAAAA+AGG | + | chr1_1:43590874-43590893 | None:intergenic | 25.0% |
| ! | CAACTTCCAAAATATCATAA+TGG | - | chr1_1:43590911-43590930 | Msa0023000:intron | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | + | chr1_1:43591026-43591045 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | - | chr1_1:43591027-43591046 | Msa0023000:CDS | 25.0% |
| !!! | AACGGAAAGAGTATTAATTT+TGG | - | chr1_1:43591045-43591064 | Msa0023000:CDS | 25.0% |
| ! | AAAGTTGAAGAGATTATCAA+GGG | + | chr1_1:43589028-43589047 | None:intergenic | 25.0% |
| ! | TAAAGTTGAAGAGATTATCA+AGG | + | chr1_1:43589029-43589048 | None:intergenic | 25.0% |
| ! | TGCATATAATTGTGGAAAAT+GGG | + | chr1_1:43589114-43589133 | None:intergenic | 25.0% |
| ! | AAAGATATTCAAAGGAGATA+AGG | + | chr1_1:43589180-43589199 | None:intergenic | 25.0% |
| ! | AAATATCAAAATTGCTTGGT+CGG | + | chr1_1:43589376-43589395 | None:intergenic | 25.0% |
| ! | GCAAAAATATCAAAATTGCT+TGG | + | chr1_1:43589380-43589399 | None:intergenic | 25.0% |
| !! | TTTTTATTGTATCTGAGTAG+AGG | + | chr1_1:43589675-43589694 | None:intergenic | 25.0% |
| !! | TTGAGTTTGGATTTTATCAA+AGG | - | chr1_1:43589838-43589857 | Msa0023000:intron | 25.0% |
| !! | TGAGTTTGGATTTTATCAAA+GGG | - | chr1_1:43589839-43589858 | Msa0023000:intron | 25.0% |
| ! | GGTGTAATTGATGAAAATAA+GGG | + | chr1_1:43589980-43589999 | None:intergenic | 25.0% |
| ! | GAATTATTTGATAGGGTATA+GGG | + | chr1_1:43590097-43590116 | None:intergenic | 25.0% |
| !! | GTTTGTTGGAATTATTTGAT+AGG | + | chr1_1:43590105-43590124 | None:intergenic | 25.0% |
| !!! | TGATATTTTCAATGGTTTGT+TGG | + | chr1_1:43590119-43590138 | None:intergenic | 25.0% |
| ! | TTTGAAAAACTTAATGGGAT+GGG | + | chr1_1:43590170-43590189 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAACTTAATGGGA+TGG | + | chr1_1:43590171-43590190 | None:intergenic | 25.0% |
| !!! | ACTATTTTTCTAGTTGCATT+AGG | - | chr1_1:43590204-43590223 | Msa0023000:intron | 25.0% |
| !!! | AAGGTATGATTTGTGTTTTA+GGG | + | chr1_1:43590235-43590254 | None:intergenic | 25.0% |
| ! | AGAAGACTAATAAAAGAACA+AGG | + | chr1_1:43590254-43590273 | None:intergenic | 25.0% |
| !!! | AACACTCATTTTAAAACTGA+GGG | + | chr1_1:43590786-43590805 | None:intergenic | 25.0% |
| !!! | TAACACTCATTTTAAAACTG+AGG | + | chr1_1:43590787-43590806 | None:intergenic | 25.0% |
| ! | TAAAGGTAAGATTGGAAAAA+AGG | + | chr1_1:43590874-43590893 | None:intergenic | 25.0% |
| ! | CAACTTCCAAAATATCATAA+TGG | - | chr1_1:43590911-43590930 | Msa0023000:intron | 25.0% |
| !! | TTCAAAATGAATGTCGTTTA+AGG | + | chr1_1:43591026-43591045 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | - | chr1_1:43591027-43591046 | Msa0023000:CDS | 25.0% |
| !!! | AACGGAAAGAGTATTAATTT+TGG | - | chr1_1:43591045-43591064 | Msa0023000:CDS | 25.0% |
| ! | AAGCTTTTATGCTCTTAAGT+GGG | - | chr1_1:43589002-43589021 | Msa0023000:intron | 30.0% |
| GTGCATATAATTGTGGAAAA+TGG | + | chr1_1:43589115-43589134 | None:intergenic | 30.0% | |
| GTTGAAGTGATAAAATAGTG+AGG | + | chr1_1:43589521-43589540 | None:intergenic | 30.0% | |
| ATTAAATGGATCACTTCAAG+TGG | - | chr1_1:43589787-43589806 | Msa0023000:intron | 30.0% | |
| ! | CAAGTGGTTAATATGTTTTG+AGG | - | chr1_1:43589803-43589822 | Msa0023000:intron | 30.0% |
| GGGTGTAATTGATGAAAATA+AGG | + | chr1_1:43589981-43590000 | None:intergenic | 30.0% | |
| AGAAAAACAAAGCGTGTAAT+GGG | + | chr1_1:43590001-43590020 | None:intergenic | 30.0% | |
| AAGAAAAACAAAGCGTGTAA+TGG | + | chr1_1:43590002-43590021 | None:intergenic | 30.0% | |
| !!! | ATTACACGCTTTGTTTTTCT+TGG | - | chr1_1:43590001-43590020 | Msa0023000:intron | 30.0% |
| AATGGGTAATTGATCTACAA+AGG | - | chr1_1:43590035-43590054 | Msa0023000:intron | 30.0% | |
| ATGGGTAATTGATCTACAAA+GGG | - | chr1_1:43590036-43590055 | Msa0023000:intron | 30.0% | |
| GGAATTATTTGATAGGGTAT+AGG | + | chr1_1:43590098-43590117 | None:intergenic | 30.0% | |
| !!! | TATGATTTGTGTTTTAGGGA+GGG | + | chr1_1:43590231-43590250 | None:intergenic | 30.0% |
| !! | CAAGGTATGATTTGTGTTTT+AGG | + | chr1_1:43590236-43590255 | None:intergenic | 30.0% |
| ! | TAAAACATTTTCGCCAGATT+TGG | + | chr1_1:43590533-43590552 | None:intergenic | 30.0% |
| ! | ATGTTTTATCTAGCCAAATC+TGG | - | chr1_1:43590545-43590564 | Msa0023000:CDS | 30.0% |
| ! | ATGAACATTTTCACCAGATT+TGG | + | chr1_1:43590561-43590580 | None:intergenic | 30.0% |
| CTGGTGAAAATGTTCATTAA+TGG | - | chr1_1:43590564-43590583 | Msa0023000:intron | 30.0% | |
| ATGTTCATTAATGGAATTGC+AGG | - | chr1_1:43590573-43590592 | Msa0023000:intron | 30.0% | |
| !! | CAAGTTGATCTCTTAATCAT+GGG | - | chr1_1:43590664-43590683 | Msa0023000:intron | 30.0% |
| !! | ATAGTCTTGTTACATATTGG+TGG | + | chr1_1:43590942-43590961 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTCATTTTGGTGA+TGG | - | chr1_1:43591062-43591081 | Msa0023000:CDS | 30.0% |
| ! | AAGCTTTTATGCTCTTAAGT+GGG | - | chr1_1:43589002-43589021 | Msa0023000:intron | 30.0% |
| GTGCATATAATTGTGGAAAA+TGG | + | chr1_1:43589115-43589134 | None:intergenic | 30.0% | |
| GTTGAAGTGATAAAATAGTG+AGG | + | chr1_1:43589521-43589540 | None:intergenic | 30.0% | |
| ATTAAATGGATCACTTCAAG+TGG | - | chr1_1:43589787-43589806 | Msa0023000:intron | 30.0% | |
| ! | CAAGTGGTTAATATGTTTTG+AGG | - | chr1_1:43589803-43589822 | Msa0023000:intron | 30.0% |
| GGGTGTAATTGATGAAAATA+AGG | + | chr1_1:43589981-43590000 | None:intergenic | 30.0% | |
| AGAAAAACAAAGCGTGTAAT+GGG | + | chr1_1:43590001-43590020 | None:intergenic | 30.0% | |
| AAGAAAAACAAAGCGTGTAA+TGG | + | chr1_1:43590002-43590021 | None:intergenic | 30.0% | |
| !!! | ATTACACGCTTTGTTTTTCT+TGG | - | chr1_1:43590001-43590020 | Msa0023000:intron | 30.0% |
| AATGGGTAATTGATCTACAA+AGG | - | chr1_1:43590035-43590054 | Msa0023000:intron | 30.0% | |
| ATGGGTAATTGATCTACAAA+GGG | - | chr1_1:43590036-43590055 | Msa0023000:intron | 30.0% | |
| GGAATTATTTGATAGGGTAT+AGG | + | chr1_1:43590098-43590117 | None:intergenic | 30.0% | |
| !!! | TATGATTTGTGTTTTAGGGA+GGG | + | chr1_1:43590231-43590250 | None:intergenic | 30.0% |
| !! | CAAGGTATGATTTGTGTTTT+AGG | + | chr1_1:43590236-43590255 | None:intergenic | 30.0% |
| ! | TAAAACATTTTCGCCAGATT+TGG | + | chr1_1:43590533-43590552 | None:intergenic | 30.0% |
| ! | ATGTTTTATCTAGCCAAATC+TGG | - | chr1_1:43590545-43590564 | Msa0023000:CDS | 30.0% |
| ! | ATGAACATTTTCACCAGATT+TGG | + | chr1_1:43590561-43590580 | None:intergenic | 30.0% |
| CTGGTGAAAATGTTCATTAA+TGG | - | chr1_1:43590564-43590583 | Msa0023000:intron | 30.0% | |
| ATGTTCATTAATGGAATTGC+AGG | - | chr1_1:43590573-43590592 | Msa0023000:intron | 30.0% | |
| !! | CAAGTTGATCTCTTAATCAT+GGG | - | chr1_1:43590664-43590683 | Msa0023000:intron | 30.0% |
| !! | ATAGTCTTGTTACATATTGG+TGG | + | chr1_1:43590942-43590961 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTCATTTTGGTGA+TGG | - | chr1_1:43591062-43591081 | Msa0023000:CDS | 30.0% |
| AAAGAGAAGGATGAAGATGA+AGG | - | chr1_1:43588951-43588970 | Msa0023000:CDS | 35.0% | |
| ! | GAAGCTTTTATGCTCTTAAG+TGG | - | chr1_1:43589001-43589020 | Msa0023000:intron | 35.0% |
| AGGAACATCATCTGAAAATG+AGG | - | chr1_1:43589062-43589081 | Msa0023000:intron | 35.0% | |
| GGAACATCATCTGAAAATGA+GGG | - | chr1_1:43589063-43589082 | Msa0023000:intron | 35.0% | |
| ATCATCTGAAAATGAGGGAA+TGG | - | chr1_1:43589068-43589087 | Msa0023000:intron | 35.0% | |
| CAATAGGGTGCATATAATTG+TGG | + | chr1_1:43589122-43589141 | None:intergenic | 35.0% | |
| CACAATTATATGCACCCTAT+TGG | - | chr1_1:43589120-43589139 | Msa0023000:intron | 35.0% | |
| ! | GTGCTCAAGAAATTTGAGTT+TGG | - | chr1_1:43589825-43589844 | Msa0023000:intron | 35.0% |
| TTCTTGGTCAAAGCAGATAA+TGG | - | chr1_1:43590017-43590036 | Msa0023000:intron | 35.0% | |
| TCTTGGTCAAAGCAGATAAT+GGG | - | chr1_1:43590018-43590037 | Msa0023000:intron | 35.0% | |
| AAAAACTTAATGGGATGGGT+GGG | + | chr1_1:43590166-43590185 | None:intergenic | 35.0% | |
| !!! | GTATGATTTGTGTTTTAGGG+AGG | + | chr1_1:43590232-43590251 | None:intergenic | 35.0% |
| TCTCATATATGTCTTGCCTT+GGG | + | chr1_1:43590321-43590340 | None:intergenic | 35.0% | |
| TTCTCATATATGTCTTGCCT+TGG | + | chr1_1:43590322-43590341 | None:intergenic | 35.0% | |
| CCAGATTTGGCTAGATAATT+TGG | + | chr1_1:43590520-43590539 | None:intergenic | 35.0% | |
| CCAAATTATCTAGCCAAATC+TGG | - | chr1_1:43590517-43590536 | Msa0023000:CDS | 35.0% | |
| ! | GCAGAAAGTGTAATTCTCAA+TGG | - | chr1_1:43590601-43590620 | Msa0023000:intron | 35.0% |
| !! | GCAAGTTGATCTCTTAATCA+TGG | - | chr1_1:43590663-43590682 | Msa0023000:intron | 35.0% |
| !! | ATTTGGTGTAGAGCATTTCT+TGG | - | chr1_1:43591106-43591125 | Msa0023000:CDS | 35.0% |
| AAAGAGAAGGATGAAGATGA+AGG | - | chr1_1:43588951-43588970 | Msa0023000:CDS | 35.0% | |
| ! | GAAGCTTTTATGCTCTTAAG+TGG | - | chr1_1:43589001-43589020 | Msa0023000:intron | 35.0% |
| AGGAACATCATCTGAAAATG+AGG | - | chr1_1:43589062-43589081 | Msa0023000:intron | 35.0% | |
| GGAACATCATCTGAAAATGA+GGG | - | chr1_1:43589063-43589082 | Msa0023000:intron | 35.0% | |
| ATCATCTGAAAATGAGGGAA+TGG | - | chr1_1:43589068-43589087 | Msa0023000:intron | 35.0% | |
| CAATAGGGTGCATATAATTG+TGG | + | chr1_1:43589122-43589141 | None:intergenic | 35.0% | |
| CACAATTATATGCACCCTAT+TGG | - | chr1_1:43589120-43589139 | Msa0023000:intron | 35.0% | |
| ! | GTGCTCAAGAAATTTGAGTT+TGG | - | chr1_1:43589825-43589844 | Msa0023000:intron | 35.0% |
| TTCTTGGTCAAAGCAGATAA+TGG | - | chr1_1:43590017-43590036 | Msa0023000:intron | 35.0% | |
| TCTTGGTCAAAGCAGATAAT+GGG | - | chr1_1:43590018-43590037 | Msa0023000:intron | 35.0% | |
| AAAAACTTAATGGGATGGGT+GGG | + | chr1_1:43590166-43590185 | None:intergenic | 35.0% | |
| !!! | GTATGATTTGTGTTTTAGGG+AGG | + | chr1_1:43590232-43590251 | None:intergenic | 35.0% |
| TCTCATATATGTCTTGCCTT+GGG | + | chr1_1:43590321-43590340 | None:intergenic | 35.0% | |
| TTCTCATATATGTCTTGCCT+TGG | + | chr1_1:43590322-43590341 | None:intergenic | 35.0% | |
| CCAGATTTGGCTAGATAATT+TGG | + | chr1_1:43590520-43590539 | None:intergenic | 35.0% | |
| CCAAATTATCTAGCCAAATC+TGG | - | chr1_1:43590517-43590536 | Msa0023000:CDS | 35.0% | |
| ! | GCAGAAAGTGTAATTCTCAA+TGG | - | chr1_1:43590601-43590620 | Msa0023000:intron | 35.0% |
| !! | GCAAGTTGATCTCTTAATCA+TGG | - | chr1_1:43590663-43590682 | Msa0023000:intron | 35.0% |
| !! | ATTTGGTGTAGAGCATTTCT+TGG | - | chr1_1:43591106-43591125 | Msa0023000:CDS | 35.0% |
| !! | TGGAAGTGTTGATCAAGTGA+GGG | - | chr1_1:43588915-43588934 | Msa0023000:CDS | 40.0% |
| AAGGATGAAGATGAAGGTGA+TGG | - | chr1_1:43588957-43588976 | Msa0023000:CDS | 40.0% | |
| CTTCAACTTTATGACTGCCA+TGG | - | chr1_1:43589038-43589057 | Msa0023000:intron | 40.0% | |
| AACTTTATGACTGCCATGGA+AGG | - | chr1_1:43589042-43589061 | Msa0023000:intron | 40.0% | |
| TTCAGATGATGTTCCTTCCA+TGG | + | chr1_1:43589058-43589077 | None:intergenic | 40.0% | |
| ! | GCACGTTGAATTGAGACTTT+TGG | - | chr1_1:43589398-43589417 | Msa0023000:intron | 40.0% |
| ! | AGCTTTTTATCCAGCATCTG+TGG | - | chr1_1:43589541-43589560 | Msa0023000:intron | 40.0% |
| GTTGTGGATTCAGTGAAGAA+AGG | - | chr1_1:43589563-43589582 | Msa0023000:intron | 40.0% | |
| TAACTGCTGATCTTTCTTGC+TGG | + | chr1_1:43589589-43589608 | None:intergenic | 40.0% | |
| GATCAGCAGTTATTCTTTCG+CGG | - | chr1_1:43589597-43589616 | Msa0023000:intron | 40.0% | |
| ATCAGCAGTTATTCTTTCGC+GGG | - | chr1_1:43589598-43589617 | Msa0023000:intron | 40.0% | |
| GAGTAGAGGAAAGCGAAATT+AGG | + | chr1_1:43589661-43589680 | None:intergenic | 40.0% | |
| !! | GGTGGGTGTGATTTTGAAAA+GGG | + | chr1_1:43590149-43590168 | None:intergenic | 40.0% |
| GAAAAACTTAATGGGATGGG+TGG | + | chr1_1:43590167-43590186 | None:intergenic | 40.0% | |
| ATATATGTCTTGCCTTGGGT+GGG | + | chr1_1:43590317-43590336 | None:intergenic | 40.0% | |
| TAATTCTCAATGGAGACCCA+AGG | - | chr1_1:43590611-43590630 | Msa0023000:intron | 40.0% | |
| AATTCTCAATGGAGACCCAA+GGG | - | chr1_1:43590612-43590631 | Msa0023000:intron | 40.0% | |
| CCTGACAAATCATTTCCCTT+GGG | + | chr1_1:43590630-43590649 | None:intergenic | 40.0% | |
| TATTCTCATTGTGAAGCCAC+CGG | - | chr1_1:43591168-43591187 | Msa0023000:CDS | 40.0% | |
| !! | TGGAAGTGTTGATCAAGTGA+GGG | - | chr1_1:43588915-43588934 | Msa0023000:CDS | 40.0% |
| AAGGATGAAGATGAAGGTGA+TGG | - | chr1_1:43588957-43588976 | Msa0023000:CDS | 40.0% | |
| CTTCAACTTTATGACTGCCA+TGG | - | chr1_1:43589038-43589057 | Msa0023000:intron | 40.0% | |
| AACTTTATGACTGCCATGGA+AGG | - | chr1_1:43589042-43589061 | Msa0023000:intron | 40.0% | |
| TTCAGATGATGTTCCTTCCA+TGG | + | chr1_1:43589058-43589077 | None:intergenic | 40.0% | |
| ! | GCACGTTGAATTGAGACTTT+TGG | - | chr1_1:43589398-43589417 | Msa0023000:intron | 40.0% |
| ! | AGCTTTTTATCCAGCATCTG+TGG | - | chr1_1:43589541-43589560 | Msa0023000:intron | 40.0% |
| GTTGTGGATTCAGTGAAGAA+AGG | - | chr1_1:43589563-43589582 | Msa0023000:intron | 40.0% | |
| TAACTGCTGATCTTTCTTGC+TGG | + | chr1_1:43589589-43589608 | None:intergenic | 40.0% | |
| GATCAGCAGTTATTCTTTCG+CGG | - | chr1_1:43589597-43589616 | Msa0023000:intron | 40.0% | |
| ATCAGCAGTTATTCTTTCGC+GGG | - | chr1_1:43589598-43589617 | Msa0023000:intron | 40.0% | |
| GAGTAGAGGAAAGCGAAATT+AGG | + | chr1_1:43589661-43589680 | None:intergenic | 40.0% | |
| !! | GGTGGGTGTGATTTTGAAAA+GGG | + | chr1_1:43590149-43590168 | None:intergenic | 40.0% |
| GAAAAACTTAATGGGATGGG+TGG | + | chr1_1:43590167-43590186 | None:intergenic | 40.0% | |
| ATATATGTCTTGCCTTGGGT+GGG | + | chr1_1:43590317-43590336 | None:intergenic | 40.0% | |
| TAATTCTCAATGGAGACCCA+AGG | - | chr1_1:43590611-43590630 | Msa0023000:intron | 40.0% | |
| AATTCTCAATGGAGACCCAA+GGG | - | chr1_1:43590612-43590631 | Msa0023000:intron | 40.0% | |
| CCTGACAAATCATTTCCCTT+GGG | + | chr1_1:43590630-43590649 | None:intergenic | 40.0% | |
| TATTCTCATTGTGAAGCCAC+CGG | - | chr1_1:43591168-43591187 | Msa0023000:CDS | 40.0% | |
| !! | GTGGAAGTGTTGATCAAGTG+AGG | - | chr1_1:43588914-43588933 | Msa0023000:CDS | 45.0% |
| !! | GGAAGTGTTGATCAAGTGAG+GGG | - | chr1_1:43588916-43588935 | Msa0023000:CDS | 45.0% |
| GAGGTGCAGAAGAAAAGAGA+AGG | - | chr1_1:43588938-43588957 | Msa0023000:CDS | 45.0% | |
| ! | GATGAAGATGAAGGTGATGG+TGG | - | chr1_1:43588960-43588979 | Msa0023000:CDS | 45.0% |
| GTGGCAATAGATGAGAGTGA+TGG | - | chr1_1:43588979-43588998 | Msa0023000:intron | 45.0% | |
| TATATGCACCCTATTGGACC+AGG | - | chr1_1:43589126-43589145 | Msa0023000:intron | 45.0% | |
| ATGACCACGACGCAAATAAG+TGG | - | chr1_1:43589318-43589337 | Msa0023000:intron | 45.0% | |
| GCAAATAAGTGGAGGAGTCA+GGG | - | chr1_1:43589329-43589348 | Msa0023000:intron | 45.0% | |
| TTATCCAGCATCTGTGGTTG+TGG | - | chr1_1:43589547-43589566 | Msa0023000:intron | 45.0% | |
| GCAAATGTGCAAGGATAAGC+AGG | - | chr1_1:43589625-43589644 | Msa0023000:intron | 45.0% | |
| !! | GGGTGGGTGTGATTTTGAAA+AGG | + | chr1_1:43590150-43590169 | None:intergenic | 45.0% |
| ! | GGTGGGTTCACTTCTTAAGT+GGG | + | chr1_1:43590300-43590319 | None:intergenic | 45.0% |
| TTAAGAAGTGAACCCACCCA+AGG | - | chr1_1:43590302-43590321 | Msa0023000:intron | 45.0% | |
| CATATATGTCTTGCCTTGGG+TGG | + | chr1_1:43590318-43590337 | None:intergenic | 45.0% | |
| ! | CCCAAGGGAAATGATTTGTC+AGG | - | chr1_1:43590627-43590646 | Msa0023000:intron | 45.0% |
| GCCTGACAAATCATTTCCCT+TGG | + | chr1_1:43590631-43590650 | None:intergenic | 45.0% | |
| GGTGGCTTCACAATGAGAAT+AGG | + | chr1_1:43591169-43591188 | None:intergenic | 45.0% | |
| !! | TGCTTTTTATGGTGCTCCTC+CGG | + | chr1_1:43591190-43591209 | None:intergenic | 45.0% |
| !! | GTGGAAGTGTTGATCAAGTG+AGG | - | chr1_1:43588914-43588933 | Msa0023000:CDS | 45.0% |
| !! | GGAAGTGTTGATCAAGTGAG+GGG | - | chr1_1:43588916-43588935 | Msa0023000:CDS | 45.0% |
| GAGGTGCAGAAGAAAAGAGA+AGG | - | chr1_1:43588938-43588957 | Msa0023000:CDS | 45.0% | |
| ! | GATGAAGATGAAGGTGATGG+TGG | - | chr1_1:43588960-43588979 | Msa0023000:CDS | 45.0% |
| GTGGCAATAGATGAGAGTGA+TGG | - | chr1_1:43588979-43588998 | Msa0023000:intron | 45.0% | |
| TATATGCACCCTATTGGACC+AGG | - | chr1_1:43589126-43589145 | Msa0023000:intron | 45.0% | |
| ATGACCACGACGCAAATAAG+TGG | - | chr1_1:43589318-43589337 | Msa0023000:intron | 45.0% | |
| GCAAATAAGTGGAGGAGTCA+GGG | - | chr1_1:43589329-43589348 | Msa0023000:intron | 45.0% | |
| TTATCCAGCATCTGTGGTTG+TGG | - | chr1_1:43589547-43589566 | Msa0023000:intron | 45.0% | |
| GCAAATGTGCAAGGATAAGC+AGG | - | chr1_1:43589625-43589644 | Msa0023000:intron | 45.0% | |
| !! | GGGTGGGTGTGATTTTGAAA+AGG | + | chr1_1:43590150-43590169 | None:intergenic | 45.0% |
| ! | GGTGGGTTCACTTCTTAAGT+GGG | + | chr1_1:43590300-43590319 | None:intergenic | 45.0% |
| TTAAGAAGTGAACCCACCCA+AGG | - | chr1_1:43590302-43590321 | Msa0023000:intron | 45.0% | |
| CATATATGTCTTGCCTTGGG+TGG | + | chr1_1:43590318-43590337 | None:intergenic | 45.0% | |
| ! | CCCAAGGGAAATGATTTGTC+AGG | - | chr1_1:43590627-43590646 | Msa0023000:intron | 45.0% |
| GCCTGACAAATCATTTCCCT+TGG | + | chr1_1:43590631-43590650 | None:intergenic | 45.0% | |
| GGTGGCTTCACAATGAGAAT+AGG | + | chr1_1:43591169-43591188 | None:intergenic | 45.0% | |
| !! | TGCTTTTTATGGTGCTCCTC+CGG | + | chr1_1:43591190-43591209 | None:intergenic | 45.0% |
| !!! | AAGAATAAAAATTTTAAATT+TGG | + | chr1_1:43589903-43589922 | None:intergenic | 5.0% |
| !!! | AAGAATAAAAATTTTAAATT+TGG | + | chr1_1:43589903-43589922 | None:intergenic | 5.0% |
| !! | AGTGTTGATCAAGTGAGGGG+AGG | - | chr1_1:43588919-43588938 | Msa0023000:CDS | 50.0% |
| ACCACGACGCAAATAAGTGG+AGG | - | chr1_1:43589321-43589340 | Msa0023000:intron | 50.0% | |
| TCCTCCACTTATTTGCGTCG+TGG | + | chr1_1:43589325-43589344 | None:intergenic | 50.0% | |
| CGCAAATAAGTGGAGGAGTC+AGG | - | chr1_1:43589328-43589347 | Msa0023000:intron | 50.0% | |
| TTGGTCGGAGAATGTGATCC+GGG | + | chr1_1:43589361-43589380 | None:intergenic | 50.0% | |
| CTTGGTCGGAGAATGTGATC+CGG | + | chr1_1:43589362-43589381 | None:intergenic | 50.0% | |
| GAATCCACAACCACAGATGC+TGG | + | chr1_1:43589554-43589573 | None:intergenic | 50.0% | |
| ! | GGGTGGGTTCACTTCTTAAG+TGG | + | chr1_1:43590301-43590320 | None:intergenic | 50.0% |
| CTCTTAATCATGGGTAGCCG+TGG | - | chr1_1:43590673-43590692 | Msa0023000:intron | 50.0% | |
| !! | CTAACCTTTTGAGTGTGCCC+AGG | + | chr1_1:43590699-43590718 | None:intergenic | 50.0% |
| ! | TTTTTATGGTGCTCCTCCGG+TGG | + | chr1_1:43591187-43591206 | None:intergenic | 50.0% |
| !! | AGTGTTGATCAAGTGAGGGG+AGG | - | chr1_1:43588919-43588938 | Msa0023000:CDS | 50.0% |
| ACCACGACGCAAATAAGTGG+AGG | - | chr1_1:43589321-43589340 | Msa0023000:intron | 50.0% | |
| TCCTCCACTTATTTGCGTCG+TGG | + | chr1_1:43589325-43589344 | None:intergenic | 50.0% | |
| CGCAAATAAGTGGAGGAGTC+AGG | - | chr1_1:43589328-43589347 | Msa0023000:intron | 50.0% | |
| TTGGTCGGAGAATGTGATCC+GGG | + | chr1_1:43589361-43589380 | None:intergenic | 50.0% | |
| CTTGGTCGGAGAATGTGATC+CGG | + | chr1_1:43589362-43589381 | None:intergenic | 50.0% | |
| GAATCCACAACCACAGATGC+TGG | + | chr1_1:43589554-43589573 | None:intergenic | 50.0% | |
| ! | GGGTGGGTTCACTTCTTAAG+TGG | + | chr1_1:43590301-43590320 | None:intergenic | 50.0% |
| CTCTTAATCATGGGTAGCCG+TGG | - | chr1_1:43590673-43590692 | Msa0023000:intron | 50.0% | |
| !! | CTAACCTTTTGAGTGTGCCC+AGG | + | chr1_1:43590699-43590718 | None:intergenic | 50.0% |
| ! | TTTTTATGGTGCTCCTCCGG+TGG | + | chr1_1:43591187-43591206 | None:intergenic | 50.0% |
| ATGCACCCTATTGGACCAGG+TGG | - | chr1_1:43589129-43589148 | Msa0023000:intron | 55.0% | |
| CACCACCACCTGGTCCAATA+GGG | + | chr1_1:43589137-43589156 | None:intergenic | 55.0% | |
| AGATACGAACCACCACCACC+TGG | + | chr1_1:43589147-43589166 | None:intergenic | 55.0% | |
| !! | GAGGAGTCAGGGTTTTGACC+CGG | - | chr1_1:43589340-43589359 | Msa0023000:intron | 55.0% |
| GCGGGCTTTGCAAATGTGCA+AGG | - | chr1_1:43589616-43589635 | Msa0023000:intron | 55.0% | |
| !! | TTTTGAGTGTGCCCAGGCCA+CGG | + | chr1_1:43590693-43590712 | None:intergenic | 55.0% |
| TCTCATTGTGAAGCCACCGG+AGG | - | chr1_1:43591171-43591190 | Msa0023000:CDS | 55.0% | |
| ATGCACCCTATTGGACCAGG+TGG | - | chr1_1:43589129-43589148 | Msa0023000:intron | 55.0% | |
| CACCACCACCTGGTCCAATA+GGG | + | chr1_1:43589137-43589156 | None:intergenic | 55.0% | |
| AGATACGAACCACCACCACC+TGG | + | chr1_1:43589147-43589166 | None:intergenic | 55.0% | |
| !! | GAGGAGTCAGGGTTTTGACC+CGG | - | chr1_1:43589340-43589359 | Msa0023000:intron | 55.0% |
| GCGGGCTTTGCAAATGTGCA+AGG | - | chr1_1:43589616-43589635 | Msa0023000:intron | 55.0% | |
| !! | TTTTGAGTGTGCCCAGGCCA+CGG | + | chr1_1:43590693-43590712 | None:intergenic | 55.0% |
| TCTCATTGTGAAGCCACCGG+AGG | - | chr1_1:43591171-43591190 | Msa0023000:CDS | 55.0% | |
| CACCCTATTGGACCAGGTGG+TGG | - | chr1_1:43589132-43589151 | Msa0023000:intron | 60.0% | |
| CCACCACCACCTGGTCCAAT+AGG | + | chr1_1:43589138-43589157 | None:intergenic | 60.0% | |
| ! | CCTATTGGACCAGGTGGTGG+TGG | - | chr1_1:43589135-43589154 | Msa0023000:intron | 60.0% |
| AATCATGGGTAGCCGTGGCC+TGG | - | chr1_1:43590678-43590697 | Msa0023000:intron | 60.0% | |
| ATCATGGGTAGCCGTGGCCT+GGG | - | chr1_1:43590679-43590698 | Msa0023000:intron | 60.0% | |
| GTGGCCTGGGCACACTCAAA+AGG | - | chr1_1:43590692-43590711 | Msa0023000:intron | 60.0% | |
| CACCCTATTGGACCAGGTGG+TGG | - | chr1_1:43589132-43589151 | Msa0023000:intron | 60.0% | |
| CCACCACCACCTGGTCCAAT+AGG | + | chr1_1:43589138-43589157 | None:intergenic | 60.0% | |
| ! | CCTATTGGACCAGGTGGTGG+TGG | - | chr1_1:43589135-43589154 | Msa0023000:intron | 60.0% |
| AATCATGGGTAGCCGTGGCC+TGG | - | chr1_1:43590678-43590697 | Msa0023000:intron | 60.0% | |
| ATCATGGGTAGCCGTGGCCT+GGG | - | chr1_1:43590679-43590698 | Msa0023000:intron | 60.0% | |
| GTGGCCTGGGCACACTCAAA+AGG | - | chr1_1:43590692-43590711 | Msa0023000:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 43588901 | 43591213 | 43588901 | ID=Msa0023000;Name=Msa0023000 |
| chr1_1 | mRNA | 43588901 | 43591213 | 43588901 | ID=Msa0023000-mRNA-1;Parent=Msa0023000;Name=Msa0023000-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|4|0|191 |
| chr1_1 | exon | 43590958 | 43591213 | 43590958 | ID=Msa0023000-mRNA-1:exon:12632;Parent=Msa0023000-mRNA-1 |
| chr1_1 | exon | 43590468 | 43590571 | 43590468 | ID=Msa0023000-mRNA-1:exon:12631;Parent=Msa0023000-mRNA-1 |
| chr1_1 | exon | 43589401 | 43589519 | 43589401 | ID=Msa0023000-mRNA-1:exon:12630;Parent=Msa0023000-mRNA-1 |
| chr1_1 | exon | 43588901 | 43588997 | 43588901 | ID=Msa0023000-mRNA-1:exon:12629;Parent=Msa0023000-mRNA-1 |
| chr1_1 | CDS | 43590958 | 43591213 | 43590958 | ID=Msa0023000-mRNA-1:cds;Parent=Msa0023000-mRNA-1 |
| chr1_1 | CDS | 43590468 | 43590571 | 43590468 | ID=Msa0023000-mRNA-1:cds;Parent=Msa0023000-mRNA-1 |
| chr1_1 | CDS | 43589401 | 43589519 | 43589401 | ID=Msa0023000-mRNA-1:cds;Parent=Msa0023000-mRNA-1 |
| chr1_1 | CDS | 43588901 | 43588997 | 43588901 | ID=Msa0023000-mRNA-1:cds;Parent=Msa0023000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
