Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079680 | sp|Q6GP04|MON2_XENLA | 27.473 | 273 | 162 | 8 | 7 | 271 | 20 | 264 | 3.22e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079680 | A0A072VNP6 | 98.925 | 279 | 1 | 1 | 1 | 277 | 1 | 279 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042330 | Msa0079680 | 0.846164 | 2.579986e-59 | -8.615850e-47 |
| Msa0079680 | Msa0111350 | 0.885787 | 6.013531e-72 | -8.615850e-47 |
| Msa0079680 | Msa0179250 | 0.871666 | 5.744972e-67 | -8.615850e-47 |
| Msa0079680 | Msa0539010 | 0.804103 | 2.536800e-49 | -8.615850e-47 |
| Msa0079680 | Msa0573100 | 0.847468 | 1.134359e-59 | -8.615850e-47 |
| Msa0079680 | Msa0707000 | 0.800702 | 1.273064e-48 | -8.615850e-47 |
| Msa0079680 | Msa1123290 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0079680 | Msa1123310 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0079680 | Msa1256070 | 0.814375 | 1.590675e-51 | -8.615850e-47 |
| Msa0079680 | Msa1381100 | 0.803842 | 2.873968e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079680 | MtrunA17_Chr1g0191121 | 98.925 | 279 | 1 | 1 | 1 | 277 | 1 | 279 | 0.0 | 555 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079680 | AT5G27970.5 | 69.065 | 278 | 84 | 2 | 1 | 277 | 1 | 277 | 3.15e-114 | 360 |
| Msa0079680 | AT5G27970.4 | 69.065 | 278 | 84 | 2 | 1 | 277 | 1 | 277 | 3.27e-114 | 360 |
| Msa0079680 | AT5G27970.3 | 69.065 | 278 | 84 | 2 | 1 | 277 | 1 | 277 | 4.44e-114 | 360 |
| Msa0079680 | AT5G27970.2 | 69.065 | 278 | 84 | 2 | 1 | 277 | 1 | 277 | 4.45e-114 | 360 |
| Msa0079680 | AT5G27970.1 | 65.979 | 291 | 84 | 3 | 1 | 277 | 1 | 290 | 7.00e-111 | 351 |
Find 65 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCCTGCCGGAAAATT+TGG | 0.176789 | 1_2:+57630097 | Msa0079680:CDS |
| ACCGTCAAGCTTAGCATTAT+TGG | 0.210215 | 1_2:+57626152 | Msa0079680:CDS |
| TGTCTATTATACAGGCAATT+TGG | 0.239552 | 1_2:+57630714 | Msa0079680:intron |
| TTCTTCCGAGATGGCTTTCA+TGG | 0.277525 | 1_2:+57625109 | Msa0079680:exon |
| AGGGAGACGTTGACTGAAAC+TGG | 0.282780 | 1_2:+57630461 | Msa0079680:CDS |
| TCTGAAAACAGCCACATAAT+TGG | 0.291696 | 1_2:-57632219 | None:intergenic |
| AAGCTCTTGGCATCTGTCTC+AGG | 0.366670 | 1_2:+57629100 | Msa0079680:CDS |
| GATGGCTTTCATGGCGGTCT+TGG | 0.373561 | 1_2:+57625118 | Msa0079680:exon |
| TTGACTGAAACTGGGAAACT+TGG | 0.374695 | 1_2:+57630470 | Msa0079680:CDS |
| TTAGATCATGAATCTACATT+TGG | 0.381004 | 1_2:+57630422 | Msa0079680:CDS |
| TCCAATAATGCTAAGCTTGA+CGG | 0.396324 | 1_2:-57626153 | None:intergenic |
| TCACGGACTAATTCAGTTAC+TGG | 0.397698 | 1_2:+57630136 | Msa0079680:CDS |
| CCTGCCGGAAAATTTGGTTA+TGG | 0.411854 | 1_2:+57630103 | Msa0079680:CDS |
| ACCCTTGCAGCATGCTGAAA+TGG | 0.420618 | 1_2:+57626594 | Msa0079680:intron |
| CTTCAGGCAAGCAGTTGCCT+TGG | 0.446856 | 1_2:+57630048 | Msa0079680:CDS |
| AATTATTGATATTGTTTGAA+GGG | 0.447451 | 1_2:-57626641 | None:intergenic |
| ACGAGTGAGGACTCTTCGTC+AGG | 0.447715 | 1_2:-57625087 | None:intergenic |
| ACTCAGACAAATTGATGCTT+CGG | 0.453817 | 1_2:-57630168 | None:intergenic |
| GTACTGCTGCAGCTACCTTC+AGG | 0.454405 | 1_2:+57630032 | Msa0079680:intron |
| CACCTGTTCGTAGGGTATCA+AGG | 0.462513 | 1_2:-57632243 | None:intergenic |
| TGGATAGCGACGTCGAGCTT+CGG | 0.466581 | 1_2:-57625165 | None:intergenic |
| CCTCGTAGCAGATGGAGAAA+TGG | 0.483236 | 1_2:-57626210 | None:intergenic |
| AAATTATTGATATTGTTTGA+AGG | 0.491958 | 1_2:-57626642 | None:intergenic |
| GATCATGAATCTACATTTGG+AGG | 0.501411 | 1_2:+57630425 | Msa0079680:CDS |
| GCATGCTGAAATGGCGGATG+AGG | 0.509939 | 1_2:+57626603 | Msa0079680:intron |
| GATACTATGTCTCAAGCTCT+TGG | 0.514033 | 1_2:+57629087 | Msa0079680:CDS |
| CCTCACTCGTTCTTCCGAGA+TGG | 0.516562 | 1_2:+57625100 | Msa0079680:exon |
| GACCTGACATCTCTTGCTGC+AGG | 0.516993 | 1_2:+57630509 | Msa0079680:CDS |
| GCCGGAAAATTTGGTTATGG+AGG | 0.528093 | 1_2:+57630106 | Msa0079680:CDS |
| TTGGCTGAGTCTCTTCCTGC+CGG | 0.528559 | 1_2:+57630088 | Msa0079680:CDS |
| CACCTGCAGCAAGAGATGTC+AGG | 0.533425 | 1_2:-57630511 | None:intergenic |
| GTTATGGAGGGCAGCTCTCA+CGG | 0.541498 | 1_2:+57630119 | Msa0079680:CDS |
| TCATTATGCGCAATTTCACT+AGG | 0.544453 | 1_2:-57626089 | None:intergenic |
| CATTTCTCCATCTGCTACGA+GGG | 0.549206 | 1_2:+57626211 | Msa0079680:CDS |
| AAAATCTCCCTCGTAGCAGA+TGG | 0.552147 | 1_2:-57626218 | None:intergenic |
| GACCGCCATGAAAGCCATCT+CGG | 0.559440 | 1_2:-57625114 | None:intergenic |
| CCGGAAAATTTGGTTATGGA+GGG | 0.559658 | 1_2:+57630107 | Msa0079680:CDS |
| CAAGGCAACTGCTTGCCTGA+AGG | 0.575067 | 1_2:-57630047 | None:intergenic |
| CTGACATCTCTTGCTGCAGG+TGG | 0.578990 | 1_2:+57630512 | Msa0079680:CDS |
| TGACTGAAACTGGGAAACTT+GGG | 0.580583 | 1_2:+57630471 | Msa0079680:CDS |
| TTGGAGGGCCTCATGTGATG+AGG | 0.581357 | 1_2:+57630441 | Msa0079680:CDS |
| TCTGCACCGTCTTTAACAGC+TGG | 0.583208 | 1_2:-57625185 | None:intergenic |
| ATCATGAATCTACATTTGGA+GGG | 0.586031 | 1_2:+57630426 | Msa0079680:CDS |
| ACCACTCGGGGAAGGAAGTG+TGG | 0.589081 | 1_2:-57625039 | None:intergenic |
| TGCAGAGCATGCTATTCTCA+AGG | 0.595451 | 1_2:+57625202 | Msa0079680:CDS |
| GAGCTTCGGCGGAGAGAGCG+CGG | 0.598622 | 1_2:-57625151 | None:intergenic |
| GAGACTCAGCCAAAACCACT+TGG | 0.601853 | 1_2:-57630078 | None:intergenic |
| TTCCGAGATGGCTTTCATGG+CGG | 0.606867 | 1_2:+57625112 | Msa0079680:exon |
| TGGAGGGCCTCATGTGATGA+GGG | 0.611196 | 1_2:+57630442 | Msa0079680:CDS |
| CGAGTGAGGACTCTTCGTCA+GGG | 0.615332 | 1_2:-57625086 | None:intergenic |
| CGCTATCCAGCTGTTAAAGA+CGG | 0.615452 | 1_2:+57625179 | Msa0079680:CDS |
| ATAGCGACGTCGAGCTTCGG+CGG | 0.632500 | 1_2:-57625162 | None:intergenic |
| CCATCTCGGAAGAACGAGTG+AGG | 0.647988 | 1_2:-57625100 | None:intergenic |
| CATGCTGAAATGGCGGATGA+GGG | 0.648303 | 1_2:+57626604 | Msa0079680:CDS |
| GGGAGACGTTGACTGAAACT+GGG | 0.651628 | 1_2:+57630462 | Msa0079680:CDS |
| CCATTTCTCCATCTGCTACG+AGG | 0.652938 | 1_2:+57626210 | Msa0079680:CDS |
| AACGTCTCCCTCATCACATG+AGG | 0.654111 | 1_2:-57630449 | None:intergenic |
| GCAACGCAGTGACTCACGTG+TGG | 0.658160 | 1_2:-57624974 | None:intergenic |
| TGCGCGTAAACATTGTTCAG+AGG | 0.660943 | 1_2:+57630738 | Msa0079680:CDS |
| ACACGTGAGTCACTGCGTTG+CGG | 0.662447 | 1_2:+57624976 | Msa0079680:five_prime_UTR |
| AACCACTTGGTCGAAAACCA+AGG | 0.666294 | 1_2:-57630065 | None:intergenic |
| ACGATTACACCCTGAAAACG+AGG | 0.670953 | 1_2:+57626672 | Msa0079680:CDS |
| ACCACACTTCCTTCCCCGAG+TGG | 0.673714 | 1_2:+57625038 | Msa0079680:five_prime_UTR |
| CTTGCAGCATGCTGAAATGG+CGG | 0.690190 | 1_2:+57626597 | Msa0079680:intron |
| CTTCGGCGGAGAGAGCGCGG+AGG | 0.758774 | 1_2:-57625148 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATAGTATATTAGTA+TGG | - | chr1_2:57628140-57628159 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTTATACACTTA+GGG | + | chr1_2:57628828-57628847 | Msa0079680:intron | 10.0% |
| !!! | TATTTAAGTTTATTCAAGTA+AGG | + | chr1_2:57626538-57626557 | Msa0079680:intron | 15.0% |
| !! | AATTATTGATATTGTTTGAA+GGG | - | chr1_2:57626644-57626663 | None:intergenic | 15.0% |
| !! | AAATTATTGATATTGTTTGA+AGG | - | chr1_2:57626645-57626664 | None:intergenic | 15.0% |
| !!! | ATTATTTTCAATTTTTTGGT+AGG | - | chr1_2:57627712-57627731 | None:intergenic | 15.0% |
| !!! | GTACATTATTTTCAATTTTT+TGG | - | chr1_2:57627716-57627735 | None:intergenic | 15.0% |
| !! | TAAAGTAGAATATATTGAAT+TGG | + | chr1_2:57627869-57627888 | Msa0079680:intron | 15.0% |
| !! | TAGTATTAATTAGAGATAAT+TGG | + | chr1_2:57627904-57627923 | Msa0079680:intron | 15.0% |
| !! | AAAATAAATAAGAACAGAAA+AGG | - | chr1_2:57628173-57628192 | None:intergenic | 15.0% |
| !! | ATTCAATATAATGCTTAAAT+TGG | - | chr1_2:57628707-57628726 | None:intergenic | 15.0% |
| !!! | AAATGACTGATTAAATTTTA+AGG | + | chr1_2:57628805-57628824 | Msa0079680:intron | 15.0% |
| !!! | GTTAATTTTTTTATACACTT+AGG | + | chr1_2:57628827-57628846 | Msa0079680:intron | 15.0% |
| !!! | TATTTTATTCATTCAATTAG+TGG | + | chr1_2:57630639-57630658 | Msa0079680:intron | 15.0% |
| !!! | AAATATTAGAATTTTACACT+GGG | - | chr1_2:57630944-57630963 | None:intergenic | 15.0% |
| !!! | AAAATATTAGAATTTTACAC+TGG | - | chr1_2:57630945-57630964 | None:intergenic | 15.0% |
| !! | AAAAAAAAATATGACTAGAT+TGG | - | chr1_2:57631261-57631280 | None:intergenic | 15.0% |
| !!! | CTAATCTTTTTAAATGATTT+TGG | + | chr1_2:57631364-57631383 | Msa0079680:intron | 15.0% |
| !! | ATTATACATACATATGAAAT+TGG | - | chr1_2:57631495-57631514 | None:intergenic | 15.0% |
| !! | TGTAAATTAACATTTGAATT+TGG | + | chr1_2:57631521-57631540 | Msa0079680:intron | 15.0% |
| !!! | AGTTTATGAACTGATTTTAA+TGG | + | chr1_2:57625327-57625346 | Msa0079680:intron | 20.0% |
| !! | TGATGATTGAATCAATATTT+AGG | + | chr1_2:57625470-57625489 | Msa0079680:intron | 20.0% |
| !! | TAAACTTAAATATCACATTC+CGG | - | chr1_2:57626530-57626549 | None:intergenic | 20.0% |
| !! | TTCTAAACTGTATTATATCT+TGG | + | chr1_2:57626737-57626756 | Msa0079680:intron | 20.0% |
| !!! | AAAAGTACTAGATCTAAATA+AGG | + | chr1_2:57626813-57626832 | Msa0079680:intron | 20.0% |
| !!! | GGACAATATTTTTTTACAAA+TGG | + | chr1_2:57627976-57627995 | Msa0079680:intron | 20.0% |
| !!! | TAAAAAACTCCTTTTTTCTT+TGG | - | chr1_2:57628262-57628281 | None:intergenic | 20.0% |
| !!! | AAAGAAAAAAGGAGTTTTTT+AGG | + | chr1_2:57628261-57628280 | Msa0079680:intron | 20.0% |
| !! | TATAATGCTTAAATTGGATT+AGG | - | chr1_2:57628701-57628720 | None:intergenic | 20.0% |
| !!! | GAATAGTAATTCACTATTTT+TGG | + | chr1_2:57628723-57628742 | Msa0079680:intron | 20.0% |
| !!! | CAGTCATTTTTTATATTGTT+AGG | - | chr1_2:57628794-57628813 | None:intergenic | 20.0% |
| !! | TCATTAATCACATAATGATT+TGG | - | chr1_2:57628909-57628928 | None:intergenic | 20.0% |
| !! | ATATAAAAAGACCTCTTATA+GGG | + | chr1_2:57629405-57629424 | Msa0079680:intron | 20.0% |
| !! | ACATAATAAAACATTCAGAT+TGG | - | chr1_2:57629501-57629520 | None:intergenic | 20.0% |
| !! | ATATCAAGTTTCAAATAATG+TGG | + | chr1_2:57629543-57629562 | Msa0079680:intron | 20.0% |
| !!! | TGATTTTTTTATTTGCATGA+AGG | + | chr1_2:57629660-57629679 | Msa0079680:intron | 20.0% |
| !!! | TATTTATCACTGATTTTGAT+TGG | - | chr1_2:57629744-57629763 | None:intergenic | 20.0% |
| !! | CAAGGTCAAATTTATAAAAT+GGG | - | chr1_2:57629821-57629840 | None:intergenic | 20.0% |
| !! | TCAAGGTCAAATTTATAAAA+TGG | - | chr1_2:57629822-57629841 | None:intergenic | 20.0% |
| !! | TGAATTCAGAATTATTATCA+AGG | - | chr1_2:57629839-57629858 | None:intergenic | 20.0% |
| !!! | AAAACGTTTAAATGCATTTT+TGG | - | chr1_2:57630306-57630325 | None:intergenic | 20.0% |
| !! | ATAAAATATGAGTGCTTAAA+CGG | - | chr1_2:57630627-57630646 | None:intergenic | 20.0% |
| !!! | TTCTTGAGTAAGAAATATTT+TGG | + | chr1_2:57630777-57630796 | Msa0079680:intron | 20.0% |
| !!! | TATTTTTTGATCAGATATTC+TGG | + | chr1_2:57630959-57630978 | Msa0079680:intron | 20.0% |
| !! | AAAATAAATAAACACTCCTT+TGG | - | chr1_2:57631098-57631117 | None:intergenic | 20.0% |
| !! | CTTAATATAGATAATGTTTG+TGG | + | chr1_2:57631401-57631420 | Msa0079680:intron | 20.0% |
| !!! | ATTATGCATCATTTACTTTT+TGG | + | chr1_2:57631452-57631471 | Msa0079680:intron | 20.0% |
| !! | TAATGATAAACCATTATGAA+GGG | - | chr1_2:57631660-57631679 | None:intergenic | 20.0% |
| !! | ATAATGATAAACCATTATGA+AGG | - | chr1_2:57631661-57631680 | None:intergenic | 20.0% |
| !! | CATTAATTTCATTCCATTAA+TGG | + | chr1_2:57631821-57631840 | Msa0079680:intron | 20.0% |
| !! | CAATAAATTCTTACCATTAA+TGG | - | chr1_2:57631837-57631856 | None:intergenic | 20.0% |
| !! | CACTAATGGAAATTATATAT+TGG | - | chr1_2:57631907-57631926 | None:intergenic | 20.0% |
| !! | CAATATATAATTTCCATTAG+TGG | + | chr1_2:57631905-57631924 | Msa0079680:intron | 20.0% |
| ! | GAATTTATTATGTTAGATGC+AGG | + | chr1_2:57625671-57625690 | Msa0079680:intron | 25.0% |
| ! | GCTTGATTGAATTGAATTAT+AGG | + | chr1_2:57625839-57625858 | Msa0079680:intron | 25.0% |
| ! | TAAAGTAATGTAATGATGCT+TGG | + | chr1_2:57625870-57625889 | Msa0079680:intron | 25.0% |
| ! | TGCTTGGATCAATAATATTT+AGG | + | chr1_2:57625886-57625905 | Msa0079680:intron | 25.0% |
| ! | TGGATCAATAATATTTAGGA+AGG | + | chr1_2:57625890-57625909 | Msa0079680:intron | 25.0% |
| !! | CATATTACGAATCTTTTTGA+TGG | + | chr1_2:57626115-57626134 | Msa0079680:CDS | 25.0% |
| ! | AAACTAGTTAGATTGTGTAA+TGG | + | chr1_2:57626266-57626285 | Msa0079680:intron | 25.0% |
| ! | TCTCATGTATAAGAAAACAT+TGG | + | chr1_2:57626386-57626405 | Msa0079680:intron | 25.0% |
| !!! | TCAAATAGATTAGCTTTCTT+TGG | + | chr1_2:57626423-57626442 | Msa0079680:intron | 25.0% |
| ! | TCTCAAATATAAGCAAAACT+TGG | - | chr1_2:57626449-57626468 | None:intergenic | 25.0% |
| ! | TTAAGTTTATTCAAGTAAGG+AGG | + | chr1_2:57626541-57626560 | Msa0079680:intron | 25.0% |
| ! | TTAGAACAATCTTTCTTCTT+TGG | - | chr1_2:57627070-57627089 | None:intergenic | 25.0% |
| !!! | TTGTTCTAAAAATTCCATTG+AGG | + | chr1_2:57627081-57627100 | Msa0079680:intron | 25.0% |
| ! | ACTGTTAATGTCAAAAACAT+AGG | + | chr1_2:57627219-57627238 | Msa0079680:intron | 25.0% |
| !! | TTTTCTTAATCTGTGTGAAA+TGG | - | chr1_2:57627771-57627790 | None:intergenic | 25.0% |
| ! | AGAATATATTGAATTGGAAG+TGG | + | chr1_2:57627875-57627894 | Msa0079680:intron | 25.0% |
| ! | ATGAATTGAGTCAATATTCT+TGG | + | chr1_2:57627954-57627973 | Msa0079680:intron | 25.0% |
| ! | TGAATTGAGTCAATATTCTT+GGG | + | chr1_2:57627955-57627974 | Msa0079680:intron | 25.0% |
| !!! | TACAAATGGCTTAGTTTTTA+TGG | + | chr1_2:57627990-57628009 | Msa0079680:intron | 25.0% |
| !!! | ACAAATGGCTTAGTTTTTAT+GGG | + | chr1_2:57627991-57628010 | Msa0079680:intron | 25.0% |
| ! | TGTCAGTTAAAAATAGGATA+AGG | - | chr1_2:57628406-57628425 | None:intergenic | 25.0% |
| !!! | CTATTTTTAACTGACATGTT+GGG | + | chr1_2:57628410-57628429 | Msa0079680:intron | 25.0% |
| ! | AAAAAATCAGACACATGTAA+AGG | - | chr1_2:57629037-57629056 | None:intergenic | 25.0% |
| ! | CACTATATCTTGTTAATTTC+AGG | + | chr1_2:57629065-57629084 | Msa0079680:intron | 25.0% |
| ! | CTCTTAAGTGTATATACAAT+AGG | - | chr1_2:57629183-57629202 | None:intergenic | 25.0% |
| ! | CTATTGTATATACACTTAAG+AGG | + | chr1_2:57629181-57629200 | Msa0079680:intron | 25.0% |
| !! | AGGACTTTTTATGTGATAAT+AGG | + | chr1_2:57629201-57629220 | Msa0079680:intron | 25.0% |
| ! | CATATAAAAAGACCTCTTAT+AGG | + | chr1_2:57629404-57629423 | Msa0079680:intron | 25.0% |
| ! | TTGAAACTTGATATACATCA+TGG | - | chr1_2:57629537-57629556 | None:intergenic | 25.0% |
| ! | CTTATTTACCCATCAATAAA+AGG | + | chr1_2:57629689-57629708 | Msa0079680:intron | 25.0% |
| ! | TCAAAATCAGTGATAAATAG+TGG | + | chr1_2:57629745-57629764 | Msa0079680:intron | 25.0% |
| ! | ATAATTCTGAATTCAACAGT+CGG | + | chr1_2:57629844-57629863 | Msa0079680:intron | 25.0% |
| ! | ATGAGAAAACACTATTAAAC+GGG | - | chr1_2:57630344-57630363 | None:intergenic | 25.0% |
| ! | CATGAGAAAACACTATTAAA+CGG | - | chr1_2:57630345-57630364 | None:intergenic | 25.0% |
| ! | TTAGATCATGAATCTACATT+TGG | + | chr1_2:57630422-57630441 | Msa0079680:CDS | 25.0% |
| ! | GACAAGAAATTTGAACAAAA+TGG | - | chr1_2:57630585-57630604 | None:intergenic | 25.0% |
| !!! | TTTTGCAGCTACTTTTTTAT+TGG | + | chr1_2:57630818-57630837 | Msa0079680:intron | 25.0% |
| ! | GTCTTATCTTTAATCTAAGT+GGG | - | chr1_2:57630855-57630874 | None:intergenic | 25.0% |
| ! | ATTTAAGCACAAGAAAACAA+TGG | - | chr1_2:57631013-57631032 | None:intergenic | 25.0% |
| ! | AGAATACTAATACTGATCAT+GGG | - | chr1_2:57631057-57631076 | None:intergenic | 25.0% |
| ! | AAGAATACTAATACTGATCA+TGG | - | chr1_2:57631058-57631077 | None:intergenic | 25.0% |
| ! | TAATCACAAGAAATATCCAA+AGG | + | chr1_2:57631079-57631098 | Msa0079680:intron | 25.0% |
| ! | TTCTTCTTTGGTTGAAAAAA+TGG | + | chr1_2:57631127-57631146 | Msa0079680:intron | 25.0% |
| ! | GTTAGAAAATACATCTTGAA+GGG | - | chr1_2:57631235-57631254 | None:intergenic | 25.0% |
| ! | AGTTAGAAAATACATCTTGA+AGG | - | chr1_2:57631236-57631255 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCAAAAAAGAGAG+AGG | + | chr1_2:57631283-57631302 | Msa0079680:intron | 25.0% |
| ! | AGAGGTGAAAGTTAAATTAT+TGG | + | chr1_2:57631558-57631577 | Msa0079680:intron | 25.0% |
| ! | AATGATAAACCATTATGAAG+GGG | - | chr1_2:57631659-57631678 | None:intergenic | 25.0% |
| ! | TTATAGTCTACTAATGTATG+AGG | + | chr1_2:57631745-57631764 | Msa0079680:intron | 25.0% |
| ! | TTGTAAAACATACATGTCTA+TGG | - | chr1_2:57632046-57632065 | None:intergenic | 25.0% |
| !! | ACATGTATGTTTTACAAATC+AGG | + | chr1_2:57632049-57632068 | Msa0079680:intron | 25.0% |
| ! | AAACAAATTCAAAAGAACTG+TGG | - | chr1_2:57632078-57632097 | None:intergenic | 25.0% |
| ! | TGTTATGAGTTTTTACCACT+CGG | - | chr1_2:57625056-57625075 | None:intergenic | 30.0% |
| !! | TGCGATTGGATTTTTCAATT+CGG | + | chr1_2:57625280-57625299 | Msa0079680:intron | 30.0% |
| CATAAACTAGCCAAACATTT+CGG | - | chr1_2:57625315-57625334 | None:intergenic | 30.0% | |
| CATCACAATTATTGAAATGC+AGG | + | chr1_2:57625529-57625548 | Msa0079680:intron | 30.0% | |
| ! | CTTTTGTCCAAATTCATACA+CGG | + | chr1_2:57625728-57625747 | Msa0079680:intron | 30.0% |
| ATTTCTTCCGTGTATGAATT+TGG | - | chr1_2:57625738-57625757 | None:intergenic | 30.0% | |
| GAAAATTCATTGGAAACGTT+TGG | + | chr1_2:57625924-57625943 | Msa0079680:intron | 30.0% | |
| !!! | GCGTCATAGTGTTTATTTTT+TGG | + | chr1_2:57626332-57626351 | Msa0079680:intron | 30.0% |
| AAAACATTGGTCAAAGAAAG+TGG | + | chr1_2:57626399-57626418 | Msa0079680:intron | 30.0% | |
| AAACTGTATTATATCTTGGC+TGG | + | chr1_2:57626741-57626760 | Msa0079680:intron | 30.0% | |
| GACCATGTATTATTGTGATA+TGG | + | chr1_2:57626835-57626854 | Msa0079680:intron | 30.0% | |
| GTCCATATCACAATAATACA+TGG | - | chr1_2:57626840-57626859 | None:intergenic | 30.0% | |
| CAATGATGTACAAAAAACGT+AGG | + | chr1_2:57626917-57626936 | Msa0079680:intron | 30.0% | |
| ATTGAACAATGAAGATCTAG+AGG | + | chr1_2:57626973-57626992 | Msa0079680:intron | 30.0% | |
| ATTGAACAATGAAGATCTAG+AGG | + | chr1_2:57626973-57626992 | Msa0079680:intron | 30.0% | |
| ! | AATACAAAATCCTCCCATTT+TGG | + | chr1_2:57627340-57627359 | Msa0079680:intron | 30.0% |
| ! | ATACAAAATCCTCCCATTTT+GGG | + | chr1_2:57627341-57627360 | Msa0079680:intron | 30.0% |
| ATGAGAAATACAGAGGAAAA+TGG | - | chr1_2:57627520-57627539 | None:intergenic | 30.0% | |
| ! | TTGTTGCTTATATATGAGAC+TGG | + | chr1_2:57627605-57627624 | Msa0079680:intron | 30.0% |
| GGTAGGAAATTGATAGATTA+AGG | - | chr1_2:57627695-57627714 | None:intergenic | 30.0% | |
| AAATGAAAGAGAGAGAACAA+TGG | + | chr1_2:57627797-57627816 | Msa0079680:intron | 30.0% | |
| TGAGTGTCTTTGTCAAATAT+TGG | + | chr1_2:57627823-57627842 | Msa0079680:intron | 30.0% | |
| ! | AGGGAGTACAATCAAATTTA+AGG | + | chr1_2:57628018-57628037 | Msa0079680:intron | 30.0% |
| AAGAATGGTGATTACTTAGT+GGG | - | chr1_2:57628051-57628070 | None:intergenic | 30.0% | |
| AGACTCATCTACAGTAATAA+TGG | - | chr1_2:57628204-57628223 | None:intergenic | 30.0% | |
| TATTACTGTAGATGAGTCTA+TGG | + | chr1_2:57628205-57628224 | Msa0079680:intron | 30.0% | |
| CCAACATGTCAGTTAAAAAT+AGG | - | chr1_2:57628412-57628431 | None:intergenic | 30.0% | |
| !!! | CCTATTTTTAACTGACATGT+TGG | + | chr1_2:57628409-57628428 | Msa0079680:intron | 30.0% |
| AGTTAAAGCTGTTTAGCTAT+GGG | + | chr1_2:57628440-57628459 | Msa0079680:intron | 30.0% | |
| ATGGGTCTCATTAGAATTAT+TGG | + | chr1_2:57628458-57628477 | Msa0079680:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr1_2:57628567-57628586 | Msa0079680:intron | 30.0% | |
| ATTTATCCTCCTTACAAAAC+CGG | - | chr1_2:57628614-57628633 | None:intergenic | 30.0% | |
| !! | AGTATTCATCTTAGCTCTAT+AGG | + | chr1_2:57628659-57628678 | Msa0079680:intron | 30.0% |
| ! | CTTAAATTGGATTAGGTGAA+AGG | - | chr1_2:57628694-57628713 | None:intergenic | 30.0% |
| !! | TTTTATACACTTAGGGCATT+TGG | + | chr1_2:57628835-57628854 | Msa0079680:intron | 30.0% |
| ! | TTTATACACTTAGGGCATTT+GGG | + | chr1_2:57628836-57628855 | Msa0079680:intron | 30.0% |
| ACTGATAAAAATGATACAGC+AGG | + | chr1_2:57628933-57628952 | Msa0079680:intron | 30.0% | |
| TCATATATAAAAAGACCGAC+TGG | + | chr1_2:57629006-57629025 | Msa0079680:intron | 30.0% | |
| CAAGGTTGGAAGTTATTTAA+TGG | - | chr1_2:57629343-57629362 | None:intergenic | 30.0% | |
| CATTAAATAACTTCCAACCT+TGG | + | chr1_2:57629341-57629360 | Msa0079680:intron | 30.0% | |
| ! | AAGAGGTCTTTTTATATGAG+TGG | - | chr1_2:57629402-57629421 | None:intergenic | 30.0% |
| TAATTCCTGAGTTTGATACT+CGG | - | chr1_2:57629446-57629465 | None:intergenic | 30.0% | |
| AAACTTGATATACATCATGG+TGG | - | chr1_2:57629534-57629553 | None:intergenic | 30.0% | |
| ATTTACCCATCAATAAAAGG+TGG | + | chr1_2:57629692-57629711 | Msa0079680:intron | 30.0% | |
| TTTACCCATCAATAAAAGGT+GGG | + | chr1_2:57629693-57629712 | Msa0079680:intron | 30.0% | |
| ! | AATCAGTGATAAATAGTGGA+AGG | + | chr1_2:57629749-57629768 | Msa0079680:intron | 30.0% |
| AGTTAATAACTTCATGTAGG+AGG | - | chr1_2:57629884-57629903 | None:intergenic | 30.0% | |
| TCCTACATGAAGTTATTAAC+TGG | + | chr1_2:57629883-57629902 | Msa0079680:intron | 30.0% | |
| ACCAGTTAATAACTTCATGT+AGG | - | chr1_2:57629887-57629906 | None:intergenic | 30.0% | |
| TCTGCAATTGCATTCAAAAA+GGG | - | chr1_2:57630202-57630221 | None:intergenic | 30.0% | |
| ATCTGCAATTGCATTCAAAA+AGG | - | chr1_2:57630203-57630222 | None:intergenic | 30.0% | |
| ATCATGAATCTACATTTGGA+GGG | + | chr1_2:57630426-57630445 | Msa0079680:CDS | 30.0% | |
| ACAAAATGGATATCATGCTA+GGG | - | chr1_2:57630571-57630590 | None:intergenic | 30.0% | |
| AACAAAATGGATATCATGCT+AGG | - | chr1_2:57630572-57630591 | None:intergenic | 30.0% | |
| TAATGTCATCAAGTAAGCAA+TGG | - | chr1_2:57630688-57630707 | None:intergenic | 30.0% | |
| AAATTGCCTGTATAATAGAC+AGG | - | chr1_2:57630715-57630734 | None:intergenic | 30.0% | |
| TGTCTATTATACAGGCAATT+TGG | + | chr1_2:57630714-57630733 | Msa0079680:intron | 30.0% | |
| ! | GGTCTTATCTTTAATCTAAG+TGG | - | chr1_2:57630856-57630875 | None:intergenic | 30.0% |
| ACTCATAATAAACTCTAGTC+AGG | - | chr1_2:57630877-57630896 | None:intergenic | 30.0% | |
| TGACTAGAGTTTATTATGAG+TGG | + | chr1_2:57630876-57630895 | Msa0079680:intron | 30.0% | |
| !!! | TGGTTTTGTAAGAATGTGTT+AGG | + | chr1_2:57630918-57630937 | Msa0079680:intron | 30.0% |
| TTTACCATGTCTTTCTTCTT+TGG | + | chr1_2:57631115-57631134 | Msa0079680:intron | 30.0% | |
| AATCAAAATGTGTTGCAAGA+TGG | + | chr1_2:57631187-57631206 | Msa0079680:intron | 30.0% | |
| AATATAATGTGATACCAACG+TGG | - | chr1_2:57631344-57631363 | None:intergenic | 30.0% | |
| !! | TGATTTTGGTCATTAGAATG+TGG | + | chr1_2:57631378-57631397 | Msa0079680:intron | 30.0% |
| ! | TAACATTTGAATTTGGTGAC+TGG | + | chr1_2:57631528-57631547 | Msa0079680:intron | 30.0% |
| ATGATAAACCATTATGAAGG+GGG | - | chr1_2:57631658-57631677 | None:intergenic | 30.0% | |
| ! | CACGAGAACATTTTCTATTA+GGG | - | chr1_2:57631709-57631728 | None:intergenic | 30.0% |
| ! | ACACGAGAACATTTTCTATT+AGG | - | chr1_2:57631710-57631729 | None:intergenic | 30.0% |
| ATGAGGCTGATTATATTCTT+TGG | + | chr1_2:57631762-57631781 | Msa0079680:intron | 30.0% | |
| TGAGGCTGATTATATTCTTT+GGG | + | chr1_2:57631763-57631782 | Msa0079680:intron | 30.0% | |
| ! | ATTCTTAACATGTGCCATTA+GGG | + | chr1_2:57631929-57631948 | Msa0079680:intron | 30.0% |
| !! | TCTTTTGAATTTGTTTCACC+AGG | + | chr1_2:57632082-57632101 | Msa0079680:intron | 30.0% |
| TTAAATAGAATTCACCATCC+TGG | - | chr1_2:57632103-57632122 | None:intergenic | 30.0% | |
| TCTTCGTGATAATATTCTGA+AGG | + | chr1_2:57632175-57632194 | Msa0079680:intron | 30.0% | |
| !!! | ATATTCTGAAGGTGTTTTAC+AGG | + | chr1_2:57632186-57632205 | Msa0079680:intron | 30.0% |
| ! | GTTCATTTTGTCCAATTATG+TGG | + | chr1_2:57632208-57632227 | Msa0079680:CDS | 30.0% |
| ! | TTATGAGTTTTTACCACTCG+GGG | - | chr1_2:57625054-57625073 | None:intergenic | 35.0% |
| ! | GTTATGAGTTTTTACCACTC+GGG | - | chr1_2:57625055-57625074 | None:intergenic | 35.0% |
| AAATTCTTCTGCATTGCGAT+TGG | + | chr1_2:57625266-57625285 | Msa0079680:intron | 35.0% | |
| GTGCGAATGAATTCAATTCT+AGG | + | chr1_2:57625429-57625448 | Msa0079680:intron | 35.0% | |
| ATTTAGGAAACTGTCAGTGA+CGG | + | chr1_2:57625486-57625505 | Msa0079680:intron | 35.0% | |
| TGATGCCTGGATCAATATTT+AGG | + | chr1_2:57625605-57625624 | Msa0079680:intron | 35.0% | |
| GATGCCTGGATCAATATTTA+GGG | + | chr1_2:57625606-57625625 | Msa0079680:intron | 35.0% | |
| ACTTCCCTAAATATTGATCC+AGG | - | chr1_2:57625613-57625632 | None:intergenic | 35.0% | |
| ! | GAAGTGTTTGTGAATTGTGA+CGG | + | chr1_2:57625628-57625647 | Msa0079680:intron | 35.0% |
| GCTAGTGACAGAAAATTCAT+TGG | + | chr1_2:57625914-57625933 | Msa0079680:intron | 35.0% | |
| !! | GTGCTTTGTTCGAATTTTGA+TGG | + | chr1_2:57626007-57626026 | Msa0079680:intron | 35.0% |
| TCATTATGCGCAATTTCACT+AGG | - | chr1_2:57626092-57626111 | None:intergenic | 35.0% | |
| !! | AATCTTTTTGATGGCATGTG+AGG | + | chr1_2:57626124-57626143 | Msa0079680:CDS | 35.0% |
| TCCAATAATGCTAAGCTTGA+CGG | - | chr1_2:57626156-57626175 | None:intergenic | 35.0% | |
| AATCGATATGGCCAAAAGTA+AGG | - | chr1_2:57626312-57626331 | None:intergenic | 35.0% | |
| AATAGCAATCAAGCATAGCA+AGG | - | chr1_2:57626358-57626377 | None:intergenic | 35.0% | |
| TTCTTATACATGAGACCAGA+TGG | - | chr1_2:57626381-57626400 | None:intergenic | 35.0% | |
| ! | TTGCTTATATTTGAGACCAG+AGG | + | chr1_2:57626453-57626472 | Msa0079680:intron | 35.0% |
| ! | TGCTTATATTTGAGACCAGA+GGG | + | chr1_2:57626454-57626473 | Msa0079680:intron | 35.0% |
| ATGGCTGAGTTCAATTATAG+AGG | + | chr1_2:57626491-57626510 | Msa0079680:intron | 35.0% | |
| ! | TGAAACTAACCTCGTTTTCA+GGG | - | chr1_2:57626684-57626703 | None:intergenic | 35.0% |
| ! | TTGAAACTAACCTCGTTTTC+AGG | - | chr1_2:57626685-57626704 | None:intergenic | 35.0% |
| ATCTTACCTACTACATTCCA+GGG | - | chr1_2:57626767-57626786 | None:intergenic | 35.0% | |
| TATCTTACCTACTACATTCC+AGG | - | chr1_2:57626768-57626787 | None:intergenic | 35.0% | |
| ! | CTGAATTCGACAATTTTACG+TGG | + | chr1_2:57626881-57626900 | Msa0079680:intron | 35.0% |
| AAGATCTAGAGGACTTTGAA+AGG | + | chr1_2:57626984-57627003 | Msa0079680:intron | 35.0% | |
| ! | AGATCTAGAGGACTTTGAAA+GGG | + | chr1_2:57626985-57627004 | Msa0079680:intron | 35.0% |
| AAAATCCTCCCAATTCTCAT+TGG | + | chr1_2:57627042-57627061 | Msa0079680:intron | 35.0% | |
| AAATCCTCCCAATTCTCATT+GGG | + | chr1_2:57627043-57627062 | Msa0079680:intron | 35.0% | |
| AAGATCTAGAGGACTTTGAA+AGG | + | chr1_2:57626984-57627003 | Msa0079680:intron | 35.0% | |
| ! | AGATCTAGAGGACTTTGAAA+GGG | + | chr1_2:57626985-57627004 | Msa0079680:intron | 35.0% |
| ! | TACAAAATCCTCCCATTTTG+GGG | + | chr1_2:57627342-57627361 | Msa0079680:intron | 35.0% |
| ! | AATTTGAGTTCCCCCAAAAT+GGG | - | chr1_2:57627356-57627375 | None:intergenic | 35.0% |
| AACTCAAATTGTATTGGAGG+AGG | + | chr1_2:57627366-57627385 | Msa0079680:intron | 35.0% | |
| ACTCAAATTGTATTGGAGGA+GGG | + | chr1_2:57627367-57627386 | Msa0079680:intron | 35.0% | |
| TTTGGAGATGAGAAATACAG+AGG | - | chr1_2:57627527-57627546 | None:intergenic | 35.0% | |
| TTGCTTATATATGAGACTGG+AGG | + | chr1_2:57627608-57627627 | Msa0079680:intron | 35.0% | |
| TGCTTATATATGAGACTGGA+GGG | + | chr1_2:57627609-57627628 | Msa0079680:intron | 35.0% | |
| ! | TCAACTGGCTCAATTAAACT+GGG | - | chr1_2:57627748-57627767 | None:intergenic | 35.0% |
| !! | ATGGCTTAGTTTTTATGGGA+CGG | + | chr1_2:57627995-57628014 | Msa0079680:intron | 35.0% |
| CAAGAATGGTGATTACTTAG+TGG | - | chr1_2:57628052-57628071 | None:intergenic | 35.0% | |
| CCTTCTACAGTATTCAAGAA+TGG | - | chr1_2:57628066-57628085 | None:intergenic | 35.0% | |
| CCATTCTTGAATACTGTAGA+AGG | + | chr1_2:57628063-57628082 | Msa0079680:intron | 35.0% | |
| TGTGTCGAACCAAAGAAAAA+AGG | + | chr1_2:57628250-57628269 | Msa0079680:intron | 35.0% | |
| AAGGTTGAATCTATGAAGCA+CGG | - | chr1_2:57628387-57628406 | None:intergenic | 35.0% | |
| GAGTTAAAGCTGTTTAGCTA+TGG | + | chr1_2:57628439-57628458 | Msa0079680:intron | 35.0% | |
| ATTGGTTAAGTCAATACGCA+CGG | + | chr1_2:57628476-57628495 | Msa0079680:intron | 35.0% | |
| TTGCTTATAACAGTGATCAG+AGG | - | chr1_2:57628524-57628543 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr1_2:57628570-57628589 | Msa0079680:intron | 35.0% | |
| ! | TTGGATTAGGTGAAAGGTAT+GGG | - | chr1_2:57628688-57628707 | None:intergenic | 35.0% |
| ! | ATTGGATTAGGTGAAAGGTA+TGG | - | chr1_2:57628689-57628708 | None:intergenic | 35.0% |
| TAATACAACATCCAGCCAAA+TGG | + | chr1_2:57628883-57628902 | Msa0079680:intron | 35.0% | |
| ! | CACATAATGATTTGGCCATT+TGG | - | chr1_2:57628901-57628920 | None:intergenic | 35.0% |
| AATATTATGCAGTCCACGTT+TGG | + | chr1_2:57628967-57628986 | Msa0079680:intron | 35.0% | |
| CATTGAAATTGAACCAAACG+TGG | - | chr1_2:57628983-57629002 | None:intergenic | 35.0% | |
| ACATAATCATACAAGGTCCA+AGG | - | chr1_2:57629361-57629380 | None:intergenic | 35.0% | |
| CTTGGTCACATAATCATACA+AGG | - | chr1_2:57629368-57629387 | None:intergenic | 35.0% | |
| ! | GGTCTTTTTATATGAGTGGA+AGG | - | chr1_2:57629398-57629417 | None:intergenic | 35.0% |
| TTTGATTCAGTCCCTATAAG+AGG | - | chr1_2:57629419-57629438 | None:intergenic | 35.0% | |
| ! | TCTACCCACCTTTTATTGAT+GGG | - | chr1_2:57629700-57629719 | None:intergenic | 35.0% |
| !! | GGCAAATGACTGATTTTGAT+TGG | + | chr1_2:57629770-57629789 | Msa0079680:intron | 35.0% |
| ACCTGATGACTGTTATTGTT+TGG | + | chr1_2:57629926-57629945 | Msa0079680:intron | 35.0% | |
| ACCAAACAATAACAGTCATC+AGG | - | chr1_2:57629930-57629949 | None:intergenic | 35.0% | |
| ACTCAGACAAATTGATGCTT+CGG | - | chr1_2:57630171-57630190 | None:intergenic | 35.0% | |
| CTGCAATTGCATTCAAAAAG+GGG | - | chr1_2:57630201-57630220 | None:intergenic | 35.0% | |
| CATGAAAATGAAACCCATGA+AGG | - | chr1_2:57630233-57630252 | None:intergenic | 35.0% | |
| CTGTCAGCACATTACAATAA+GGG | + | chr1_2:57630278-57630297 | Msa0079680:intron | 35.0% | |
| GATCATGAATCTACATTTGG+AGG | + | chr1_2:57630425-57630444 | Msa0079680:CDS | 35.0% | |
| TGGATCTGTATGTGCTTATT+TGG | + | chr1_2:57630532-57630551 | Msa0079680:intron | 35.0% | |
| AAAATGGATATCATGCTAGG+GGG | - | chr1_2:57630569-57630588 | None:intergenic | 35.0% | |
| CAAAATGGATATCATGCTAG+GGG | - | chr1_2:57630570-57630589 | None:intergenic | 35.0% | |
| TAGCTTCCTGTCTATTATAC+AGG | + | chr1_2:57630706-57630725 | Msa0079680:intron | 35.0% | |
| TCTTTAATCTAAGTGGGACT+TGG | - | chr1_2:57630849-57630868 | None:intergenic | 35.0% | |
| TCTTACAAAACCAGCTTGTA+GGG | - | chr1_2:57630911-57630930 | None:intergenic | 35.0% | |
| TTCTTACAAAACCAGCTTGT+AGG | - | chr1_2:57630912-57630931 | None:intergenic | 35.0% | |
| TAATACTGATCATGGGTTCA+TGG | - | chr1_2:57631050-57631069 | None:intergenic | 35.0% | |
| TCAACCAAAGAAGAAAGACA+TGG | - | chr1_2:57631122-57631141 | None:intergenic | 35.0% | |
| TGATAAACCATTATGAAGGG+GGG | - | chr1_2:57631657-57631676 | None:intergenic | 35.0% | |
| AGGGAATTAATATCTGCATG+AGG | - | chr1_2:57631690-57631709 | None:intergenic | 35.0% | |
| CATGTTAAGAATGCCACTAA+TGG | - | chr1_2:57631921-57631940 | None:intergenic | 35.0% | |
| ! | CATTCTTAACATGTGCCATT+AGG | + | chr1_2:57631928-57631947 | Msa0079680:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTAA+TGG | - | chr1_2:57631946-57631965 | None:intergenic | 35.0% |
| ! | TTGAATTTGTTTCACCAGGA+TGG | + | chr1_2:57632086-57632105 | Msa0079680:intron | 35.0% |
| TCTGAAAACAGCCACATAAT+TGG | - | chr1_2:57632222-57632241 | None:intergenic | 35.0% | |
| GAACTATGTGCCGAAATGTT+TGG | + | chr1_2:57625302-57625321 | Msa0079680:intron | 40.0% | |
| GTCAATTGTTGAATGATGCC+TGG | + | chr1_2:57625592-57625611 | Msa0079680:intron | 40.0% | |
| ! | AGATGCAGGAAGTGTGATAT+TGG | + | chr1_2:57625685-57625704 | Msa0079680:intron | 40.0% |
| ACCGTCAAGCTTAGCATTAT+TGG | + | chr1_2:57626152-57626171 | Msa0079680:CDS | 40.0% | |
| !!! | TGGTTTTGAAATTTGCACCG+TGG | + | chr1_2:57626286-57626305 | Msa0079680:intron | 40.0% |
| ACACTATGACGCAATCGATA+TGG | - | chr1_2:57626324-57626343 | None:intergenic | 40.0% | |
| ! | TGCTTGATTGCTATTCCATC+TGG | + | chr1_2:57626363-57626382 | Msa0079680:intron | 40.0% |
| ! | GCTTATATTTGAGACCAGAG+GGG | + | chr1_2:57626455-57626474 | Msa0079680:intron | 40.0% |
| ! | CTTATATTTGAGACCAGAGG+GGG | + | chr1_2:57626456-57626475 | Msa0079680:intron | 40.0% |
| TAGAGGATTTATGCAAGAGC+CGG | + | chr1_2:57626508-57626527 | Msa0079680:intron | 40.0% | |
| ! | TAGAGGACTTTGAAAGGGAA+AGG | + | chr1_2:57626990-57627009 | Msa0079680:intron | 40.0% |
| ! | ACTTTGAAAGGGAAAGGCTT+TGG | + | chr1_2:57626996-57627015 | Msa0079680:intron | 40.0% |
| CTTTGGACCCAATGAGAATT+GGG | - | chr1_2:57627053-57627072 | None:intergenic | 40.0% | |
| TCTTTGGACCCAATGAGAAT+TGG | - | chr1_2:57627054-57627073 | None:intergenic | 40.0% | |
| GATAACAGACAAAAACGACG+TGG | - | chr1_2:57627113-57627132 | None:intergenic | 40.0% | |
| CTGTTATCTGCTCGTATTTG+CGG | + | chr1_2:57627125-57627144 | Msa0079680:intron | 40.0% | |
| ! | ACTTTGAAAGGGAAGGCTTT+GGG | + | chr1_2:57627300-57627319 | Msa0079680:intron | 40.0% |
| ! | ACAAAATCCTCCCATTTTGG+GGG | + | chr1_2:57627343-57627362 | Msa0079680:intron | 40.0% |
| ! | CAATTTGAGTTCCCCCAAAA+TGG | - | chr1_2:57627357-57627376 | None:intergenic | 40.0% |
| TGGGGGAACTCAAATTGTAT+TGG | + | chr1_2:57627360-57627379 | Msa0079680:intron | 40.0% | |
| GGGAACTCAAATTGTATTGG+AGG | + | chr1_2:57627363-57627382 | Msa0079680:intron | 40.0% | |
| !!! | CCTTGTTTAGGAGTTTTGAG+GGG | - | chr1_2:57627561-57627580 | None:intergenic | 40.0% |
| !!! | GCCTTGTTTAGGAGTTTTGA+GGG | - | chr1_2:57627562-57627581 | None:intergenic | 40.0% |
| AACTCCTAAACAAGGCCTTA+AGG | + | chr1_2:57627566-57627585 | Msa0079680:intron | 40.0% | |
| ACTCCTAAACAAGGCCTTAA+GGG | + | chr1_2:57627567-57627586 | Msa0079680:intron | 40.0% | |
| GAAATAATTCACGCCCCTTA+AGG | - | chr1_2:57627584-57627603 | None:intergenic | 40.0% | |
| CTCAATTAAACTGGGATGGA+GGG | - | chr1_2:57627740-57627759 | None:intergenic | 40.0% | |
| ! | GTCAACTGGCTCAATTAAAC+TGG | - | chr1_2:57627749-57627768 | None:intergenic | 40.0% |
| ATCTGTGTGAAATGGTCAAC+TGG | - | chr1_2:57627763-57627782 | None:intergenic | 40.0% | |
| !! | CTTAGTTTTTATGGGACGGA+GGG | + | chr1_2:57627999-57628018 | Msa0079680:intron | 40.0% |
| !! | ACAAGTGTCGGATAACTCAA+AGG | - | chr1_2:57628292-57628311 | None:intergenic | 40.0% |
| GTATAGTTATGTACTCCCTC+TGG | + | chr1_2:57628498-57628517 | Msa0079680:intron | 40.0% | |
| TGGCTGGATGTTGTATTACA+TGG | - | chr1_2:57628881-57628900 | None:intergenic | 40.0% | |
| ! | TAATGATTTGGCCATTTGGC+TGG | - | chr1_2:57628897-57628916 | None:intergenic | 40.0% |
| CATGTAAAGGTGATTCCAGT+CGG | - | chr1_2:57629024-57629043 | None:intergenic | 40.0% | |
| GATACTATGTCTCAAGCTCT+TGG | + | chr1_2:57629087-57629106 | Msa0079680:CDS | 40.0% | |
| !! | GTGTGACTTTTTAAGCAGTC+AGG | + | chr1_2:57629314-57629333 | Msa0079680:intron | 40.0% |
| AATCATACAAGGTCCAAGGT+TGG | - | chr1_2:57629357-57629376 | None:intergenic | 40.0% | |
| TGAGTGGAAGGAATAGATCT+TGG | - | chr1_2:57629386-57629405 | None:intergenic | 40.0% | |
| ATACACCGAGTATCAAACTC+AGG | + | chr1_2:57629438-57629457 | Msa0079680:intron | 40.0% | |
| ! | CTCTACCCACCTTTTATTGA+TGG | - | chr1_2:57629701-57629720 | None:intergenic | 40.0% |
| TAGAGTTACCCATGTTGAGT+TGG | - | chr1_2:57629798-57629817 | None:intergenic | 40.0% | |
| TCTGAATTCAACAGTCGGTT+TGG | + | chr1_2:57629849-57629868 | Msa0079680:intron | 40.0% | |
| ! | CCCTCCATAACCAAATTTTC+CGG | - | chr1_2:57630110-57630129 | None:intergenic | 40.0% |
| CCGGAAAATTTGGTTATGGA+GGG | + | chr1_2:57630107-57630126 | Msa0079680:CDS | 40.0% | |
| ! | TCACGGACTAATTCAGTTAC+TGG | + | chr1_2:57630136-57630155 | Msa0079680:CDS | 40.0% |
| TGCAGATCACTATTCCTTCA+TGG | + | chr1_2:57630216-57630235 | Msa0079680:intron | 40.0% | |
| GCAGATCACTATTCCTTCAT+GGG | + | chr1_2:57630217-57630236 | Msa0079680:intron | 40.0% | |
| ! | CCTTATTGTAATGTGCTGAC+AGG | - | chr1_2:57630280-57630299 | None:intergenic | 40.0% |
| CCTGTCAGCACATTACAATA+AGG | + | chr1_2:57630277-57630296 | Msa0079680:intron | 40.0% | |
| TTGACTGAAACTGGGAAACT+TGG | + | chr1_2:57630470-57630489 | Msa0079680:CDS | 40.0% | |
| TGACTGAAACTGGGAAACTT+GGG | + | chr1_2:57630471-57630490 | Msa0079680:CDS | 40.0% | |
| GCACAAGAAAACAATGGAAC+AGG | - | chr1_2:57631007-57631026 | None:intergenic | 40.0% | |
| CTACATGGTCTGTGTTAAGT+AGG | - | chr1_2:57631320-57631339 | None:intergenic | 40.0% | |
| GATAAACCATTATGAAGGGG+GGG | - | chr1_2:57631656-57631675 | None:intergenic | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr1_2:57631786-57631805 | Msa0079680:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr1_2:57631787-57631806 | Msa0079680:intron | 40.0% |
| ATGCTTAACATGTGCCCTAA+GGG | - | chr1_2:57631804-57631823 | None:intergenic | 40.0% | |
| AATGCTTAACATGTGCCCTA+AGG | - | chr1_2:57631805-57631824 | None:intergenic | 40.0% | |
| TTCTTCCGAGATGGCTTTCA+TGG | + | chr1_2:57625109-57625128 | Msa0079680:exon | 45.0% | |
| CGCTATCCAGCTGTTAAAGA+CGG | + | chr1_2:57625179-57625198 | Msa0079680:CDS | 45.0% | |
| TGCAGAGCATGCTATTCTCA+AGG | + | chr1_2:57625202-57625221 | Msa0079680:CDS | 45.0% | |
| CATTTCTCCATCTGCTACGA+GGG | + | chr1_2:57626211-57626230 | Msa0079680:CDS | 45.0% | |
| AAAATCTCCCTCGTAGCAGA+TGG | - | chr1_2:57626221-57626240 | None:intergenic | 45.0% | |
| TATGGCCAAAAGTAAGGCCA+CGG | - | chr1_2:57626306-57626325 | None:intergenic | 45.0% | |
| ACGATTACACCCTGAAAACG+AGG | + | chr1_2:57626672-57626691 | Msa0079680:CDS | 45.0% | |
| ! | TATTATATCTTGGCTGGCCC+TGG | + | chr1_2:57626747-57626766 | Msa0079680:intron | 45.0% |
| GTGTGTGTGTGTGTCAAAGT+TGG | - | chr1_2:57626946-57626965 | None:intergenic | 45.0% | |
| !!! | CGACGTGGTTTTAACCTCAA+TGG | - | chr1_2:57627098-57627117 | None:intergenic | 45.0% |
| GTGTGTGTGTGTGTCGAAAT+TGG | - | chr1_2:57627248-57627267 | None:intergenic | 45.0% | |
| ! | CTAGAGGACTTTGAAAGGGA+AGG | + | chr1_2:57626989-57627008 | Msa0079680:intron | 45.0% |
| ! | GACTTTGAAAGGGAAGGCTT+TGG | + | chr1_2:57627299-57627318 | Msa0079680:intron | 45.0% |
| ! | CTTTGAAAGGGAAGGCTTTG+GGG | + | chr1_2:57627301-57627320 | Msa0079680:intron | 45.0% |
| !!! | TTTAGGAGTTTTGAGGGGAG+GGG | - | chr1_2:57627556-57627575 | None:intergenic | 45.0% |
| !!! | GTTTAGGAGTTTTGAGGGGA+GGG | - | chr1_2:57627557-57627576 | None:intergenic | 45.0% |
| !!! | TGTTTAGGAGTTTTGAGGGG+AGG | - | chr1_2:57627558-57627577 | None:intergenic | 45.0% |
| CCCCTCAAAACTCCTAAACA+AGG | + | chr1_2:57627558-57627577 | Msa0079680:intron | 45.0% | |
| !!! | GGCCTTGTTTAGGAGTTTTG+AGG | - | chr1_2:57627563-57627582 | None:intergenic | 45.0% |
| CTCCTAAACAAGGCCTTAAG+GGG | + | chr1_2:57627568-57627587 | Msa0079680:intron | 45.0% | |
| GCTCAATTAAACTGGGATGG+AGG | - | chr1_2:57627741-57627760 | None:intergenic | 45.0% | |
| CTGGCTCAATTAAACTGGGA+TGG | - | chr1_2:57627744-57627763 | None:intergenic | 45.0% | |
| !! | GCTTAGTTTTTATGGGACGG+AGG | + | chr1_2:57627998-57628017 | Msa0079680:intron | 45.0% |
| !! | GTGTGTCTGAGAAGTGTTGA+AGG | + | chr1_2:57628227-57628246 | Msa0079680:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1_2:57628605-57628624 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1_2:57628602-57628621 | Msa0079680:intron | 45.0% |
| !! | TACAAGCCGGTTTTGTAAGG+AGG | + | chr1_2:57628605-57628624 | Msa0079680:intron | 45.0% |
| ! | ACTTAGGGCATTTGGGTCAT+TGG | + | chr1_2:57628843-57628862 | Msa0079680:intron | 45.0% |
| ! | GCATTTGGGTCATTGGTGTT+TGG | + | chr1_2:57628850-57628869 | Msa0079680:intron | 45.0% |
| TAGAGTTACCCATGCTGAGT+TGG | + | chr1_2:57629716-57629735 | Msa0079680:intron | 45.0% | |
| !! | TGATTGGTGCCAACTCAACA+TGG | + | chr1_2:57629786-57629805 | Msa0079680:intron | 45.0% |
| !! | GATTGGTGCCAACTCAACAT+GGG | + | chr1_2:57629787-57629806 | Msa0079680:intron | 45.0% |
| AACCACTTGGTCGAAAACCA+AGG | - | chr1_2:57630068-57630087 | None:intergenic | 45.0% | |
| ! | GGTTTTCGACCAAGTGGTTT+TGG | + | chr1_2:57630069-57630088 | Msa0079680:CDS | 45.0% |
| TCTCTTCCTGCCGGAAAATT+TGG | + | chr1_2:57630097-57630116 | Msa0079680:CDS | 45.0% | |
| ! | CCATAACCAAATTTTCCGGC+AGG | - | chr1_2:57630106-57630125 | None:intergenic | 45.0% |
| CCTGCCGGAAAATTTGGTTA+TGG | + | chr1_2:57630103-57630122 | Msa0079680:CDS | 45.0% | |
| GCCGGAAAATTTGGTTATGG+AGG | + | chr1_2:57630106-57630125 | Msa0079680:CDS | 45.0% | |
| TGCGCGTAAACATTGTTCAG+AGG | + | chr1_2:57630738-57630757 | Msa0079680:CDS | 45.0% | |
| AAAACCAGCTTGTAGGGTGA+GGG | - | chr1_2:57630905-57630924 | None:intergenic | 45.0% | |
| TGGAACAGGTAGTTGAATCG+AGG | - | chr1_2:57630993-57631012 | None:intergenic | 45.0% | |
| CATGGGTTCATGGTTCAATC+AGG | - | chr1_2:57631040-57631059 | None:intergenic | 45.0% | |
| ! | TGATACCAACGTGGACTACA+TGG | - | chr1_2:57631335-57631354 | None:intergenic | 45.0% |
| !! | TTGGTGACTGGAAGCATTAG+AGG | + | chr1_2:57631540-57631559 | Msa0079680:intron | 45.0% |
| GGCTTGAAACGCTATGTAAG+TGG | - | chr1_2:57632025-57632044 | None:intergenic | 45.0% | |
| ! | GAGTTTTTACCACTCGGGGA+AGG | - | chr1_2:57625050-57625069 | None:intergenic | 50.0% |
| TTCCGAGATGGCTTTCATGG+CGG | + | chr1_2:57625112-57625131 | Msa0079680:exon | 50.0% | |
| TCTGCACCGTCTTTAACAGC+TGG | - | chr1_2:57625188-57625207 | None:intergenic | 50.0% | |
| GCATGCTATTCTCAAGGTGC+TGG | + | chr1_2:57625208-57625227 | Msa0079680:intron | 50.0% | |
| CCTCGTAGCAGATGGAGAAA+TGG | - | chr1_2:57626213-57626232 | None:intergenic | 50.0% | |
| CCATTTCTCCATCTGCTACG+AGG | + | chr1_2:57626210-57626229 | Msa0079680:CDS | 50.0% | |
| !! | TTGCACCGTGGCCTTACTTT+TGG | + | chr1_2:57626298-57626317 | Msa0079680:intron | 50.0% |
| ! | TCGAATCAAAGTACCCCCTC+TGG | - | chr1_2:57626472-57626491 | None:intergenic | 50.0% |
| !! | GAGGGGGTACTTTGATTCGA+TGG | + | chr1_2:57626472-57626491 | Msa0079680:intron | 50.0% |
| ACCCTTGCAGCATGCTGAAA+TGG | + | chr1_2:57626594-57626613 | Msa0079680:intron | 50.0% | |
| GCCATTTCAGCATGCTGCAA+GGG | - | chr1_2:57626598-57626617 | None:intergenic | 50.0% | |
| CTTGCAGCATGCTGAAATGG+CGG | + | chr1_2:57626597-57626616 | Msa0079680:intron | 50.0% | |
| !! | CATGCTGAAATGGCGGATGA+GGG | + | chr1_2:57626604-57626623 | Msa0079680:CDS | 50.0% |
| TGGACCCAATGAGAATTGGG+AGG | - | chr1_2:57627050-57627069 | None:intergenic | 50.0% | |
| TTGAGTTCCCCCAAAATGGG+AGG | - | chr1_2:57627353-57627372 | None:intergenic | 50.0% | |
| GACGCTCGTACAACAAGTGT+CGG | - | chr1_2:57628304-57628323 | None:intergenic | 50.0% | |
| TACGAGCGTCATACAAGTGC+CGG | + | chr1_2:57628314-57628333 | Msa0079680:intron | 50.0% | |
| ACTGACGTGTGTCCAACACT+AGG | + | chr1_2:57628339-57628358 | Msa0079680:intron | 50.0% | |
| AACAGTGATCAGAGGCCAGA+GGG | - | chr1_2:57628516-57628535 | None:intergenic | 50.0% | |
| TAACAGTGATCAGAGGCCAG+AGG | - | chr1_2:57628517-57628536 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1_2:57628600-57628619 | None:intergenic | 50.0% |
| AAGCTCTTGGCATCTGTCTC+AGG | + | chr1_2:57629100-57629119 | Msa0079680:CDS | 50.0% | |
| !! | GATTGGTGCCAACTCAGCAT+GGG | - | chr1_2:57629727-57629746 | None:intergenic | 50.0% |
| !! | TGATTGGTGCCAACTCAGCA+TGG | - | chr1_2:57629728-57629747 | None:intergenic | 50.0% |
| !! | TGCCTTGGTTTTCGACCAAG+TGG | + | chr1_2:57630063-57630082 | Msa0079680:CDS | 50.0% |
| GAGACTCAGCCAAAACCACT+TGG | - | chr1_2:57630081-57630100 | None:intergenic | 50.0% | |
| AACGTCTCCCTCATCACATG+AGG | - | chr1_2:57630452-57630471 | None:intergenic | 50.0% | |
| ! | AGGGAGACGTTGACTGAAAC+TGG | + | chr1_2:57630461-57630480 | Msa0079680:CDS | 50.0% |
| ! | GGGAGACGTTGACTGAAACT+GGG | + | chr1_2:57630462-57630481 | Msa0079680:CDS | 50.0% |
| AAACCAGCTTGTAGGGTGAG+GGG | - | chr1_2:57630904-57630923 | None:intergenic | 50.0% | |
| CAAAACCAGCTTGTAGGGTG+AGG | - | chr1_2:57630906-57630925 | None:intergenic | 50.0% | |
| ACAGACCATGTAGTCCACGT+TGG | + | chr1_2:57631327-57631346 | Msa0079680:intron | 50.0% | |
| ACACGTGAGTCACTGCGTTG+CGG | + | chr1_2:57624976-57624995 | Msa0079680:five_prime_UTR | 55.0% | |
| CGAGTGAGGACTCTTCGTCA+GGG | - | chr1_2:57625089-57625108 | None:intergenic | 55.0% | |
| ACGAGTGAGGACTCTTCGTC+AGG | - | chr1_2:57625090-57625109 | None:intergenic | 55.0% | |
| CCATCTCGGAAGAACGAGTG+AGG | - | chr1_2:57625103-57625122 | None:intergenic | 55.0% | |
| CCTCACTCGTTCTTCCGAGA+TGG | + | chr1_2:57625100-57625119 | Msa0079680:exon | 55.0% | |
| GACCGCCATGAAAGCCATCT+CGG | - | chr1_2:57625117-57625136 | None:intergenic | 55.0% | |
| GATGGCTTTCATGGCGGTCT+TGG | + | chr1_2:57625118-57625137 | Msa0079680:exon | 55.0% | |
| TGGATAGCGACGTCGAGCTT+CGG | - | chr1_2:57625168-57625187 | None:intergenic | 55.0% | |
| TGCTGCAAGGGTTAAGCAGC+AGG | - | chr1_2:57626586-57626605 | None:intergenic | 55.0% | |
| CGCCATTTCAGCATGCTGCA+AGG | - | chr1_2:57626599-57626618 | None:intergenic | 55.0% | |
| !! | GCATGCTGAAATGGCGGATG+AGG | + | chr1_2:57626603-57626622 | Msa0079680:intron | 55.0% |
| !! | CGCCCCTTAAGGCCTTGTTT+AGG | - | chr1_2:57627573-57627592 | None:intergenic | 55.0% |
| GTTGGACACACGTCAGTGTC+CGG | - | chr1_2:57628336-57628355 | None:intergenic | 55.0% | |
| GATTAGGCGCGTCCTAGTGT+TGG | - | chr1_2:57628354-57628373 | None:intergenic | 55.0% | |
| ACTAGGACGCGCCTAATCTG+AGG | + | chr1_2:57628356-57628375 | Msa0079680:intron | 55.0% | |
| GCACGGACACTCCTCAGATT+AGG | - | chr1_2:57628370-57628389 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | + | chr1_2:57628592-57628611 | Msa0079680:intron | 55.0% | |
| GTACTGCTGCAGCTACCTTC+AGG | + | chr1_2:57630032-57630051 | Msa0079680:intron | 55.0% | |
| CAAGGCAACTGCTTGCCTGA+AGG | - | chr1_2:57630050-57630069 | None:intergenic | 55.0% | |
| CTTCAGGCAAGCAGTTGCCT+TGG | + | chr1_2:57630048-57630067 | Msa0079680:CDS | 55.0% | |
| TTGGCTGAGTCTCTTCCTGC+CGG | + | chr1_2:57630088-57630107 | Msa0079680:CDS | 55.0% | |
| GTTATGGAGGGCAGCTCTCA+CGG | + | chr1_2:57630119-57630138 | Msa0079680:CDS | 55.0% | |
| TTGGAGGGCCTCATGTGATG+AGG | + | chr1_2:57630441-57630460 | Msa0079680:CDS | 55.0% | |
| TGGAGGGCCTCATGTGATGA+GGG | + | chr1_2:57630442-57630461 | Msa0079680:CDS | 55.0% | |
| GACCTGACATCTCTTGCTGC+AGG | + | chr1_2:57630509-57630528 | Msa0079680:CDS | 55.0% | |
| CACCTGCAGCAAGAGATGTC+AGG | - | chr1_2:57630514-57630533 | None:intergenic | 55.0% | |
| CTGACATCTCTTGCTGCAGG+TGG | + | chr1_2:57630512-57630531 | Msa0079680:CDS | 55.0% | |
| CCATTATGAAGGGGGGGAAC+TGG | - | chr1_2:57631650-57631669 | None:intergenic | 55.0% | |
| CCAGTTCCCCCCCTTCATAA+TGG | + | chr1_2:57631647-57631666 | Msa0079680:intron | 55.0% | |
| GCAACGCAGTGACTCACGTG+TGG | - | chr1_2:57624977-57624996 | None:intergenic | 60.0% | |
| ACCACACTTCCTTCCCCGAG+TGG | + | chr1_2:57625038-57625057 | Msa0079680:five_prime_UTR | 60.0% | |
| ACCACTCGGGGAAGGAAGTG+TGG | - | chr1_2:57625042-57625061 | None:intergenic | 60.0% | |
| ATAGCGACGTCGAGCTTCGG+CGG | - | chr1_2:57625165-57625184 | None:intergenic | 60.0% | |
| ! | GGCTGGCCCTGGAATGTAGT+AGG | + | chr1_2:57626758-57626777 | Msa0079680:intron | 60.0% |
| !!! | GGAGTTTTGAGGGGAGGGGA+GGG | - | chr1_2:57627552-57627571 | None:intergenic | 60.0% |
| !!! | AGGAGTTTTGAGGGGAGGGG+AGG | - | chr1_2:57627553-57627572 | None:intergenic | 60.0% |
| ! | TGAGGGGAGGGGAGGGCTTT+TGG | - | chr1_2:57627545-57627564 | None:intergenic | 65.0% |
| GCACCCCTCACCCTACAAGC+TGG | + | chr1_2:57630898-57630917 | Msa0079680:intron | 65.0% | |
| GAGCTTCGGCGGAGAGAGCG+CGG | - | chr1_2:57625154-57625173 | None:intergenic | 70.0% | |
| ! | CTTCGGCGGAGAGAGCGCGG+AGG | - | chr1_2:57625151-57625170 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 57624969 | 57632256 | 57624969 | ID=Msa0079680;Name=Msa0079680 |
| chr1_2 | mRNA | 57624969 | 57632256 | 57624969 | ID=Msa0079680-mRNA-1;Parent=Msa0079680;Name=Msa0079680-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|0.85|0.75|1|0.57|0.62|8|0|277 |
| chr1_2 | exon | 57624969 | 57625223 | 57624969 | ID=Msa0079680-mRNA-1:exon:18287;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57626071 | 57626256 | 57626071 | ID=Msa0079680-mRNA-1:exon:18288;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57626604 | 57626693 | 57626604 | ID=Msa0079680-mRNA-1:exon:18289;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57629087 | 57629160 | 57629087 | ID=Msa0079680-mRNA-1:exon:18290;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57630033 | 57630182 | 57630033 | ID=Msa0079680-mRNA-1:exon:18291;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57630418 | 57630538 | 57630418 | ID=Msa0079680-mRNA-1:exon:18292;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57630728 | 57630783 | 57630728 | ID=Msa0079680-mRNA-1:exon:18293;Parent=Msa0079680-mRNA-1 |
| chr1_2 | exon | 57632208 | 57632256 | 57632208 | ID=Msa0079680-mRNA-1:exon:18294;Parent=Msa0079680-mRNA-1 |
| chr1_2 | five_prime_UTR | 57624969 | 57625118 | 57624969 | ID=Msa0079680-mRNA-1:five_prime_utr;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57625119 | 57625223 | 57625119 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57626071 | 57626256 | 57626071 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57626604 | 57626693 | 57626604 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57629087 | 57629160 | 57629087 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57630033 | 57630182 | 57630033 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57630418 | 57630538 | 57630418 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57630728 | 57630783 | 57630728 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| chr1_2 | CDS | 57632208 | 57632256 | 57632208 | ID=Msa0079680-mRNA-1:cds;Parent=Msa0079680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
