Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707000 | XP_013447274.1 | 96.384 | 636 | 5 | 1 | 1 | 636 | 1 | 618 | 0.0 | 1234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707000 | A0A072TVW4 | 96.384 | 636 | 5 | 1 | 1 | 636 | 1 | 618 | 0.0 | 1234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044240 | Msa0707000 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0079680 | Msa0707000 | 0.800702 | 1.273064e-48 | -8.615850e-47 |
| Msa0090770 | Msa0707000 | 0.839035 | 2.015585e-57 | -8.615850e-47 |
| Msa0707000 | Msa1040110 | 0.848335 | 6.544939e-60 | -8.615850e-47 |
| Msa0707000 | Msa1083420 | 0.832884 | 7.326825e-56 | -8.615850e-47 |
| Msa0707000 | Msa1123290 | 0.809352 | 1.974078e-50 | -8.615850e-47 |
| Msa0707000 | Msa1123310 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
| Msa0707000 | Msa1128170 | 0.820790 | 5.693245e-53 | -8.615850e-47 |
| Msa0707000 | Msa1279490 | 0.806677 | 7.323462e-50 | -8.615850e-47 |
| Msa0707000 | Msa1296250 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0707000 | Msa1300950 | 0.839190 | 1.837619e-57 | -8.615850e-47 |
| Msa0707000 | Msa1381100 | 0.814961 | 1.180181e-51 | -8.615850e-47 |
| Msa0707000 | Msa1442160 | 0.847013 | 1.512955e-59 | -8.615850e-47 |
| Msa0707000 | Msa1453780 | 0.831053 | 2.076111e-55 | -8.615850e-47 |
| Msa0183640 | Msa0707000 | 0.852814 | 3.606975e-61 | -8.615850e-47 |
| Msa0216580 | Msa0707000 | 0.839821 | 1.259778e-57 | -8.615850e-47 |
| Msa0247970 | Msa0707000 | 0.853648 | 2.080246e-61 | -8.615850e-47 |
| Msa0310900 | Msa0707000 | 0.837373 | 5.402200e-57 | -8.615850e-47 |
| Msa0328420 | Msa0707000 | 0.811641 | 6.325772e-51 | -8.615850e-47 |
| Msa0539010 | Msa0707000 | 0.853414 | 2.427267e-61 | -8.615850e-47 |
| Msa0573100 | Msa0707000 | 0.917883 | 3.081213e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707000 | MtrunA17_Chr8g0388901 | 96.384 | 636 | 5 | 1 | 1 | 636 | 1 | 618 | 0.0 | 1234 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707000 | AT2G07360.1 | 73.201 | 653 | 132 | 8 | 1 | 636 | 1 | 627 | 0.0 | 937 |
| Msa0707000 | AT2G07360.2 | 73.130 | 655 | 131 | 9 | 1 | 636 | 1 | 629 | 0.0 | 934 |
Find 162 sgRNAs with CRISPR-Local
Find 606 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGGGATACCCACCCCTAAT+TGG | 0.209371 | 4_4:-80223160 | Msa0707000:CDS |
| AGGACTGAGGAGCGTGCTTC+TGG | 0.219446 | 4_4:-80217196 | Msa0707000:CDS |
| AGATTGTACGAAATTGTATT+TGG | 0.253370 | 4_4:-80222210 | Msa0707000:CDS |
| CGGTGAAAATGGACTATTTC+CGG | 0.260010 | 4_4:+80224394 | None:intergenic |
| TCAGCCAGAGCATCCCAATT+AGG | 0.280359 | 4_4:+80223146 | None:intergenic |
| GGGTATGTTGGCTTCATTAA+TGG | 0.294750 | 4_4:-80216111 | Msa0707000:CDS |
| CGATTTATGCAGGACTCTTC+CGG | 0.309176 | 4_4:-80224197 | Msa0707000:intron |
| GAATTATAAACTGCAAGTTT+TGG | 0.314073 | 4_4:+80223552 | None:intergenic |
| CAGCCAGAGCATCCCAATTA+GGG | 0.324396 | 4_4:+80223147 | None:intergenic |
| TGTAGAAATGCTGGATTTCC+AGG | 0.327121 | 4_4:+80219867 | None:intergenic |
| CGCCGATCCAACTCCGTTGC+CGG | 0.344088 | 4_4:-80224150 | Msa0707000:CDS |
| CAGATCCATTAGCGTGGTTC+CGG | 0.346035 | 4_4:+80224178 | None:intergenic |
| TAATTCTGTGGATCCTTCAT+TGG | 0.349201 | 4_4:-80223535 | Msa0707000:CDS |
| ATGGTTTATTGAACAACCTT+GGG | 0.355184 | 4_4:+80215850 | None:intergenic |
| AGTTCATCAAATGAGTCAAT+TGG | 0.366179 | 4_4:+80216008 | None:intergenic |
| CAGGATTTCATCTGCTGATC+CGG | 0.374152 | 4_4:-80218302 | Msa0707000:CDS |
| ATCTAAACAGAGTTGACTTC+AGG | 0.379978 | 4_4:-80218321 | Msa0707000:CDS |
| GCGATATGTCTATTACTATC+TGG | 0.380471 | 4_4:-80223228 | Msa0707000:CDS |
| AAGGCCATCGCAACAGCATA+AGG | 0.383055 | 4_4:+80218229 | None:intergenic |
| AAGTCAACTCTGTTTAGATC+TGG | 0.383849 | 4_4:+80218325 | None:intergenic |
| TTCAATAAACCATTACTTGA+AGG | 0.384763 | 4_4:-80215840 | Msa0707000:CDS |
| AACAACCTTGGGGTGCTTAA+CGG | 0.386087 | 4_4:+80215861 | None:intergenic |
| ACATTCTACATCAGCATTTG+TGG | 0.389142 | 4_4:+80223052 | None:intergenic |
| TATGCTGTTGCGATGGCCTT+AGG | 0.391470 | 4_4:-80218226 | Msa0707000:intron |
| TTGAACTGGGATCTAATATC+TGG | 0.394420 | 4_4:+80217451 | None:intergenic |
| CTCTTCCGGAACCACGCTAA+TGG | 0.395108 | 4_4:-80224183 | Msa0707000:CDS |
| GATAGAGCACTGTATTGAAC+TGG | 0.395803 | 4_4:+80217437 | None:intergenic |
| CGGGATACCCACCCCTAATT+GGG | 0.402516 | 4_4:-80223159 | Msa0707000:CDS |
| ACCAGTGTCAGATAAAATTC+TGG | 0.406331 | 4_4:+80223205 | None:intergenic |
| ATTGGCTCCTTCTCTTCTCA+TGG | 0.408815 | 4_4:-80223517 | Msa0707000:intron |
| GGACTGAGGAGCGTGCTTCT+GGG | 0.411679 | 4_4:-80217195 | Msa0707000:CDS |
| TGCTTTCGCTGTGGGCATAC+AGG | 0.414514 | 4_4:-80216834 | Msa0707000:CDS |
| AAGCGAAAGAAAGGCATACT+TGG | 0.415420 | 4_4:-80221476 | Msa0707000:CDS |
| CTCAAAACAGACTCTTTCAC+TGG | 0.420259 | 4_4:+80217399 | None:intergenic |
| CACCCCTAATTGGGATGCTC+TGG | 0.420630 | 4_4:-80223150 | Msa0707000:CDS |
| CTTTCCTTCGATGATGCATC+TGG | 0.422614 | 4_4:+80217139 | None:intergenic |
| TCGGAGACTGCAATCCTTGA+AGG | 0.429909 | 4_4:-80222274 | Msa0707000:CDS |
| GGTTCCCAAGGTTTGAGCTC+TGG | 0.431409 | 4_4:-80223185 | Msa0707000:CDS |
| AGTGTGGCCAACGGTGAAAA+TGG | 0.431733 | 4_4:+80224383 | None:intergenic |
| ATAGTTCAGTTACCTTAAAA+CGG | 0.433915 | 4_4:+80215904 | None:intergenic |
| TGCAGCAGCTAGAGTTGTAC+AGG | 0.434117 | 4_4:-80216879 | Msa0707000:CDS |
| CGCCACCAGAGCTCAAACCT+TGG | 0.434158 | 4_4:+80223180 | None:intergenic |
| GCAAGTTGTGAATACGAAAC+TGG | 0.436238 | 4_4:+80223750 | None:intergenic |
| AAATACAATTTCGTACAATC+TGG | 0.444054 | 4_4:+80222212 | None:intergenic |
| AATGGTTTATTGAACAACCT+TGG | 0.446261 | 4_4:+80215849 | None:intergenic |
| CTGGGTGGTACCGTTTGACC+AGG | 0.446745 | 4_4:-80217177 | Msa0707000:CDS |
| TCGAGAGCTAGATCTTTAGA+TGG | 0.447647 | 4_4:-80217569 | Msa0707000:intron |
| ATAAAATAACATTACTTTCA+GGG | 0.447690 | 4_4:+80216738 | None:intergenic |
| TGGTGATCAAGGCATTAATC+TGG | 0.451951 | 4_4:-80216040 | Msa0707000:CDS |
| CGGGCCGCTGCTTTCGCTGT+GGG | 0.456700 | 4_4:-80216842 | Msa0707000:CDS |
| TAGTTCAGTTACCTTAAAAC+GGG | 0.459095 | 4_4:+80215905 | None:intergenic |
| AGAGCATTCCTCACAGCAAC+CGG | 0.460875 | 4_4:+80218283 | None:intergenic |
| TAGCAAGAACATCGTGCAAA+TGG | 0.462573 | 4_4:+80217624 | None:intergenic |
| GTTCATCAAATGAGTCAATT+GGG | 0.463005 | 4_4:+80216009 | None:intergenic |
| GCTGGTAGAGATACCATTGC+GGG | 0.465161 | 4_4:-80216131 | Msa0707000:CDS |
| AAAAGAGCTGCTGACCAAGC+TGG | 0.469461 | 4_4:+80215954 | None:intergenic |
| AGAAGACTCCCTCTAGATCC+TGG | 0.469587 | 4_4:-80219885 | Msa0707000:CDS |
| AGCTAGAGTTGTACAGGAGA+TGG | 0.472011 | 4_4:-80216873 | Msa0707000:CDS |
| ACATCTCAATCTTCAACGTT+AGG | 0.476740 | 4_4:-80224077 | Msa0707000:CDS |
| CTAAGCTGTTTAATTATTCG+CGG | 0.477562 | 4_4:+80223083 | None:intergenic |
| ATCTCTACCAGCAGTTCCAT+TGG | 0.478504 | 4_4:+80216142 | None:intergenic |
| TAGCATATTGTAGATTGCTT+CGG | 0.481952 | 4_4:+80219922 | None:intergenic |
| TTTCTACATTATGCGGTACT+CGG | 0.484089 | 4_4:-80219852 | Msa0707000:CDS |
| ACCGCATAATGTAGAAATGC+TGG | 0.491048 | 4_4:+80219858 | None:intergenic |
| ACTAGCTGCTACTTCTGATC+AGG | 0.494331 | 4_4:-80223712 | Msa0707000:intron |
| AGCATATGTAAGCGCCTTCA+AGG | 0.496924 | 4_4:+80222260 | None:intergenic |
| GTTGGCTTCATTAATGGAAG+TGG | 0.497905 | 4_4:-80216105 | Msa0707000:CDS |
| GCCACCAGAGCTCAAACCTT+GGG | 0.498236 | 4_4:+80223181 | None:intergenic |
| CCTTCGCAAAAGCGAAAGAA+AGG | 0.499168 | 4_4:-80221485 | Msa0707000:CDS |
| CAAGGTTTGAGCTCTGGTGG+CGG | 0.499594 | 4_4:-80223179 | Msa0707000:CDS |
| GATGACGCCGGCAACGGAGT+TGG | 0.502111 | 4_4:+80224143 | None:intergenic |
| TCAGTATCCAATGGAACTGC+TGG | 0.502280 | 4_4:-80216149 | Msa0707000:CDS |
| ATAAAGCACAGAAGATAAAA+CGG | 0.505289 | 4_4:-80217108 | Msa0707000:CDS |
| GCCTCAAAAGCAGAAGAAGA+AGG | 0.506543 | 4_4:-80223955 | Msa0707000:intron |
| CGCCGGCAACGGAGTTGGAT+CGG | 0.508476 | 4_4:+80224148 | None:intergenic |
| AGCAGCTTTAGCAGCGGAGA+TGG | 0.509758 | 4_4:+80223995 | None:intergenic |
| TGTATTTGGCATACTAGAGA+AGG | 0.511143 | 4_4:-80222196 | Msa0707000:intron |
| TCCACCACTCCTTCAAGTAA+TGG | 0.511321 | 4_4:+80215831 | None:intergenic |
| TTATAAAACTTGTAATGAGA+AGG | 0.511355 | 4_4:-80217075 | Msa0707000:intron |
| AGCGAAAGAAAGGCATACTT+GGG | 0.513636 | 4_4:-80221475 | Msa0707000:CDS |
| ACAAAACAGCAAAGAATCAA+TGG | 0.514838 | 4_4:-80224287 | Msa0707000:exon |
| TTCTACATTATGCGGTACTC+GGG | 0.517710 | 4_4:-80219851 | Msa0707000:intron |
| AAGGTTTGAGCTCTGGTGGC+GGG | 0.518866 | 4_4:-80223178 | Msa0707000:CDS |
| TGGATACTGAGGAAGTTCTT+CGG | 0.520951 | 4_4:+80216162 | None:intergenic |
| GCAGGAAAGCAAGTGCAGCC+TGG | 0.520990 | 4_4:-80218073 | Msa0707000:intron |
| TCGGGCCGCTGCTTTCGCTG+TGG | 0.528030 | 4_4:-80216843 | Msa0707000:CDS |
| CTGGCTGACATCGATGCAGT+TGG | 0.529802 | 4_4:-80223131 | Msa0707000:CDS |
| TGAGAATCTCCCTGGTCAAA+CGG | 0.529964 | 4_4:+80217167 | None:intergenic |
| TGTACGAGCGATGGTGATCA+AGG | 0.530253 | 4_4:-80216051 | Msa0707000:CDS |
| GTTGAAGATTGAGATGTTGA+CGG | 0.532217 | 4_4:+80224083 | None:intergenic |
| TCCCAAGGTTTGAGCTCTGG+TGG | 0.534781 | 4_4:-80223182 | Msa0707000:CDS |
| AGTGCTCTATCAACTTCTGT+TGG | 0.534992 | 4_4:-80217425 | Msa0707000:CDS |
| GACGGCGTTGCTGACGGAGT+TGG | 0.535035 | 4_4:+80224101 | None:intergenic |
| AGTCAACTCTGTTTAGATCT+GGG | 0.535804 | 4_4:+80218326 | None:intergenic |
| GGCTGCAGATTTGAATGACT+CGG | 0.536006 | 4_4:-80216774 | Msa0707000:CDS |
| AACGTTAGGTAAACCTGCTA+CGG | 0.536527 | 4_4:-80224063 | Msa0707000:CDS |
| GGTTGCTGTGAGGAATGCTC+TGG | 0.538477 | 4_4:-80218281 | Msa0707000:CDS |
| GATATGTAAGAAAACAATGC+CGG | 0.540116 | 4_4:-80224413 | Msa0707000:five_prime_UTR |
| AGATACCATTGCGGGTATGT+TGG | 0.542528 | 4_4:-80216123 | Msa0707000:CDS |
| AGGCCATCGCAACAGCATAA+GGG | 0.543844 | 4_4:+80218230 | None:intergenic |
| GCTAGAGTTGTACAGGAGAT+GGG | 0.549363 | 4_4:-80216872 | Msa0707000:CDS |
| ACTTGCAGTTTATAATTCTG+TGG | 0.550701 | 4_4:-80223547 | Msa0707000:CDS |
| TTATCTGACACTGGTTCCCA+AGG | 0.551286 | 4_4:-80223197 | Msa0707000:CDS |
| GAGCATACCATGAGAAGAGA+AGG | 0.552347 | 4_4:+80223510 | None:intergenic |
| TCGTACATAAACACATTCAC+AGG | 0.553572 | 4_4:+80216067 | None:intergenic |
| CAGAACTCTCTGATCCAGCT+TGG | 0.554901 | 4_4:-80215968 | Msa0707000:CDS |
| GCTGACATCGATGCAGTTGG+AGG | 0.556989 | 4_4:-80223128 | Msa0707000:CDS |
| TCTAGCTGCTGCATGAAGCA+CGG | 0.562243 | 4_4:+80216889 | None:intergenic |
| CTAGCTGCTGCATGAAGCAC+GGG | 0.562753 | 4_4:+80216890 | None:intergenic |
| TTTCTTCGTCACCGTGAGTG+TGG | 0.564515 | 4_4:+80224367 | None:intergenic |
| TTGCTAGAGTTTCTCTAGCG+AGG | 0.568429 | 4_4:-80217607 | Msa0707000:CDS |
| CTTCATTAATGGAAGTGGTA+CGG | 0.569012 | 4_4:-80216100 | Msa0707000:CDS |
| TTCACCGTTGGCCACACTCA+CGG | 0.569690 | 4_4:-80224378 | Msa0707000:five_prime_UTR |
| AAAACATCAGAGTCTGTTGA+AGG | 0.572521 | 4_4:+80222237 | None:intergenic |
| AGAAGAGAAGGAGCCAATGA+AGG | 0.579848 | 4_4:+80223522 | None:intergenic |
| GATGAAGATGACGCCGGCAA+CGG | 0.582642 | 4_4:+80224137 | None:intergenic |
| ACCATTACTTGAAGGAGTGG+TGG | 0.584583 | 4_4:-80215832 | Msa0707000:CDS |
| GCTGGATTTCCAGGATCTAG+AGG | 0.585066 | 4_4:+80219876 | None:intergenic |
| TGGTAACTTGAGAATCTCCC+TGG | 0.587150 | 4_4:+80217159 | None:intergenic |
| TCCAGCATTTCTACATTATG+CGG | 0.591784 | 4_4:-80219859 | Msa0707000:CDS |
| GCACGGGTCTAGAAAAGCTA+CGG | 0.593575 | 4_4:+80216906 | None:intergenic |
| CAGAGCATCCCAATTAGGGG+TGG | 0.597872 | 4_4:+80223151 | None:intergenic |
| TGTTTCTGAGATAGCAGCAA+GGG | 0.599840 | 4_4:-80218254 | Msa0707000:CDS |
| TAAACCATTACTTGAAGGAG+TGG | 0.600846 | 4_4:-80215835 | Msa0707000:CDS |
| TTGTTTACATTTCAGGACTG+AGG | 0.604534 | 4_4:-80217209 | Msa0707000:intron |
| GGACCCTTATGCTGTTGCGA+TGG | 0.610776 | 4_4:-80218233 | Msa0707000:CDS |
| AAGGCATTAATCTGGATGCA+AGG | 0.614905 | 4_4:-80216032 | Msa0707000:CDS |
| GTTACCAGATGCATCATCGA+AGG | 0.615618 | 4_4:-80217143 | Msa0707000:CDS |
| CTGGATTTCCAGGATCTAGA+GGG | 0.617840 | 4_4:+80219877 | None:intergenic |
| TGAAGCCAACATACCCGCAA+TGG | 0.618517 | 4_4:+80216118 | None:intergenic |
| AGAACTTCCTCAGTATCCAA+TGG | 0.618546 | 4_4:-80216158 | Msa0707000:CDS |
| GATGTTGACGGCGTTGCTGA+CGG | 0.621236 | 4_4:+80224095 | None:intergenic |
| GTCACCGTGAGTGTGGCCAA+CGG | 0.621611 | 4_4:+80224374 | None:intergenic |
| GGCATACAGGATGTTGATGA+AGG | 0.622927 | 4_4:-80216821 | Msa0707000:CDS |
| AGAGCATCCCAATTAGGGGT+GGG | 0.631815 | 4_4:+80223152 | None:intergenic |
| TCAAAACAGACTCTTTCACT+GGG | 0.636018 | 4_4:+80217400 | None:intergenic |
| CTGCTGATCCGGTTGCTGTG+AGG | 0.637181 | 4_4:-80218291 | Msa0707000:CDS |
| AGCAGTTCCATTGGATACTG+AGG | 0.639227 | 4_4:+80216151 | None:intergenic |
| TGCTGACGGAGTTGGAGCAG+CGG | 0.640315 | 4_4:+80224109 | None:intergenic |
| TATGCCCACAGCGAAAGCAG+CGG | 0.644277 | 4_4:+80216838 | None:intergenic |
| ATAGAGCACTGTATTGAACT+GGG | 0.645493 | 4_4:+80217438 | None:intergenic |
| GTAGCTTAATCAGCAGTGTG+AGG | 0.650929 | 4_4:-80223264 | Msa0707000:intron |
| TGGTTTATTGAACAACCTTG+GGG | 0.652902 | 4_4:+80215851 | None:intergenic |
| GAGTCTTCTCAAAGCACTCA+AGG | 0.654594 | 4_4:+80219899 | None:intergenic |
| TGGGTGGTACCGTTTGACCA+GGG | 0.663267 | 4_4:-80217176 | Msa0707000:CDS |
| CTGAGGAGCGTGCTTCTGGG+TGG | 0.664102 | 4_4:-80217192 | Msa0707000:CDS |
| TCGAACAGCAGCTTTAGCAG+CGG | 0.667433 | 4_4:+80223989 | None:intergenic |
| ACATGTCAATACATTTGCTG+AGG | 0.669031 | 4_4:-80216795 | Msa0707000:CDS |
| GCGAAAGAAAGGCATACTTG+GGG | 0.679284 | 4_4:-80221474 | Msa0707000:CDS |
| CGAAAGAAAGGCATACTTGG+GGG | 0.681525 | 4_4:-80221473 | Msa0707000:CDS |
| GTCGAAGATGAAGATGACGC+CGG | 0.687968 | 4_4:+80224131 | None:intergenic |
| AGCCAGAGCATCCCAATTAG+GGG | 0.688173 | 4_4:+80223148 | None:intergenic |
| GGTTTCAGAGAAGTTCTCAG+AGG | 0.691084 | 4_4:-80223596 | Msa0707000:intron |
| TTGTTTCTGAGATAGCAGCA+AGG | 0.692944 | 4_4:-80218255 | Msa0707000:CDS |
| GGAAAGCAAGTGCAGCCTGG+AGG | 0.695657 | 4_4:-80218070 | Msa0707000:intron |
| GAAAATATGATAGCGCCGAG+AGG | 0.695917 | 4_4:-80217357 | Msa0707000:intron |
| GGTTATCAGATCCATTAGCG+TGG | 0.700850 | 4_4:+80224172 | None:intergenic |
| CGGCAACGGAGTTGGATCGG+CGG | 0.702752 | 4_4:+80224151 | None:intergenic |
| TGCTGGTAGAGATACCATTG+CGG | 0.709001 | 4_4:-80216132 | Msa0707000:CDS |
| TATCACCGTTAAGCACCCCA+AGG | 0.711724 | 4_4:-80215866 | Msa0707000:CDS |
| ATGTGTTTATGTACGAGCGA+TGG | 0.721947 | 4_4:-80216060 | Msa0707000:CDS |
| AAACAGCAAAGAATCAATGG+CGG | 0.748870 | 4_4:-80224284 | Msa0707000:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTTTTTTTTTTTTAAC+GGG | - | chr4_4:80216645-80216664 | Msa0707000:intron | 10.0% |
| !!! | TTTATTGTTCTTATTTTTTT+TGG | - | chr4_4:80217791-80217810 | Msa0707000:intron | 10.0% |
| !!! | TATTTTAGTAATTTATTAAC+GGG | - | chr4_4:80219509-80219528 | Msa0707000:intron | 10.0% |
| !!! | AGAGTTTTTTTTTTTTTTAA+CGG | + | chr4_4:80220971-80220990 | None:intergenic | 10.0% |
| !!! | ATGTTATTTTATTTGTTTAA+TGG | - | chr4_4:80223542-80223561 | Msa0707000:CDS | 10.0% |
| !!! | TTGTATTTTTACTGTTTAAT+TGG | - | chr4_4:80216875-80216894 | Msa0707000:CDS | 15.0% |
| !!! | AAATGTAGTTTTATGTTTAA+AGG | - | chr4_4:80217494-80217513 | Msa0707000:intron | 15.0% |
| !!! | AATGTAGTTTTATGTTTAAA+GGG | - | chr4_4:80217495-80217514 | Msa0707000:intron | 15.0% |
| !! | ATTATATCAATGATTCAATA+TGG | + | chr4_4:80217936-80217955 | None:intergenic | 15.0% |
| !! | ACATATTTATTTAAACTTCT+AGG | - | chr4_4:80218914-80218933 | Msa0707000:intron | 15.0% |
| !!! | TGATGAAATATTAATTTTCT+CGG | - | chr4_4:80218998-80219017 | Msa0707000:intron | 15.0% |
| !! | AATTTGAATAAGATTATGTA+TGG | + | chr4_4:80219380-80219399 | None:intergenic | 15.0% |
| !! | ACATGAAATTAAAAATACAA+AGG | + | chr4_4:80220195-80220214 | None:intergenic | 15.0% |
| !! | AGCAAATTAAAAACATAAAT+AGG | + | chr4_4:80220309-80220328 | None:intergenic | 15.0% |
| !!! | TTGAAAATTTTGTTTTTTGT+TGG | + | chr4_4:80220761-80220780 | None:intergenic | 15.0% |
| !!! | CATCTAAAATATTGTATTTA+TGG | - | chr4_4:80220787-80220806 | Msa0707000:intron | 15.0% |
| !! | TTTGAGAAATTTAACTAATT+GGG | + | chr4_4:80221349-80221368 | None:intergenic | 15.0% |
| !! | ATCTTAAATCTAATACTTAA+AGG | - | chr4_4:80222163-80222182 | Msa0707000:intron | 15.0% |
| !! | TCTTAAATCTAATACTTAAA+GGG | - | chr4_4:80222164-80222183 | Msa0707000:intron | 15.0% |
| !!! | AAACAAATGTTTTGATTTTA+TGG | + | chr4_4:80222469-80222488 | None:intergenic | 15.0% |
| !!! | AATTTTCATTAAACAAAACA+GGG | + | chr4_4:80222741-80222760 | None:intergenic | 15.0% |
| !! | ATAAAATAACATTACTTTCA+GGG | + | chr4_4:80223534-80223553 | None:intergenic | 15.0% |
| !! | AATAAAATAACATTACTTTC+AGG | + | chr4_4:80223535-80223554 | None:intergenic | 15.0% |
| !! | TTACATAATGATAAATAAAC+AGG | - | chr4_4:80224022-80224041 | Msa0707000:CDS | 15.0% |
| !!! | AGTTTTTAGTTTAATACCAT+TGG | - | chr4_4:80216418-80216437 | Msa0707000:intron | 20.0% |
| !!! | TTTTTTTTTTAACGGGAAAA+TGG | - | chr4_4:80216652-80216671 | Msa0707000:intron | 20.0% |
| !!! | GATAAAATTTTTTAAAACCC+TGG | - | chr4_4:80216806-80216825 | Msa0707000:CDS | 20.0% |
| !!! | TTACAGTTTTAAACCTTTAA+TGG | - | chr4_4:80217263-80217282 | Msa0707000:intron | 20.0% |
| !! | AACAAACAAAATGAAGAAAT+TGG | - | chr4_4:80217535-80217554 | Msa0707000:intron | 20.0% |
| !!! | TATATTTGGAATTAGTTGTT+TGG | - | chr4_4:80218176-80218195 | Msa0707000:intron | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr4_4:80218394-80218413 | Msa0707000:intron | 20.0% |
| !! | GTATTAATTAGAGCTATAAT+TGG | - | chr4_4:80218430-80218449 | Msa0707000:intron | 20.0% |
| !!! | GGACAATATTTTTTTACAAA+AGG | - | chr4_4:80218503-80218522 | Msa0707000:intron | 20.0% |
| !!! | AATTTTGCTTTTCAATTTTC+AGG | - | chr4_4:80218753-80218772 | Msa0707000:intron | 20.0% |
| !!! | GATGAAATATTAATTTTCTC+GGG | - | chr4_4:80218999-80219018 | Msa0707000:intron | 20.0% |
| !!! | ATGAAATATTAATTTTCTCG+GGG | - | chr4_4:80219000-80219019 | Msa0707000:intron | 20.0% |
| !! | AACATCAATATTAACGTATT+TGG | + | chr4_4:80219074-80219093 | None:intergenic | 20.0% |
| !! | AAAAAAAATCCAATAATCCA+TGG | + | chr4_4:80219309-80219328 | None:intergenic | 20.0% |
| !!! | TATGGATTATGAAATTTGTA+TGG | + | chr4_4:80219362-80219381 | None:intergenic | 20.0% |
| !! | AATTGAATGTAAGAACATTA+GGG | + | chr4_4:80219690-80219709 | None:intergenic | 20.0% |
| !! | TAATTGAATGTAAGAACATT+AGG | + | chr4_4:80219691-80219710 | None:intergenic | 20.0% |
| !!! | TGTTTAACTTCAAGAATTTT+TGG | + | chr4_4:80219885-80219904 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTAACGGC+AGG | + | chr4_4:80220967-80220986 | None:intergenic | 20.0% |
| !! | TAATAGTTACTCAATTCTAA+TGG | - | chr4_4:80221131-80221150 | Msa0707000:intron | 20.0% |
| !! | ATTAAACAAATAGAAGATAC+TGG | - | chr4_4:80221189-80221208 | Msa0707000:intron | 20.0% |
| !!! | CTTTGAGAAATTTAACTAAT+TGG | + | chr4_4:80221350-80221369 | None:intergenic | 20.0% |
| !!! | TGAATTTAAGTTCATTTTCT+AGG | - | chr4_4:80221631-80221650 | Msa0707000:intron | 20.0% |
| !!! | TAGGTTGTTTTTGAAAAATT+GGG | - | chr4_4:80221650-80221669 | Msa0707000:intron | 20.0% |
| !! | AAAATTTCTCAAACAAAGAA+AGG | + | chr4_4:80221799-80221818 | None:intergenic | 20.0% |
| !!! | TTCTTGCTTTTCTTTTATTT+TGG | - | chr4_4:80221823-80221842 | Msa0707000:intron | 20.0% |
| !!! | ATAATTATTTTCCCTTGAAA+TGG | - | chr4_4:80222082-80222101 | Msa0707000:intron | 20.0% |
| !!! | AGATTTAAGATAGTAGAATA+TGG | + | chr4_4:80222154-80222173 | None:intergenic | 20.0% |
| !! | TCAGATATTTGAAAAAACAT+AGG | - | chr4_4:80222432-80222451 | Msa0707000:intron | 20.0% |
| !! | AGCTTAATTTCTTACAATTA+AGG | + | chr4_4:80222532-80222551 | None:intergenic | 20.0% |
| !!! | TGTAAGAAATTAAGCTTTAT+TGG | - | chr4_4:80222536-80222555 | Msa0707000:intron | 20.0% |
| !!! | CAATTTTCATTAAACAAAAC+AGG | + | chr4_4:80222742-80222761 | None:intergenic | 20.0% |
| !! | TTTAATGAAAATTGATCCTT+GGG | - | chr4_4:80222748-80222767 | Msa0707000:intron | 20.0% |
| !! | TTATAAAACTTGTAATGAGA+AGG | - | chr4_4:80223194-80223213 | Msa0707000:CDS | 20.0% |
| !! | AGAAATATAAAACCAATCTT+CGG | - | chr4_4:80223699-80223718 | Msa0707000:intron | 20.0% |
| !! | GTAAAAAAGATAGATAACAA+AGG | + | chr4_4:80223889-80223908 | None:intergenic | 20.0% |
| ! | CAATGATGATAAGAAAGAAA+AGG | + | chr4_4:80216352-80216371 | None:intergenic | 25.0% |
| !! | TTTTGCTCATGAAATTTAGA+AGG | - | chr4_4:80216441-80216460 | Msa0707000:intron | 25.0% |
| !! | ACATTAGAAATTTTCCACAT+TGG | + | chr4_4:80216630-80216649 | None:intergenic | 25.0% |
| !! | GAATTATAAACTGCAAGTTT+TGG | + | chr4_4:80216720-80216739 | None:intergenic | 25.0% |
| ! | TATCAAAAGGACATGTTAAA+GGG | + | chr4_4:80216790-80216809 | None:intergenic | 25.0% |
| ! | TTATCAAAAGGACATGTTAA+AGG | + | chr4_4:80216791-80216810 | None:intergenic | 25.0% |
| ! | ACATAAAACTACATTTCTCT+TGG | + | chr4_4:80217490-80217509 | None:intergenic | 25.0% |
| ! | ATCATTGTACAATTGCATAA+TGG | + | chr4_4:80217750-80217769 | None:intergenic | 25.0% |
| ! | AAATACAATTTCGTACAATC+TGG | + | chr4_4:80218060-80218079 | None:intergenic | 25.0% |
| ! | AGATTGTACGAAATTGTATT+TGG | - | chr4_4:80218059-80218078 | Msa0707000:intron | 25.0% |
| ! | CAACTAATTCCAAATATAAG+TGG | + | chr4_4:80218174-80218193 | None:intergenic | 25.0% |
| ! | CAAAGTGGAATATATTGAAT+TGG | - | chr4_4:80218393-80218412 | Msa0707000:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTTTTTT+GGG | - | chr4_4:80218482-80218501 | Msa0707000:intron | 25.0% |
| !! | TTTTGTCAGTATACTTGATT+TGG | - | chr4_4:80218610-80218629 | Msa0707000:intron | 25.0% |
| ! | AGAGAGAATAAAGTTAGAAA+GGG | + | chr4_4:80218651-80218670 | None:intergenic | 25.0% |
| ! | TAGAGAGAATAAAGTTAGAA+AGG | + | chr4_4:80218652-80218671 | None:intergenic | 25.0% |
| ! | GTTTAAAAGTTGAAACTTCT+AGG | + | chr4_4:80219337-80219356 | None:intergenic | 25.0% |
| !! | TGATTAGTTGAAAACTTGTA+TGG | + | chr4_4:80219447-80219466 | None:intergenic | 25.0% |
| !! | TTTAACTATCCGTTACTTTA+TGG | + | chr4_4:80219580-80219599 | None:intergenic | 25.0% |
| !!! | TGATTTTCTTAGTTTTTTCG+TGG | - | chr4_4:80219923-80219942 | Msa0707000:CDS | 25.0% |
| !! | CTGAAAAGAATTTTGCTAAA+AGG | - | chr4_4:80220021-80220040 | Msa0707000:intron | 25.0% |
| !! | AAAAGAATTTTGCTAAAAGG+AGG | - | chr4_4:80220024-80220043 | Msa0707000:intron | 25.0% |
| !!! | TCTAATTTACTTTTTAGAGC+TGG | - | chr4_4:80220118-80220137 | Msa0707000:intron | 25.0% |
| ! | AAAATACAAAGGTCTCTTAT+AGG | + | chr4_4:80220184-80220203 | None:intergenic | 25.0% |
| !!! | TTGCAGATTTTGATAAATCT+CGG | + | chr4_4:80220232-80220251 | None:intergenic | 25.0% |
| ! | AATCTTTACTAATTATTGCC+TGG | - | chr4_4:80220459-80220478 | Msa0707000:intron | 25.0% |
| ! | ATAGACCACTAAATGTTATT+AGG | - | chr4_4:80220733-80220752 | Msa0707000:intron | 25.0% |
| ! | AACTTCAAAGTGAATTTCTA+AGG | + | chr4_4:80220929-80220948 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTCAGATGATATA+TGG | - | chr4_4:80221040-80221059 | Msa0707000:intron | 25.0% |
| ! | AGAATTGAGTAACTATTAGT+TGG | + | chr4_4:80221129-80221148 | None:intergenic | 25.0% |
| ! | AATGGAAGATACAAAATTCT+AGG | - | chr4_4:80221149-80221168 | Msa0707000:intron | 25.0% |
| ! | TTATTATTGGGAAGAAAGAA+GGG | + | chr4_4:80221479-80221498 | None:intergenic | 25.0% |
| ! | TTCTTTCTTCCCAATAATAA+CGG | - | chr4_4:80221479-80221498 | Msa0707000:CDS | 25.0% |
| ! | TTTGACAAACCGTTATTATT+GGG | + | chr4_4:80221491-80221510 | None:intergenic | 25.0% |
| ! | ATTTGACAAACCGTTATTAT+TGG | + | chr4_4:80221492-80221511 | None:intergenic | 25.0% |
| !!! | AATTCATGTATTTTTATCCC+CGG | + | chr4_4:80221617-80221636 | None:intergenic | 25.0% |
| !!! | CTAGGTTGTTTTTGAAAAAT+TGG | - | chr4_4:80221649-80221668 | Msa0707000:intron | 25.0% |
| ! | AGAACAATAATAGAATGTTG+TGG | - | chr4_4:80221674-80221693 | Msa0707000:intron | 25.0% |
| ! | AAACTAAACAGCAAAAACAA+GGG | + | chr4_4:80221892-80221911 | None:intergenic | 25.0% |
| ! | TTCAAGGGAAAATAATTATG+AGG | + | chr4_4:80222081-80222100 | None:intergenic | 25.0% |
| ! | GACATATTCAAACAAACAAA+AGG | + | chr4_4:80222266-80222285 | None:intergenic | 25.0% |
| ! | TTTGAATATGTCTTTGAATG+CGG | - | chr4_4:80222274-80222293 | Msa0707000:CDS | 25.0% |
| !! | TCAAATATCTGAAGTAATGT+GGG | + | chr4_4:80222424-80222443 | None:intergenic | 25.0% |
| !! | TTCAAATATCTGAAGTAATG+TGG | + | chr4_4:80222425-80222444 | None:intergenic | 25.0% |
| !!! | TAATTTTTTGTGTATGTTGC+AGG | - | chr4_4:80222604-80222623 | Msa0707000:intron | 25.0% |
| ! | GTTTAATGAAAATTGATCCT+TGG | - | chr4_4:80222747-80222766 | Msa0707000:intron | 25.0% |
| ! | ATGATATAAATCAAACCTCT+CGG | + | chr4_4:80222930-80222949 | None:intergenic | 25.0% |
| !!! | CAAAGATTTTAAGGTTACAT+AGG | + | chr4_4:80222974-80222993 | None:intergenic | 25.0% |
| ! | GTAACCTTAAAATCTTTGAT+TGG | - | chr4_4:80222976-80222995 | Msa0707000:intron | 25.0% |
| ! | ATAAAGCACAGAAGATAAAA+CGG | - | chr4_4:80223161-80223180 | Msa0707000:CDS | 25.0% |
| !!! | CTCATTACAAGTTTTATAAG+AGG | + | chr4_4:80223193-80223212 | None:intergenic | 25.0% |
| ! | CATAATCATCATCATTGTTA+TGG | - | chr4_4:80223618-80223637 | Msa0707000:intron | 25.0% |
| ! | TGTTATGGATAATTACATGT+TGG | - | chr4_4:80223633-80223652 | Msa0707000:intron | 25.0% |
| ! | ACTGTTATTAAAGTTGAGAA+AGG | - | chr4_4:80223803-80223822 | Msa0707000:intron | 25.0% |
| ! | CTGTTATTAAAGTTGAGAAA+GGG | - | chr4_4:80223804-80223823 | Msa0707000:intron | 25.0% |
| ! | ATTTCTTTCATTCTCTCAAA+GGG | + | chr4_4:80223834-80223853 | None:intergenic | 25.0% |
| ! | AATTTCTTTCATTCTCTCAA+AGG | + | chr4_4:80223835-80223854 | None:intergenic | 25.0% |
| ! | TTTCTTAAAACCAATCTCAT+TGG | - | chr4_4:80223935-80223954 | Msa0707000:intron | 25.0% |
| ! | TTCTTAAAACCAATCTCATT+GGG | - | chr4_4:80223936-80223955 | Msa0707000:intron | 25.0% |
| ! | ATAGTTCAGTTACCTTAAAA+CGG | + | chr4_4:80224368-80224387 | None:intergenic | 25.0% |
| ! | TTCAATAAACCATTACTTGA+AGG | - | chr4_4:80224429-80224448 | Msa0707000:five_prime_UTR | 25.0% |
| GATATGTAAGAAAACAATGC+CGG | - | chr4_4:80215856-80215875 | Msa0707000:CDS | 30.0% | |
| ACAAAACAGCAAAGAATCAA+TGG | - | chr4_4:80215982-80216001 | Msa0707000:CDS | 30.0% | |
| AATTTCATGAGCAAAACCAA+TGG | + | chr4_4:80216437-80216456 | None:intergenic | 30.0% | |
| CAAATTTCTTTGTGAGATTG+TGG | - | chr4_4:80216589-80216608 | Msa0707000:intron | 30.0% | |
| ACTTGCAGTTTATAATTCTG+TGG | - | chr4_4:80216722-80216741 | Msa0707000:intron | 30.0% | |
| TTCTATGAAATGCACAACAT+AGG | - | chr4_4:80216901-80216920 | Msa0707000:CDS | 30.0% | |
| TCTATGAAATGCACAACATA+GGG | - | chr4_4:80216902-80216921 | Msa0707000:CDS | 30.0% | |
| TTACCATTGCTTAGTATGTT+GGG | - | chr4_4:80216955-80216974 | Msa0707000:intron | 30.0% | |
| CTAAGCTGTTTAATTATTCG+CGG | + | chr4_4:80217189-80217208 | None:intergenic | 30.0% | |
| AAATGCTGATGTAGAATGTA+AGG | - | chr4_4:80217221-80217240 | Msa0707000:intron | 30.0% | |
| AATGCTGATGTAGAATGTAA+GGG | - | chr4_4:80217222-80217241 | Msa0707000:intron | 30.0% | |
| ! | TATTCACTTTGTGCCATTAA+AGG | + | chr4_4:80217279-80217298 | None:intergenic | 30.0% |
| ! | AATAGCTCTGTCTAAAATCA+AGG | + | chr4_4:80217329-80217348 | None:intergenic | 30.0% |
| AATCCATGTGAACAAAAGAT+AGG | - | chr4_4:80217378-80217397 | Msa0707000:CDS | 30.0% | |
| !!! | AGTTTTGGATAAGTTGCTTA+TGG | - | chr4_4:80217428-80217447 | Msa0707000:CDS | 30.0% |
| TTATGTTTAAAGGGAATGTC+TGG | - | chr4_4:80217504-80217523 | Msa0707000:intron | 30.0% | |
| GTTATCATGTCCAGTTTAAT+TGG | + | chr4_4:80217578-80217597 | None:intergenic | 30.0% | |
| TCCACAGTTCAAACATAAAA+GGG | + | chr4_4:80217622-80217641 | None:intergenic | 30.0% | |
| ! | TTACAGAGTTCTTTTACTGT+AGG | + | chr4_4:80217684-80217703 | None:intergenic | 30.0% |
| ! | CTTCAAAATACAAGTTGAAC+AGG | + | chr4_4:80217968-80217987 | None:intergenic | 30.0% |
| !!! | TGTATTTTGAAGTTCATGCT+CGG | - | chr4_4:80217976-80217995 | Msa0707000:intron | 30.0% |
| ATTCCAAATATAAGTGGCTA+CGG | + | chr4_4:80218168-80218187 | None:intergenic | 30.0% | |
| TAATGTGTGAAATGAGCAAA+TGG | + | chr4_4:80218289-80218308 | None:intergenic | 30.0% | |
| TAAGTGCTCTTGTCATATAT+TGG | - | chr4_4:80218347-80218366 | Msa0707000:CDS | 30.0% | |
| CCACTTTGCATTTATGATAA+TGG | + | chr4_4:80218381-80218400 | None:intergenic | 30.0% | |
| CCATTATCATAAATGCAAAG+TGG | - | chr4_4:80218378-80218397 | Msa0707000:intron | 30.0% | |
| !!! | GTGAAATGAGTCAGTTTTTT+TGG | - | chr4_4:80218481-80218500 | Msa0707000:intron | 30.0% |
| !! | ACAAATGTTATTTCTGTCAG+AGG | - | chr4_4:80218672-80218691 | Msa0707000:intron | 30.0% |
| ! | TCAACTTTCTTCAGTTTTCT+AGG | - | chr4_4:80218715-80218734 | Msa0707000:intron | 30.0% |
| !!! | TTGCTTTTCAATTTTCAGGT+TGG | - | chr4_4:80218757-80218776 | Msa0707000:intron | 30.0% |
| CAAAGATTCATACAATGTCA+AGG | + | chr4_4:80219037-80219056 | None:intergenic | 30.0% | |
| ATATGTAGGAACTTCTATGT+GGG | + | chr4_4:80219099-80219118 | None:intergenic | 30.0% | |
| AATATGTAGGAACTTCTATG+TGG | + | chr4_4:80219100-80219119 | None:intergenic | 30.0% | |
| ! | TCAAGAATTTGTATGGACTA+AGG | + | chr4_4:80219421-80219440 | None:intergenic | 30.0% |
| ATGGACTTCAAGAATTTGTA+TGG | + | chr4_4:80219428-80219447 | None:intergenic | 30.0% | |
| TGTCTGTATCCATAAAGTAA+CGG | - | chr4_4:80219568-80219587 | Msa0707000:intron | 30.0% | |
| !!! | GATTACTGTTTTTACATGTC+CGG | - | chr4_4:80219723-80219742 | Msa0707000:intron | 30.0% |
| TTTCCCAATGCAATATTCAA+TGG | - | chr4_4:80219974-80219993 | Msa0707000:intron | 30.0% | |
| TTCCCAATGCAATATTCAAT+GGG | - | chr4_4:80219975-80219994 | Msa0707000:intron | 30.0% | |
| AACCCATTGAATATTGCATT+GGG | + | chr4_4:80219980-80219999 | None:intergenic | 30.0% | |
| ! | TCTTTTCAGTTATAGACTTC+AGG | + | chr4_4:80220010-80220029 | None:intergenic | 30.0% |
| TAGCATATTGTAGATTGCTT+CGG | + | chr4_4:80220350-80220369 | None:intergenic | 30.0% | |
| ! | GTACTTTCTTTCCTATTTTG+TGG | - | chr4_4:80220555-80220574 | Msa0707000:intron | 30.0% |
| ! | TTCCTATTTTGTGGTGTATT+TGG | - | chr4_4:80220564-80220583 | Msa0707000:intron | 30.0% |
| CTAAGAATATATGTGTCTGT+GGG | + | chr4_4:80220608-80220627 | None:intergenic | 30.0% | |
| CACAGACACATATATTCTTA+GGG | - | chr4_4:80220607-80220626 | Msa0707000:intron | 30.0% | |
| TTTGTAGTTGTAGATCCTAT+AGG | + | chr4_4:80220682-80220701 | None:intergenic | 30.0% | |
| TATAGGATCTACAACTACAA+AGG | - | chr4_4:80220681-80220700 | Msa0707000:intron | 30.0% | |
| ATGGATGTAATATCAACCTT+AGG | - | chr4_4:80220882-80220901 | Msa0707000:intron | 30.0% | |
| TGGATGTAATATCAACCTTA+GGG | - | chr4_4:80220883-80220902 | Msa0707000:intron | 30.0% | |
| ! | CCAAGGAAAAGTATATTTAG+AGG | + | chr4_4:80221079-80221098 | None:intergenic | 30.0% |
| ! | CCTCTAAATATACTTTTCCT+TGG | - | chr4_4:80221076-80221095 | Msa0707000:intron | 30.0% |
| AGAAGGGAAAACATAACAAA+GGG | + | chr4_4:80221463-80221482 | None:intergenic | 30.0% | |
| AAGAAGGGAAAACATAACAA+AGG | + | chr4_4:80221464-80221483 | None:intergenic | 30.0% | |
| GTTATTATTGGGAAGAAAGA+AGG | + | chr4_4:80221480-80221499 | None:intergenic | 30.0% | |
| !! | TGAAAAATTGTTTTGCCTTC+TGG | - | chr4_4:80221511-80221530 | Msa0707000:intron | 30.0% |
| CATGTTATTATGGAAATTGC+AGG | - | chr4_4:80221744-80221763 | Msa0707000:intron | 30.0% | |
| GAAACTAAACAGCAAAAACA+AGG | + | chr4_4:80221893-80221912 | None:intergenic | 30.0% | |
| !!! | TAGATCTGGGAACTTTTTTT+TGG | + | chr4_4:80221933-80221952 | None:intergenic | 30.0% |
| GTGATAAATCACCATTTCAA+GGG | + | chr4_4:80222096-80222115 | None:intergenic | 30.0% | |
| TGTGATAAATCACCATTTCA+AGG | + | chr4_4:80222097-80222116 | None:intergenic | 30.0% | |
| CAAACAAACAAAAGGAAAAG+AGG | + | chr4_4:80222258-80222277 | None:intergenic | 30.0% | |
| TTGAATATGTCTTTGAATGC+GGG | - | chr4_4:80222275-80222294 | Msa0707000:CDS | 30.0% | |
| TTCAGTAAAACCAGTAGTTA+AGG | - | chr4_4:80222308-80222327 | Msa0707000:intron | 30.0% | |
| ATACTTCATCAACACAAAAC+TGG | + | chr4_4:80222342-80222361 | None:intergenic | 30.0% | |
| AGACAGATCTTGAGTTATAT+AGG | + | chr4_4:80222374-80222393 | None:intergenic | 30.0% | |
| AGTTAGAGCAAAAAAAACTC+AGG | + | chr4_4:80222504-80222523 | None:intergenic | 30.0% | |
| ! | CTAGCCAATCAAAGATTTTA+AGG | + | chr4_4:80222983-80223002 | None:intergenic | 30.0% |
| ! | CTTAAAATCTTTGATTGGCT+AGG | - | chr4_4:80222981-80223000 | Msa0707000:intron | 30.0% |
| ! | CATTTTTACCGTCTTTTCAT+TGG | - | chr4_4:80223019-80223038 | Msa0707000:intron | 30.0% |
| ! | TCCTATCTTGTTTACATTTC+AGG | - | chr4_4:80223053-80223072 | Msa0707000:intron | 30.0% |
| TCCTGAAATGTAAACAAGAT+AGG | + | chr4_4:80223057-80223076 | None:intergenic | 30.0% | |
| !! | ACAAGTTTTATAAGAGGTTG+TGG | + | chr4_4:80223187-80223206 | None:intergenic | 30.0% |
| ! | TTTGATGACTTGAGAATTCA+AGG | + | chr4_4:80223269-80223288 | None:intergenic | 30.0% |
| TTGTTTAATGGTTCATGCTT+AGG | - | chr4_4:80223554-80223573 | Msa0707000:CDS | 30.0% | |
| !! | TAATTACATGTTGGTTCAGA+TGG | - | chr4_4:80223642-80223661 | Msa0707000:intron | 30.0% |
| AAGAATTGATACCTTGATGT+AGG | - | chr4_4:80224081-80224100 | Msa0707000:CDS | 30.0% | |
| GTTCATCAAATGAGTCAATT+GGG | + | chr4_4:80224263-80224282 | None:intergenic | 30.0% | |
| AGTTCATCAAATGAGTCAAT+TGG | + | chr4_4:80224264-80224283 | None:intergenic | 30.0% | |
| TAGTTCAGTTACCTTAAAAC+GGG | + | chr4_4:80224367-80224386 | None:intergenic | 30.0% | |
| ATGGTTTATTGAACAACCTT+GGG | + | chr4_4:80224422-80224441 | None:intergenic | 30.0% | |
| AATGGTTTATTGAACAACCT+TGG | + | chr4_4:80224423-80224442 | None:intergenic | 30.0% | |
| ! | AAATAGTCCATTTTCACCGT+TGG | - | chr4_4:80215879-80215898 | Msa0707000:CDS | 35.0% |
| TGACGAAGAAACAAAAACAG+AGG | - | chr4_4:80215914-80215933 | Msa0707000:CDS | 35.0% | |
| ! | TGAAATTGTGATCGCGTTTT+CGG | + | chr4_4:80215956-80215975 | None:intergenic | 35.0% |
| AAACAGCAAAGAATCAATGG+CGG | - | chr4_4:80215985-80216004 | Msa0707000:CDS | 35.0% | |
| TAAAGTGTGAGAAAGTGAGA+GGG | + | chr4_4:80216015-80216034 | None:intergenic | 35.0% | |
| GTTGAAGATTGAGATGTTGA+CGG | + | chr4_4:80216189-80216208 | None:intergenic | 35.0% | |
| ACATCTCAATCTTCAACGTT+AGG | - | chr4_4:80216192-80216211 | Msa0707000:intron | 35.0% | |
| TACTTCTGATCAGGTAATTG+AGG | - | chr4_4:80216566-80216585 | Msa0707000:intron | 35.0% | |
| TTTGTGTTTGAACTCCAATG+TGG | - | chr4_4:80216613-80216632 | Msa0707000:intron | 35.0% | |
| TAATTCTGTGGATCCTTCAT+TGG | - | chr4_4:80216734-80216753 | Msa0707000:intron | 35.0% | |
| AAGGACATGTTAAAGGGAAA+TGG | + | chr4_4:80216784-80216803 | None:intergenic | 35.0% | |
| CTATGAAATGCACAACATAG+GGG | - | chr4_4:80216903-80216922 | Msa0707000:CDS | 35.0% | |
| ATTTCACGAGAAAAATGCAG+TGG | + | chr4_4:80216930-80216949 | None:intergenic | 35.0% | |
| CTTACCATTGCTTAGTATGT+TGG | - | chr4_4:80216954-80216973 | Msa0707000:intron | 35.0% | |
| TTTCCCAACATACTAAGCAA+TGG | + | chr4_4:80216961-80216980 | None:intergenic | 35.0% | |
| GCGATATGTCTATTACTATC+TGG | - | chr4_4:80217041-80217060 | Msa0707000:intron | 35.0% | |
| ACCAGTGTCAGATAAAATTC+TGG | + | chr4_4:80217067-80217086 | None:intergenic | 35.0% | |
| ACATTCTACATCAGCATTTG+TGG | + | chr4_4:80217220-80217239 | None:intergenic | 35.0% | |
| ! | TCTCCTATCTTTTGTTCACA+TGG | + | chr4_4:80217384-80217403 | None:intergenic | 35.0% |
| TGAACAAAAGATAGGAGAGA+TGG | - | chr4_4:80217386-80217405 | Msa0707000:CDS | 35.0% | |
| GAACAAAAGATAGGAGAGAT+GGG | - | chr4_4:80217387-80217406 | Msa0707000:CDS | 35.0% | |
| ATGGGAAATTACTAGGTTCA+TGG | - | chr4_4:80217405-80217424 | Msa0707000:CDS | 35.0% | |
| ! | TTACTAGGTTCATGGAGTTT+TGG | - | chr4_4:80217413-80217432 | Msa0707000:CDS | 35.0% |
| TCATGTCCAGTTTAATTGGT+CGG | + | chr4_4:80217574-80217593 | None:intergenic | 35.0% | |
| ACTGGACATGATAACTAAAC+TGG | - | chr4_4:80217583-80217602 | Msa0707000:CDS | 35.0% | |
| ! | ACCCTTTTATGTTTGAACTG+TGG | - | chr4_4:80217618-80217637 | Msa0707000:CDS | 35.0% |
| CTCCACAGTTCAAACATAAA+AGG | + | chr4_4:80217623-80217642 | None:intergenic | 35.0% | |
| TTGATATCGCACCTTTGAAT+GGG | - | chr4_4:80217654-80217673 | Msa0707000:intron | 35.0% | |
| ! | TATTTTTCTCCTTCCTCTCA+TGG | + | chr4_4:80217708-80217727 | None:intergenic | 35.0% |
| !! | TAGTTCTGAGCAAGAAGTAT+TGG | - | chr4_4:80217827-80217846 | Msa0707000:intron | 35.0% |
| AAAACATCAGAGTCTGTTGA+AGG | + | chr4_4:80218035-80218054 | None:intergenic | 35.0% | |
| TGTATTTGGCATACTAGAGA+AGG | - | chr4_4:80218073-80218092 | Msa0707000:intron | 35.0% | |
| TTCCAAATATAAGTGGCTAC+GGG | + | chr4_4:80218167-80218186 | None:intergenic | 35.0% | |
| GAATAAAACTCCAAACTCTG+AGG | + | chr4_4:80218235-80218254 | None:intergenic | 35.0% | |
| ATGGCTCACTTAATTTAGGA+CGG | + | chr4_4:80218270-80218289 | None:intergenic | 35.0% | |
| GCAAATGGCTCACTTAATTT+AGG | + | chr4_4:80218274-80218293 | None:intergenic | 35.0% | |
| ! | ACTTAAAGCTACGTGCATTT+TGG | + | chr4_4:80218585-80218604 | None:intergenic | 35.0% |
| !! | AAGGTGCTGATAAAGAAGTA+CGG | - | chr4_4:80218821-80218840 | Msa0707000:intron | 35.0% |
| TTTGGGGGGATTAAATATGT+AGG | + | chr4_4:80219113-80219132 | None:intergenic | 35.0% | |
| TTTAATCCCCCCAAAGAAAA+AGG | - | chr4_4:80219118-80219137 | Msa0707000:intron | 35.0% | |
| ! | TTGCTTCACCTTTTTCTTTG+GGG | + | chr4_4:80219129-80219148 | None:intergenic | 35.0% |
| ! | CTTGCTTCACCTTTTTCTTT+GGG | + | chr4_4:80219130-80219149 | None:intergenic | 35.0% |
| CAAAGAAAAAGGTGAAGCAA+GGG | - | chr4_4:80219129-80219148 | Msa0707000:intron | 35.0% | |
| GGATACAGACATAGATTTGA+TGG | + | chr4_4:80219559-80219578 | None:intergenic | 35.0% | |
| ! | ATTTTATCCGTGGATACCTA+TGG | - | chr4_4:80219635-80219654 | Msa0707000:intron | 35.0% |
| ! | TTTTATCCGTGGATACCTAT+GGG | - | chr4_4:80219636-80219655 | Msa0707000:intron | 35.0% |
| GAATGTAAGAACATTAGGGA+TGG | + | chr4_4:80219686-80219705 | None:intergenic | 35.0% | |
| !!! | CACCTGTTTTATTTAGAGCT+TGG | - | chr4_4:80219836-80219855 | Msa0707000:intron | 35.0% |
| !!! | CTGTTTTATTTAGAGCTTGG+CGG | - | chr4_4:80219839-80219858 | Msa0707000:intron | 35.0% |
| !!! | TGTTTTATTTAGAGCTTGGC+GGG | - | chr4_4:80219840-80219859 | Msa0707000:intron | 35.0% |
| GAACCCATTGAATATTGCAT+TGG | + | chr4_4:80219981-80220000 | None:intergenic | 35.0% | |
| ACATAGAGGCTTCAATATTC+TGG | - | chr4_4:80220049-80220068 | Msa0707000:intron | 35.0% | |
| GCTTCAATATTCTGGATATC+TGG | - | chr4_4:80220057-80220076 | Msa0707000:intron | 35.0% | |
| TATCTGAACCACTATCTCAA+AGG | - | chr4_4:80220094-80220113 | Msa0707000:intron | 35.0% | |
| ATCTGAACCACTATCTCAAA+GGG | - | chr4_4:80220095-80220114 | Msa0707000:intron | 35.0% | |
| !! | AATTAGACCCTTTGAGATAG+TGG | + | chr4_4:80220105-80220124 | None:intergenic | 35.0% |
| !!! | TTAGAGCTGGTGTTCTTTTT+TGG | - | chr4_4:80220131-80220150 | Msa0707000:intron | 35.0% |
| !!! | TAGAGCTGGTGTTCTTTTTT+GGG | - | chr4_4:80220132-80220151 | Msa0707000:intron | 35.0% |
| TCCAGCATTTCTACATTATG+CGG | - | chr4_4:80220410-80220429 | Msa0707000:intron | 35.0% | |
| TTTCTACATTATGCGGTACT+CGG | - | chr4_4:80220417-80220436 | Msa0707000:intron | 35.0% | |
| ATGTTGCAAAGAAAAACTCC+AGG | + | chr4_4:80220480-80220499 | None:intergenic | 35.0% | |
| AGCCAAATACACCACAAAAT+AGG | + | chr4_4:80220569-80220588 | None:intergenic | 35.0% | |
| CCTAAGAATATATGTGTCTG+TGG | + | chr4_4:80220609-80220628 | None:intergenic | 35.0% | |
| CCACAGACACATATATTCTT+AGG | - | chr4_4:80220606-80220625 | Msa0707000:intron | 35.0% | |
| TAGGGAGAAGTTTATCTTTC+AGG | - | chr4_4:80220625-80220644 | Msa0707000:intron | 35.0% | |
| ! | TCAGGCTTTTGTGCATATTT+CGG | - | chr4_4:80220643-80220662 | Msa0707000:intron | 35.0% |
| TGGTGCCTAATAACATTTAG+TGG | + | chr4_4:80220741-80220760 | None:intergenic | 35.0% | |
| TTGGTGAGTAGAGTTACATA+AGG | - | chr4_4:80220841-80220860 | Msa0707000:intron | 35.0% | |
| !!! | TTTTTTTAACGGCAGGATGA+AGG | + | chr4_4:80220960-80220979 | None:intergenic | 35.0% |
| ATCTGAAAAACCAAACCAGA+AGG | + | chr4_4:80221034-80221053 | None:intergenic | 35.0% | |
| CATCTATAAATACTGAGCCA+AGG | + | chr4_4:80221096-80221115 | None:intergenic | 35.0% | |
| TCTCATGTGTGACTATGTAA+TGG | + | chr4_4:80221218-80221237 | None:intergenic | 35.0% | |
| TTACATAGTCACACATGAGA+AGG | - | chr4_4:80221218-80221237 | Msa0707000:intron | 35.0% | |
| CAAACCACAAGCAATATTCA+AGG | + | chr4_4:80221297-80221316 | None:intergenic | 35.0% | |
| GAAGGGAAAACATAACAAAG+GGG | + | chr4_4:80221462-80221481 | None:intergenic | 35.0% | |
| ! | CTGATTTCAAGAAACGGATT+GGG | + | chr4_4:80221550-80221569 | None:intergenic | 35.0% |
| TCTGATTTCAAGAAACGGAT+TGG | + | chr4_4:80221551-80221570 | None:intergenic | 35.0% | |
| CAGCTTCTGATTTCAAGAAA+CGG | + | chr4_4:80221556-80221575 | None:intergenic | 35.0% | |
| ! | AGTGGGCTCAAAACAAATTA+TGG | + | chr4_4:80221580-80221599 | None:intergenic | 35.0% |
| !!! | CGGTACATGTTTTAACTAGT+GGG | + | chr4_4:80221597-80221616 | None:intergenic | 35.0% |
| CCACTAGTTAAAACATGTAC+CGG | - | chr4_4:80221595-80221614 | Msa0707000:intron | 35.0% | |
| CACTAGTTAAAACATGTACC+GGG | - | chr4_4:80221596-80221615 | Msa0707000:intron | 35.0% | |
| ACTAGTTAAAACATGTACCG+GGG | - | chr4_4:80221597-80221616 | Msa0707000:intron | 35.0% | |
| !!! | GAGATAAGTTTTATTCGCAG+TGG | - | chr4_4:80221696-80221715 | Msa0707000:intron | 35.0% |
| CTGAGACGAACATGTTATTA+TGG | - | chr4_4:80221734-80221753 | Msa0707000:intron | 35.0% | |
| AGTCAACTCTGTTTAGATCT+GGG | + | chr4_4:80221946-80221965 | None:intergenic | 35.0% | |
| AAGTCAACTCTGTTTAGATC+TGG | + | chr4_4:80221947-80221966 | None:intergenic | 35.0% | |
| ! | ATCTAAACAGAGTTGACTTC+AGG | - | chr4_4:80221948-80221967 | Msa0707000:intron | 35.0% |
| TGAATATGTCTTTGAATGCG+GGG | - | chr4_4:80222276-80222295 | Msa0707000:CDS | 35.0% | |
| ATAACTCAAGATCTGTCTTG+TGG | - | chr4_4:80222376-80222395 | Msa0707000:intron | 35.0% | |
| TTGAACTGGGATCTAATATC+TGG | + | chr4_4:80222821-80222840 | None:intergenic | 35.0% | |
| !! | ATAGAGCACTGTATTGAACT+GGG | + | chr4_4:80222834-80222853 | None:intergenic | 35.0% |
| TCAAAACAGACTCTTTCACT+GGG | + | chr4_4:80222872-80222891 | None:intergenic | 35.0% | |
| TTGTTTACATTTCAGGACTG+AGG | - | chr4_4:80223060-80223079 | Msa0707000:CDS | 35.0% | |
| ! | ACATGTCAATACATTTGCTG+AGG | - | chr4_4:80223474-80223493 | Msa0707000:intron | 35.0% |
| TGATGATTATGACGATGATG+AGG | + | chr4_4:80223609-80223628 | None:intergenic | 35.0% | |
| ! | CTGTAAAAGCTTTAGCTGTT+TGG | + | chr4_4:80223731-80223750 | None:intergenic | 35.0% |
| TTAAAACCAATCTCATTGGG+AGG | - | chr4_4:80223939-80223958 | Msa0707000:intron | 35.0% | |
| AGATAATAGTTCAGCATGCA+TGG | + | chr4_4:80224056-80224075 | None:intergenic | 35.0% | |
| CTTCATTAATGGAAGTGGTA+CGG | - | chr4_4:80224169-80224188 | Msa0707000:CDS | 35.0% | |
| TCGTACATAAACACATTCAC+AGG | + | chr4_4:80224205-80224224 | None:intergenic | 35.0% | |
| TGGTTTATTGAACAACCTTG+GGG | + | chr4_4:80224421-80224440 | None:intergenic | 35.0% | |
| TAAACCATTACTTGAAGGAG+TGG | - | chr4_4:80224434-80224453 | Msa0707000:five_prime_UTR | 35.0% | |
| !! | CGGTGAAAATGGACTATTTC+CGG | + | chr4_4:80215878-80215897 | None:intergenic | 40.0% |
| GTAAAGTGTGAGAAAGTGAG+AGG | + | chr4_4:80216016-80216035 | None:intergenic | 40.0% | |
| CCTGCATAAATCGAAGAGTT+AGG | + | chr4_4:80216065-80216084 | None:intergenic | 40.0% | |
| CCTAACTCTTCGATTTATGC+AGG | - | chr4_4:80216062-80216081 | Msa0707000:CDS | 40.0% | |
| AACGTTAGGTAAACCTGCTA+CGG | - | chr4_4:80216206-80216225 | Msa0707000:intron | 40.0% | |
| !!! | CTGCTTTTGAGGCAAGATAT+TGG | + | chr4_4:80216307-80216326 | None:intergenic | 40.0% |
| !! | ACCTTCTTCTTCTGCTTTTG+AGG | + | chr4_4:80216318-80216337 | None:intergenic | 40.0% |
| GCAAGTTGTGAATACGAAAC+TGG | + | chr4_4:80216522-80216541 | None:intergenic | 40.0% | |
| TGGATTCAGATTGAAACTCG+TGG | - | chr4_4:80216848-80216867 | Msa0707000:CDS | 40.0% | |
| ! | GCCAGAATTTTATCTGACAC+TGG | - | chr4_4:80217063-80217082 | Msa0707000:intron | 40.0% |
| ACAGAGCTATTGTTGCTCTT+GGG | - | chr4_4:80217338-80217357 | Msa0707000:intron | 40.0% | |
| AGGAGAGATGGGAAATTACT+AGG | - | chr4_4:80217398-80217417 | Msa0707000:CDS | 40.0% | |
| TCGTGTACCAATCTCACTTT+GGG | + | chr4_4:80217457-80217476 | None:intergenic | 40.0% | |
| TATGCTCCGACCAATTAAAC+TGG | - | chr4_4:80217565-80217584 | Msa0707000:intron | 40.0% | |
| ! | CAAAGGTGCGATATCAAGAA+TGG | + | chr4_4:80217651-80217670 | None:intergenic | 40.0% |
| CTTGATATCGCACCTTTGAA+TGG | - | chr4_4:80217653-80217672 | Msa0707000:intron | 40.0% | |
| TGATATCGCACCTTTGAATG+GGG | - | chr4_4:80217655-80217674 | Msa0707000:intron | 40.0% | |
| AGAACTCTGTAATCCATGAG+AGG | - | chr4_4:80217692-80217711 | Msa0707000:intron | 40.0% | |
| TTCCCGTAGCCACTTATATT+TGG | - | chr4_4:80218162-80218181 | Msa0707000:intron | 40.0% | |
| ! | CTCACTTAATTTAGGACGGA+GGG | + | chr4_4:80218266-80218285 | None:intergenic | 40.0% |
| TACAAAAGGCTCGCTTATTC+TGG | - | chr4_4:80218517-80218536 | Msa0707000:intron | 40.0% | |
| ACAAAAGGCTCGCTTATTCT+GGG | - | chr4_4:80218518-80218537 | Msa0707000:intron | 40.0% | |
| TTTAGGTCTCTGGTCAGAAA+AGG | - | chr4_4:80218556-80218575 | Msa0707000:intron | 40.0% | |
| ! | AAGCGAAAGAAAGGCATACT+TGG | - | chr4_4:80218793-80218812 | Msa0707000:intron | 40.0% |
| ! | AGCGAAAGAAAGGCATACTT+GGG | - | chr4_4:80218794-80218813 | Msa0707000:intron | 40.0% |
| TTATCTTGTCCTGATGCATG+TGG | - | chr4_4:80218864-80218883 | Msa0707000:intron | 40.0% | |
| TATCTTGTCCTGATGCATGT+GGG | - | chr4_4:80218865-80218884 | Msa0707000:intron | 40.0% | |
| ATTTCATCAGAGAGAGTGAG+AGG | + | chr4_4:80218987-80219006 | None:intergenic | 40.0% | |
| ! | TGCTTCACCTTTTTCTTTGG+GGG | + | chr4_4:80219128-80219147 | None:intergenic | 40.0% |
| ! | CCTTGCTTCACCTTTTTCTT+TGG | + | chr4_4:80219131-80219150 | None:intergenic | 40.0% |
| CCAAAGAAAAAGGTGAAGCA+AGG | - | chr4_4:80219128-80219147 | Msa0707000:intron | 40.0% | |
| ACCTGTTCAATGTGAAGCAT+CGG | + | chr4_4:80219172-80219191 | None:intergenic | 40.0% | |
| ACGTGAATTACCCGTATTGT+GGG | + | chr4_4:80219272-80219291 | None:intergenic | 40.0% | |
| TAAAATCCGCCACAAGCAAA+GGG | + | chr4_4:80219621-80219640 | None:intergenic | 40.0% | |
| ATAAAATCCGCCACAAGCAA+AGG | + | chr4_4:80219622-80219641 | None:intergenic | 40.0% | |
| TAAAAACGTTACGTGCCCAT+AGG | + | chr4_4:80219654-80219673 | None:intergenic | 40.0% | |
| ATGCTTCACAATTGAGTCTG+CGG | + | chr4_4:80219801-80219820 | None:intergenic | 40.0% | |
| !! | CGCCAAGCTCTAAATAAAAC+AGG | + | chr4_4:80219841-80219860 | None:intergenic | 40.0% |
| !!! | ATTTTTGGTCAAAGCCTCGA+AGG | + | chr4_4:80219870-80219889 | None:intergenic | 40.0% |
| !! | TCTGCCTGATTGGTTCTTTT+CGG | - | chr4_4:80219948-80219967 | Msa0707000:intron | 40.0% |
| AATCCCGAAAAGAACCAATC+AGG | + | chr4_4:80219955-80219974 | None:intergenic | 40.0% | |
| AGTTATAGACTTCAGGCTCA+GGG | + | chr4_4:80220003-80220022 | None:intergenic | 40.0% | |
| GCTAAAAGGAGGAAACATAG+AGG | - | chr4_4:80220035-80220054 | Msa0707000:intron | 40.0% | |
| GCTTCGGATGATAGACTATA+TGG | + | chr4_4:80220334-80220353 | None:intergenic | 40.0% | |
| TGTAGAAATGCTGGATTTCC+AGG | + | chr4_4:80220405-80220424 | None:intergenic | 40.0% | |
| ACCGCATAATGTAGAAATGC+TGG | + | chr4_4:80220414-80220433 | None:intergenic | 40.0% | |
| TTCTACATTATGCGGTACTC+GGG | - | chr4_4:80220418-80220437 | Msa0707000:intron | 40.0% | |
| TTTGTGCATATTTCGGCTCA+TGG | - | chr4_4:80220650-80220669 | Msa0707000:intron | 40.0% | |
| GAAAGACGAGAGATTCTGAA+GGG | + | chr4_4:80220818-80220837 | None:intergenic | 40.0% | |
| TGAAAGACGAGAGATTCTGA+AGG | + | chr4_4:80220819-80220838 | None:intergenic | 40.0% | |
| GAATCTCTCGTCTTTCACAT+TGG | - | chr4_4:80220822-80220841 | Msa0707000:intron | 40.0% | |
| TCCATTCTGACAAGAGTGAA+AGG | + | chr4_4:80220867-80220886 | None:intergenic | 40.0% | |
| ! | GAATTTCTAAGGACCCACAT+GGG | + | chr4_4:80220918-80220937 | None:intergenic | 40.0% |
| ! | TGAATTTCTAAGGACCCACA+TGG | + | chr4_4:80220919-80220938 | None:intergenic | 40.0% |
| ! | ACTAGCAATACCTTCTGGTT+TGG | - | chr4_4:80221021-80221040 | Msa0707000:intron | 40.0% |
| TCTGCCTTGAATATTGCTTG+TGG | - | chr4_4:80221290-80221309 | Msa0707000:intron | 40.0% | |
| TCTCTCTCTCTCTCTGTTAT+GGG | - | chr4_4:80221423-80221442 | Msa0707000:intron | 40.0% | |
| !!! | CCGGTACATGTTTTAACTAG+TGG | + | chr4_4:80221598-80221617 | None:intergenic | 40.0% |
| !!! | AAGTTTTATTCGCAGTGGTC+TGG | - | chr4_4:80221701-80221720 | Msa0707000:intron | 40.0% |
| TTATGGAAATTGCAGGAACC+AGG | - | chr4_4:80221751-80221770 | Msa0707000:intron | 40.0% | |
| TATGGAAATTGCAGGAACCA+GGG | - | chr4_4:80221752-80221771 | Msa0707000:intron | 40.0% | |
| !! | TTGTTTCTGAGATAGCAGCA+AGG | - | chr4_4:80222014-80222033 | Msa0707000:intron | 40.0% |
| !! | TGTTTCTGAGATAGCAGCAA+GGG | - | chr4_4:80222015-80222034 | Msa0707000:intron | 40.0% |
| ! | GAGGATTGTGTTACTACCTA+AGG | + | chr4_4:80222062-80222081 | None:intergenic | 40.0% |
| !! | CTTAAAGGGTATTCTTCTGC+AGG | - | chr4_4:80222178-80222197 | Msa0707000:intron | 40.0% |
| ! | TGTCTTGTGGTTTTTGTGTG+TGG | - | chr4_4:80222389-80222408 | Msa0707000:intron | 40.0% |
| TAGCAAGAACATCGTGCAAA+TGG | + | chr4_4:80222648-80222667 | None:intergenic | 40.0% | |
| TCGAGAGCTAGATCTTTAGA+TGG | - | chr4_4:80222700-80222719 | Msa0707000:intron | 40.0% | |
| GAGCTAGATCTTTAGATGGT+TGG | - | chr4_4:80222704-80222723 | Msa0707000:intron | 40.0% | |
| CAATCATCACAAACTTCCCA+AGG | + | chr4_4:80222767-80222786 | None:intergenic | 40.0% | |
| !! | GATAGAGCACTGTATTGAAC+TGG | + | chr4_4:80222835-80222854 | None:intergenic | 40.0% |
| AGTGCTCTATCAACTTCTGT+TGG | - | chr4_4:80222844-80222863 | Msa0707000:intron | 40.0% | |
| CTCAAAACAGACTCTTTCAC+TGG | + | chr4_4:80222873-80222892 | None:intergenic | 40.0% | |
| ! | CAGTGAAAGAGTCTGTTTTG+AGG | - | chr4_4:80222871-80222890 | Msa0707000:intron | 40.0% |
| ! | GAGGCAATTTTGTGTGTACT+TGG | - | chr4_4:80222890-80222909 | Msa0707000:intron | 40.0% |
| ! | TTTACCGTCTTTTCATTGGC+TGG | - | chr4_4:80223023-80223042 | Msa0707000:intron | 40.0% |
| !! | TTACCGTCTTTTCATTGGCT+GGG | - | chr4_4:80223024-80223043 | Msa0707000:intron | 40.0% |
| AGGCAGTGTGCATAAATACT+AGG | + | chr4_4:80223309-80223328 | None:intergenic | 40.0% | |
| TACAGGAGATGGGAAAAAGT+CGG | - | chr4_4:80223407-80223426 | Msa0707000:intron | 40.0% | |
| ! | GTTGGTTCAGATGGTTACAA+AGG | - | chr4_4:80223651-80223670 | Msa0707000:intron | 40.0% |
| AATATGCCTCCCAATGAGAT+TGG | + | chr4_4:80223948-80223967 | None:intergenic | 40.0% | |
| TTCTTCGGATACCTACATCA+AGG | + | chr4_4:80224095-80224114 | None:intergenic | 40.0% | |
| TGGATACTGAGGAAGTTCTT+CGG | + | chr4_4:80224110-80224129 | None:intergenic | 40.0% | |
| AGAACTTCCTCAGTATCCAA+TGG | - | chr4_4:80224111-80224130 | Msa0707000:CDS | 40.0% | |
| !! | GGGTATGTTGGCTTCATTAA+TGG | - | chr4_4:80224158-80224177 | Msa0707000:CDS | 40.0% |
| ! | GTTGGCTTCATTAATGGAAG+TGG | - | chr4_4:80224164-80224183 | Msa0707000:CDS | 40.0% |
| ATGTGTTTATGTACGAGCGA+TGG | - | chr4_4:80224209-80224228 | Msa0707000:intron | 40.0% | |
| ! | TGGTGATCAAGGCATTAATC+TGG | - | chr4_4:80224229-80224248 | Msa0707000:intron | 40.0% |
| ! | AAGGCATTAATCTGGATGCA+AGG | - | chr4_4:80224237-80224256 | Msa0707000:intron | 40.0% |
| CGATTTATGCAGGACTCTTC+CGG | - | chr4_4:80216072-80216091 | Msa0707000:CDS | 45.0% | |
| GGTTATCAGATCCATTAGCG+TGG | + | chr4_4:80216100-80216119 | None:intergenic | 45.0% | |
| ! | TTCGATCTCTTTTCCGTAGC+AGG | + | chr4_4:80216222-80216241 | None:intergenic | 45.0% |
| GCCTCAAAAGCAGAAGAAGA+AGG | - | chr4_4:80216314-80216333 | Msa0707000:intron | 45.0% | |
| ! | ACTAGCTGCTACTTCTGATC+AGG | - | chr4_4:80216557-80216576 | Msa0707000:intron | 45.0% |
| GGTTTCAGAGAAGTTCTCAG+AGG | - | chr4_4:80216673-80216692 | Msa0707000:intron | 45.0% | |
| AGAAGAGAAGGAGCCAATGA+AGG | + | chr4_4:80216750-80216769 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCTTCTCTTCTCA+TGG | - | chr4_4:80216752-80216771 | Msa0707000:intron | 45.0% |
| GAGCATACCATGAGAAGAGA+AGG | + | chr4_4:80216762-80216781 | None:intergenic | 45.0% | |
| !!! | GCTGCTTGTGCTATTGGTTT+TGG | - | chr4_4:80216828-80216847 | Msa0707000:CDS | 45.0% |
| GTAGCTTAATCAGCAGTGTG+AGG | - | chr4_4:80217005-80217024 | Msa0707000:intron | 45.0% | |
| !! | TTATCTGACACTGGTTCCCA+AGG | - | chr4_4:80217072-80217091 | Msa0707000:intron | 45.0% |
| GACAGAGCTATTGTTGCTCT+TGG | - | chr4_4:80217337-80217356 | Msa0707000:intron | 45.0% | |
| ATGGAGACCCAAAGTGAGAT+TGG | - | chr4_4:80217447-80217466 | Msa0707000:CDS | 45.0% | |
| CTCGTGTACCAATCTCACTT+TGG | + | chr4_4:80217458-80217477 | None:intergenic | 45.0% | |
| TATGTTTGAACTGTGGAGCC+TGG | - | chr4_4:80217625-80217644 | Msa0707000:CDS | 45.0% | |
| CTCTGTAATCCATGAGAGGA+AGG | - | chr4_4:80217696-80217715 | Msa0707000:intron | 45.0% | |
| AGCATATGTAAGCGCCTTCA+AGG | + | chr4_4:80218012-80218031 | None:intergenic | 45.0% | |
| ! | TTGACGCGTTTTCTGTGACT+TGG | - | chr4_4:80218204-80218223 | Msa0707000:intron | 45.0% |
| ! | TGACGCGTTTTCTGTGACTT+GGG | - | chr4_4:80218205-80218224 | Msa0707000:intron | 45.0% |
| ! | GCTCACTTAATTTAGGACGG+AGG | + | chr4_4:80218267-80218286 | None:intergenic | 45.0% |
| GGACGAAGGGAGTAAGATTT+AGG | - | chr4_4:80218539-80218558 | Msa0707000:intron | 45.0% | |
| GGGAGTAAGATTTAGGTCTC+TGG | - | chr4_4:80218546-80218565 | Msa0707000:intron | 45.0% | |
| !! | CCTTTCTTTCGCTTTTGCGA+AGG | + | chr4_4:80218787-80218806 | None:intergenic | 45.0% |
| CCTTCGCAAAAGCGAAAGAA+AGG | - | chr4_4:80218784-80218803 | Msa0707000:intron | 45.0% | |
| ! | GCGAAAGAAAGGCATACTTG+GGG | - | chr4_4:80218795-80218814 | Msa0707000:intron | 45.0% |
| ! | CGAAAGAAAGGCATACTTGG+GGG | - | chr4_4:80218796-80218815 | Msa0707000:intron | 45.0% |
| ! | AAAGGCATACTTGGGGGTAA+AGG | - | chr4_4:80218802-80218821 | Msa0707000:intron | 45.0% |
| ! | GCTTCACCTTTTTCTTTGGG+GGG | + | chr4_4:80219127-80219146 | None:intergenic | 45.0% |
| ACCGATGCTTCACATTGAAC+AGG | - | chr4_4:80219168-80219187 | Msa0707000:intron | 45.0% | |
| GGGATGGCAATGGATACATA+CGG | - | chr4_4:80219215-80219234 | Msa0707000:intron | 45.0% | |
| CACGTGAATTACCCGTATTG+TGG | + | chr4_4:80219273-80219292 | None:intergenic | 45.0% | |
| GGGTAATTCACGTGTATTCG+CGG | - | chr4_4:80219279-80219298 | Msa0707000:intron | 45.0% | |
| ! | CGCGGATATCCATGGATTAT+TGG | - | chr4_4:80219297-80219316 | Msa0707000:intron | 45.0% |
| TACATGTCCGGTGTTTGAGT+CGG | - | chr4_4:80219735-80219754 | Msa0707000:intron | 45.0% | |
| !! | CTGCCTGATTGGTTCTTTTC+GGG | - | chr4_4:80219949-80219968 | Msa0707000:intron | 45.0% |
| CAGTTATAGACTTCAGGCTC+AGG | + | chr4_4:80220004-80220023 | None:intergenic | 45.0% | |
| ! | GAGTCTTCTCAAAGCACTCA+AGG | + | chr4_4:80220373-80220392 | None:intergenic | 45.0% |
| CTGGATTTCCAGGATCTAGA+GGG | + | chr4_4:80220395-80220414 | None:intergenic | 45.0% | |
| CTACAAAGGACCTTAAACCG+TGG | - | chr4_4:80220695-80220714 | Msa0707000:intron | 45.0% | |
| ACCTTAAACCGTGGTCCAAT+GGG | - | chr4_4:80220704-80220723 | Msa0707000:intron | 45.0% | |
| GCCTTTCACTCTTGTCAGAA+TGG | - | chr4_4:80220863-80220882 | Msa0707000:intron | 45.0% | |
| CATGGGTAACATAGACCCTA+AGG | + | chr4_4:80220901-80220920 | None:intergenic | 45.0% | |
| TAGGGTCTATGTTACCCATG+TGG | - | chr4_4:80220901-80220920 | Msa0707000:intron | 45.0% | |
| AGGGTCTATGTTACCCATGT+GGG | - | chr4_4:80220902-80220921 | Msa0707000:intron | 45.0% | |
| TTGCTAGTTGCTGCTACACT+CGG | + | chr4_4:80221009-80221028 | None:intergenic | 45.0% | |
| CAGCAACTAGCAATACCTTC+TGG | - | chr4_4:80221016-80221035 | Msa0707000:intron | 45.0% | |
| CATGAGAAGGCAGCAAACAT+AGG | - | chr4_4:80221231-80221250 | Msa0707000:intron | 45.0% | |
| AAGGCAGCAAACATAGGCAA+TGG | - | chr4_4:80221237-80221256 | Msa0707000:intron | 45.0% | |
| CTCTCTCTCTCTCTCTGTTA+TGG | - | chr4_4:80221422-80221441 | Msa0707000:intron | 45.0% | |
| GAATAGTACTGTCTAAGCCC+TGG | + | chr4_4:80221772-80221791 | None:intergenic | 45.0% | |
| CAGGATTTCATCTGCTGATC+CGG | - | chr4_4:80221967-80221986 | Msa0707000:intron | 45.0% | |
| GAACCAATACACATACCTCC+AGG | + | chr4_4:80222217-80222236 | None:intergenic | 45.0% | |
| GGCTCTTAGTCCTTAACTAC+TGG | + | chr4_4:80222321-80222340 | None:intergenic | 45.0% | |
| ! | TGTGGTTTTTGTGTGTGGAG+AGG | - | chr4_4:80222394-80222413 | Msa0707000:intron | 45.0% |
| TTGCTAGAGTTTCTCTAGCG+AGG | - | chr4_4:80222662-80222681 | Msa0707000:intron | 45.0% | |
| ! | GAAAATATGATAGCGCCGAG+AGG | - | chr4_4:80222912-80222931 | Msa0707000:intron | 45.0% |
| CAACCCAGCCAATGAAAAGA+CGG | + | chr4_4:80223030-80223049 | None:intergenic | 45.0% | |
| TGAGAATCTCCCTGGTCAAA+CGG | + | chr4_4:80223105-80223124 | None:intergenic | 45.0% | |
| TGGTAACTTGAGAATCTCCC+TGG | + | chr4_4:80223113-80223132 | None:intergenic | 45.0% | |
| GTTACCAGATGCATCATCGA+AGG | - | chr4_4:80223126-80223145 | Msa0707000:CDS | 45.0% | |
| CTTTCCTTCGATGATGCATC+TGG | + | chr4_4:80223133-80223152 | None:intergenic | 45.0% | |
| CCTGGAAAGCAGCAAATAGT+AGG | + | chr4_4:80223329-80223348 | None:intergenic | 45.0% | |
| !! | CCTACTATTTGCTGCTTTCC+AGG | - | chr4_4:80223326-80223345 | Msa0707000:intron | 45.0% |
| ACGGAAAGAACTCTCTAACC+TGG | + | chr4_4:80223347-80223366 | None:intergenic | 45.0% | |
| AGCTAGAGTTGTACAGGAGA+TGG | - | chr4_4:80223396-80223415 | Msa0707000:intron | 45.0% | |
| GCTAGAGTTGTACAGGAGAT+GGG | - | chr4_4:80223397-80223416 | Msa0707000:intron | 45.0% | |
| ACAGGAGATGGGAAAAAGTC+GGG | - | chr4_4:80223408-80223427 | Msa0707000:intron | 45.0% | |
| ! | GGCATACAGGATGTTGATGA+AGG | - | chr4_4:80223448-80223467 | Msa0707000:intron | 45.0% |
| GGCTGCAGATTTGAATGACT+CGG | - | chr4_4:80223495-80223514 | Msa0707000:intron | 45.0% | |
| !! | CATGCTTAGGAGTGTTGACA+AGG | - | chr4_4:80223567-80223586 | Msa0707000:CDS | 45.0% |
| ! | GTTTGGTGAACACCGAAGAT+TGG | + | chr4_4:80223714-80223733 | None:intergenic | 45.0% |
| TTACAGCGTCGTAGTTTCAC+AGG | - | chr4_4:80223905-80223924 | Msa0707000:intron | 45.0% | |
| AGCAGTTCCATTGGATACTG+AGG | + | chr4_4:80224121-80224140 | None:intergenic | 45.0% | |
| TCAGTATCCAATGGAACTGC+TGG | - | chr4_4:80224120-80224139 | Msa0707000:CDS | 45.0% | |
| ATCTCTACCAGCAGTTCCAT+TGG | + | chr4_4:80224130-80224149 | None:intergenic | 45.0% | |
| TGCTGGTAGAGATACCATTG+CGG | - | chr4_4:80224137-80224156 | Msa0707000:CDS | 45.0% | |
| AGATACCATTGCGGGTATGT+TGG | - | chr4_4:80224146-80224165 | Msa0707000:CDS | 45.0% | |
| ! | CACTCTACATGCCCGTTTTA+AGG | - | chr4_4:80224353-80224372 | Msa0707000:five_prime_UTR | 45.0% |
| ! | AACAACCTTGGGGTGCTTAA+CGG | + | chr4_4:80224411-80224430 | None:intergenic | 45.0% |
| ACCATTACTTGAAGGAGTGG+TGG | - | chr4_4:80224437-80224456 | Msa0707000:five_prime_UTR | 45.0% | |
| TCCACCACTCCTTCAAGTAA+TGG | + | chr4_4:80224441-80224460 | None:intergenic | 45.0% | |
| !!! | TAATGTTTTTTTTTTTTTAA+CGG | - | chr4_4:80216644-80216663 | Msa0707000:intron | 5.0% |
| !!! | TTTTAAAAAATTTTATCAAA+AGG | + | chr4_4:80216803-80216822 | None:intergenic | 5.0% |
| !!! | ATATATATATACTTATTTTT+TGG | + | chr4_4:80219474-80219493 | None:intergenic | 5.0% |
| !! | TATATATATATATATGTATA+TGG | - | chr4_4:80219485-80219504 | Msa0707000:intron | 5.0% |
| !!! | ATATTTTAGTAATTTATTAA+CGG | - | chr4_4:80219508-80219527 | Msa0707000:intron | 5.0% |
| AGTGTGGCCAACGGTGAAAA+TGG | + | chr4_4:80215889-80215908 | None:intergenic | 50.0% | |
| TTTCTTCGTCACCGTGAGTG+TGG | + | chr4_4:80215905-80215924 | None:intergenic | 50.0% | |
| CAGATCCATTAGCGTGGTTC+CGG | + | chr4_4:80216094-80216113 | None:intergenic | 50.0% | |
| GTCGAAGATGAAGATGACGC+CGG | + | chr4_4:80216141-80216160 | None:intergenic | 50.0% | |
| ! | TCGAACAGCAGCTTTAGCAG+CGG | + | chr4_4:80216283-80216302 | None:intergenic | 50.0% |
| ACCAATAGCACAAGCAGCCA+GGG | + | chr4_4:80216826-80216845 | None:intergenic | 50.0% | |
| AACCAATAGCACAAGCAGCC+AGG | + | chr4_4:80216827-80216846 | None:intergenic | 50.0% | |
| ! | AGAGCATCCCAATTAGGGGT+GGG | + | chr4_4:80217120-80217139 | None:intergenic | 50.0% |
| ! | AGCCAGAGCATCCCAATTAG+GGG | + | chr4_4:80217124-80217143 | None:intergenic | 50.0% |
| ! | CAGCCAGAGCATCCCAATTA+GGG | + | chr4_4:80217125-80217144 | None:intergenic | 50.0% |
| ! | TCAGCCAGAGCATCCCAATT+AGG | + | chr4_4:80217126-80217145 | None:intergenic | 50.0% |
| GTGCGATATCAAGAATGGCC+AGG | + | chr4_4:80217646-80217665 | None:intergenic | 50.0% | |
| CTGTAGGATGCCCCATTCAA+AGG | + | chr4_4:80217668-80217687 | None:intergenic | 50.0% | |
| TCGGAGACTGCAATCCTTGA+AGG | - | chr4_4:80217995-80218014 | Msa0707000:intron | 50.0% | |
| !! | CTCGCTTATTCTGGGACGAA+GGG | - | chr4_4:80218526-80218545 | Msa0707000:intron | 50.0% |
| AGGTCTCTGGTCAGAAAAGG+TGG | - | chr4_4:80218559-80218578 | Msa0707000:intron | 50.0% | |
| !! | GTGAAGCATCGGTGCTACAT+AGG | + | chr4_4:80219161-80219180 | None:intergenic | 50.0% |
| CCTAAACCGCATGTCAGTGT+CGG | + | chr4_4:80219197-80219216 | None:intergenic | 50.0% | |
| CGACACTGACATGCGGTTTA+GGG | - | chr4_4:80219195-80219214 | Msa0707000:intron | 50.0% | |
| ACTGACATGCGGTTTAGGGA+TGG | - | chr4_4:80219199-80219218 | Msa0707000:intron | 50.0% | |
| ATGCGGTTTAGGGATGGCAA+TGG | - | chr4_4:80219205-80219224 | Msa0707000:intron | 50.0% | |
| CGTGTATTCGCGGATATCCA+TGG | - | chr4_4:80219289-80219308 | Msa0707000:intron | 50.0% | |
| ! | TTAACGGGTACAGATACCCG+CGG | - | chr4_4:80219524-80219543 | Msa0707000:intron | 50.0% |
| ! | TTTGATGGTACACATGCCCG+CGG | + | chr4_4:80219544-80219563 | None:intergenic | 50.0% |
| !!! | CTTGTGGCGGATTTTATCCG+TGG | - | chr4_4:80219625-80219644 | Msa0707000:intron | 50.0% |
| TACGTGCCCATAGGTATCCA+CGG | + | chr4_4:80219645-80219664 | None:intergenic | 50.0% | |
| !! | TGAAGCACCGACTCAAACAC+CGG | + | chr4_4:80219745-80219764 | None:intergenic | 50.0% |
| ! | TGTTTGAGTCGGTGCTTCAC+AGG | - | chr4_4:80219746-80219765 | Msa0707000:intron | 50.0% |
| TTTCGTGGCTTCTGCCTGAT+TGG | - | chr4_4:80219938-80219957 | Msa0707000:intron | 50.0% | |
| AGAAGACTCCCTCTAGATCC+TGG | - | chr4_4:80220384-80220403 | Msa0707000:intron | 50.0% | |
| GCTGGATTTCCAGGATCTAG+AGG | + | chr4_4:80220396-80220415 | None:intergenic | 50.0% | |
| GCATATTTCGGCTCATGGCT+TGG | - | chr4_4:80220655-80220674 | Msa0707000:intron | 50.0% | |
| GACCTTAAACCGTGGTCCAA+TGG | - | chr4_4:80220703-80220722 | Msa0707000:intron | 50.0% | |
| CCTTAAACCGTGGTCCAATG+GGG | - | chr4_4:80220705-80220724 | Msa0707000:intron | 50.0% | |
| ATGTAGTCCCCATTGGACCA+CGG | + | chr4_4:80220715-80220734 | None:intergenic | 50.0% | |
| GTGGTCTATGTAGTCCCCAT+TGG | + | chr4_4:80220722-80220741 | None:intergenic | 50.0% | |
| TACACTCGGGCAAAGGATGA+AGG | + | chr4_4:80220995-80221014 | None:intergenic | 50.0% | |
| TGCTAGTTGCTGCTACACTC+GGG | + | chr4_4:80221008-80221027 | None:intergenic | 50.0% | |
| AGAGAGAGAGGAATGCAGCA+GGG | + | chr4_4:80221406-80221425 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr4_4:80221416-80221435 | None:intergenic | 50.0% | |
| ! | AGAGCATTCCTCACAGCAAC+CGG | + | chr4_4:80221989-80222008 | None:intergenic | 50.0% |
| AGGCCATCGCAACAGCATAA+GGG | + | chr4_4:80222042-80222061 | None:intergenic | 50.0% | |
| AAGGCCATCGCAACAGCATA+AGG | + | chr4_4:80222043-80222062 | None:intergenic | 50.0% | |
| TATGCTGTTGCGATGGCCTT+AGG | - | chr4_4:80222043-80222062 | Msa0707000:intron | 50.0% | |
| ! | CAGCCTGGAGGTATGTGTAT+TGG | - | chr4_4:80222211-80222230 | Msa0707000:CDS | 50.0% |
| GCACGGGTCTAGAAAAGCTA+CGG | + | chr4_4:80223366-80223385 | None:intergenic | 50.0% | |
| TCTAGCTGCTGCATGAAGCA+CGG | + | chr4_4:80223383-80223402 | None:intergenic | 50.0% | |
| TGCAGCAGCTAGAGTTGTAC+AGG | - | chr4_4:80223390-80223409 | Msa0707000:intron | 50.0% | |
| GCTGGTAGAGATACCATTGC+GGG | - | chr4_4:80224138-80224157 | Msa0707000:CDS | 50.0% | |
| TGAAGCCAACATACCCGCAA+TGG | + | chr4_4:80224154-80224173 | None:intergenic | 50.0% | |
| TGTACGAGCGATGGTGATCA+AGG | - | chr4_4:80224218-80224237 | Msa0707000:intron | 50.0% | |
| CAGAACTCTCTGATCCAGCT+TGG | - | chr4_4:80224301-80224320 | Msa0707000:five_prime_UTR | 50.0% | |
| AAAAGAGCTGCTGACCAAGC+TGG | + | chr4_4:80224318-80224337 | None:intergenic | 50.0% | |
| TATCACCGTTAAGCACCCCA+AGG | - | chr4_4:80224403-80224422 | Msa0707000:five_prime_UTR | 50.0% | |
| TTCACCGTTGGCCACACTCA+CGG | - | chr4_4:80215891-80215910 | Msa0707000:CDS | 55.0% | |
| CTCTTCCGGAACCACGCTAA+TGG | - | chr4_4:80216086-80216105 | Msa0707000:CDS | 55.0% | |
| GATGAAGATGACGCCGGCAA+CGG | + | chr4_4:80216135-80216154 | None:intergenic | 55.0% | |
| GATGTTGACGGCGTTGCTGA+CGG | + | chr4_4:80216177-80216196 | None:intergenic | 55.0% | |
| ! | AGCAGCTTTAGCAGCGGAGA+TGG | + | chr4_4:80216277-80216296 | None:intergenic | 55.0% |
| ACCCTGGCTGCTTGTGCTAT+TGG | - | chr4_4:80216822-80216841 | Msa0707000:CDS | 55.0% | |
| GGTTCCCAAGGTTTGAGCTC+TGG | - | chr4_4:80217084-80217103 | Msa0707000:CDS | 55.0% | |
| ! | TCCCAAGGTTTGAGCTCTGG+TGG | - | chr4_4:80217087-80217106 | Msa0707000:CDS | 55.0% |
| GCCACCAGAGCTCAAACCTT+GGG | + | chr4_4:80217091-80217110 | None:intergenic | 55.0% | |
| ! | CAAGGTTTGAGCTCTGGTGG+CGG | - | chr4_4:80217090-80217109 | Msa0707000:CDS | 55.0% |
| ! | AAGGTTTGAGCTCTGGTGGC+GGG | - | chr4_4:80217091-80217110 | Msa0707000:CDS | 55.0% |
| CGGGATACCCACCCCTAATT+GGG | - | chr4_4:80217110-80217129 | Msa0707000:CDS | 55.0% | |
| ! | CAGAGCATCCCAATTAGGGG+TGG | + | chr4_4:80217121-80217140 | None:intergenic | 55.0% |
| CACCCCTAATTGGGATGCTC+TGG | - | chr4_4:80217119-80217138 | Msa0707000:CDS | 55.0% | |
| CTGGCTGACATCGATGCAGT+TGG | - | chr4_4:80217138-80217157 | Msa0707000:CDS | 55.0% | |
| GCTGACATCGATGCAGTTGG+AGG | - | chr4_4:80217141-80217160 | Msa0707000:CDS | 55.0% | |
| CTTGGGCATGCCTCAGAGTT+TGG | - | chr4_4:80218222-80218241 | Msa0707000:intron | 55.0% | |
| !! | GCTCGCTTATTCTGGGACGA+AGG | - | chr4_4:80218525-80218544 | Msa0707000:intron | 55.0% |
| CTCACTGACCCACATGCATC+AGG | + | chr4_4:80218876-80218895 | None:intergenic | 55.0% | |
| AGGTGTCCGACACTGACATG+CGG | - | chr4_4:80219188-80219207 | Msa0707000:intron | 55.0% | |
| CCGACACTGACATGCGGTTT+AGG | - | chr4_4:80219194-80219213 | Msa0707000:intron | 55.0% | |
| ! | TAACGGGTACAGATACCCGC+GGG | - | chr4_4:80219525-80219544 | Msa0707000:intron | 55.0% |
| ! | TTGATGGTACACATGCCCGC+GGG | + | chr4_4:80219543-80219562 | None:intergenic | 55.0% |
| !! | CAAAGGGCGGTTGGCTTAAC+GGG | + | chr4_4:80219605-80219624 | None:intergenic | 55.0% |
| !! | GCAAAGGGCGGTTGGCTTAA+CGG | + | chr4_4:80219606-80219625 | None:intergenic | 55.0% |
| AATCCGCCACAAGCAAAGGG+CGG | + | chr4_4:80219618-80219637 | None:intergenic | 55.0% | |
| ! | GGCTCATGGCTTGGACCTAT+AGG | - | chr4_4:80220664-80220683 | Msa0707000:intron | 55.0% |
| CCCCATTGGACCACGGTTTA+AGG | + | chr4_4:80220708-80220727 | None:intergenic | 55.0% | |
| TTGCTGCTACACTCGGGCAA+AGG | + | chr4_4:80221002-80221021 | None:intergenic | 55.0% | |
| GAGAGAGAGAGGAATGCAGC+AGG | + | chr4_4:80221407-80221426 | None:intergenic | 55.0% | |
| GGTTGCTGTGAGGAATGCTC+TGG | - | chr4_4:80221988-80222007 | Msa0707000:intron | 55.0% | |
| GGACCCTTATGCTGTTGCGA+TGG | - | chr4_4:80222036-80222055 | Msa0707000:intron | 55.0% | |
| TGGGTGGTACCGTTTGACCA+GGG | - | chr4_4:80223093-80223112 | Msa0707000:CDS | 55.0% | |
| CTAGCTGCTGCATGAAGCAC+GGG | + | chr4_4:80223382-80223401 | None:intergenic | 55.0% | |
| TATGCCCACAGCGAAAGCAG+CGG | + | chr4_4:80223434-80223453 | None:intergenic | 55.0% | |
| TGCTTTCGCTGTGGGCATAC+AGG | - | chr4_4:80223435-80223454 | Msa0707000:intron | 55.0% | |
| GTCACCGTGAGTGTGGCCAA+CGG | + | chr4_4:80215898-80215917 | None:intergenic | 60.0% | |
| TGCTGACGGAGTTGGAGCAG+CGG | + | chr4_4:80216163-80216182 | None:intergenic | 60.0% | |
| CGCCACCAGAGCTCAAACCT+TGG | + | chr4_4:80217092-80217111 | None:intergenic | 60.0% | |
| GCGGGATACCCACCCCTAAT+TGG | - | chr4_4:80217109-80217128 | Msa0707000:CDS | 60.0% | |
| CGTATTGTGGGTACCCACGC+GGG | + | chr4_4:80219260-80219279 | None:intergenic | 60.0% | |
| CCGTATTGTGGGTACCCACG+CGG | + | chr4_4:80219261-80219280 | None:intergenic | 60.0% | |
| CCGCGTGGGTACCCACAATA+CGG | - | chr4_4:80219258-80219277 | Msa0707000:intron | 60.0% | |
| CGCGTGGGTACCCACAATAC+GGG | - | chr4_4:80219259-80219278 | Msa0707000:intron | 60.0% | |
| AGCCAACCGCCCTTTGCTTG+TGG | - | chr4_4:80219609-80219628 | Msa0707000:intron | 60.0% | |
| CAACCGCCCTTTGCTTGTGG+CGG | - | chr4_4:80219612-80219631 | Msa0707000:intron | 60.0% | |
| GGCACACGCAGCAAACCAGA+AGG | + | chr4_4:80221529-80221548 | None:intergenic | 60.0% | |
| CTGCTGATCCGGTTGCTGTG+AGG | - | chr4_4:80221978-80221997 | Msa0707000:intron | 60.0% | |
| GCAGGAAAGCAAGTGCAGCC+TGG | - | chr4_4:80222196-80222215 | Msa0707000:intron | 60.0% | |
| GGAAAGCAAGTGCAGCCTGG+AGG | - | chr4_4:80222199-80222218 | Msa0707000:CDS | 60.0% | |
| ! | AGGACTGAGGAGCGTGCTTC+TGG | - | chr4_4:80223073-80223092 | Msa0707000:CDS | 60.0% |
| ! | GGACTGAGGAGCGTGCTTCT+GGG | - | chr4_4:80223074-80223093 | Msa0707000:CDS | 60.0% |
| CTGGGTGGTACCGTTTGACC+AGG | - | chr4_4:80223092-80223111 | Msa0707000:CDS | 60.0% | |
| CGGCAACGGAGTTGGATCGG+CGG | + | chr4_4:80216121-80216140 | None:intergenic | 65.0% | |
| CGCCGATCCAACTCCGTTGC+CGG | - | chr4_4:80216119-80216138 | Msa0707000:CDS | 65.0% | |
| CGCCGGCAACGGAGTTGGAT+CGG | + | chr4_4:80216124-80216143 | None:intergenic | 65.0% | |
| GATGACGCCGGCAACGGAGT+TGG | + | chr4_4:80216129-80216148 | None:intergenic | 65.0% | |
| GACGGCGTTGCTGACGGAGT+TGG | + | chr4_4:80216171-80216190 | None:intergenic | 65.0% | |
| TACCCACGCGGGTATGGGGT+AGG | + | chr4_4:80219249-80219268 | None:intergenic | 65.0% | |
| TGGGTACCCACGCGGGTATG+GGG | + | chr4_4:80219253-80219272 | None:intergenic | 65.0% | |
| GTGGGTACCCACGCGGGTAT+GGG | + | chr4_4:80219254-80219273 | None:intergenic | 65.0% | |
| TGTGGGTACCCACGCGGGTA+TGG | + | chr4_4:80219255-80219274 | None:intergenic | 65.0% | |
| CGCCACAAGCAAAGGGCGGT+TGG | + | chr4_4:80219614-80219633 | None:intergenic | 65.0% | |
| GCTTGGCGGGAGATCCTTCG+AGG | - | chr4_4:80219853-80219872 | Msa0707000:CDS | 65.0% | |
| ! | CTGAGGAGCGTGCTTCTGGG+TGG | - | chr4_4:80223077-80223096 | Msa0707000:CDS | 65.0% |
| CGCCTACCCCATACCCGCGT+GGG | - | chr4_4:80219244-80219263 | Msa0707000:intron | 70.0% | |
| ! | TCGGGCCGCTGCTTTCGCTG+TGG | - | chr4_4:80223426-80223445 | Msa0707000:intron | 70.0% |
| ! | CGGGCCGCTGCTTTCGCTGT+GGG | - | chr4_4:80223427-80223446 | Msa0707000:intron | 70.0% |
| CGCGGGTATGGGGTAGGCGC+TGG | + | chr4_4:80219243-80219262 | None:intergenic | 75.0% | |
| GCGCCTACCCCATACCCGCG+TGG | - | chr4_4:80219243-80219262 | Msa0707000:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80215818 | 80224473 | 80215818 | ID=Msa0707000;Name=Msa0707000 |
| chr4_4 | mRNA | 80215818 | 80224473 | 80215818 | ID=Msa0707000-mRNA-1;Parent=Msa0707000;Name=Msa0707000-mRNA-1;_AED=0.12;_eAED=0.12;_QI=183|0.92|0.86|1|1|1|15|0|666 |
| chr4_4 | exon | 80215818 | 80216188 | 80215818 | ID=Msa0707000-mRNA-1:exon:26067;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80216753 | 80216943 | 80216753 | ID=Msa0707000-mRNA-1:exon:26066;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80217076 | 80217216 | 80217076 | ID=Msa0707000-mRNA-1:exon:26065;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80217358 | 80217478 | 80217358 | ID=Msa0707000-mRNA-1:exon:26064;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80217570 | 80217665 | 80217570 | ID=Msa0707000-mRNA-1:exon:26063;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80218071 | 80218091 | 80218071 | ID=Msa0707000-mRNA-1:exon:26062;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80218227 | 80218375 | 80218227 | ID=Msa0707000-mRNA-1:exon:26061;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80219852 | 80219952 | 80219852 | ID=Msa0707000-mRNA-1:exon:26060;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80221454 | 80221516 | 80221454 | ID=Msa0707000-mRNA-1:exon:26059;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80222197 | 80222303 | 80222197 | ID=Msa0707000-mRNA-1:exon:26058;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80223054 | 80223282 | 80223054 | ID=Msa0707000-mRNA-1:exon:26057;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80223518 | 80223610 | 80223518 | ID=Msa0707000-mRNA-1:exon:26056;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80223713 | 80223772 | 80223713 | ID=Msa0707000-mRNA-1:exon:26055;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80223956 | 80224207 | 80223956 | ID=Msa0707000-mRNA-1:exon:26054;Parent=Msa0707000-mRNA-1 |
| chr4_4 | exon | 80224285 | 80224473 | 80224285 | ID=Msa0707000-mRNA-1:exon:26053;Parent=Msa0707000-mRNA-1 |
| chr4_4 | five_prime_UTR | 80224291 | 80224473 | 80224291 | ID=Msa0707000-mRNA-1:five_prime_utr;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80224285 | 80224290 | 80224285 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80223956 | 80224207 | 80223956 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80223713 | 80223772 | 80223713 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80223518 | 80223610 | 80223518 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80223054 | 80223282 | 80223054 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80222197 | 80222303 | 80222197 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80221454 | 80221516 | 80221454 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80219852 | 80219952 | 80219852 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80218227 | 80218375 | 80218227 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80218071 | 80218091 | 80218071 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80217570 | 80217665 | 80217570 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80217358 | 80217478 | 80217358 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80217076 | 80217216 | 80217076 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80216753 | 80216943 | 80216753 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| chr4_4 | CDS | 80215818 | 80216188 | 80215818 | ID=Msa0707000-mRNA-1:cds;Parent=Msa0707000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
