Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162130 | XP_039690808.1 | 94.350 | 177 | 10 | 0 | 21 | 197 | 1 | 177 | 1.10e-122 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162130 | sp|Q8LGG8|USPAL_ARATH | 30.851 | 94 | 65 | 0 | 95 | 188 | 69 | 162 | 1.99e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162130 | A0A072VK27 | 94.350 | 177 | 10 | 0 | 21 | 197 | 1 | 177 | 5.26e-123 | 354 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0162130 | 0.843955 | 1.019340e-58 | -8.615850e-47 |
| Msa0010490 | Msa0162130 | 0.827945 | 1.182092e-54 | -8.615850e-47 |
| Msa0010500 | Msa0162130 | 0.814133 | 1.799589e-51 | -8.615850e-47 |
| Msa0011960 | Msa0162130 | 0.854218 | 1.425161e-61 | -8.615850e-47 |
| Msa0015930 | Msa0162130 | 0.849634 | 2.850666e-60 | -8.615850e-47 |
| Msa0020390 | Msa0162130 | 0.845138 | 4.895586e-59 | -8.615850e-47 |
| Msa0020410 | Msa0162130 | 0.810402 | 1.173319e-50 | -8.615850e-47 |
| Msa0023000 | Msa0162130 | 0.892495 | 1.506454e-74 | -8.615850e-47 |
| Msa0023010 | Msa0162130 | 0.851822 | 6.906637e-61 | -8.615850e-47 |
| Msa0023040 | Msa0162130 | 0.824659 | 7.161385e-54 | -8.615850e-47 |
| Msa0023050 | Msa0162130 | 0.810149 | 1.330262e-50 | -8.615850e-47 |
| Msa0025730 | Msa0162130 | 0.814941 | 1.191895e-51 | -8.615850e-47 |
| Msa0026680 | Msa0162130 | 0.810608 | 1.059179e-50 | -8.615850e-47 |
| Msa0027260 | Msa0162130 | 0.829340 | 5.438638e-55 | -8.615850e-47 |
| Msa0027770 | Msa0162130 | 0.809443 | 1.887743e-50 | -8.615850e-47 |
| Msa0028660 | Msa0162130 | 0.823293 | 1.497887e-53 | -8.615850e-47 |
| Msa0029260 | Msa0162130 | 0.810974 | 8.827745e-51 | -8.615850e-47 |
| Msa0032580 | Msa0162130 | 0.826543 | 2.560955e-54 | -8.615850e-47 |
| Msa0033110 | Msa0162130 | 0.835625 | 1.504590e-56 | -8.615850e-47 |
| Msa0033260 | Msa0162130 | 0.829057 | 6.368270e-55 | -8.615850e-47 |
| Msa0047160 | Msa0162130 | 0.802622 | 5.140056e-49 | -8.615850e-47 |
| Msa0052770 | Msa0162130 | 0.808546 | 2.936754e-50 | -8.615850e-47 |
| Msa0054750 | Msa0162130 | 0.825796 | 3.855062e-54 | -8.615850e-47 |
| Msa0055180 | Msa0162130 | 0.838949 | 2.122219e-57 | -8.615850e-47 |
| Msa0058300 | Msa0162130 | 0.855025 | 8.319106e-62 | -8.615850e-47 |
| Msa0059040 | Msa0162130 | 0.820245 | 7.595373e-53 | -8.615850e-47 |
| Msa0059110 | Msa0162130 | 0.808105 | 3.647425e-50 | -8.615850e-47 |
| Msa0063530 | Msa0162130 | 0.807842 | 4.148169e-50 | -8.615850e-47 |
| Msa0065950 | Msa0162130 | 0.821871 | 3.206174e-53 | -8.615850e-47 |
| Msa0070860 | Msa0162130 | 0.849592 | 2.929981e-60 | -8.615850e-47 |
| Msa0070880 | Msa0162130 | 0.822645 | 2.120842e-53 | -8.615850e-47 |
| Msa0070920 | Msa0162130 | 0.851887 | 6.619937e-61 | -8.615850e-47 |
| Msa0075500 | Msa0162130 | 0.801132 | 1.040293e-48 | -8.615850e-47 |
| Msa0075960 | Msa0162130 | 0.820663 | 6.091356e-53 | -8.615850e-47 |
| Msa0076320 | Msa0162130 | 0.810031 | 1.411136e-50 | -8.615850e-47 |
| Msa0084940 | Msa0162130 | 0.814989 | 1.162877e-51 | -8.615850e-47 |
| Msa0089820 | Msa0162130 | 0.825920 | 3.601951e-54 | -8.615850e-47 |
| Msa0090520 | Msa0162130 | 0.806333 | 8.654310e-50 | -8.615850e-47 |
| Msa0090570 | Msa0162130 | 0.826379 | 2.801597e-54 | -8.615850e-47 |
| Msa0091410 | Msa0162130 | 0.831378 | 1.726551e-55 | -8.615850e-47 |
| Msa0094470 | Msa0162130 | 0.801059 | 1.076218e-48 | -8.615850e-47 |
| Msa0097780 | Msa0162130 | 0.814032 | 1.894388e-51 | -8.615850e-47 |
| Msa0100740 | Msa0162130 | 0.839123 | 1.912569e-57 | -8.615850e-47 |
| Msa0105620 | Msa0162130 | 0.822716 | 2.041718e-53 | -8.615850e-47 |
| Msa0112770 | Msa0162130 | 0.820209 | 7.739582e-53 | -8.615850e-47 |
| Msa0115190 | Msa0162130 | 0.822504 | 2.286918e-53 | -8.615850e-47 |
| Msa0115270 | Msa0162130 | 0.818623 | 1.779357e-52 | -8.615850e-47 |
| Msa0115390 | Msa0162130 | 0.825992 | 3.463972e-54 | -8.615850e-47 |
| Msa0118540 | Msa0162130 | 0.839411 | 1.609983e-57 | -8.615850e-47 |
| Msa0118780 | Msa0162130 | 0.873026 | 2.021611e-67 | -8.615850e-47 |
| Msa0118790 | Msa0162130 | 0.834548 | 2.812720e-56 | -8.615850e-47 |
| Msa0118810 | Msa0162130 | 0.900986 | 4.228797e-78 | -8.615850e-47 |
| Msa0127800 | Msa0162130 | 0.811724 | 6.067977e-51 | -8.615850e-47 |
| Msa0128660 | Msa0162130 | -0.804900 | 1.730207e-49 | -8.615850e-47 |
| Msa0129190 | Msa0162130 | -0.801898 | 7.244613e-49 | -8.615850e-47 |
| Msa0137990 | Msa0162130 | 0.804607 | 1.991441e-49 | -8.615850e-47 |
| Msa0138630 | Msa0162130 | 0.808037 | 3.770994e-50 | -8.615850e-47 |
| Msa0140110 | Msa0162130 | 0.812732 | 3.656257e-51 | -8.615850e-47 |
| Msa0140630 | Msa0162130 | 0.805188 | 1.505880e-49 | -8.615850e-47 |
| Msa0140650 | Msa0162130 | 0.815977 | 7.010536e-52 | -8.615850e-47 |
| Msa0140820 | Msa0162130 | 0.806191 | 9.270967e-50 | -8.615850e-47 |
| Msa0145160 | Msa0162130 | 0.819479 | 1.136457e-52 | -8.615850e-47 |
| Msa0145730 | Msa0162130 | 0.835842 | 1.326124e-56 | -8.615850e-47 |
| Msa0150820 | Msa0162130 | 0.800494 | 1.404042e-48 | -8.615850e-47 |
| Msa0156370 | Msa0162130 | 0.853739 | 1.957682e-61 | -8.615850e-47 |
| Msa0159170 | Msa0162130 | 0.827392 | 1.604368e-54 | -8.615850e-47 |
| Msa0159340 | Msa0162130 | 0.828586 | 8.279673e-55 | -8.615850e-47 |
| Msa0160550 | Msa0162130 | 0.804014 | 2.647134e-49 | -8.615850e-47 |
| Msa0162100 | Msa0162130 | 0.853464 | 2.348181e-61 | -8.615850e-47 |
| Msa0162120 | Msa0162130 | 0.849041 | 4.171005e-60 | -8.615850e-47 |
| Msa0162130 | Msa0162220 | 0.811413 | 7.087406e-51 | -8.615850e-47 |
| Msa0162130 | Msa0169300 | 0.808862 | 2.514580e-50 | -8.615850e-47 |
| Msa0162130 | Msa0172970 | 0.819179 | 1.330142e-52 | -8.615850e-47 |
| Msa0162130 | Msa0183850 | 0.836484 | 9.106352e-57 | -8.615850e-47 |
| Msa0162130 | Msa0189300 | 0.821746 | 3.427474e-53 | -8.615850e-47 |
| Msa0162130 | Msa0189520 | 0.878019 | 3.939514e-69 | -8.615850e-47 |
| Msa0162130 | Msa0190120 | 0.848627 | 5.432825e-60 | -8.615850e-47 |
| Msa0162130 | Msa0194480 | 0.819281 | 1.260837e-52 | -8.615850e-47 |
| Msa0162130 | Msa0204960 | 0.802401 | 5.709791e-49 | -8.615850e-47 |
| Msa0162130 | Msa0207670 | 0.801237 | 9.897508e-49 | -8.615850e-47 |
| Msa0162130 | Msa0209350 | 0.809246 | 2.079958e-50 | -8.615850e-47 |
| Msa0162130 | Msa0209500 | 0.842858 | 1.999829e-58 | -8.615850e-47 |
| Msa0162130 | Msa0220720 | 0.821268 | 4.420289e-53 | -8.615850e-47 |
| Msa0162130 | Msa0228070 | 0.828638 | 8.042949e-55 | -8.615850e-47 |
| Msa0162130 | Msa0229380 | 0.812106 | 5.009239e-51 | -8.615850e-47 |
| Msa0162130 | Msa0231660 | 0.805776 | 1.133568e-49 | -8.615850e-47 |
| Msa0162130 | Msa0231790 | 0.827279 | 1.707943e-54 | -8.615850e-47 |
| Msa0162130 | Msa0231980 | 0.821907 | 3.145142e-53 | -8.615850e-47 |
| Msa0162130 | Msa0232050 | 0.833134 | 6.349124e-56 | -8.615850e-47 |
| Msa0162130 | Msa0255080 | 0.815172 | 1.059494e-51 | -8.615850e-47 |
| Msa0162130 | Msa0256330 | 0.856260 | 3.627835e-62 | -8.615850e-47 |
| Msa0162130 | Msa0261550 | 0.801705 | 7.936601e-49 | -8.615850e-47 |
| Msa0162130 | Msa0262310 | 0.808603 | 2.856003e-50 | -8.615850e-47 |
| Msa0162130 | Msa0265430 | 0.818041 | 2.410777e-52 | -8.615850e-47 |
| Msa0162130 | Msa0271360 | 0.864993 | 8.147424e-65 | -8.615850e-47 |
| Msa0162130 | Msa0271890 | 0.847413 | 1.175033e-59 | -8.615850e-47 |
| Msa0162130 | Msa0274040 | -0.833342 | 5.635351e-56 | -8.615850e-47 |
| Msa0162130 | Msa0275000 | 0.803162 | 3.975812e-49 | -8.615850e-47 |
| Msa0162130 | Msa0281530 | 0.809421 | 1.908298e-50 | -8.615850e-47 |
| Msa0162130 | Msa0295330 | 0.857842 | 1.239389e-62 | -8.615850e-47 |
| Msa0162130 | Msa0299870 | 0.812025 | 5.216789e-51 | -8.615850e-47 |
| Msa0162130 | Msa0309750 | 0.813525 | 2.449856e-51 | -8.615850e-47 |
| Msa0162130 | Msa0309880 | 0.818356 | 2.045383e-52 | -8.615850e-47 |
| Msa0162130 | Msa0310860 | 0.847522 | 1.096447e-59 | -8.615850e-47 |
| Msa0162130 | Msa0326480 | 0.800144 | 1.654197e-48 | -8.615850e-47 |
| Msa0162130 | Msa0337240 | 0.836932 | 7.000484e-57 | -8.615850e-47 |
| Msa0162130 | Msa0337650 | 0.801801 | 7.586880e-49 | -8.615850e-47 |
| Msa0162130 | Msa0340380 | 0.827643 | 1.396525e-54 | -8.615850e-47 |
| Msa0162130 | Msa0345350 | 0.842472 | 2.532845e-58 | -8.615850e-47 |
| Msa0162130 | Msa0345390 | 0.821867 | 3.213212e-53 | -8.615850e-47 |
| Msa0162130 | Msa0357900 | 0.814868 | 1.237375e-51 | -8.615850e-47 |
| Msa0162130 | Msa0358860 | 0.817561 | 3.094437e-52 | -8.615850e-47 |
| Msa0162130 | Msa0366890 | 0.834704 | 2.569094e-56 | -8.615850e-47 |
| Msa0162130 | Msa0372340 | 0.804678 | 1.924557e-49 | -8.615850e-47 |
| Msa0162130 | Msa0377900 | -0.803073 | 4.147704e-49 | -8.615850e-47 |
| Msa0162130 | Msa0380100 | 0.816001 | 6.924106e-52 | -8.615850e-47 |
| Msa0162130 | Msa0383800 | 0.823291 | 1.499487e-53 | -8.615850e-47 |
| Msa0162130 | Msa0385580 | 0.812922 | 3.321401e-51 | -8.615850e-47 |
| Msa0162130 | Msa0387820 | 0.822881 | 1.868521e-53 | -8.615850e-47 |
| Msa0162130 | Msa0388700 | 0.828528 | 8.551336e-55 | -8.615850e-47 |
| Msa0162130 | Msa0395820 | 0.809390 | 1.937222e-50 | -8.615850e-47 |
| Msa0162130 | Msa0397540 | 0.850744 | 1.392761e-60 | -8.615850e-47 |
| Msa0162130 | Msa0402790 | 0.822414 | 2.399852e-53 | -8.615850e-47 |
| Msa0162130 | Msa0412840 | 0.805763 | 1.140624e-49 | -8.615850e-47 |
| Msa0162130 | Msa0414800 | 0.809952 | 1.467326e-50 | -8.615850e-47 |
| Msa0162130 | Msa0415430 | 0.809995 | 1.436293e-50 | -8.615850e-47 |
| Msa0162130 | Msa0423450 | -0.841962 | 3.455415e-58 | -8.615850e-47 |
| Msa0162130 | Msa0434180 | 0.814058 | 1.869471e-51 | -8.615850e-47 |
| Msa0162130 | Msa0457510 | 0.821233 | 4.501222e-53 | -8.615850e-47 |
| Msa0162130 | Msa0458060 | 0.820112 | 8.148236e-53 | -8.615850e-47 |
| Msa0162130 | Msa0460400 | -0.805077 | 1.588879e-49 | -8.615850e-47 |
| Msa0162130 | Msa0467380 | 0.825550 | 4.409507e-54 | -8.615850e-47 |
| Msa0162130 | Msa0469620 | -0.842256 | 2.889744e-58 | -8.615850e-47 |
| Msa0162130 | Msa0473830 | -0.820544 | 6.484997e-53 | -8.615850e-47 |
| Msa0162130 | Msa0481280 | 0.809559 | 1.782702e-50 | -8.615850e-47 |
| Msa0162130 | Msa0482130 | 0.808691 | 2.734494e-50 | -8.615850e-47 |
| Msa0162130 | Msa0485850 | 0.801194 | 1.010370e-48 | -8.615850e-47 |
| Msa0162130 | Msa0493410 | 0.835540 | 1.581660e-56 | -8.615850e-47 |
| Msa0162130 | Msa0496450 | 0.822580 | 2.195415e-53 | -8.615850e-47 |
| Msa0162130 | Msa0497210 | 0.842721 | 2.174835e-58 | -8.615850e-47 |
| Msa0162130 | Msa0506400 | 0.802312 | 5.955216e-49 | -8.615850e-47 |
| Msa0162130 | Msa0510840 | 0.822965 | 1.785881e-53 | -8.615850e-47 |
| Msa0162130 | Msa0512340 | 0.811040 | 8.540632e-51 | -8.615850e-47 |
| Msa0162130 | Msa0518070 | -0.816576 | 5.150375e-52 | -8.615850e-47 |
| Msa0162130 | Msa0519950 | 0.800408 | 1.461350e-48 | -8.615850e-47 |
| Msa0162130 | Msa0534900 | 0.865734 | 4.761909e-65 | -8.615850e-47 |
| Msa0162130 | Msa0542290 | 0.809497 | 1.837792e-50 | -8.615850e-47 |
| Msa0162130 | Msa0542560 | 0.806356 | 8.561770e-50 | -8.615850e-47 |
| Msa0162130 | Msa0548240 | 0.802385 | 5.753532e-49 | -8.615850e-47 |
| Msa0162130 | Msa0550120 | 0.819229 | 1.296218e-52 | -8.615850e-47 |
| Msa0162130 | Msa0555450 | 0.822929 | 1.821385e-53 | -8.615850e-47 |
| Msa0162130 | Msa0557480 | 0.821937 | 3.096155e-53 | -8.615850e-47 |
| Msa0162130 | Msa0568910 | 0.803581 | 3.255376e-49 | -8.615850e-47 |
| Msa0162130 | Msa0581110 | 0.806935 | 6.460644e-50 | -8.615850e-47 |
| Msa0162130 | Msa0581280 | 0.808119 | 3.622277e-50 | -8.615850e-47 |
| Msa0162130 | Msa0588260 | 0.863736 | 2.011963e-64 | -8.615850e-47 |
| Msa0162130 | Msa0589190 | 0.827930 | 1.191650e-54 | -8.615850e-47 |
| Msa0162130 | Msa0592440 | 0.819689 | 1.017734e-52 | -8.615850e-47 |
| Msa0162130 | Msa0604290 | 0.817696 | 2.884754e-52 | -8.615850e-47 |
| Msa0162130 | Msa0605650 | 0.851061 | 1.133930e-60 | -8.615850e-47 |
| Msa0162130 | Msa0610430 | 0.812333 | 4.469727e-51 | -8.615850e-47 |
| Msa0162130 | Msa0615490 | 0.812092 | 5.044102e-51 | -8.615850e-47 |
| Msa0162130 | Msa0620890 | 0.810346 | 1.206423e-50 | -8.615850e-47 |
| Msa0162130 | Msa0621640 | 0.808378 | 3.190097e-50 | -8.615850e-47 |
| Msa0162130 | Msa0623860 | 0.804343 | 2.261140e-49 | -8.615850e-47 |
| Msa0162130 | Msa0631350 | 0.850740 | 1.396830e-60 | -8.615850e-47 |
| Msa0162130 | Msa0646580 | 0.811713 | 6.100138e-51 | -8.615850e-47 |
| Msa0162130 | Msa0649220 | 0.810581 | 1.073585e-50 | -8.615850e-47 |
| Msa0162130 | Msa0660490 | 0.803354 | 3.628704e-49 | -8.615850e-47 |
| Msa0162130 | Msa0661210 | 0.807781 | 4.274183e-50 | -8.615850e-47 |
| Msa0162130 | Msa0661300 | 0.810181 | 1.309533e-50 | -8.615850e-47 |
| Msa0162130 | Msa0669720 | 0.832529 | 8.975637e-56 | -8.615850e-47 |
| Msa0162130 | Msa0669760 | 0.809985 | 1.443446e-50 | -8.615850e-47 |
| Msa0162130 | Msa0675410 | 0.800604 | 1.333446e-48 | -8.615850e-47 |
| Msa0162130 | Msa0682680 | 0.804752 | 1.857891e-49 | -8.615850e-47 |
| Msa0162130 | Msa0683600 | 0.812281 | 4.588244e-51 | -8.615850e-47 |
| Msa0162130 | Msa0686150 | 0.800604 | 1.333166e-48 | -8.615850e-47 |
| Msa0162130 | Msa0686210 | 0.823300 | 1.491994e-53 | -8.615850e-47 |
| Msa0162130 | Msa0688960 | 0.804909 | 1.722870e-49 | -8.615850e-47 |
| Msa0162130 | Msa0692830 | 0.816733 | 4.748876e-52 | -8.615850e-47 |
| Msa0162130 | Msa0692950 | 0.811568 | 6.561139e-51 | -8.615850e-47 |
| Msa0162130 | Msa0698540 | 0.835071 | 2.076810e-56 | -8.615850e-47 |
| Msa0162130 | Msa0717230 | -0.823056 | 1.700966e-53 | -8.615850e-47 |
| Msa0162130 | Msa0719420 | 0.812805 | 3.524171e-51 | -8.615850e-47 |
| Msa0162130 | Msa0722020 | 0.827094 | 1.891121e-54 | -8.615850e-47 |
| Msa0162130 | Msa0737600 | 0.824236 | 9.003257e-54 | -8.615850e-47 |
| Msa0162130 | Msa0738380 | 0.816989 | 4.159990e-52 | -8.615850e-47 |
| Msa0162130 | Msa0741230 | 0.803114 | 4.068385e-49 | -8.615850e-47 |
| Msa0162130 | Msa0743990 | 0.809103 | 2.232587e-50 | -8.615850e-47 |
| Msa0162130 | Msa0748170 | 0.821278 | 4.395201e-53 | -8.615850e-47 |
| Msa0162130 | Msa0763330 | 0.810535 | 1.098143e-50 | -8.615850e-47 |
| Msa0162130 | Msa0769980 | 0.834222 | 3.395059e-56 | -8.615850e-47 |
| Msa0162130 | Msa0771720 | 0.813721 | 2.217362e-51 | -8.615850e-47 |
| Msa0162130 | Msa0772480 | 0.814519 | 1.478046e-51 | -8.615850e-47 |
| Msa0162130 | Msa0784860 | 0.871989 | 4.486448e-67 | -8.615850e-47 |
| Msa0162130 | Msa0788540 | 0.812943 | 3.287079e-51 | -8.615850e-47 |
| Msa0162130 | Msa0789680 | 0.812631 | 3.847932e-51 | -8.615850e-47 |
| Msa0162130 | Msa0793380 | 0.847456 | 1.143454e-59 | -8.615850e-47 |
| Msa0162130 | Msa0798440 | 0.826906 | 2.097561e-54 | -8.615850e-47 |
| Msa0162130 | Msa0799680 | -0.802281 | 6.043262e-49 | -8.615850e-47 |
| Msa0162130 | Msa0800370 | 0.851066 | 1.130222e-60 | -8.615850e-47 |
| Msa0162130 | Msa0801110 | 0.827027 | 1.962232e-54 | -8.615850e-47 |
| Msa0162130 | Msa0802410 | 0.814301 | 1.652155e-51 | -8.615850e-47 |
| Msa0162130 | Msa0808080 | 0.816647 | 4.965550e-52 | -8.615850e-47 |
| Msa0162130 | Msa0817730 | 0.850382 | 1.760349e-60 | -8.615850e-47 |
| Msa0162130 | Msa0818750 | 0.842050 | 3.275404e-58 | -8.615850e-47 |
| Msa0162130 | Msa0830540 | 0.814187 | 1.750465e-51 | -8.615850e-47 |
| Msa0162130 | Msa0849030 | 0.844538 | 7.105691e-59 | -8.615850e-47 |
| Msa0162130 | Msa0858180 | 0.853948 | 1.704694e-61 | -8.615850e-47 |
| Msa0162130 | Msa0861130 | 0.801481 | 8.824062e-49 | -8.615850e-47 |
| Msa0162130 | Msa0861860 | 0.808813 | 2.575064e-50 | -8.615850e-47 |
| Msa0162130 | Msa0864290 | 0.809786 | 1.592631e-50 | -8.615850e-47 |
| Msa0162130 | Msa0867730 | 0.806271 | 8.919259e-50 | -8.615850e-47 |
| Msa0162130 | Msa0880730 | 0.804174 | 2.451875e-49 | -8.615850e-47 |
| Msa0162130 | Msa0887250 | 0.856626 | 2.832026e-62 | -8.615850e-47 |
| Msa0162130 | Msa0888260 | 0.800612 | 1.327915e-48 | -8.615850e-47 |
| Msa0162130 | Msa0927260 | 0.833161 | 6.251485e-56 | -8.615850e-47 |
| Msa0162130 | Msa0933380 | 0.823222 | 1.556114e-53 | -8.615850e-47 |
| Msa0162130 | Msa0942070 | 0.806646 | 7.433856e-50 | -8.615850e-47 |
| Msa0162130 | Msa0944610 | 0.802740 | 4.860456e-49 | -8.615850e-47 |
| Msa0162130 | Msa0958920 | 0.804198 | 2.424054e-49 | -8.615850e-47 |
| Msa0162130 | Msa0974810 | 0.802022 | 6.831622e-49 | -8.615850e-47 |
| Msa0162130 | Msa0974950 | 0.819417 | 1.174522e-52 | -8.615850e-47 |
| Msa0162130 | Msa0987370 | 0.840486 | 8.446905e-58 | -8.615850e-47 |
| Msa0162130 | Msa0993240 | 0.813273 | 2.782798e-51 | -8.615850e-47 |
| Msa0162130 | Msa0994370 | 0.836191 | 1.081121e-56 | -8.615850e-47 |
| Msa0162130 | Msa0999050 | -0.814579 | 1.433689e-51 | -8.615850e-47 |
| Msa0162130 | Msa0999430 | 0.806861 | 6.696077e-50 | -8.615850e-47 |
| Msa0162130 | Msa0999920 | 0.803930 | 2.755658e-49 | -8.615850e-47 |
| Msa0162130 | Msa0999970 | 0.804618 | 1.981075e-49 | -8.615850e-47 |
| Msa0162130 | Msa1006710 | 0.804862 | 1.762228e-49 | -8.615850e-47 |
| Msa0162130 | Msa1009820 | 0.802130 | 6.490530e-49 | -8.615850e-47 |
| Msa0162130 | Msa1029050 | 0.848081 | 7.690333e-60 | -8.615850e-47 |
| Msa0162130 | Msa1030620 | 0.858059 | 1.068112e-62 | -8.615850e-47 |
| Msa0162130 | Msa1037420 | 0.852438 | 4.617363e-61 | -8.615850e-47 |
| Msa0162130 | Msa1051200 | 0.835271 | 1.849652e-56 | -8.615850e-47 |
| Msa0162130 | Msa1063510 | 0.821264 | 4.428724e-53 | -8.615850e-47 |
| Msa0162130 | Msa1077030 | 0.841658 | 4.158800e-58 | -8.615850e-47 |
| Msa0162130 | Msa1081790 | -0.811246 | 7.706211e-51 | -8.615850e-47 |
| Msa0162130 | Msa1081930 | 0.826473 | 2.660835e-54 | -8.615850e-47 |
| Msa0162130 | Msa1087710 | 0.803420 | 3.515353e-49 | -8.615850e-47 |
| Msa0162130 | Msa1091940 | 0.831353 | 1.751800e-55 | -8.615850e-47 |
| Msa0162130 | Msa1093100 | 0.801726 | 7.860074e-49 | -8.615850e-47 |
| Msa0162130 | Msa1104210 | 0.801481 | 8.824883e-49 | -8.615850e-47 |
| Msa0162130 | Msa1107160 | 0.836560 | 8.711742e-57 | -8.615850e-47 |
| Msa0162130 | Msa1109680 | 0.831613 | 1.511455e-55 | -8.615850e-47 |
| Msa0162130 | Msa1115080 | 0.808924 | 2.439017e-50 | -8.615850e-47 |
| Msa0162130 | Msa1123810 | 0.829260 | 5.684655e-55 | -8.615850e-47 |
| Msa0162130 | Msa1126830 | 0.805928 | 1.053551e-49 | -8.615850e-47 |
| Msa0162130 | Msa1133230 | 0.829267 | 5.664249e-55 | -8.615850e-47 |
| Msa0162130 | Msa1133250 | 0.807063 | 6.067984e-50 | -8.615850e-47 |
| Msa0162130 | Msa1136540 | 0.802785 | 4.757362e-49 | -8.615850e-47 |
| Msa0162130 | Msa1137700 | 0.830156 | 3.441312e-55 | -8.615850e-47 |
| Msa0162130 | Msa1144040 | 0.814351 | 1.610274e-51 | -8.615850e-47 |
| Msa0162130 | Msa1160590 | 0.818491 | 1.906767e-52 | -8.615850e-47 |
| Msa0162130 | Msa1165780 | 0.821382 | 4.159466e-53 | -8.615850e-47 |
| Msa0162130 | Msa1166090 | -0.819322 | 1.234305e-52 | -8.615850e-47 |
| Msa0162130 | Msa1173140 | 0.808272 | 3.359989e-50 | -8.615850e-47 |
| Msa0162130 | Msa1174040 | 0.807031 | 6.165814e-50 | -8.615850e-47 |
| Msa0162130 | Msa1176710 | 0.801641 | 8.181783e-49 | -8.615850e-47 |
| Msa0162130 | Msa1180500 | 0.807682 | 4.486538e-50 | -8.615850e-47 |
| Msa0162130 | Msa1181250 | 0.829881 | 4.017103e-55 | -8.615850e-47 |
| Msa0162130 | Msa1181330 | 0.817742 | 2.816706e-52 | -8.615850e-47 |
| Msa0162130 | Msa1206270 | 0.831779 | 1.375808e-55 | -8.615850e-47 |
| Msa0162130 | Msa1206290 | 0.822046 | 2.920359e-53 | -8.615850e-47 |
| Msa0162130 | Msa1209200 | 0.805464 | 1.318317e-49 | -8.615850e-47 |
| Msa0162130 | Msa1210020 | 0.822902 | 1.847784e-53 | -8.615850e-47 |
| Msa0162130 | Msa1217650 | -0.803215 | 3.877178e-49 | -8.615850e-47 |
| Msa0162130 | Msa1218500 | 0.814417 | 1.556848e-51 | -8.615850e-47 |
| Msa0162130 | Msa1224810 | 0.815761 | 7.835342e-52 | -8.615850e-47 |
| Msa0162130 | Msa1231840 | 0.829799 | 4.204941e-55 | -8.615850e-47 |
| Msa0162130 | Msa1237940 | 0.802533 | 5.363923e-49 | -8.615850e-47 |
| Msa0162130 | Msa1242920 | -0.803297 | 3.727881e-49 | -8.615850e-47 |
| Msa0162130 | Msa1253800 | 0.838224 | 3.265188e-57 | -8.615850e-47 |
| Msa0162130 | Msa1254730 | 0.852504 | 4.420046e-61 | -8.615850e-47 |
| Msa0162130 | Msa1256810 | 0.807666 | 4.521981e-50 | -8.615850e-47 |
| Msa0162130 | Msa1261680 | -0.802859 | 4.593038e-49 | -8.615850e-47 |
| Msa0162130 | Msa1262720 | 0.807844 | 4.144509e-50 | -8.615850e-47 |
| Msa0162130 | Msa1265630 | 0.804300 | 2.307966e-49 | -8.615850e-47 |
| Msa0162130 | Msa1274560 | 0.851752 | 7.230669e-61 | -8.615850e-47 |
| Msa0162130 | Msa1275360 | 0.804409 | 2.190716e-49 | -8.615850e-47 |
| Msa0162130 | Msa1280340 | 0.835292 | 1.827068e-56 | -8.615850e-47 |
| Msa0162130 | Msa1294820 | 0.810649 | 1.037746e-50 | -8.615850e-47 |
| Msa0162130 | Msa1296830 | 0.853835 | 1.836817e-61 | -8.615850e-47 |
| Msa0162130 | Msa1298510 | 0.817732 | 2.831534e-52 | -8.615850e-47 |
| Msa0162130 | Msa1302850 | 0.822912 | 1.837225e-53 | -8.615850e-47 |
| Msa0162130 | Msa1312520 | 0.808986 | 2.365312e-50 | -8.615850e-47 |
| Msa0162130 | Msa1316360 | 0.813657 | 2.290419e-51 | -8.615850e-47 |
| Msa0162130 | Msa1332590 | 0.843339 | 1.488949e-58 | -8.615850e-47 |
| Msa0162130 | Msa1334880 | 0.807015 | 6.214337e-50 | -8.615850e-47 |
| Msa0162130 | Msa1336560 | 0.852620 | 4.097022e-61 | -8.615850e-47 |
| Msa0162130 | Msa1351540 | 0.830929 | 2.226572e-55 | -8.615850e-47 |
| Msa0162130 | Msa1359630 | 0.820485 | 6.691141e-53 | -8.615850e-47 |
| Msa0162130 | Msa1360140 | 0.813720 | 2.219328e-51 | -8.615850e-47 |
| Msa0162130 | Msa1361520 | 0.815854 | 7.468827e-52 | -8.615850e-47 |
| Msa0162130 | Msa1365800 | 0.806988 | 6.295563e-50 | -8.615850e-47 |
| Msa0162130 | Msa1368120 | 0.808007 | 3.826580e-50 | -8.615850e-47 |
| Msa0162130 | Msa1368530 | 0.814131 | 1.800652e-51 | -8.615850e-47 |
| Msa0162130 | Msa1385770 | 0.831727 | 1.417149e-55 | -8.615850e-47 |
| Msa0162130 | Msa1386780 | 0.807372 | 5.220859e-50 | -8.615850e-47 |
| Msa0162130 | Msa1394290 | 0.802814 | 4.692006e-49 | -8.615850e-47 |
| Msa0162130 | Msa1396400 | -0.815728 | 7.968449e-52 | -8.615850e-47 |
| Msa0162130 | Msa1400580 | 0.807099 | 5.964297e-50 | -8.615850e-47 |
| Msa0162130 | Msa1403340 | 0.823546 | 1.306619e-53 | -8.615850e-47 |
| Msa0162130 | Msa1409240 | 0.831093 | 2.028905e-55 | -8.615850e-47 |
| Msa0162130 | Msa1419870 | 0.828359 | 9.392126e-55 | -8.615850e-47 |
| Msa0162130 | Msa1422810 | 0.800013 | 1.758805e-48 | -8.615850e-47 |
| Msa0162130 | Msa1428880 | 0.800616 | 1.325767e-48 | -8.615850e-47 |
| Msa0162130 | Msa1431560 | -0.804227 | 2.389900e-49 | -8.615850e-47 |
| Msa0162130 | Msa1432420 | 0.811274 | 7.600661e-51 | -8.615850e-47 |
| Msa0162130 | Msa1434140 | 0.818153 | 2.274539e-52 | -8.615850e-47 |
| Msa0162130 | Msa1436520 | 0.830373 | 3.046924e-55 | -8.615850e-47 |
| Msa0162130 | Msa1439550 | 0.801197 | 1.008839e-48 | -8.615850e-47 |
| Msa0162130 | Msa1444310 | 0.804637 | 1.963286e-49 | -8.615850e-47 |
| Msa0162130 | Msa1451550 | 0.812862 | 3.423609e-51 | -8.615850e-47 |
| Msa0162130 | Msa1454480 | 0.811590 | 6.486679e-51 | -8.615850e-47 |
| Msa0162130 | Msa1454680 | 0.811317 | 7.436018e-51 | -8.615850e-47 |
| Msa0162130 | Msa1457920 | 0.825931 | 3.581080e-54 | -8.615850e-47 |
| Msa0162130 | Msa1458090 | 0.807419 | 5.102458e-50 | -8.615850e-47 |
| Msa0162130 | Msa1460320 | -0.825965 | 3.514336e-54 | -8.615850e-47 |
| Msa0162130 | Msa1462720 | 0.803304 | 3.716383e-49 | -8.615850e-47 |
| Msa0162130 | Msa1465960 | 0.811857 | 5.674709e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162130 | MtrunA17_Chr1g0176321 | 94.350 | 177 | 10 | 0 | 21 | 197 | 1 | 177 | 1.01e-126 | 354 |
| Msa0162130 | MtrunA17_Chr1g0176311 | 80.203 | 197 | 32 | 5 | 1 | 197 | 1 | 190 | 2.76e-110 | 313 |
| Msa0162130 | MtrunA17_Chr1g0192651 | 38.547 | 179 | 87 | 4 | 13 | 191 | 3 | 158 | 1.45e-34 | 120 |
| Msa0162130 | MtrunA17_Chr1g0195661 | 38.251 | 183 | 95 | 4 | 13 | 194 | 2 | 167 | 1.24e-33 | 117 |
| Msa0162130 | MtrunA17_Chr1g0194801 | 36.723 | 177 | 89 | 5 | 17 | 190 | 2 | 158 | 7.89e-32 | 112 |
| Msa0162130 | MtrunA17_Chr5g0427291 | 36.257 | 171 | 92 | 7 | 25 | 188 | 10 | 170 | 4.68e-28 | 103 |
| Msa0162130 | MtrunA17_Chr7g0269301 | 35.057 | 174 | 94 | 4 | 22 | 194 | 7 | 162 | 8.10e-24 | 92.4 |
| Msa0162130 | MtrunA17_Chr4g0032261 | 31.928 | 166 | 98 | 2 | 24 | 188 | 6 | 157 | 1.83e-19 | 81.3 |
| Msa0162130 | MtrunA17_Chr2g0323291 | 29.609 | 179 | 101 | 4 | 24 | 194 | 26 | 187 | 7.27e-19 | 80.9 |
| Msa0162130 | MtrunA17_Chr4g0001641 | 47.541 | 61 | 32 | 0 | 128 | 188 | 5 | 65 | 8.14e-18 | 74.3 |
| Msa0162130 | MtrunA17_Chr5g0433951 | 34.409 | 186 | 83 | 8 | 25 | 197 | 7 | 166 | 2.56e-17 | 75.5 |
| Msa0162130 | MtrunA17_Chr2g0294421 | 30.286 | 175 | 101 | 4 | 24 | 194 | 6 | 163 | 3.54e-17 | 75.1 |
| Msa0162130 | MtrunA17_Chr4g0008801 | 29.518 | 166 | 96 | 3 | 27 | 188 | 9 | 157 | 4.00e-15 | 69.7 |
| Msa0162130 | MtrunA17_Chr6g0450171 | 31.034 | 87 | 60 | 0 | 102 | 188 | 76 | 162 | 4.64e-15 | 69.7 |
| Msa0162130 | MtrunA17_Chr7g0240701 | 28.743 | 167 | 102 | 4 | 24 | 188 | 6 | 157 | 1.25e-13 | 65.9 |
| Msa0162130 | MtrunA17_Chr8g0361111 | 28.144 | 167 | 99 | 7 | 22 | 175 | 41 | 199 | 7.33e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162130 | AT3G11930.1 | 56.395 | 172 | 69 | 3 | 24 | 195 | 34 | 199 | 1.69e-67 | 205 |
| Msa0162130 | AT3G11930.2 | 55.233 | 172 | 72 | 2 | 24 | 195 | 34 | 200 | 1.27e-66 | 203 |
| Msa0162130 | AT3G11930.4 | 56.322 | 174 | 68 | 4 | 24 | 195 | 34 | 201 | 3.08e-66 | 202 |
| Msa0162130 | AT3G11930.3 | 47.980 | 198 | 72 | 3 | 24 | 195 | 34 | 226 | 1.63e-60 | 188 |
| Msa0162130 | AT3G58450.1 | 51.786 | 168 | 74 | 3 | 25 | 192 | 32 | 192 | 7.34e-54 | 171 |
| Msa0162130 | AT3G58450.2 | 50.595 | 168 | 69 | 3 | 25 | 192 | 32 | 185 | 3.15e-52 | 166 |
| Msa0162130 | AT1G09740.2 | 36.416 | 173 | 91 | 4 | 25 | 192 | 10 | 168 | 3.17e-31 | 112 |
| Msa0162130 | AT1G09740.1 | 36.416 | 173 | 91 | 4 | 25 | 192 | 10 | 168 | 3.17e-31 | 112 |
| Msa0162130 | AT2G47710.1 | 34.503 | 171 | 93 | 4 | 22 | 191 | 7 | 159 | 3.34e-29 | 106 |
| Msa0162130 | AT3G62550.1 | 35.928 | 167 | 87 | 4 | 24 | 188 | 8 | 156 | 3.60e-28 | 103 |
| Msa0162130 | AT1G68300.1 | 33.714 | 175 | 96 | 3 | 15 | 188 | 2 | 157 | 7.89e-26 | 97.8 |
| Msa0162130 | AT3G01520.1 | 30.851 | 94 | 65 | 0 | 95 | 188 | 69 | 162 | 2.02e-16 | 73.9 |
| Msa0162130 | AT3G03270.2 | 31.148 | 183 | 75 | 5 | 25 | 188 | 7 | 157 | 2.19e-16 | 73.2 |
| Msa0162130 | AT5G14680.1 | 30.851 | 94 | 65 | 0 | 95 | 188 | 69 | 162 | 7.72e-16 | 72.4 |
| Msa0162130 | AT3G17020.1 | 30.636 | 173 | 92 | 5 | 24 | 188 | 8 | 160 | 1.19e-15 | 71.6 |
| Msa0162130 | AT1G11360.2 | 28.090 | 178 | 104 | 5 | 22 | 192 | 37 | 197 | 4.05e-15 | 71.6 |
| Msa0162130 | AT1G11360.1 | 28.090 | 178 | 104 | 5 | 22 | 192 | 37 | 197 | 4.05e-15 | 71.6 |
| Msa0162130 | AT1G11360.4 | 28.090 | 178 | 104 | 5 | 22 | 192 | 37 | 197 | 4.05e-15 | 71.6 |
| Msa0162130 | AT1G11360.3 | 28.090 | 178 | 104 | 5 | 22 | 192 | 37 | 197 | 4.05e-15 | 71.6 |
| Msa0162130 | AT3G53990.1 | 28.655 | 171 | 97 | 4 | 27 | 191 | 9 | 160 | 4.79e-14 | 67.0 |
Find 53 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTATGGCTACTGTTACTA+TGG | 0.183037 | 1_4:-38493451 | Msa0162130:CDS |
| GCAGAAAGTGTGATTCTTAA+TGG | 0.228368 | 1_4:-38491479 | Msa0162130:CDS |
| TATGCATAAGTGTGGAAATT+TGG | 0.264690 | 1_4:+38493375 | None:intergenic |
| TTCAAAGAATCTGCAACTTC+AGG | 0.297788 | 1_4:+38492935 | None:intergenic |
| CCAGCTGGTCCCATAGGTAT+AGG | 0.340250 | 1_4:+38493351 | None:intergenic |
| CTTCTGCACCTCCCCTCACT+TGG | 0.373335 | 1_4:+38493568 | None:intergenic |
| TGATAACCTCTTCAACGTTA+TGG | 0.381044 | 1_4:-38493466 | Msa0162130:CDS |
| GCAAGTTGATCTCTTAATCA+TGG | 0.412365 | 1_4:-38491417 | Msa0162130:CDS |
| CAGCTGGTCCCATAGGTATA+GGG | 0.428625 | 1_4:+38493352 | None:intergenic |
| TCTGCAACTTCAGGTGTTGA+TGG | 0.429179 | 1_4:+38492944 | None:intergenic |
| ATCATGGGTAGTCGTGGCCT+TGG | 0.451807 | 1_4:-38491401 | Msa0162130:CDS |
| CCTATGGGACCAGCTGGTAT+TGG | 0.470932 | 1_4:-38493345 | Msa0162130:intron |
| TTATGCATACCCTATACCTA+TGG | 0.478213 | 1_4:-38493361 | Msa0162130:CDS |
| ATCTGCAGCTATTGCCTCAC+GGG | 0.482712 | 1_4:-38492894 | Msa0162130:CDS |
| TGCAAGAGAAATGATTTGTC+AGG | 0.490363 | 1_4:-38491453 | Msa0162130:CDS |
| GAAGCTTGTATGCTCTTAAG+TGG | 0.498753 | 1_4:-38493494 | Msa0162130:CDS |
| ATGGCTACTGTTACTATGGA+TGG | 0.500858 | 1_4:-38493447 | Msa0162130:CDS |
| GTGGCCTTGGCAAACTCAAA+AGG | 0.501962 | 1_4:-38491388 | Msa0162130:intron |
| GGTGGCTTCACAATGAGAAT+AGG | 0.504003 | 1_4:+38491200 | None:intergenic |
| TTTGGTGGCAGAGCATTCCT+TGG | 0.514690 | 1_4:-38491260 | Msa0162130:intron |
| CCAATACCAGCTGGTCCCAT+AGG | 0.522576 | 1_4:+38493345 | None:intergenic |
| AAAGAGAAGGATGAAGATGA+AGG | 0.523647 | 1_4:-38493544 | Msa0162130:CDS |
| TAACGTTGAAGAGGTTATCA+AGG | 0.523668 | 1_4:+38493469 | None:intergenic |
| ATCTGAAAATGAGGAGGGGA+TGG | 0.523730 | 1_4:-38493418 | Msa0162130:CDS |
| GCAAATGTGCAAGGACAAGC+AGG | 0.531005 | 1_4:-38492867 | Msa0162130:intron |
| CTCTTAATCATGGGTAGTCG+TGG | 0.541714 | 1_4:-38491407 | Msa0162130:CDS |
| AAAAGGGTGATGGAGGAAGT+AGG | 0.547069 | 1_4:-38493603 | None:intergenic |
| AATAGTCACTTACACTTCCA+AGG | 0.548894 | 1_4:+38491243 | None:intergenic |
| TGGAACAACATCTGAAAATG+AGG | 0.557443 | 1_4:-38493427 | Msa0162130:CDS |
| CAAGTTGATCTCTTAATCAT+GGG | 0.558572 | 1_4:-38491416 | Msa0162130:CDS |
| CAGTAGCCATAACGTTGAAG+AGG | 0.566949 | 1_4:+38493460 | None:intergenic |
| CCTATACCTATGGGACCAGC+TGG | 0.573743 | 1_4:-38493351 | Msa0162130:CDS |
| GTGGAAGTGTTGACCAAGTG+AGG | 0.578339 | 1_4:-38493581 | Msa0162130:CDS |
| TGGAAGTGTTGACCAAGTGA+GGG | 0.581251 | 1_4:-38493580 | Msa0162130:CDS |
| GAGGTGCAGAAGAAAAGAGA+AGG | 0.584561 | 1_4:-38493557 | Msa0162130:CDS |
| TATGCATACCCTATACCTAT+GGG | 0.588273 | 1_4:-38493360 | Msa0162130:CDS |
| AATCTGCAGCTATTGCCTCA+CGG | 0.590946 | 1_4:-38492895 | Msa0162130:CDS |
| GTATAGGGTATGCATAAGTG+TGG | 0.596401 | 1_4:+38493367 | None:intergenic |
| ACGGGCTTTGCAAATGTGCA+AGG | 0.602324 | 1_4:-38492876 | Msa0162130:CDS |
| GATGAAGATGAAGGTGATGG+TGG | 0.605709 | 1_4:-38493535 | Msa0162130:CDS |
| ATATACTAACCAATACCAGC+TGG | 0.608648 | 1_4:+38493336 | None:intergenic |
| ACAACATCTGAAAATGAGGA+GGG | 0.619877 | 1_4:-38493423 | Msa0162130:CDS |
| AACAACATCTGAAAATGAGG+AGG | 0.624375 | 1_4:-38493424 | Msa0162130:CDS |
| AACGTTGAAGAGGTTATCAA+GGG | 0.625008 | 1_4:+38493470 | None:intergenic |
| AGGGTGATGGAGGAAGTAGG+TGG | 0.640246 | 1_4:-38493600 | None:intergenic |
| AAGGATGAAGATGAAGGTGA+TGG | 0.645453 | 1_4:-38493538 | Msa0162130:CDS |
| AAGCTTGTATGCTCTTAAGT+GGG | 0.653871 | 1_4:-38493493 | Msa0162130:CDS |
| GTGGCAATAGATGAGAGTGA+TGG | 0.658459 | 1_4:-38493516 | Msa0162130:CDS |
| CAACATCTGAAAATGAGGAG+GGG | 0.662503 | 1_4:-38493422 | Msa0162130:CDS |
| GCACATTTGCAAAGCCCGTG+AGG | 0.665936 | 1_4:+38492880 | None:intergenic |
| GGAAGTGTTGACCAAGTGAG+GGG | 0.668841 | 1_4:-38493579 | Msa0162130:CDS |
| TCTCATTGTGAAGCCACCAG+AGG | 0.677993 | 1_4:-38491195 | Msa0162130:CDS |
| AGTGTTGACCAAGTGAGGGG+AGG | 0.708592 | 1_4:-38493576 | Msa0162130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTAACTATTTTTTTTTAT+TGG | - | chr1_4:38492635-38492654 | Msa0162130:intron | 10.0% |
| !!! | ATCTTTTTTTTTTTTTTTTG+AGG | - | chr1_4:38492878-38492897 | Msa0162130:CDS | 10.0% |
| !!! | TAGTAACTATTTTTTTTTAT+TGG | - | chr1_4:38492635-38492654 | Msa0162130:intron | 10.0% |
| !!! | ATCTTTTTTTTTTTTTTTTG+AGG | - | chr1_4:38492878-38492897 | Msa0162130:CDS | 10.0% |
| !!! | TCTAGTTTTTAATAGATAAA+AGG | + | chr1_4:38491493-38491512 | None:intergenic | 15.0% |
| !!! | TTGTATTTATTTTAGTATAG+AGG | + | chr1_4:38492206-38492225 | None:intergenic | 15.0% |
| !! | AATAGGATAAATTAAATGAA+GGG | + | chr1_4:38492233-38492252 | None:intergenic | 15.0% |
| !! | AAATAATGACATTAATGAAT+AGG | + | chr1_4:38492250-38492269 | None:intergenic | 15.0% |
| !!! | ATCTCATGATTTTTTTTTTT+AGG | - | chr1_4:38492448-38492467 | Msa0162130:intron | 15.0% |
| !!! | TCTCATGATTTTTTTTTTTA+GGG | - | chr1_4:38492449-38492468 | Msa0162130:intron | 15.0% |
| !!! | AACTAAAATATTTTCTTTGA+CGG | - | chr1_4:38492791-38492810 | Msa0162130:intron | 15.0% |
| !!! | ACTAGATTTTTTTTTTTTGA+AGG | + | chr1_4:38493148-38493167 | None:intergenic | 15.0% |
| !!! | TAAATTATGGCTTTTAAATT+TGG | - | chr1_4:38493200-38493219 | Msa0162130:intron | 15.0% |
| !!! | GTTCTAATATTTTTTACATT+TGG | - | chr1_4:38493491-38493510 | Msa0162130:CDS | 15.0% |
| !!! | TCTAGTTTTTAATAGATAAA+AGG | + | chr1_4:38491493-38491512 | None:intergenic | 15.0% |
| !!! | TTGTATTTATTTTAGTATAG+AGG | + | chr1_4:38492206-38492225 | None:intergenic | 15.0% |
| !! | AATAGGATAAATTAAATGAA+GGG | + | chr1_4:38492233-38492252 | None:intergenic | 15.0% |
| !! | AAATAATGACATTAATGAAT+AGG | + | chr1_4:38492250-38492269 | None:intergenic | 15.0% |
| !!! | ATCTCATGATTTTTTTTTTT+AGG | - | chr1_4:38492448-38492467 | Msa0162130:intron | 15.0% |
| !!! | TCTCATGATTTTTTTTTTTA+GGG | - | chr1_4:38492449-38492468 | Msa0162130:intron | 15.0% |
| !!! | AACTAAAATATTTTCTTTGA+CGG | - | chr1_4:38492791-38492810 | Msa0162130:intron | 15.0% |
| !!! | ACTAGATTTTTTTTTTTTGA+AGG | + | chr1_4:38493148-38493167 | None:intergenic | 15.0% |
| !!! | TAAATTATGGCTTTTAAATT+TGG | - | chr1_4:38493200-38493219 | Msa0162130:intron | 15.0% |
| !!! | GTTCTAATATTTTTTACATT+TGG | - | chr1_4:38493491-38493510 | Msa0162130:CDS | 15.0% |
| !! | TCTATTAAAAACTAGAACAA+TGG | - | chr1_4:38491497-38491516 | Msa0162130:intron | 20.0% |
| !! | AAAAATGATGTAACTTTGTA+AGG | - | chr1_4:38491596-38491615 | Msa0162130:intron | 20.0% |
| !!! | TTAATATTGTCCATTTTTCT+TGG | - | chr1_4:38491626-38491645 | Msa0162130:intron | 20.0% |
| !! | TTTCATGATATACAGAAAAT+AGG | - | chr1_4:38492116-38492135 | Msa0162130:intron | 20.0% |
| !! | TTCATGATATACAGAAAATA+GGG | - | chr1_4:38492117-38492136 | Msa0162130:intron | 20.0% |
| !! | GAATAGGATAAATTAAATGA+AGG | + | chr1_4:38492234-38492253 | None:intergenic | 20.0% |
| !! | ATTCATGATACAAAAATGAA+AGG | + | chr1_4:38492518-38492537 | None:intergenic | 20.0% |
| !!! | TGAATCACACTTTTTTTTTA+TGG | - | chr1_4:38492533-38492552 | Msa0162130:intron | 20.0% |
| !!! | ACTTTTTTTTTATGGACTTA+TGG | - | chr1_4:38492541-38492560 | Msa0162130:intron | 20.0% |
| !!! | GTGATGATGTTTTAAAAATT+CGG | - | chr1_4:38493166-38493185 | Msa0162130:intron | 20.0% |
| !!! | ATTTTGATTTCATTTATGCA+TGG | - | chr1_4:38493462-38493481 | Msa0162130:CDS | 20.0% |
| !!! | CTAATATTTTTTACATTTGG+TGG | - | chr1_4:38493494-38493513 | Msa0162130:CDS | 20.0% |
| !! | TCTATTAAAAACTAGAACAA+TGG | - | chr1_4:38491497-38491516 | Msa0162130:intron | 20.0% |
| !! | AAAAATGATGTAACTTTGTA+AGG | - | chr1_4:38491596-38491615 | Msa0162130:intron | 20.0% |
| !!! | TTAATATTGTCCATTTTTCT+TGG | - | chr1_4:38491626-38491645 | Msa0162130:intron | 20.0% |
| !! | TTTCATGATATACAGAAAAT+AGG | - | chr1_4:38492116-38492135 | Msa0162130:intron | 20.0% |
| !! | TTCATGATATACAGAAAATA+GGG | - | chr1_4:38492117-38492136 | Msa0162130:intron | 20.0% |
| !! | GAATAGGATAAATTAAATGA+AGG | + | chr1_4:38492234-38492253 | None:intergenic | 20.0% |
| !! | ATTCATGATACAAAAATGAA+AGG | + | chr1_4:38492518-38492537 | None:intergenic | 20.0% |
| !!! | TGAATCACACTTTTTTTTTA+TGG | - | chr1_4:38492533-38492552 | Msa0162130:intron | 20.0% |
| !!! | ACTTTTTTTTTATGGACTTA+TGG | - | chr1_4:38492541-38492560 | Msa0162130:intron | 20.0% |
| !!! | GTGATGATGTTTTAAAAATT+CGG | - | chr1_4:38493166-38493185 | Msa0162130:intron | 20.0% |
| !!! | ATTTTGATTTCATTTATGCA+TGG | - | chr1_4:38493462-38493481 | Msa0162130:CDS | 20.0% |
| !!! | CTAATATTTTTTACATTTGG+TGG | - | chr1_4:38493494-38493513 | Msa0162130:CDS | 20.0% |
| ! | AATTATGAGAGAATTAGACA+TGG | + | chr1_4:38491573-38491592 | None:intergenic | 25.0% |
| ! | ATTTCCCATTCATTTGTATT+GGG | + | chr1_4:38492064-38492083 | None:intergenic | 25.0% |
| ! | AATTTCCCATTCATTTGTAT+TGG | + | chr1_4:38492065-38492084 | None:intergenic | 25.0% |
| ! | TCATGATATACAGAAAATAG+GGG | - | chr1_4:38492118-38492137 | Msa0162130:intron | 25.0% |
| !!! | AAAGGAAGATGATTACTTTT+TGG | + | chr1_4:38492145-38492164 | None:intergenic | 25.0% |
| ! | TGTTTCGAATTTCAATTATC+TGG | + | chr1_4:38492299-38492318 | None:intergenic | 25.0% |
| ! | TTCTCGTAGACAATATAATT+TGG | + | chr1_4:38492413-38492432 | None:intergenic | 25.0% |
| !! | TATAGGTTGAGCAATTATAT+AGG | - | chr1_4:38492697-38492716 | Msa0162130:intron | 25.0% |
| ! | AATTATGAGAGAATTAGACA+TGG | + | chr1_4:38491573-38491592 | None:intergenic | 25.0% |
| ! | ATTTCCCATTCATTTGTATT+GGG | + | chr1_4:38492064-38492083 | None:intergenic | 25.0% |
| ! | AATTTCCCATTCATTTGTAT+TGG | + | chr1_4:38492065-38492084 | None:intergenic | 25.0% |
| ! | TCATGATATACAGAAAATAG+GGG | - | chr1_4:38492118-38492137 | Msa0162130:intron | 25.0% |
| !!! | AAAGGAAGATGATTACTTTT+TGG | + | chr1_4:38492145-38492164 | None:intergenic | 25.0% |
| ! | TGTTTCGAATTTCAATTATC+TGG | + | chr1_4:38492299-38492318 | None:intergenic | 25.0% |
| ! | TTCTCGTAGACAATATAATT+TGG | + | chr1_4:38492413-38492432 | None:intergenic | 25.0% |
| !! | TATAGGTTGAGCAATTATAT+AGG | - | chr1_4:38492697-38492716 | Msa0162130:intron | 25.0% |
| TATGCATAAGTGTGGAAATT+TGG | + | chr1_4:38491397-38491416 | None:intergenic | 30.0% | |
| ATGATGTAACTTTGTAAGGT+TGG | - | chr1_4:38491600-38491619 | Msa0162130:intron | 30.0% | |
| TTAACTTACACAGATGTATC+GGG | + | chr1_4:38491706-38491725 | None:intergenic | 30.0% | |
| CTTAACTTACACAGATGTAT+CGG | + | chr1_4:38491707-38491726 | None:intergenic | 30.0% | |
| ! | CAAAGTATCACACAAGAAAA+AGG | + | chr1_4:38491785-38491804 | None:intergenic | 30.0% |
| ATGGATAAAAAGCTGTTGAA+AGG | + | chr1_4:38491809-38491828 | None:intergenic | 30.0% | |
| TTGTTCATTCCTTTATCTGA+TGG | - | chr1_4:38491998-38492017 | Msa0162130:intron | 30.0% | |
| TGTTCATTCCTTTATCTGAT+GGG | - | chr1_4:38491999-38492018 | Msa0162130:intron | 30.0% | |
| ATTAACTACCCATCAGATAA+AGG | + | chr1_4:38492010-38492029 | None:intergenic | 30.0% | |
| TAACTCCCAATACAAATGAA+TGG | - | chr1_4:38492056-38492075 | Msa0162130:intron | 30.0% | |
| AACTCCCAATACAAATGAAT+GGG | - | chr1_4:38492057-38492076 | Msa0162130:intron | 30.0% | |
| CATGATATACAGAAAATAGG+GGG | - | chr1_4:38492119-38492138 | Msa0162130:intron | 30.0% | |
| ! | GAAAGGAAGATTTTCTTTTG+AGG | + | chr1_4:38492178-38492197 | None:intergenic | 30.0% |
| TTAGTATAGAGGAAAGTGAA+AGG | + | chr1_4:38492195-38492214 | None:intergenic | 30.0% | |
| CAGGATAGTAGTAAAATCAA+TGG | - | chr1_4:38492335-38492354 | Msa0162130:intron | 30.0% | |
| TCTATTCCAAATCATGAGAT+TGG | + | chr1_4:38492477-38492496 | None:intergenic | 30.0% | |
| CTTACGTTACGTTCTTATAT+AGG | - | chr1_4:38492680-38492699 | Msa0162130:intron | 30.0% | |
| ! | ACGGAAGTGTATAAAATCTA+TGG | - | chr1_4:38492810-38492829 | Msa0162130:intron | 30.0% |
| ! | CGGAAGTGTATAAAATCTAT+GGG | - | chr1_4:38492811-38492830 | Msa0162130:intron | 30.0% |
| GGTAGATGCTACATAAATTA+TGG | - | chr1_4:38493187-38493206 | Msa0162130:intron | 30.0% | |
| ATGCATACTTTCATTGGATT+TGG | + | chr1_4:38493250-38493269 | None:intergenic | 30.0% | |
| TCATTGATGCATACTTTCAT+TGG | + | chr1_4:38493256-38493275 | None:intergenic | 30.0% | |
| !! | CAAGTTGATCTCTTAATCAT+GGG | - | chr1_4:38493353-38493372 | Msa0162130:CDS | 30.0% |
| TTTCATTTATGCATGGTTGA+TGG | - | chr1_4:38493469-38493488 | Msa0162130:CDS | 30.0% | |
| TATGCATAAGTGTGGAAATT+TGG | + | chr1_4:38491397-38491416 | None:intergenic | 30.0% | |
| ATGATGTAACTTTGTAAGGT+TGG | - | chr1_4:38491600-38491619 | Msa0162130:intron | 30.0% | |
| TTAACTTACACAGATGTATC+GGG | + | chr1_4:38491706-38491725 | None:intergenic | 30.0% | |
| CTTAACTTACACAGATGTAT+CGG | + | chr1_4:38491707-38491726 | None:intergenic | 30.0% | |
| ! | CAAAGTATCACACAAGAAAA+AGG | + | chr1_4:38491785-38491804 | None:intergenic | 30.0% |
| ATGGATAAAAAGCTGTTGAA+AGG | + | chr1_4:38491809-38491828 | None:intergenic | 30.0% | |
| TTGTTCATTCCTTTATCTGA+TGG | - | chr1_4:38491998-38492017 | Msa0162130:intron | 30.0% | |
| TGTTCATTCCTTTATCTGAT+GGG | - | chr1_4:38491999-38492018 | Msa0162130:intron | 30.0% | |
| ATTAACTACCCATCAGATAA+AGG | + | chr1_4:38492010-38492029 | None:intergenic | 30.0% | |
| TAACTCCCAATACAAATGAA+TGG | - | chr1_4:38492056-38492075 | Msa0162130:intron | 30.0% | |
| AACTCCCAATACAAATGAAT+GGG | - | chr1_4:38492057-38492076 | Msa0162130:intron | 30.0% | |
| CATGATATACAGAAAATAGG+GGG | - | chr1_4:38492119-38492138 | Msa0162130:intron | 30.0% | |
| ! | GAAAGGAAGATTTTCTTTTG+AGG | + | chr1_4:38492178-38492197 | None:intergenic | 30.0% |
| TTAGTATAGAGGAAAGTGAA+AGG | + | chr1_4:38492195-38492214 | None:intergenic | 30.0% | |
| CAGGATAGTAGTAAAATCAA+TGG | - | chr1_4:38492335-38492354 | Msa0162130:intron | 30.0% | |
| TCTATTCCAAATCATGAGAT+TGG | + | chr1_4:38492477-38492496 | None:intergenic | 30.0% | |
| CTTACGTTACGTTCTTATAT+AGG | - | chr1_4:38492680-38492699 | Msa0162130:intron | 30.0% | |
| ! | ACGGAAGTGTATAAAATCTA+TGG | - | chr1_4:38492810-38492829 | Msa0162130:intron | 30.0% |
| ! | CGGAAGTGTATAAAATCTAT+GGG | - | chr1_4:38492811-38492830 | Msa0162130:intron | 30.0% |
| GGTAGATGCTACATAAATTA+TGG | - | chr1_4:38493187-38493206 | Msa0162130:intron | 30.0% | |
| ATGCATACTTTCATTGGATT+TGG | + | chr1_4:38493250-38493269 | None:intergenic | 30.0% | |
| TCATTGATGCATACTTTCAT+TGG | + | chr1_4:38493256-38493275 | None:intergenic | 30.0% | |
| !! | CAAGTTGATCTCTTAATCAT+GGG | - | chr1_4:38493353-38493372 | Msa0162130:CDS | 30.0% |
| TTTCATTTATGCATGGTTGA+TGG | - | chr1_4:38493469-38493488 | Msa0162130:CDS | 30.0% | |
| AAAGAGAAGGATGAAGATGA+AGG | - | chr1_4:38491225-38491244 | Msa0162130:CDS | 35.0% | |
| AAGCTTGTATGCTCTTAAGT+GGG | - | chr1_4:38491276-38491295 | Msa0162130:intron | 35.0% | |
| AACGTTGAAGAGGTTATCAA+GGG | + | chr1_4:38491302-38491321 | None:intergenic | 35.0% | |
| TAACGTTGAAGAGGTTATCA+AGG | + | chr1_4:38491303-38491322 | None:intergenic | 35.0% | |
| TGATAACCTCTTCAACGTTA+TGG | - | chr1_4:38491303-38491322 | Msa0162130:intron | 35.0% | |
| TGGAACAACATCTGAAAATG+AGG | - | chr1_4:38491342-38491361 | Msa0162130:intron | 35.0% | |
| AACAACATCTGAAAATGAGG+AGG | - | chr1_4:38491345-38491364 | Msa0162130:intron | 35.0% | |
| ACAACATCTGAAAATGAGGA+GGG | - | chr1_4:38491346-38491365 | Msa0162130:intron | 35.0% | |
| TTATGCATACCCTATACCTA+TGG | - | chr1_4:38491408-38491427 | Msa0162130:CDS | 35.0% | |
| TATGCATACCCTATACCTAT+GGG | - | chr1_4:38491409-38491428 | Msa0162130:CDS | 35.0% | |
| ATATACTAACCAATACCAGC+TGG | + | chr1_4:38491436-38491455 | None:intergenic | 35.0% | |
| AGGAAGTTAGCAAAGAAAGT+TGG | + | chr1_4:38491473-38491492 | None:intergenic | 35.0% | |
| GAGCAATTCTCCAAGAAAAA+TGG | + | chr1_4:38491639-38491658 | None:intergenic | 35.0% | |
| CGGAAATGAGCAAAATCATA+TGG | + | chr1_4:38491667-38491686 | None:intergenic | 35.0% | |
| ACGGGAATGAGAAAAATAGA+TGG | - | chr1_4:38491745-38491764 | Msa0162130:intron | 35.0% | |
| CGGGAATGAGAAAAATAGAT+GGG | - | chr1_4:38491746-38491765 | Msa0162130:intron | 35.0% | |
| TTCAAAGAATCTGCAACTTC+AGG | + | chr1_4:38491837-38491856 | None:intergenic | 35.0% | |
| !! | TTTTGAGGAAGGAAAGTGAA+AGG | + | chr1_4:38492163-38492182 | None:intergenic | 35.0% |
| !! | GGAAGATTTTCTTTTGAGGA+AGG | + | chr1_4:38492174-38492193 | None:intergenic | 35.0% |
| CATAGTATATATGCACGACT+AGG | + | chr1_4:38492571-38492590 | None:intergenic | 35.0% | |
| GTGCATATATACTATGACCT+TGG | - | chr1_4:38492575-38492594 | Msa0162130:intron | 35.0% | |
| ATTCAGATACTCTTTAGCCA+AGG | + | chr1_4:38492595-38492614 | None:intergenic | 35.0% | |
| GAAATGAGTTTCGCTTTACA+AGG | + | chr1_4:38492739-38492758 | None:intergenic | 35.0% | |
| GTATGCATCAATGAAAATGC+AGG | - | chr1_4:38493262-38493281 | Msa0162130:intron | 35.0% | |
| ! | GCAGAAAGTGTGATTCTTAA+TGG | - | chr1_4:38493290-38493309 | Msa0162130:intron | 35.0% |
| ! | TGCAAGAGAAATGATTTGTC+AGG | - | chr1_4:38493316-38493335 | Msa0162130:intron | 35.0% |
| !! | GCAAGTTGATCTCTTAATCA+TGG | - | chr1_4:38493352-38493371 | Msa0162130:CDS | 35.0% |
| !!! | TTTACCTTTTGAGTTTGCCA+AGG | + | chr1_4:38493388-38493407 | None:intergenic | 35.0% |
| AATAGTCACTTACACTTCCA+AGG | + | chr1_4:38493529-38493548 | None:intergenic | 35.0% | |
| AAAGAGAAGGATGAAGATGA+AGG | - | chr1_4:38491225-38491244 | Msa0162130:CDS | 35.0% | |
| AAGCTTGTATGCTCTTAAGT+GGG | - | chr1_4:38491276-38491295 | Msa0162130:intron | 35.0% | |
| AACGTTGAAGAGGTTATCAA+GGG | + | chr1_4:38491302-38491321 | None:intergenic | 35.0% | |
| TAACGTTGAAGAGGTTATCA+AGG | + | chr1_4:38491303-38491322 | None:intergenic | 35.0% | |
| TGATAACCTCTTCAACGTTA+TGG | - | chr1_4:38491303-38491322 | Msa0162130:intron | 35.0% | |
| TGGAACAACATCTGAAAATG+AGG | - | chr1_4:38491342-38491361 | Msa0162130:intron | 35.0% | |
| AACAACATCTGAAAATGAGG+AGG | - | chr1_4:38491345-38491364 | Msa0162130:intron | 35.0% | |
| ACAACATCTGAAAATGAGGA+GGG | - | chr1_4:38491346-38491365 | Msa0162130:intron | 35.0% | |
| TTATGCATACCCTATACCTA+TGG | - | chr1_4:38491408-38491427 | Msa0162130:CDS | 35.0% | |
| TATGCATACCCTATACCTAT+GGG | - | chr1_4:38491409-38491428 | Msa0162130:CDS | 35.0% | |
| ATATACTAACCAATACCAGC+TGG | + | chr1_4:38491436-38491455 | None:intergenic | 35.0% | |
| AGGAAGTTAGCAAAGAAAGT+TGG | + | chr1_4:38491473-38491492 | None:intergenic | 35.0% | |
| GAGCAATTCTCCAAGAAAAA+TGG | + | chr1_4:38491639-38491658 | None:intergenic | 35.0% | |
| CGGAAATGAGCAAAATCATA+TGG | + | chr1_4:38491667-38491686 | None:intergenic | 35.0% | |
| ACGGGAATGAGAAAAATAGA+TGG | - | chr1_4:38491745-38491764 | Msa0162130:intron | 35.0% | |
| CGGGAATGAGAAAAATAGAT+GGG | - | chr1_4:38491746-38491765 | Msa0162130:intron | 35.0% | |
| TTCAAAGAATCTGCAACTTC+AGG | + | chr1_4:38491837-38491856 | None:intergenic | 35.0% | |
| !! | TTTTGAGGAAGGAAAGTGAA+AGG | + | chr1_4:38492163-38492182 | None:intergenic | 35.0% |
| !! | GGAAGATTTTCTTTTGAGGA+AGG | + | chr1_4:38492174-38492193 | None:intergenic | 35.0% |
| CATAGTATATATGCACGACT+AGG | + | chr1_4:38492571-38492590 | None:intergenic | 35.0% | |
| GTGCATATATACTATGACCT+TGG | - | chr1_4:38492575-38492594 | Msa0162130:intron | 35.0% | |
| ATTCAGATACTCTTTAGCCA+AGG | + | chr1_4:38492595-38492614 | None:intergenic | 35.0% | |
| GAAATGAGTTTCGCTTTACA+AGG | + | chr1_4:38492739-38492758 | None:intergenic | 35.0% | |
| GTATGCATCAATGAAAATGC+AGG | - | chr1_4:38493262-38493281 | Msa0162130:intron | 35.0% | |
| ! | GCAGAAAGTGTGATTCTTAA+TGG | - | chr1_4:38493290-38493309 | Msa0162130:intron | 35.0% |
| ! | TGCAAGAGAAATGATTTGTC+AGG | - | chr1_4:38493316-38493335 | Msa0162130:intron | 35.0% |
| !! | GCAAGTTGATCTCTTAATCA+TGG | - | chr1_4:38493352-38493371 | Msa0162130:CDS | 35.0% |
| !!! | TTTACCTTTTGAGTTTGCCA+AGG | + | chr1_4:38493388-38493407 | None:intergenic | 35.0% |
| AATAGTCACTTACACTTCCA+AGG | + | chr1_4:38493529-38493548 | None:intergenic | 35.0% | |
| AAGGATGAAGATGAAGGTGA+TGG | - | chr1_4:38491231-38491250 | Msa0162130:CDS | 40.0% | |
| GAAGCTTGTATGCTCTTAAG+TGG | - | chr1_4:38491275-38491294 | Msa0162130:intron | 40.0% | |
| CGTTATGGCTACTGTTACTA+TGG | - | chr1_4:38491318-38491337 | Msa0162130:intron | 40.0% | |
| ATGGCTACTGTTACTATGGA+TGG | - | chr1_4:38491322-38491341 | Msa0162130:intron | 40.0% | |
| CAACATCTGAAAATGAGGAG+GGG | - | chr1_4:38491347-38491366 | Msa0162130:intron | 40.0% | |
| GTATAGGGTATGCATAAGTG+TGG | + | chr1_4:38491405-38491424 | None:intergenic | 40.0% | |
| TGTGTAAGTTAAGTCACGCT+CGG | - | chr1_4:38491714-38491733 | Msa0162130:intron | 40.0% | |
| ! | AGCTGCAGATTTTTCTTGCT+GGG | + | chr1_4:38491865-38491884 | None:intergenic | 40.0% |
| ! | TAGCTGCAGATTTTTCTTGC+TGG | + | chr1_4:38491866-38491885 | None:intergenic | 40.0% |
| ACAGACATTATTCTCTCGTC+AGG | - | chr1_4:38492316-38492335 | Msa0162130:intron | 40.0% | |
| AGGGAACCAATCTCATGATT+TGG | - | chr1_4:38492468-38492487 | Msa0162130:intron | 40.0% | |
| AGCGAAACTCATTTCCTTGA+CGG | - | chr1_4:38492744-38492763 | Msa0162130:intron | 40.0% | |
| ! | TTTTTACGGAACTTCCGTCA+AGG | + | chr1_4:38492761-38492780 | None:intergenic | 40.0% |
| AAGGATGAAGATGAAGGTGA+TGG | - | chr1_4:38491231-38491250 | Msa0162130:CDS | 40.0% | |
| GAAGCTTGTATGCTCTTAAG+TGG | - | chr1_4:38491275-38491294 | Msa0162130:intron | 40.0% | |
| CGTTATGGCTACTGTTACTA+TGG | - | chr1_4:38491318-38491337 | Msa0162130:intron | 40.0% | |
| ATGGCTACTGTTACTATGGA+TGG | - | chr1_4:38491322-38491341 | Msa0162130:intron | 40.0% | |
| CAACATCTGAAAATGAGGAG+GGG | - | chr1_4:38491347-38491366 | Msa0162130:intron | 40.0% | |
| GTATAGGGTATGCATAAGTG+TGG | + | chr1_4:38491405-38491424 | None:intergenic | 40.0% | |
| TGTGTAAGTTAAGTCACGCT+CGG | - | chr1_4:38491714-38491733 | Msa0162130:intron | 40.0% | |
| ! | AGCTGCAGATTTTTCTTGCT+GGG | + | chr1_4:38491865-38491884 | None:intergenic | 40.0% |
| ! | TAGCTGCAGATTTTTCTTGC+TGG | + | chr1_4:38491866-38491885 | None:intergenic | 40.0% |
| ACAGACATTATTCTCTCGTC+AGG | - | chr1_4:38492316-38492335 | Msa0162130:intron | 40.0% | |
| AGGGAACCAATCTCATGATT+TGG | - | chr1_4:38492468-38492487 | Msa0162130:intron | 40.0% | |
| AGCGAAACTCATTTCCTTGA+CGG | - | chr1_4:38492744-38492763 | Msa0162130:intron | 40.0% | |
| ! | TTTTTACGGAACTTCCGTCA+AGG | + | chr1_4:38492761-38492780 | None:intergenic | 40.0% |
| !! | TGGAAGTGTTGACCAAGTGA+GGG | - | chr1_4:38491189-38491208 | Msa0162130:CDS | 45.0% |
| GAGGTGCAGAAGAAAAGAGA+AGG | - | chr1_4:38491212-38491231 | Msa0162130:CDS | 45.0% | |
| ! | GATGAAGATGAAGGTGATGG+TGG | - | chr1_4:38491234-38491253 | Msa0162130:CDS | 45.0% |
| GTGGCAATAGATGAGAGTGA+TGG | - | chr1_4:38491253-38491272 | Msa0162130:intron | 45.0% | |
| CAGTAGCCATAACGTTGAAG+AGG | + | chr1_4:38491312-38491331 | None:intergenic | 45.0% | |
| ATCTGAAAATGAGGAGGGGA+TGG | - | chr1_4:38491351-38491370 | Msa0162130:intron | 45.0% | |
| !! | TCTGCAACTTCAGGTGTTGA+TGG | + | chr1_4:38491828-38491847 | None:intergenic | 45.0% |
| AATCTGCAGCTATTGCCTCA+CGG | - | chr1_4:38491874-38491893 | Msa0162130:intron | 45.0% | |
| CTCTTAATCATGGGTAGTCG+TGG | - | chr1_4:38493362-38493381 | Msa0162130:CDS | 45.0% | |
| GGTGGCTTCACAATGAGAAT+AGG | + | chr1_4:38493572-38493591 | None:intergenic | 45.0% | |
| ! | TTTTTATGGTGCTCCTCTGG+TGG | + | chr1_4:38493590-38493609 | None:intergenic | 45.0% |
| !! | TGCTTTTTATGGTGCTCCTC+TGG | + | chr1_4:38493593-38493612 | None:intergenic | 45.0% |
| !! | TGGAAGTGTTGACCAAGTGA+GGG | - | chr1_4:38491189-38491208 | Msa0162130:CDS | 45.0% |
| GAGGTGCAGAAGAAAAGAGA+AGG | - | chr1_4:38491212-38491231 | Msa0162130:CDS | 45.0% | |
| ! | GATGAAGATGAAGGTGATGG+TGG | - | chr1_4:38491234-38491253 | Msa0162130:CDS | 45.0% |
| GTGGCAATAGATGAGAGTGA+TGG | - | chr1_4:38491253-38491272 | Msa0162130:intron | 45.0% | |
| CAGTAGCCATAACGTTGAAG+AGG | + | chr1_4:38491312-38491331 | None:intergenic | 45.0% | |
| ATCTGAAAATGAGGAGGGGA+TGG | - | chr1_4:38491351-38491370 | Msa0162130:intron | 45.0% | |
| !! | TCTGCAACTTCAGGTGTTGA+TGG | + | chr1_4:38491828-38491847 | None:intergenic | 45.0% |
| AATCTGCAGCTATTGCCTCA+CGG | - | chr1_4:38491874-38491893 | Msa0162130:intron | 45.0% | |
| CTCTTAATCATGGGTAGTCG+TGG | - | chr1_4:38493362-38493381 | Msa0162130:CDS | 45.0% | |
| GGTGGCTTCACAATGAGAAT+AGG | + | chr1_4:38493572-38493591 | None:intergenic | 45.0% | |
| ! | TTTTTATGGTGCTCCTCTGG+TGG | + | chr1_4:38493590-38493609 | None:intergenic | 45.0% |
| !! | TGCTTTTTATGGTGCTCCTC+TGG | + | chr1_4:38493593-38493612 | None:intergenic | 45.0% |
| !!! | AGTTTTTTTTTTTTTTTTTA+CGG | + | chr1_4:38492775-38492794 | None:intergenic | 5.0% |
| !! | TTTAATATAAAATATACAAT+TGG | + | chr1_4:38492939-38492958 | None:intergenic | 5.0% |
| !! | CATAAATATTAAATAAATTT+AGG | + | chr1_4:38493090-38493109 | None:intergenic | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTA+CGG | + | chr1_4:38492775-38492794 | None:intergenic | 5.0% |
| !! | TTTAATATAAAATATACAAT+TGG | + | chr1_4:38492939-38492958 | None:intergenic | 5.0% |
| !! | CATAAATATTAAATAAATTT+AGG | + | chr1_4:38493090-38493109 | None:intergenic | 5.0% |
| !! | GTGGAAGTGTTGACCAAGTG+AGG | - | chr1_4:38491188-38491207 | Msa0162130:CDS | 50.0% |
| !! | GGAAGTGTTGACCAAGTGAG+GGG | - | chr1_4:38491190-38491209 | Msa0162130:CDS | 50.0% |
| CAGCTGGTCCCATAGGTATA+GGG | + | chr1_4:38491420-38491439 | None:intergenic | 50.0% | |
| CTTACACAGATGTATCGGGC+AGG | + | chr1_4:38491702-38491721 | None:intergenic | 50.0% | |
| !! | GTCACGCTCGGCTATTTTGA+CGG | - | chr1_4:38491726-38491745 | Msa0162130:intron | 50.0% |
| !!! | TCACGCTCGGCTATTTTGAC+GGG | - | chr1_4:38491727-38491746 | Msa0162130:intron | 50.0% |
| ATCTGCAGCTATTGCCTCAC+GGG | - | chr1_4:38491875-38491894 | Msa0162130:intron | 50.0% | |
| ACGGGCTTTGCAAATGTGCA+AGG | - | chr1_4:38491893-38491912 | Msa0162130:intron | 50.0% | |
| GCAAATGTGCAAGGACAAGC+AGG | - | chr1_4:38491902-38491921 | Msa0162130:intron | 50.0% | |
| ! | GTGGCCTTGGCAAACTCAAA+AGG | - | chr1_4:38493381-38493400 | Msa0162130:CDS | 50.0% |
| ! | TTTGGTGGCAGAGCATTCCT+TGG | - | chr1_4:38493509-38493528 | Msa0162130:CDS | 50.0% |
| TCTCATTGTGAAGCCACCAG+AGG | - | chr1_4:38493574-38493593 | Msa0162130:CDS | 50.0% | |
| !! | GTGGAAGTGTTGACCAAGTG+AGG | - | chr1_4:38491188-38491207 | Msa0162130:CDS | 50.0% |
| !! | GGAAGTGTTGACCAAGTGAG+GGG | - | chr1_4:38491190-38491209 | Msa0162130:CDS | 50.0% |
| CAGCTGGTCCCATAGGTATA+GGG | + | chr1_4:38491420-38491439 | None:intergenic | 50.0% | |
| CTTACACAGATGTATCGGGC+AGG | + | chr1_4:38491702-38491721 | None:intergenic | 50.0% | |
| !! | GTCACGCTCGGCTATTTTGA+CGG | - | chr1_4:38491726-38491745 | Msa0162130:intron | 50.0% |
| !!! | TCACGCTCGGCTATTTTGAC+GGG | - | chr1_4:38491727-38491746 | Msa0162130:intron | 50.0% |
| ATCTGCAGCTATTGCCTCAC+GGG | - | chr1_4:38491875-38491894 | Msa0162130:intron | 50.0% | |
| ACGGGCTTTGCAAATGTGCA+AGG | - | chr1_4:38491893-38491912 | Msa0162130:intron | 50.0% | |
| GCAAATGTGCAAGGACAAGC+AGG | - | chr1_4:38491902-38491921 | Msa0162130:intron | 50.0% | |
| ! | GTGGCCTTGGCAAACTCAAA+AGG | - | chr1_4:38493381-38493400 | Msa0162130:CDS | 50.0% |
| ! | TTTGGTGGCAGAGCATTCCT+TGG | - | chr1_4:38493509-38493528 | Msa0162130:CDS | 50.0% |
| TCTCATTGTGAAGCCACCAG+AGG | - | chr1_4:38493574-38493593 | Msa0162130:CDS | 50.0% | |
| !! | AGTGTTGACCAAGTGAGGGG+AGG | - | chr1_4:38491193-38491212 | Msa0162130:CDS | 55.0% |
| CCAGCTGGTCCCATAGGTAT+AGG | + | chr1_4:38491421-38491440 | None:intergenic | 55.0% | |
| CCTATACCTATGGGACCAGC+TGG | - | chr1_4:38491418-38491437 | Msa0162130:CDS | 55.0% | |
| CCAATACCAGCTGGTCCCAT+AGG | + | chr1_4:38491427-38491446 | None:intergenic | 55.0% | |
| CCTATGGGACCAGCTGGTAT+TGG | - | chr1_4:38491424-38491443 | Msa0162130:CDS | 55.0% | |
| CGGGCAGGTGTATTTCTCAG+CGG | + | chr1_4:38491687-38491706 | None:intergenic | 55.0% | |
| GCACATTTGCAAAGCCCGTG+AGG | + | chr1_4:38491892-38491911 | None:intergenic | 55.0% | |
| TGTGCAAGGACAAGCAGGTG+CGG | - | chr1_4:38491907-38491926 | Msa0162130:intron | 55.0% | |
| ATCATGGGTAGTCGTGGCCT+TGG | - | chr1_4:38493368-38493387 | Msa0162130:CDS | 55.0% | |
| !! | AGTGTTGACCAAGTGAGGGG+AGG | - | chr1_4:38491193-38491212 | Msa0162130:CDS | 55.0% |
| CCAGCTGGTCCCATAGGTAT+AGG | + | chr1_4:38491421-38491440 | None:intergenic | 55.0% | |
| CCTATACCTATGGGACCAGC+TGG | - | chr1_4:38491418-38491437 | Msa0162130:CDS | 55.0% | |
| CCAATACCAGCTGGTCCCAT+AGG | + | chr1_4:38491427-38491446 | None:intergenic | 55.0% | |
| CCTATGGGACCAGCTGGTAT+TGG | - | chr1_4:38491424-38491443 | Msa0162130:CDS | 55.0% | |
| CGGGCAGGTGTATTTCTCAG+CGG | + | chr1_4:38491687-38491706 | None:intergenic | 55.0% | |
| GCACATTTGCAAAGCCCGTG+AGG | + | chr1_4:38491892-38491911 | None:intergenic | 55.0% | |
| TGTGCAAGGACAAGCAGGTG+CGG | - | chr1_4:38491907-38491926 | Msa0162130:intron | 55.0% | |
| ATCATGGGTAGTCGTGGCCT+TGG | - | chr1_4:38493368-38493387 | Msa0162130:CDS | 55.0% | |
| CTTCTGCACCTCCCCTCACT+TGG | + | chr1_4:38491204-38491223 | None:intergenic | 60.0% | |
| CTTCTGCACCTCCCCTCACT+TGG | + | chr1_4:38491204-38491223 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 38491175 | 38493616 | 38491175 | ID=Msa0162130;Name=Msa0162130 |
| chr1_4 | mRNA | 38491175 | 38493616 | 38491175 | ID=Msa0162130-mRNA-1;Parent=Msa0162130;Name=Msa0162130-mRNA-1;_AED=0.32;_eAED=0.33;_QI=0|0.66|0.25|1|1|1|4|0|197 |
| chr1_4 | exon | 38493346 | 38493616 | 38493346 | ID=Msa0162130-mRNA-1:exon:11294;Parent=Msa0162130-mRNA-1 |
| chr1_4 | exon | 38492868 | 38492974 | 38492868 | ID=Msa0162130-mRNA-1:exon:11293;Parent=Msa0162130-mRNA-1 |
| chr1_4 | exon | 38491389 | 38491507 | 38491389 | ID=Msa0162130-mRNA-1:exon:11292;Parent=Msa0162130-mRNA-1 |
| chr1_4 | exon | 38491175 | 38491271 | 38491175 | ID=Msa0162130-mRNA-1:exon:11291;Parent=Msa0162130-mRNA-1 |
| chr1_4 | CDS | 38493346 | 38493616 | 38493346 | ID=Msa0162130-mRNA-1:cds;Parent=Msa0162130-mRNA-1 |
| chr1_4 | CDS | 38492868 | 38492974 | 38492868 | ID=Msa0162130-mRNA-1:cds;Parent=Msa0162130-mRNA-1 |
| chr1_4 | CDS | 38491389 | 38491507 | 38491389 | ID=Msa0162130-mRNA-1:cds;Parent=Msa0162130-mRNA-1 |
| chr1_4 | CDS | 38491175 | 38491271 | 38491175 | ID=Msa0162130-mRNA-1:cds;Parent=Msa0162130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
