AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1381100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381100 MtrunA17_Chr3g0144371 95.395 999 10 2 1 965 1 997 0.0 1918
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381100 AT1G49340.1 65.569 1002 300 10 1 965 1 994 0.0 1259
Msa1381100 AT1G49340.2 65.569 1002 300 10 1 965 1 994 0.0 1259
Msa1381100 AT1G49340.3 64.970 1002 299 10 1 965 1 987 0.0 1246
Msa1381100 AT1G49340.4 64.970 1002 299 10 1 965 1 987 0.0 1246
Msa1381100 AT1G51040.1 48.092 131 56 1 1 119 1 131 1.91e-30 127

Find 249 sgRNAs with CRISPR-Local

Find 672 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCCTGGTGGAGGCTCTTC+TGG 0.020770 tig0020421:+132941 Msa1381100:CDS
CTCTTTGGTTCCTTGCTTCT+TGG 0.122828 tig0020421:+133691 Msa1381100:CDS
GATCAATTGGCGCAAAATTT+AGG 0.189227 tig0020421:+132905 Msa1381100:CDS
CTATATCTTTGCAGGTTCTA+TGG 0.200532 tig0020421:+140908 Msa1381100:intron
TGGTTGCTACTCCATGTTTC+AGG 0.219119 tig0020421:-133938 None:intergenic
AGCTTTATAAACTGACAATT+TGG 0.238342 tig0020421:-133518 None:intergenic
TCATGTTGATCCCGCGCTTT+TGG 0.253730 tig0020421:+133057 Msa1381100:CDS
ATACGTGAACGGAATGATTA+TGG 0.262374 tig0020421:+134070 Msa1381100:CDS
GCCGAGGCGTGCTTGCTATC+TGG 0.268823 tig0020421:+133640 Msa1381100:CDS
CCATAGTGGTGCCACCATTT+AGG 0.270034 tig0020421:-139207 None:intergenic
GTCTTCGGATGGAAATAAAT+TGG 0.271562 tig0020421:+132608 Msa1381100:CDS
ACTGCTCTTTCTGCCGCTTT+AGG 0.272982 tig0020421:+138419 Msa1381100:CDS
CCACTGCCTTGGCGACTGCC+TGG 0.273617 tig0020421:-138368 None:intergenic
AACTCGATTGCGACTGATTT+AGG 0.275304 tig0020421:-132339 None:intergenic
GTCCTGGTGGAGGCTCTTCT+GGG 0.276759 tig0020421:+132942 Msa1381100:CDS
CACAAGCCAGGGCCTTCTTC+AGG 0.282074 tig0020421:+141083 Msa1381100:CDS
ATTGCCCTTCAAGCTGTAAA+TGG 0.303694 tig0020421:+135815 Msa1381100:CDS
GTTATCCGCGTTTGCGGAAC+AGG 0.311830 tig0020421:+132527 Msa1381100:CDS
ATTCCTTTACTCACTCCTTT+TGG 0.328243 tig0020421:+132379 Msa1381100:CDS
TTTCCATCCGAAGACGAAAT+AGG 0.332474 tig0020421:-132600 None:intergenic
TCTTTGGTTCCTTGCTTCTT+GGG 0.333861 tig0020421:+133692 Msa1381100:CDS
CTTTCTCATTGCCACTGCCT+TGG 0.336066 tig0020421:-138379 None:intergenic
AGTCGGACTACCATTATAAT+TGG 0.336821 tig0020421:-132765 None:intergenic
AGAGGTTCGGTTGTGACTAA+TGG 0.338691 tig0020421:+132854 Msa1381100:CDS
AAGACAGCTGGCATTAGATT+TGG 0.340860 tig0020421:-139277 None:intergenic
CGACGAAGATTGTGCAGCTT+TGG 0.340909 tig0020421:-132463 None:intergenic
CACTCCATATTCCACATATA+TGG 0.341388 tig0020421:-135839 None:intergenic
TTCGAGTGGCGCGGCTTCTA+AGG 0.349228 tig0020421:+132793 Msa1381100:CDS
TTGGAGCAGGCTAGGTTGAT+TGG 0.354782 tig0020421:+133076 Msa1381100:CDS
TGGACCATATATGTGGAATA+TGG 0.360777 tig0020421:+135835 Msa1381100:CDS
AGATTTCTCAAAACCTAAAC+TGG 0.364512 tig0020421:-135082 None:intergenic
CACTGCCTTGGCGACTGCCT+GGG 0.365784 tig0020421:-138367 None:intergenic
TTCCAGTACACTGAACAGTA+TGG 0.368353 tig0020421:+135778 Msa1381100:CDS
AGTCTCGGCCCTCAGCTTCC+TGG 0.381737 tig0020421:-140680 None:intergenic
ACTCTCTCAGTTGTAGCTTC+AGG 0.381950 tig0020421:-135189 None:intergenic
GAGGTTCGGTTGTGACTAAT+GGG 0.382870 tig0020421:+132855 Msa1381100:CDS
CCTAAATGGTGGCACCACTA+TGG 0.385593 tig0020421:+139207 Msa1381100:CDS
CCGGTAGACACGTACATAAT+GGG 0.390168 tig0020421:+134034 Msa1381100:CDS
CCCGGTAGACACGTACATAA+TGG 0.393705 tig0020421:+134033 Msa1381100:CDS
GGGTTTCTTCTTATTGCCAC+TGG 0.395972 tig0020421:+135323 Msa1381100:CDS
AGCAATGGTGGAATCCTAAA+TGG 0.396741 tig0020421:+139193 Msa1381100:CDS
AGAACATGTGAAGAGCTCTT+TGG 0.399675 tig0020421:+133676 Msa1381100:CDS
TCTTTCTTCAACGATTTCAT+TGG 0.401489 tig0020421:+132432 Msa1381100:CDS
TGGAGGCTCTTCTGGGCAAC+AGG 0.402163 tig0020421:+132949 Msa1381100:CDS
GTGTCTCGAATGGCCAGTTT+AGG 0.403170 tig0020421:+135069 Msa1381100:CDS
TAAAGCTGTTTCGAAACCTT+TGG 0.404005 tig0020421:+135690 Msa1381100:CDS
AGTTGTGTTATCCGCGTTTG+CGG 0.407797 tig0020421:+132521 Msa1381100:CDS
CATTGTATCAGAGAATTGTT+CGG 0.410677 tig0020421:+141025 Msa1381100:CDS
TGTTCTCAACGTTTGTGCTC+AGG 0.412316 tig0020421:+133783 Msa1381100:CDS
GAAGAAAGATGCAACGAAAT+CGG 0.412381 tig0020421:-132418 None:intergenic
TATAATTGGTCTGAGATTGA+TGG 0.416650 tig0020421:-132751 None:intergenic
CCCATTATGTACGTGTCTAC+CGG 0.420441 tig0020421:-134034 None:intergenic
CACGATGACCCTTCTTCCGC+TGG 0.421757 tig0020421:+140967 Msa1381100:CDS
TACGTGAACGGAATGATTAT+GGG 0.421911 tig0020421:+134071 Msa1381100:CDS
CCGCAATGGCTGACCTCCTC+GGG 0.422534 tig0020421:-133734 None:intergenic
GATTTCGCCGACGAGGTTGC+TGG 0.426671 tig0020421:+132486 Msa1381100:CDS
GCACAAACGTTGAGAACAAT+TGG 0.427366 tig0020421:-133778 None:intergenic
TTCGAGATCCGTCAAGAGAT+TGG 0.429020 tig0020421:+133585 Msa1381100:CDS
GAAGAGGGATTGGCACGAGC+AGG 0.429926 tig0020421:+133468 Msa1381100:CDS
TCCCATACTGTTCAGTGTAC+TGG 0.435879 tig0020421:-135780 None:intergenic
CTCATAAACCAATCTCTTGA+CGG 0.437075 tig0020421:-133593 None:intergenic
TCCGCAATGGCTGACCTCCT+CGG 0.438852 tig0020421:-133735 None:intergenic
CAATCTCAGACCAATTATAA+TGG 0.439816 tig0020421:+132755 Msa1381100:CDS
GAGGAGTAATGCCGATCAAT+TGG 0.441832 tig0020421:+132892 Msa1381100:CDS
AATCAAGAGCCTCTCGGCAT+TGG 0.441885 tig0020421:+133555 Msa1381100:CDS
GCAAATCCATGAGAGTTTAT+CGG 0.442296 tig0020421:-132193 None:intergenic
CTCTCCCTGTGCTCAGATGT+TGG 0.442836 tig0020421:+135389 Msa1381100:CDS
CAAAATTTAGGTTTAAATGA+TGG 0.442853 tig0020421:+132917 Msa1381100:CDS
GGCGCGGCTTCTAAGGCTGC+TGG 0.443701 tig0020421:+132800 Msa1381100:CDS
TGGAGCAGGCTAGGTTGATT+GGG 0.447080 tig0020421:+133077 Msa1381100:CDS
CTCGTATATGATCCTCCCTC+TGG 0.447960 tig0020421:-140746 None:intergenic
AAGGAACTGCAGGTTTCTCT+TGG 0.448978 tig0020421:-134683 None:intergenic
CACCGCTTCATCAAGAGGTT+CGG 0.449844 tig0020421:+132841 Msa1381100:CDS
GCATCAATGACCACAATCTC+AGG 0.453758 tig0020421:+138458 Msa1381100:CDS
TATATCTTTGCAGGTTCTAT+GGG 0.454250 tig0020421:+140909 Msa1381100:intron
GCTTAACTGCGATCGTTCAC+AGG 0.454263 tig0020421:+139305 Msa1381100:CDS
GCTCTTTCTGCCGCTTTAGG+TGG 0.455661 tig0020421:+138422 Msa1381100:CDS
CTCTTTCTGCCGCTTTAGGT+GGG 0.458204 tig0020421:+138423 Msa1381100:CDS
ATTGTATCAGAGAATTGTTC+GGG 0.461141 tig0020421:+141026 Msa1381100:CDS
AGCTGTACAAAAGGAACTGC+AGG 0.462251 tig0020421:-134693 None:intergenic
GAAGATCGAATATCTGAGAT+AGG 0.463015 tig0020421:+140657 Msa1381100:CDS
ATGGTCCATTTACAGCTTGA+AGG 0.464622 tig0020421:-135820 None:intergenic
GGCTCGCTCCTTAGTCCAGC+AGG 0.464714 tig0020421:-134011 None:intergenic
GCAACAGGTTACTTCCTTTG+AGG 0.464751 tig0020421:+132964 Msa1381100:CDS
ACGGAATGATTATGGGGAAC+AGG 0.465337 tig0020421:+134078 Msa1381100:CDS
GGTTTAAATGATGGTGGTCC+TGG 0.468814 tig0020421:+132926 Msa1381100:CDS
CACTCTCGAACATGGTTCCC+TGG 0.469413 tig0020421:-133958 None:intergenic
TGCAGATAAGGAAGAGGGAT+TGG 0.470835 tig0020421:+133458 Msa1381100:intron
CGTCAAGAGATTGGTTTATG+AGG 0.471272 tig0020421:+133594 Msa1381100:CDS
AAATGCTCCATGCACAAGCC+AGG 0.473324 tig0020421:+141071 Msa1381100:CDS
CAGCACTTAGTTCAGCAAAC+AGG 0.475423 tig0020421:-134728 None:intergenic
AGGTTGTTAGCTCAGTGAAA+TGG 0.475501 tig0020421:+138309 Msa1381100:intron
TATCGAATCCTGCTGGACTA+AGG 0.481881 tig0020421:+134003 Msa1381100:CDS
CTGGCATCAACGATCCTGCT+TGG 0.487316 tig0020421:+140986 Msa1381100:CDS
ACGCGAAACCCTAGGCGATC+CGG 0.489088 tig0020421:-132247 None:intergenic
CTTCCTATTTCGTCTTCGGA+TGG 0.489194 tig0020421:+132597 Msa1381100:CDS
ATAACGTTTAGCTGTACAAA+AGG 0.490385 tig0020421:-134702 None:intergenic
ATCAGAGAATTGTTCGGGAA+TGG 0.491560 tig0020421:+141031 Msa1381100:CDS
TGAAACATGGAGTAGCAACC+AGG 0.494592 tig0020421:+133940 Msa1381100:CDS
CCATTATGTACGTGTCTACC+GGG 0.497540 tig0020421:-134033 None:intergenic
TCGTTGATGCCAGCGGAAGA+AGG 0.502332 tig0020421:-140976 None:intergenic
ATCTCTCCGCCGGATCGCCT+AGG 0.503416 tig0020421:+132238 Msa1381100:CDS
TACTTCAAACGTGGAGCCAT+CGG 0.503493 tig0020421:+135664 Msa1381100:CDS
GAACAAGCTGCAGCAACTGC+AGG 0.503922 tig0020421:-135629 None:intergenic
AGTTTATCGGAGAATTGAGA+TGG 0.509244 tig0020421:-132180 None:intergenic
CGAAACAGCTTTAAAACCGA+TGG 0.509637 tig0020421:-135680 None:intergenic
TGGTCCATTTACAGCTTGAA+GGG 0.511633 tig0020421:-135819 None:intergenic
ACAGGATTCTGTTATTGCTA+GGG 0.511713 tig0020421:+132545 Msa1381100:CDS
AAATTCTAGACTCTACCTGC+AGG 0.511844 tig0020421:+135302 Msa1381100:intron
TTATTTGTTTACAGGGGTGA+AGG 0.513179 tig0020421:+139123 Msa1381100:intron
AACAGGATTCTGTTATTGCT+AGG 0.518506 tig0020421:+132544 Msa1381100:CDS
GTTAAACCTGAAGAAGGCCC+TGG 0.521295 tig0020421:-141089 None:intergenic
GCAGCAACTGCAGGGAGCAA+AGG 0.521637 tig0020421:-135620 None:intergenic
TGCCCAGAAGAGCCTCCACC+AGG 0.521778 tig0020421:-132944 None:intergenic
CAAAGCTGCACAATCTTCGT+CGG 0.521803 tig0020421:+132464 Msa1381100:CDS
AAATCGGCGTTGAACGGTTG+AGG 0.523225 tig0020421:-132402 None:intergenic
GTCAGATTATCGAATCCTGC+TGG 0.524694 tig0020421:+133996 Msa1381100:CDS
TCGAATATCTGAGATAGGCC+AGG 0.525978 tig0020421:+140662 Msa1381100:CDS
CTTTGTGACACTCTCGAACA+TGG 0.526246 tig0020421:-133966 None:intergenic
AAGAGGGATTGGCACGAGCA+GGG 0.527002 tig0020421:+133469 Msa1381100:CDS
CTGGACTAAGGAGCGAGCCC+CGG 0.527197 tig0020421:+134015 Msa1381100:CDS
AATGATGGTGGTCCTGGTGG+AGG 0.528136 tig0020421:+132932 Msa1381100:CDS
AGAGGGATTGGCACGAGCAG+GGG 0.528700 tig0020421:+133470 Msa1381100:CDS
CTGTAAATGGACCATATATG+TGG 0.529290 tig0020421:+135828 Msa1381100:CDS
TCCAGATAGCAAGCACGCCT+CGG 0.530219 tig0020421:-133641 None:intergenic
TTCCTTTGAGGAAGAGTCTG+TGG 0.531014 tig0020421:+132976 Msa1381100:CDS
CTTTGGTTCCTTGCTTCTTG+GGG 0.531215 tig0020421:+133693 Msa1381100:CDS
TAAAGTGATTGCTCATGTGT+TGG 0.536964 tig0020421:+133027 Msa1381100:CDS
GACGAGGTTGCTGGATTCAC+CGG 0.537863 tig0020421:+132495 Msa1381100:CDS
ATCATCCGCTTTAGCAGCAA+TGG 0.540991 tig0020421:+139178 Msa1381100:CDS
AAATAGCAACGAGTCTAAGC+AGG 0.542029 tig0020421:-140938 None:intergenic
AATTCTCCGATAAACTCTCA+TGG 0.543485 tig0020421:+132187 Msa1381100:CDS
AGGCGTGCTTGCTATCTGGA+TGG 0.545008 tig0020421:+133644 Msa1381100:CDS
GAAACGAGCGACGGCGGTAA+CGG 0.546526 tig0020421:-132283 None:intergenic
GTTGAACGGTTGAGGCCAAA+AGG 0.546971 tig0020421:-132394 None:intergenic
GATTGCTCATGTGTTGGAAA+AGG 0.547511 tig0020421:+133033 Msa1381100:CDS
GCGGAGAGATACTCCGGCGG+TGG 0.547790 tig0020421:-132225 None:intergenic
AAATCAGTTAAACCTGAAGA+AGG 0.547967 tig0020421:-141095 None:intergenic
CGTTGATGCCAGCGGAAGAA+GGG 0.548041 tig0020421:-140975 None:intergenic
TCTCTCCGCCGGATCGCCTA+GGG 0.549048 tig0020421:+132239 Msa1381100:CDS
TACCTTTAGAAAAGCAGACA+TGG 0.549665 tig0020421:-133116 None:intergenic
GCAACGAAATCGGCGTTGAA+CGG 0.550602 tig0020421:-132408 None:intergenic
CGCGGATAACACAACTTCAC+CGG 0.551193 tig0020421:-132514 None:intergenic
ACTTAGAGATAAGTTTCCAC+AGG 0.551293 tig0020421:+140794 Msa1381100:CDS
AACCGAACCTCTTGATGAAG+CGG 0.551858 tig0020421:-132843 None:intergenic
CTAAACCAACATCTGAGCAC+AGG 0.552736 tig0020421:-135394 None:intergenic
TTTATAGAAAGCTTAGAAGA+GGG 0.556093 tig0020421:+134792 Msa1381100:CDS
ACTCGGAGTCTCAATAAACT+AGG 0.556825 tig0020421:-134828 None:intergenic
TGCAGTCAACAAGTCTGAGC+TGG 0.559072 tig0020421:+134749 Msa1381100:CDS
ATCAACTCTCCCACCTAAAG+CGG 0.560159 tig0020421:-138432 None:intergenic
ACTGAACAGTATGGGAAGCA+TGG 0.560977 tig0020421:+135787 Msa1381100:CDS
CCAGGCAGTCGCCAAGGCAG+TGG 0.561284 tig0020421:+138368 Msa1381100:CDS
AGAAGGCCCTGGCTTGTGCA+TGG 0.562023 tig0020421:-141078 None:intergenic
CCCGAGGAGGTCAGCCATTG+CGG 0.562306 tig0020421:+133734 Msa1381100:CDS
CACAACCCAGGCAGTCGCCA+AGG 0.562722 tig0020421:+138362 Msa1381100:CDS
ATGCAATCCACCTGAGATTG+TGG 0.563784 tig0020421:-138468 None:intergenic
TATGAAAATCAAGAGCCTCT+CGG 0.564019 tig0020421:+133549 Msa1381100:CDS
TCGTATATGATCCTCCCTCT+GGG 0.565458 tig0020421:-140745 None:intergenic
GTCCACAGACTCTTCCTCAA+AGG 0.568589 tig0020421:-132978 None:intergenic
AATTTAGGTTTAAATGATGG+TGG 0.569117 tig0020421:+132920 Msa1381100:CDS
CCCTCCTGTACAAAAGACTC+AGG 0.570012 tig0020421:+135739 Msa1381100:CDS
TGGGATCAACTTACTAGTGG+AGG 0.572635 tig0020421:-135896 None:intergenic
CGGACTGTCGATGTCCAAGC+AGG 0.572808 tig0020421:-141000 None:intergenic
CTAGCCTGCTCCAAAAGCGC+GGG 0.574590 tig0020421:-133067 None:intergenic
CTGAACAGTATGGGAAGCAT+GGG 0.575310 tig0020421:+135788 Msa1381100:CDS
TTGAATAAACTCTCTAGCGT+GGG 0.576983 tig0020421:+135141 Msa1381100:CDS
GCTAGCACCGCTTCATCAAG+AGG 0.578187 tig0020421:+132836 Msa1381100:CDS
CCGCCGGAGTATCTCTCCGC+CGG 0.579076 tig0020421:+132228 Msa1381100:CDS
AGTTCTTGCAGATAAGGAAG+AGG 0.579108 tig0020421:+133452 Msa1381100:intron
AGAATCCTGTTCCGCAAACG+CGG 0.580545 tig0020421:-132532 None:intergenic
GTTAAGCACTGAAAGACAGC+TGG 0.582263 tig0020421:-139289 None:intergenic
TTAGCTGCCGAGTCTAAAAG+TGG 0.582759 tig0020421:+135413 Msa1381100:CDS
GGATTCGATAATCTGACAGC+TGG 0.582880 tig0020421:-133990 None:intergenic
TTCCACCATTGCTGCTAAAG+CGG 0.583715 tig0020421:-139183 None:intergenic
TCCAGTACACTGAACAGTAT+GGG 0.583916 tig0020421:+135779 Msa1381100:CDS
GATGGCTCCACGTTTGAAGT+AGG 0.585104 tig0020421:-135662 None:intergenic
AGCTGAGAACGCGAAACCCT+AGG 0.585255 tig0020421:-132255 None:intergenic
GATCCGGCGGAGAGATACTC+CGG 0.587432 tig0020421:-132231 None:intergenic
CTTAACTGCGATCGTTCACA+GGG 0.589968 tig0020421:+139306 Msa1381100:CDS
ATCCGCTTTAGCAGCAATGG+TGG 0.591609 tig0020421:+139181 Msa1381100:CDS
TGAGATAGGCCAGGAAGCTG+AGG 0.592126 tig0020421:+140671 Msa1381100:CDS
AACAAGCTGCAGCAACTGCA+GGG 0.592370 tig0020421:-135628 None:intergenic
GACTGATTTAGGTCGTAGAT+CGG 0.592590 tig0020421:-132328 None:intergenic
CTTGAATAAACTCTCTAGCG+TGG 0.594136 tig0020421:+135140 Msa1381100:CDS
TCTAGATGCAGTGTCTCGAA+TGG 0.595562 tig0020421:+135059 Msa1381100:CDS
AATGCTCCATGCACAAGCCA+GGG 0.597038 tig0020421:+141072 Msa1381100:CDS
AAAGAGCAACATAGAACCAA+AGG 0.597728 tig0020421:-135706 None:intergenic
AATTCTAGACTCTACCTGCA+GGG 0.597860 tig0020421:+135303 Msa1381100:intron
CCTAGCCTGCTCCAAAAGCG+CGG 0.601024 tig0020421:-133068 None:intergenic
AGGCCAAAAGGAGTGAGTAA+AGG 0.601532 tig0020421:-132382 None:intergenic
ACGTGAACGGAATGATTATG+GGG 0.602951 tig0020421:+134072 Msa1381100:CDS
TAGCTCAGTGAAATGGCTTG+AGG 0.602989 tig0020421:+138316 Msa1381100:CDS
GCATTGTAAGTATTGAGTCT+CGG 0.606832 tig0020421:-140695 None:intergenic
TTACTTAGCAGCCTGAAACA+TGG 0.608850 tig0020421:+133927 Msa1381100:intron
TTGTGCTACCCCAAGAAGCA+AGG 0.610649 tig0020421:-133701 None:intergenic
TTGCGATAAATGTCCACCGC+CGG 0.611784 tig0020421:+132212 Msa1381100:CDS
TAAAGGAATGCGGAATTGAA+CGG 0.613714 tig0020421:-132365 None:intergenic
TTTAGGTGGGAGAGTTGATG+TGG 0.614305 tig0020421:+138436 Msa1381100:CDS
GCAATAAGAAGAAACCCTGC+AGG 0.615319 tig0020421:-135317 None:intergenic
GATTGATGGTTTCCACTCAG+AGG 0.615506 tig0020421:-132737 None:intergenic
TTAAATGATGGTGGTCCTGG+TGG 0.616431 tig0020421:+132929 Msa1381100:CDS
GTTCTTGCAGATAAGGAAGA+GGG 0.619088 tig0020421:+133453 Msa1381100:intron
TGAAACAGCTGTGTCATGGA+TGG 0.622711 tig0020421:+139333 Msa1381100:CDS
CTGCCGAGTCTAAAAGTGGA+AGG 0.623028 tig0020421:+135417 Msa1381100:CDS
TGATGAAGCGGTGCTAGCAG+TGG 0.623055 tig0020421:-132831 None:intergenic
GAGATAGGCCAGGAAGCTGA+GGG 0.624943 tig0020421:+140672 Msa1381100:CDS
GCTCAGAGCTCGCCTCTGAG+TGG 0.626658 tig0020421:+132725 Msa1381100:intron
TGATTTAGGTCGTAGATCGG+TGG 0.626909 tig0020421:-132325 None:intergenic
AGCAGGATCGTTGATGCCAG+CGG 0.628271 tig0020421:-140983 None:intergenic
AGATAAGAAACGAGCGACGG+CGG 0.628364 tig0020421:-132289 None:intergenic
ACTTCTAGCAGTATCCATAG+TGG 0.629803 tig0020421:-139221 None:intergenic
TAAACCAACATCTGAGCACA+GGG 0.629907 tig0020421:-135393 None:intergenic
CGAATGAGCAAAATCCGCAA+TGG 0.632134 tig0020421:-133748 None:intergenic
GACTAGTAATTCGAGTGGCG+CGG 0.632291 tig0020421:+132784 Msa1381100:CDS
CAATTCTCTGATACAATGAA+CGG 0.635148 tig0020421:-141020 None:intergenic
AATCAAAAGTCTGTCCCAGA+GGG 0.636221 tig0020421:+140731 Msa1381100:CDS
CTAAATGCTCTGCACAACCC+AGG 0.636958 tig0020421:+138350 Msa1381100:CDS
CAAAAGTCTGTCCCAGAGGG+AGG 0.639822 tig0020421:+140734 Msa1381100:CDS
CGTGCTTGCTATCTGGATGG+AGG 0.641971 tig0020421:+133647 Msa1381100:CDS
GGTTCGGTTGTGACTAATGG+GGG 0.642464 tig0020421:+132857 Msa1381100:CDS
TAGCTACAAGCATACGTGAA+CGG 0.644485 tig0020421:+134059 Msa1381100:CDS
AGCAGTTCTCTGTGCAAGAG+CGG 0.644653 tig0020421:-138402 None:intergenic
TCATCAAAACCACTGTCTCA+CGG 0.647351 tig0020421:-135107 None:intergenic
CATATATGTGGAATATGGAG+TGG 0.650690 tig0020421:+135840 Msa1381100:CDS
GAAATCTTACCGTGAGACAG+TGG 0.650766 tig0020421:+135098 Msa1381100:CDS
GCTGTTAATCAAATTGCACA+AGG 0.659930 tig0020421:+135869 Msa1381100:CDS
CGAAACCCTAGGCGATCCGG+CGG 0.660530 tig0020421:-132244 None:intergenic
TTCGTCGGATTTCGCCGACG+AGG 0.664762 tig0020421:+132479 Msa1381100:CDS
AATGGTGGAATCCTAAATGG+TGG 0.665554 tig0020421:+139196 Msa1381100:CDS
GCACAAATTGCTATTGCCCG+AGG 0.667643 tig0020421:+133718 Msa1381100:CDS
CAAATTGCTATTGCCCGAGG+AGG 0.673919 tig0020421:+133721 Msa1381100:CDS
AATATTGATAGATGCAGCCG+AGG 0.674068 tig0020421:+133624 Msa1381100:CDS
CGGTAGACACGTACATAATG+GGG 0.680504 tig0020421:+134035 Msa1381100:CDS
AGCACAGGGAGAGTAATCGA+TGG 0.682658 tig0020421:-135379 None:intergenic
CATGTTCGAGAGTGTCACAA+AGG 0.683497 tig0020421:+133967 Msa1381100:CDS
AAGGAGTGAGTAAAGGAATG+CGG 0.683504 tig0020421:-132375 None:intergenic
GGTGAATCCAGCAACCTCGT+CGG 0.684528 tig0020421:-132493 None:intergenic
GCGCCACTCGAATTACTAGT+CGG 0.688126 tig0020421:-132782 None:intergenic
AGGTTCGGTTGTGACTAATG+GGG 0.689127 tig0020421:+132856 Msa1381100:CDS
TAATCAAAAGTCTGTCCCAG+AGG 0.693777 tig0020421:+140730 Msa1381100:CDS
GAAACATGGAGTAGCAACCA+GGG 0.693876 tig0020421:+133941 Msa1381100:CDS
TCTATCAGTAGTAAGACCAG+TGG 0.694696 tig0020421:-135339 None:intergenic
CTGTTAATCAAATTGCACAA+GGG 0.699548 tig0020421:+135870 Msa1381100:CDS
AGTCCGACTAGTAATTCGAG+TGG 0.703951 tig0020421:+132779 Msa1381100:CDS
GTTAGATAAGAAACGAGCGA+CGG 0.720253 tig0020421:-132292 None:intergenic
AATCAGAATCCAATGCCGAG+AGG 0.732975 tig0020421:-133564 None:intergenic
CATTATGTACGTGTCTACCG+GGG 0.742433 tig0020421:-134032 None:intergenic
CCGGCGGAGAGATACTCCGG+CGG 0.750280 tig0020421:-132228 None:intergenic
AGGAATGCGGAATTGAACGG+AGG 0.756768 tig0020421:-132362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATATAGAAGAAAAA+TGG - tig0020421:137161-137180 None:intergenic 10.0%
!! TCTATATAATAATAACTAAA+AGG + tig0020421:137168-137187 Msa1381100:intron 10.0%
!!! CTTTTAAATAATTTGTAATT+GGG - tig0020421:137585-137604 None:intergenic 10.0%
!!! ACTTTTAAATAATTTGTAAT+TGG - tig0020421:137586-137605 None:intergenic 10.0%
!! AACTAAAAAAGTTTATAATT+GGG - tig0020421:137738-137757 None:intergenic 10.0%
!! AAACTAAAAAAGTTTATAAT+TGG - tig0020421:137739-137758 None:intergenic 10.0%
!! TTATTGTTTATTATGAATAA+AGG + tig0020421:139729-139748 Msa1381100:intron 10.0%
!!! TAATATAATAAAAAGCATAA+CGG - tig0020421:139932-139951 None:intergenic 10.0%
!! ATATGGAAATGTAAAAAAAA+TGG - tig0020421:134420-134439 None:intergenic 15.0%
!! AAAAAATATGTCAACTATTT+CGG - tig0020421:134579-134598 None:intergenic 15.0%
!! ATTGGAGTAAAAAATTATAT+TGG + tig0020421:136183-136202 Msa1381100:intron 15.0%
!! TTGGAGTAAAAAATTATATT+GGG + tig0020421:136184-136203 Msa1381100:intron 15.0%
!!! TGAATCATAAAAATACTTTT+AGG - tig0020421:136390-136409 None:intergenic 15.0%
!! TAATAAGAATTGATATAGAA+TGG + tig0020421:136623-136642 Msa1381100:intron 15.0%
!! TATAATAATAACTAAAAGGT+TGG + tig0020421:137172-137191 Msa1381100:intron 15.0%
!!! AGAAACTATTTTCATAATAA+TGG - tig0020421:137414-137433 None:intergenic 15.0%
!!! ACTATTTGAAGATTTTAAAT+AGG + tig0020421:137436-137455 Msa1381100:intron 15.0%
!!! ACAAATTATTGATGATTTTA+TGG - tig0020421:137492-137511 None:intergenic 15.0%
!!! ATCATCAATAATTTGTAATT+AGG + tig0020421:137496-137515 Msa1381100:intron 15.0%
!! CTGATAAAAAAAAATAGTTA+AGG - tig0020421:137524-137543 None:intergenic 15.0%
!!! CTTAACTATTTTTTTTTATC+AGG + tig0020421:137522-137541 Msa1381100:intron 15.0%
!!! CTTTTAAATAATATGCAATT+AGG - tig0020421:137646-137665 None:intergenic 15.0%
!!! TATTATTACTTTTAAAATCC+TGG + tig0020421:137984-138003 Msa1381100:intron 15.0%
!!! ATTATTACTTTTAAAATCCT+GGG + tig0020421:137985-138004 Msa1381100:intron 15.0%
!! TTAAAGTTTACTTTAATCAT+CGG - tig0020421:138189-138208 None:intergenic 15.0%
!! TAGTAGAATTAATAGAATAT+TGG + tig0020421:138902-138921 Msa1381100:intron 15.0%
!!! GCATTTTTTATATAAATTTG+AGG + tig0020421:139549-139568 Msa1381100:intron 15.0%
!!! GTATATTTTAGAAACTAATT+TGG + tig0020421:140304-140323 Msa1381100:intron 15.0%
!! TATAGAATAAACTCTTAAAT+TGG - tig0020421:140350-140369 None:intergenic 15.0%
!!! CAAAATTTAGGTTTAAATGA+TGG + tig0020421:132917-132936 Msa1381100:CDS 20.0%
!!! TTAAAGTTTAGGTTTATTTG+AGG + tig0020421:133404-133423 Msa1381100:intron 20.0%
!! GTTTGAAAACAAAATGTTAA+TGG - tig0020421:133840-133859 None:intergenic 20.0%
!! ATGAAAATGATGAAATTAAG+GGG - tig0020421:134493-134512 None:intergenic 20.0%
!! GATGAAAATGATGAAATTAA+GGG - tig0020421:134494-134513 None:intergenic 20.0%
!!! CTTAATTTCATCATTTTCAT+CGG + tig0020421:134493-134512 Msa1381100:intron 20.0%
!! GGTAATGATATCTATTTATA+CGG + tig0020421:134514-134533 Msa1381100:intron 20.0%
!! TGGAGTAAAAAATTATATTG+GGG + tig0020421:136185-136204 Msa1381100:intron 20.0%
!!! TTTTATGATTCATCATTACT+TGG + tig0020421:136398-136417 Msa1381100:intron 20.0%
!! AGAAATCATAATTCTTTAGT+TGG - tig0020421:136799-136818 None:intergenic 20.0%
!!! TACTTATTCTTTTTTAGTAG+AGG + tig0020421:136993-137012 Msa1381100:intron 20.0%
!!! ATATTTGCATTCTAAAATCA+AGG - tig0020421:137110-137129 None:intergenic 20.0%
!! AATTAAGTCTTTGAATTTAG+AGG + tig0020421:137559-137578 Msa1381100:intron 20.0%
!! GCATATTATTTAAAAGTTCA+AGG + tig0020421:137650-137669 Msa1381100:intron 20.0%
!!! ATCATTGACTAGTTTATTTA+TGG + tig0020421:137711-137730 Msa1381100:intron 20.0%
!!! TTTTAATAGTTTGATAACTC+TGG - tig0020421:137795-137814 None:intergenic 20.0%
!! CAGGTTAAAAATAATATCAT+AGG - tig0020421:138106-138125 None:intergenic 20.0%
!!! AAGACAAATGATTATTTCTT+AGG + tig0020421:138755-138774 Msa1381100:intron 20.0%
!! AATTTAATGTAGAAAACAAG+GGG - tig0020421:138986-139005 None:intergenic 20.0%
!! GAATTTAATGTAGAAAACAA+GGG - tig0020421:138987-139006 None:intergenic 20.0%
!! AGAATTTAATGTAGAAAACA+AGG - tig0020421:138988-139007 None:intergenic 20.0%
!! TTTCTCATTATTTGTTTACA+GGG + tig0020421:139116-139135 Msa1381100:intron 20.0%
!! TCCTTTATGTATAATCTTAA+AGG + tig0020421:139462-139481 Msa1381100:intron 20.0%
!! CCTTTATGTATAATCTTAAA+GGG + tig0020421:139463-139482 Msa1381100:intron 20.0%
!! TTGTTTACTATTCATCTAAA+AGG + tig0020421:139611-139630 Msa1381100:intron 20.0%
!! TTTATTATGAATAAAGGCAA+GGG + tig0020421:139735-139754 Msa1381100:intron 20.0%
!! TGATGCATAAATAAAATCAA+CGG - tig0020421:139768-139787 None:intergenic 20.0%
!!! TTGATTTTATTTATGCATCA+AGG + tig0020421:139768-139787 Msa1381100:intron 20.0%
!!! CTTTTTGTTAAAAAAGTTCT+AGG - tig0020421:140113-140132 None:intergenic 20.0%
!!! AATTTGGTGACAAAAATATT+TGG + tig0020421:140320-140339 Msa1381100:intron 20.0%
!!! AGTTTGATTTTATTATAGTG+GGG - tig0020421:140434-140453 None:intergenic 20.0%
!!! CAGTTTGATTTTATTATAGT+GGG - tig0020421:140435-140454 None:intergenic 20.0%
!!! TCAGTTTGATTTTATTATAG+TGG - tig0020421:140436-140455 None:intergenic 20.0%
!!! TCCTATATTTTTTCTTTTCT+TGG + tig0020421:140858-140877 Msa1381100:intron 20.0%
!! TCCAAGAAAAGAAAAAATAT+AGG - tig0020421:140862-140881 None:intergenic 20.0%
! TTGTTTGATTGAACAATATG+CGG + tig0020421:132635-132654 Msa1381100:intron 25.0%
! AGAAGAATTATCCAAATTTC+CGG - tig0020421:132705-132724 None:intergenic 25.0%
!! AATTTAGGTTTAAATGATGG+TGG + tig0020421:132920-132939 Msa1381100:CDS 25.0%
! AGAAAATAAATACAAACCGA+AGG - tig0020421:133161-133180 None:intergenic 25.0%
!! AGCTTTATAAACTGACAATT+TGG - tig0020421:133521-133540 None:intergenic 25.0%
! TCATGAAGTTATATGTCAAT+TGG - tig0020421:133870-133889 None:intergenic 25.0%
! AAACAAAATACAGTACAACA+TGG - tig0020421:134174-134193 None:intergenic 25.0%
! TTACATTTCCATATACTTTG+TGG + tig0020421:134426-134445 Msa1381100:intron 25.0%
! CGATGAAAATGATGAAATTA+AGG - tig0020421:134495-134514 None:intergenic 25.0%
! TCTAAGCTTTCTATAAAAAG+AGG - tig0020421:134789-134808 None:intergenic 25.0%
!! TTTTATAGAAAGCTTAGAAG+AGG + tig0020421:134791-134810 Msa1381100:CDS 25.0%
! TTTATAGAAAGCTTAGAAGA+GGG + tig0020421:134792-134811 Msa1381100:CDS 25.0%
!! CATGTTCAATTTGATTAGTT+TGG + tig0020421:135245-135264 Msa1381100:intron 25.0%
!!! AGTTTGGTGTAAATATCAAA+TGG + tig0020421:135261-135280 Msa1381100:intron 25.0%
! AAGGAAATGAAGTTGAATAA+AGG - tig0020421:135528-135547 None:intergenic 25.0%
! TCCCAAAATATACTAGTTAT+CGG + tig0020421:135914-135933 Msa1381100:intron 25.0%
!!! TGGAAAGAATTTAGAGTTTT+GGG + tig0020421:136099-136118 Msa1381100:intron 25.0%
! GGAGTAAAAAATTATATTGG+GGG + tig0020421:136186-136205 Msa1381100:intron 25.0%
!!! AATACTTTTAGGCTTTGTTT+GGG - tig0020421:136379-136398 None:intergenic 25.0%
!!! AAATACTTTTAGGCTTTGTT+TGG - tig0020421:136380-136399 None:intergenic 25.0%
! AATACCATTTAGCTATCTAT+CGG + tig0020421:136430-136449 Msa1381100:intron 25.0%
! AATCATAGTAAAAGTAAACG+TGG - tig0020421:136464-136483 None:intergenic 25.0%
! ATTTGTGTATCAGTATTACA+AGG - tig0020421:136538-136557 None:intergenic 25.0%
! CTAAAGAATTATGATTTCTG+TGG + tig0020421:136800-136819 Msa1381100:intron 25.0%
!!! TTATTCTTTTTTAGTAGAGG+TGG + tig0020421:136996-137015 Msa1381100:intron 25.0%
!!! TATTCTTTTTTAGTAGAGGT+GGG + tig0020421:136997-137016 Msa1381100:intron 25.0%
! TCTGTTGAATGCTTTAATAA+AGG + tig0020421:137027-137046 Msa1381100:intron 25.0%
! TTGAACTATATTCGTAATGA+AGG + tig0020421:137066-137085 Msa1381100:intron 25.0%
! ATATATTTATTCTGCAACTG+CGG + tig0020421:137195-137214 Msa1381100:intron 25.0%
!!! TGCACTATTTTTATTGATTC+TGG + tig0020421:137300-137319 Msa1381100:intron 25.0%
!!! TATTTTTATTGATTCTGGCA+TGG + tig0020421:137305-137324 Msa1381100:intron 25.0%
! AACTTGCAAAGTTTGTAATT+GGG + tig0020421:137465-137484 Msa1381100:intron 25.0%
! TACAAATTGTTTGAAAGTTC+AGG + tig0020421:137618-137637 Msa1381100:intron 25.0%
! ACAAATTGTTTGAAAGTTCA+GGG + tig0020421:137619-137638 Msa1381100:intron 25.0%
! TCATGTTAAATATCCTATCA+GGG - tig0020421:137867-137886 None:intergenic 25.0%
! GAAGATGTTAAATATGATTG+TGG + tig0020421:138007-138026 Msa1381100:intron 25.0%
! TCATAACTCACTGTTAAAAT+GGG - tig0020421:138067-138086 None:intergenic 25.0%
! TCGTAGAAATATAAGGAATA+TGG - tig0020421:138497-138516 None:intergenic 25.0%
!!! GTTTTAACACTTAACACATT+TGG + tig0020421:138659-138678 Msa1381100:intron 25.0%
!!! AGTGTATACTTAGTTTTTTC+TGG + tig0020421:138823-138842 Msa1381100:intron 25.0%
! AAAATTAACAGGAGTTAAGA+AGG - tig0020421:139057-139076 None:intergenic 25.0%
! CTTTCTCATTATTTGTTTAC+AGG + tig0020421:139115-139134 Msa1381100:intron 25.0%
! TTCTCATTATTTGTTTACAG+GGG + tig0020421:139117-139136 Msa1381100:intron 25.0%
!!! CCCTTTAAGATTATACATAA+AGG - tig0020421:139466-139485 None:intergenic 25.0%
! AAAATGCTACTAAGAAAACA+TGG - tig0020421:139536-139555 None:intergenic 25.0%
!!! TAATTGTTTTGCATATGCAT+AGG - tig0020421:139659-139678 None:intergenic 25.0%
! GTTTATTATGAATAAAGGCA+AGG + tig0020421:139734-139753 Msa1381100:intron 25.0%
! TTATTATGAATAAAGGCAAG+GGG + tig0020421:139736-139755 Msa1381100:intron 25.0%
! ATAAATAAAATCAACGGTTC+AGG - tig0020421:139762-139781 None:intergenic 25.0%
! ACAGATTGATTAAATTGTGA+AGG - tig0020421:139828-139847 None:intergenic 25.0%
! AACTTAAATTAGAGTGAAGA+GGG - tig0020421:139990-140009 None:intergenic 25.0%
! AAACTTAAATTAGAGTGAAG+AGG - tig0020421:139991-140010 None:intergenic 25.0%
! AAACACTCACAAAAAAGAAA+AGG - tig0020421:140033-140052 None:intergenic 25.0%
!!! GTTAAAAAAGTTCTAGGTAT+TGG - tig0020421:140107-140126 None:intergenic 25.0%
!!! GTTTGATTTTATTATAGTGG+GGG - tig0020421:140433-140452 None:intergenic 25.0%
! TGTTTATGTACATCAACAAA+TGG + tig0020421:140467-140486 Msa1381100:intron 25.0%
! TCTATATATGCATAACTGAT+TGG + tig0020421:140623-140642 Msa1381100:intron 25.0%
!!! ATACACATTTTTTTTACCTG+TGG - tig0020421:140813-140832 None:intergenic 25.0%
! GATTAAAACTATATCTTTGC+AGG + tig0020421:140900-140919 Msa1381100:intron 25.0%
TCTTTCTTCAACGATTTCAT+TGG + tig0020421:132432-132451 Msa1381100:CDS 30.0%
! TTTTCTTCCTATTTCGTCTT+CGG + tig0020421:132593-132612 Msa1381100:CDS 30.0%
! TATAATTGGTCTGAGATTGA+TGG - tig0020421:132754-132773 None:intergenic 30.0%
CAATCTCAGACCAATTATAA+TGG + tig0020421:132755-132774 Msa1381100:CDS 30.0%
! TAAATTTTGCGCCAATTGAT+CGG - tig0020421:132906-132925 None:intergenic 30.0%
!!! ATTTTTTCGTACAATGCCTT+CGG + tig0020421:133142-133161 Msa1381100:intron 30.0%
CAAATACAGCTATGCTATAA+CGG + tig0020421:133362-133381 Msa1381100:intron 30.0%
CTAAACTTTAACCACTATAG+TGG - tig0020421:133395-133414 None:intergenic 30.0%
CACTATAGTGGTTAAAGTTT+AGG + tig0020421:133393-133412 Msa1381100:intron 30.0%
TATCTATTTATACGGTCAGT+AGG + tig0020421:134522-134541 Msa1381100:intron 30.0%
AGAAAAAATGCTGAAGAAAC+AGG - tig0020421:134552-134571 None:intergenic 30.0%
ATAACGTTTAGCTGTACAAA+AGG - tig0020421:134705-134724 None:intergenic 30.0%
TGAATACAAAGTTCCATACT+CGG - tig0020421:134848-134867 None:intergenic 30.0%
TTGTACAGGAATTACTCTTA+CGG - tig0020421:134932-134951 None:intergenic 30.0%
AGATTTCTCAAAACCTAAAC+TGG - tig0020421:135085-135104 None:intergenic 30.0%
!! GTTTTGCTGAGAATTTTAGT+AGG + tig0020421:135502-135521 Msa1381100:intron 30.0%
ATTCAACTTCATTTCCTTGA+TGG + tig0020421:135530-135549 Msa1381100:intron 30.0%
CTGTTAATCAAATTGCACAA+GGG + tig0020421:135870-135889 Msa1381100:CDS 30.0%
! CCCGATAACTAGTATATTTT+GGG - tig0020421:135918-135937 None:intergenic 30.0%
CCCAAAATATACTAGTTATC+GGG + tig0020421:135915-135934 Msa1381100:intron 30.0%
CCAAAATATACTAGTTATCG+GGG + tig0020421:135916-135935 Msa1381100:intron 30.0%
!!! CATTTGTTGCTTTGACTTTT+GGG + tig0020421:135999-136018 Msa1381100:intron 30.0%
!! GTGGAAAGAATTTAGAGTTT+TGG + tig0020421:136098-136117 Msa1381100:intron 30.0%
!!! AAAGAATTTAGAGTTTTGGG+AGG + tig0020421:136102-136121 Msa1381100:intron 30.0%
!!! AAGAATTTAGAGTTTTGGGA+GGG + tig0020421:136103-136122 Msa1381100:intron 30.0%
AATACAAAATCCCCCTAATT+TGG + tig0020421:136156-136175 Msa1381100:intron 30.0%
ATACAAAATCCCCCTAATTT+GGG + tig0020421:136157-136176 Msa1381100:intron 30.0%
GTAAAAAATTATATTGGGGG+AGG + tig0020421:136189-136208 Msa1381100:intron 30.0%
ATACCATTTAGCTATCTATC+GGG + tig0020421:136431-136450 Msa1381100:intron 30.0%
! TATTTAAAGCCTCATGCTTA+TGG + tig0020421:136501-136520 Msa1381100:intron 30.0%
! ATTAATAATCCCAGCTTGTT+TGG + tig0020421:136680-136699 Msa1381100:intron 30.0%
ATGAAACGATGATTTCATTC+TGG - tig0020421:136755-136774 None:intergenic 30.0%
AGCATTCAACAAAAATGAGA+TGG - tig0020421:136932-136951 None:intergenic 30.0%
TTTGTTGAATGCTTTAGTTG+AGG + tig0020421:136939-136958 Msa1381100:intron 30.0%
GTTGAATGCTTTAATAAAGG+TGG + tig0020421:137030-137049 Msa1381100:intron 30.0%
! TAATAAAGGTGGACTTCATA+AGG + tig0020421:137041-137060 Msa1381100:intron 30.0%
GAACTTGCAAAGTTTGTAAT+TGG + tig0020421:137464-137483 Msa1381100:intron 30.0%
!!! CAGATTAATTTTTTTGCCTC+CGG + tig0020421:137675-137694 Msa1381100:intron 30.0%
!!! AGATTAATTTTTTTGCCTCC+GGG + tig0020421:137676-137695 Msa1381100:intron 30.0%
! TAATAGTTTGATAACTCTGG+AGG - tig0020421:137792-137811 None:intergenic 30.0%
CATGTTAAATATCCTATCAG+GGG - tig0020421:137866-137885 None:intergenic 30.0%
CTCATGTTAAATATCCTATC+AGG - tig0020421:137868-137887 None:intergenic 30.0%
GATAGGATATTTAACATGAG+AGG + tig0020421:137868-137887 Msa1381100:intron 30.0%
!! CAGATCTTTGATTTTACCAT+TGG - tig0020421:137894-137913 None:intergenic 30.0%
ATCATATTTAACATCTTCCC+AGG - tig0020421:138005-138024 None:intergenic 30.0%
CTCATAACTCACTGTTAAAA+TGG - tig0020421:138068-138087 None:intergenic 30.0%
AGAATGCAACAAAACTATAC+AGG - tig0020421:138125-138144 None:intergenic 30.0%
GACAGTTTCGTAGAAATATA+AGG - tig0020421:138504-138523 None:intergenic 30.0%
! ATGCTATGAACAAGTTGAAT+GGG - tig0020421:138716-138735 None:intergenic 30.0%
! AATGCTATGAACAAGTTGAA+TGG - tig0020421:138717-138736 None:intergenic 30.0%
!! TTTGTCTTACTGCTTGTTAT+TGG - tig0020421:138743-138762 None:intergenic 30.0%
! TTATTTCTTAGGTGACATGA+TGG + tig0020421:138766-138785 Msa1381100:intron 30.0%
GTGATCAATGTCATATTCTA+TGG + tig0020421:138799-138818 Msa1381100:intron 30.0%
GTATAATCTTAAAGGGTTGT+AGG + tig0020421:139470-139489 Msa1381100:intron 30.0%
GGTATCGTAAGAAAAAAACT+TGG - tig0020421:139515-139534 None:intergenic 30.0%
GGAACAAGTACAAATTTCAA+AGG - tig0020421:139911-139930 None:intergenic 30.0%
! TTGGTGACAAAAATATTTGG+AGG + tig0020421:140323-140342 Msa1381100:intron 30.0%
!!! TATGCCGTTGACTTTTTTAA+AGG + tig0020421:140575-140594 Msa1381100:intron 30.0%
! TCAGCCTTTAAAAAAGTCAA+CGG - tig0020421:140582-140601 None:intergenic 30.0%
AGAGTGACACAAATAACATA+CGG - tig0020421:140606-140625 None:intergenic 30.0%
GAAAAAATATAGGAGACACT+GGG - tig0020421:140852-140871 None:intergenic 30.0%
AGAAAAAATATAGGAGACAC+TGG - tig0020421:140853-140872 None:intergenic 30.0%
TATATCTTTGCAGGTTCTAT+GGG + tig0020421:140909-140928 Msa1381100:intron 30.0%
CAATTCTCTGATACAATGAA+CGG - tig0020421:141023-141042 None:intergenic 30.0%
CATTGTATCAGAGAATTGTT+CGG + tig0020421:141025-141044 Msa1381100:CDS 30.0%
ATTGTATCAGAGAATTGTTC+GGG + tig0020421:141026-141045 Msa1381100:CDS 30.0%
AGTTTATCGGAGAATTGAGA+TGG - tig0020421:132183-132202 None:intergenic 35.0%
AATTCTCCGATAAACTCTCA+TGG + tig0020421:132187-132206 Msa1381100:CDS 35.0%
GCAAATCCATGAGAGTTTAT+CGG - tig0020421:132196-132215 None:intergenic 35.0%
TAAAGGAATGCGGAATTGAA+CGG - tig0020421:132368-132387 None:intergenic 35.0%
! ATTCCTTTACTCACTCCTTT+TGG + tig0020421:132379-132398 Msa1381100:CDS 35.0%
GAAGAAAGATGCAACGAAAT+CGG - tig0020421:132421-132440 None:intergenic 35.0%
AACAGGATTCTGTTATTGCT+AGG + tig0020421:132544-132563 Msa1381100:CDS 35.0%
ACAGGATTCTGTTATTGCTA+GGG + tig0020421:132545-132564 Msa1381100:CDS 35.0%
GTCTTCGGATGGAAATAAAT+TGG + tig0020421:132608-132627 Msa1381100:CDS 35.0%
AGTCGGACTACCATTATAAT+TGG - tig0020421:132768-132787 None:intergenic 35.0%
GATCAATTGGCGCAAAATTT+AGG + tig0020421:132905-132924 Msa1381100:CDS 35.0%
TAAAGTGATTGCTCATGTGT+TGG + tig0020421:133027-133046 Msa1381100:CDS 35.0%
!! ATCCATGTCTGCTTTTCTAA+AGG + tig0020421:133114-133133 Msa1381100:CDS 35.0%
! TACCTTTAGAAAAGCAGACA+TGG - tig0020421:133119-133138 None:intergenic 35.0%
TTCTCTGTTATGATTCGTCA+TGG + tig0020421:133177-133196 Msa1381100:intron 35.0%
ATGGTTTACACTGTTGAATG+TGG + tig0020421:133196-133215 Msa1381100:intron 35.0%
ACACTGTTGAATGTGGATAA+TGG + tig0020421:133203-133222 Msa1381100:intron 35.0%
TTATCAAATAGCCGCTATAG+TGG - tig0020421:133298-133317 None:intergenic 35.0%
TTGTACCAAATAGCGTATTG+CGG + tig0020421:133322-133341 Msa1381100:intron 35.0%
CGTTATAGCATAGCTGTATT+TGG - tig0020421:133364-133383 None:intergenic 35.0%
TATGAAAATCAAGAGCCTCT+CGG + tig0020421:133549-133568 Msa1381100:CDS 35.0%
CTCATAAACCAATCTCTTGA+CGG - tig0020421:133596-133615 None:intergenic 35.0%
!!! CGTTGAGAACAATTGGTTTT+AGG - tig0020421:133774-133793 None:intergenic 35.0%
ATACGTGAACGGAATGATTA+TGG + tig0020421:134070-134089 Msa1381100:CDS 35.0%
TACGTGAACGGAATGATTAT+GGG + tig0020421:134071-134090 Msa1381100:CDS 35.0%
!!! TAATTTTTTGTGCATCCACG+AGG + tig0020421:134110-134129 Msa1381100:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + tig0020421:134314-134333 Msa1381100:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - tig0020421:134319-134338 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + tig0020421:134319-134338 Msa1381100:intron 35.0%
CTGTGTACAATCTACCAAAA+TGG + tig0020421:134342-134361 Msa1381100:intron 35.0%
TGTACAATCTACCAAAATGG+TGG + tig0020421:134345-134364 Msa1381100:intron 35.0%
GTACAATCTACCAAAATGGT+GGG + tig0020421:134346-134365 Msa1381100:intron 35.0%
ACTGAAGTCCACAAAGTATA+TGG - tig0020421:134437-134456 None:intergenic 35.0%
GCTCCAATCTATTAATCCTT+TGG + tig0020421:134989-135008 Msa1381100:intron 35.0%
CCAATCTATTAATCCTTTGG+CGG + tig0020421:134992-135011 Msa1381100:intron 35.0%
TTGAATAAACTCTCTAGCGT+GGG + tig0020421:135141-135160 Msa1381100:CDS 35.0%
!! ATACCTTCCACTTTTAGACT+CGG - tig0020421:135423-135442 None:intergenic 35.0%
ATGTGCTCAGCGTAAAAAAT+AGG - tig0020421:135447-135466 None:intergenic 35.0%
TCAGAAAACATGATCCATCA+AGG - tig0020421:135547-135566 None:intergenic 35.0%
! TTTTGATCCTACTTCAAACG+TGG + tig0020421:135655-135674 Msa1381100:CDS 35.0%
! TAAAGCTGTTTCGAAACCTT+TGG + tig0020421:135690-135709 Msa1381100:CDS 35.0%
AAAGAGCAACATAGAACCAA+AGG - tig0020421:135709-135728 None:intergenic 35.0%
!! TGGTTCTATGTTGCTCTTTT+TGG + tig0020421:135710-135729 Msa1381100:CDS 35.0%
CTGTAAATGGACCATATATG+TGG + tig0020421:135828-135847 Msa1381100:CDS 35.0%
TGGACCATATATGTGGAATA+TGG + tig0020421:135835-135854 Msa1381100:CDS 35.0%
CACTCCATATTCCACATATA+TGG - tig0020421:135842-135861 None:intergenic 35.0%
CATATATGTGGAATATGGAG+TGG + tig0020421:135840-135859 Msa1381100:CDS 35.0%
GCTGTTAATCAAATTGCACA+AGG + tig0020421:135869-135888 Msa1381100:CDS 35.0%
!!! TTTTGGGATCAACTTACTAG+TGG - tig0020421:135902-135921 None:intergenic 35.0%
! CCCCGATAACTAGTATATTT+TGG - tig0020421:135919-135938 None:intergenic 35.0%
TATCGGGGAAAGAATTCAAT+TGG + tig0020421:135931-135950 Msa1381100:intron 35.0%
!!! GCATTTGTTGCTTTGACTTT+TGG + tig0020421:135998-136017 Msa1381100:intron 35.0%
!!! TTTTGGGTTGTTTTTGTCGT+AGG + tig0020421:136015-136034 Msa1381100:intron 35.0%
!!! AGAATTTAGAGTTTTGGGAG+GGG + tig0020421:136104-136123 Msa1381100:intron 35.0%
TACAAAATCCCCCTAATTTG+GGG + tig0020421:136158-136177 Msa1381100:intron 35.0%
CAAGACTTAGAGTAAGAGAA+GGG + tig0020421:136575-136594 Msa1381100:intron 35.0%
GGAGTCATCATTATAAGACA+AGG + tig0020421:136644-136663 Msa1381100:intron 35.0%
GAATATTTATTCCCTCCTAG+AGG - tig0020421:136720-136739 None:intergenic 35.0%
GATGATTTCATTCTGGTGTT+TGG - tig0020421:136748-136767 None:intergenic 35.0%
!!! TTTTATTGATTCTGGCATGG+TGG + tig0020421:137308-137327 Msa1381100:intron 35.0%
! AATGATTTGCACTTAGATCC+CGG - tig0020421:137697-137716 None:intergenic 35.0%
TGGAGGTCTCTCAATTATAT+GGG - tig0020421:137775-137794 None:intergenic 35.0%
TGTTAAAATTTGCCCCTGAT+AGG + tig0020421:137851-137870 Msa1381100:intron 35.0%
TATTTAACATGAGAGGCCAA+TGG + tig0020421:137875-137894 Msa1381100:intron 35.0%
! GGTATTTGGTGAGAACTTAA+GGG - tig0020421:137922-137941 None:intergenic 35.0%
! TGGTATTTGGTGAGAACTTA+AGG - tig0020421:137923-137942 None:intergenic 35.0%
ATGAACTTCATATCAACTGC+AGG + tig0020421:138034-138053 Msa1381100:intron 35.0%
AACTCACTGTTAAAATGGGA+GGG - tig0020421:138063-138082 None:intergenic 35.0%
TAACTCACTGTTAAAATGGG+AGG - tig0020421:138064-138083 None:intergenic 35.0%
! CGGAATGACAACTTTTCTTT+AGG - tig0020421:138169-138188 None:intergenic 35.0%
ACAAATTAAGGGAGGTGAAA+GGG - tig0020421:138231-138250 None:intergenic 35.0%
CTAGCAAACGGACAAATTAA+GGG - tig0020421:138242-138261 None:intergenic 35.0%
TCAATACCATCAGTTTGTAG+AGG + tig0020421:138522-138541 Msa1381100:intron 35.0%
CAATACCATCAGTTTGTAGA+GGG + tig0020421:138523-138542 Msa1381100:intron 35.0%
AATACCATCAGTTTGTAGAG+GGG + tig0020421:138524-138543 Msa1381100:intron 35.0%
ATGAAACTGATATGTTCCCA+AGG - tig0020421:138558-138577 None:intergenic 35.0%
GTCAACAATGCATTTGACAT+GGG - tig0020421:138600-138619 None:intergenic 35.0%
AGTCAACAATGCATTTGACA+TGG - tig0020421:138601-138620 None:intergenic 35.0%
ATGTCAAATGCATTGTTGAC+TGG + tig0020421:138600-138619 Msa1381100:intron 35.0%
TCTTATGTCTCTCATGCTTT+CGG + tig0020421:139005-139024 Msa1381100:intron 35.0%
TTATTTGTTTACAGGGGTGA+AGG + tig0020421:139123-139142 Msa1381100:intron 35.0%
!! AGCTTTAGCTGATTTGAAAC+AGG + tig0020421:139403-139422 Msa1381100:intron 35.0%
TATAGGAGCTTACTCGTAAA+TGG - tig0020421:140167-140186 None:intergenic 35.0%
!! AAGCTTTGGAGGATCAATAT+AGG - tig0020421:140184-140203 None:intergenic 35.0%
! TGTGGTGATAATGTAAGCTT+TGG - tig0020421:140198-140217 None:intergenic 35.0%
AGCTTACATTATCACCACAT+TGG + tig0020421:140199-140218 Msa1381100:intron 35.0%
!! GTTTTGGACGAAAAGATATG+TGG - tig0020421:140399-140418 None:intergenic 35.0%
! CATATCTTTTCGTCCAAAAC+TGG + tig0020421:140399-140418 Msa1381100:intron 35.0%
!! ATTTTATTATAGTGGGGGAG+GGG - tig0020421:140428-140447 None:intergenic 35.0%
!! GATTTTATTATAGTGGGGGA+GGG - tig0020421:140429-140448 None:intergenic 35.0%
!! TGATTTTATTATAGTGGGGG+AGG - tig0020421:140430-140449 None:intergenic 35.0%
!! ACGTAAATGAAAGCACTAGT+AGG - tig0020421:140542-140561 None:intergenic 35.0%
! GAAGATCGAATATCTGAGAT+AGG + tig0020421:140657-140676 Msa1381100:CDS 35.0%
!! GCATTGTAAGTATTGAGTCT+CGG - tig0020421:140698-140717 None:intergenic 35.0%
!! CAGACTTTTGATTAGGAAAC+AGG - tig0020421:140724-140743 None:intergenic 35.0%
ACTTAGAGATAAGTTTCCAC+AGG + tig0020421:140794-140813 Msa1381100:CDS 35.0%
CTATATCTTTGCAGGTTCTA+TGG + tig0020421:140908-140927 Msa1381100:intron 35.0%
!! GAGATGGATTTTGTGCAATG+AGG - tig0020421:132167-132186 None:intergenic 40.0%
GTTAGATAAGAAACGAGCGA+CGG - tig0020421:132295-132314 None:intergenic 40.0%
! GACTGATTTAGGTCGTAGAT+CGG - tig0020421:132331-132350 None:intergenic 40.0%
! AACTCGATTGCGACTGATTT+AGG - tig0020421:132342-132361 None:intergenic 40.0%
AAGGAGTGAGTAAAGGAATG+CGG - tig0020421:132378-132397 None:intergenic 40.0%
TTTCCATCCGAAGACGAAAT+AGG - tig0020421:132603-132622 None:intergenic 40.0%
CTAATGGGGGAAGTCATATA+TGG + tig0020421:132870-132889 Msa1381100:CDS 40.0%
GATTGCTCATGTGTTGGAAA+AGG + tig0020421:133033-133052 Msa1381100:CDS 40.0%
!! TGAATGTGGATAATGGAGTG+AGG + tig0020421:133210-133229 Msa1381100:intron 40.0%
AATGCGCAATTAACGACACT+AGG - tig0020421:133247-133266 None:intergenic 40.0%
TTGTTCCGCAATACGCTATT+TGG - tig0020421:133330-133349 None:intergenic 40.0%
CTTGCAAGTTCTTGCAGATA+AGG + tig0020421:133446-133465 Msa1381100:intron 40.0%
AGTTCTTGCAGATAAGGAAG+AGG + tig0020421:133452-133471 Msa1381100:intron 40.0%
GTTCTTGCAGATAAGGAAGA+GGG + tig0020421:133453-133472 Msa1381100:intron 40.0%
!! CGTCAAGAGATTGGTTTATG+AGG + tig0020421:133594-133613 Msa1381100:CDS 40.0%
AATATTGATAGATGCAGCCG+AGG + tig0020421:133624-133643 Msa1381100:CDS 40.0%
AGAACATGTGAAGAGCTCTT+TGG + tig0020421:133676-133695 Msa1381100:CDS 40.0%
! TCTTTGGTTCCTTGCTTCTT+GGG + tig0020421:133692-133711 Msa1381100:CDS 40.0%
GCACAAACGTTGAGAACAAT+TGG - tig0020421:133781-133800 None:intergenic 40.0%
TTACTTAGCAGCCTGAAACA+TGG + tig0020421:133927-133946 Msa1381100:intron 40.0%
TAGCTACAAGCATACGTGAA+CGG + tig0020421:134059-134078 Msa1381100:CDS 40.0%
ACGTGAACGGAATGATTATG+GGG + tig0020421:134072-134091 Msa1381100:CDS 40.0%
TATTATCAGTTTCTGCCTCG+TGG - tig0020421:134128-134147 None:intergenic 40.0%
! TTTGTTGTCACGTGACTGAA+AGG + tig0020421:134268-134287 Msa1381100:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + tig0020421:134313-134332 Msa1381100:intron 40.0%
ACTCGGAGTCTCAATAAACT+AGG - tig0020421:134831-134850 None:intergenic 40.0%
GTTTATTGAGACTCCGAGTA+TGG + tig0020421:134832-134851 Msa1381100:intron 40.0%
TCTAGACAGTGTACTTGTAC+AGG - tig0020421:134946-134965 None:intergenic 40.0%
TGTACAAGTACACTGTCTAG+AGG + tig0020421:134945-134964 Msa1381100:intron 40.0%
CCGCCAAAGGATTAATAGAT+TGG - tig0020421:134995-135014 None:intergenic 40.0%
TCATCAAAACCACTGTCTCA+CGG - tig0020421:135110-135129 None:intergenic 40.0%
CTTGAATAAACTCTCTAGCG+TGG + tig0020421:135140-135159 Msa1381100:CDS 40.0%
AAATTCTAGACTCTACCTGC+AGG + tig0020421:135302-135321 Msa1381100:intron 40.0%
AATTCTAGACTCTACCTGCA+GGG + tig0020421:135303-135322 Msa1381100:intron 40.0%
TCTATCAGTAGTAAGACCAG+TGG - tig0020421:135342-135361 None:intergenic 40.0%
TAAACCAACATCTGAGCACA+GGG - tig0020421:135396-135415 None:intergenic 40.0%
ATCTGATGCTTACTCACTAC+AGG + tig0020421:135576-135595 Msa1381100:intron 40.0%
!! CGAAACAGCTTTAAAACCGA+TGG - tig0020421:135683-135702 None:intergenic 40.0%
TTCCAGTACACTGAACAGTA+TGG + tig0020421:135778-135797 Msa1381100:CDS 40.0%
TCCAGTACACTGAACAGTAT+GGG + tig0020421:135779-135798 Msa1381100:CDS 40.0%
ATTGCCCTTCAAGCTGTAAA+TGG + tig0020421:135815-135834 Msa1381100:CDS 40.0%
TGGTCCATTTACAGCTTGAA+GGG - tig0020421:135822-135841 None:intergenic 40.0%
ATGGTCCATTTACAGCTTGA+AGG - tig0020421:135823-135842 None:intergenic 40.0%
! GAAGACTTTGGGAAAAAGGA+AGG + tig0020421:136070-136089 Msa1381100:intron 40.0%
ACAAAATCCCCCTAATTTGG+GGG + tig0020421:136159-136178 Msa1381100:intron 40.0%
ACTCCAATTCCCCCAAATTA+GGG - tig0020421:136171-136190 None:intergenic 40.0%
TACTCCAATTCCCCCAAATT+AGG - tig0020421:136172-136191 None:intergenic 40.0%
ATTATATTGGGGGAGGACTT+TGG + tig0020421:136196-136215 Msa1381100:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - tig0020421:136372-136391 None:intergenic 40.0%
GATCCCGATAGATAGCTAAA+TGG - tig0020421:136437-136456 None:intergenic 40.0%
TAAAGCCTCATGCTTATGGA+TGG + tig0020421:136505-136524 Msa1381100:intron 40.0%
AAAGACCATCCATAAGCATG+AGG - tig0020421:136513-136532 None:intergenic 40.0%
CTCTTACTCTAAGTCTTGGA+GGG - tig0020421:136573-136592 None:intergenic 40.0%
TCTCTTACTCTAAGTCTTGG+AGG - tig0020421:136574-136593 None:intergenic 40.0%
CCTTCTCTTACTCTAAGTCT+TGG - tig0020421:136577-136596 None:intergenic 40.0%
CCAAGACTTAGAGTAAGAGA+AGG + tig0020421:136574-136593 Msa1381100:intron 40.0%
AGTAAGAGAAGGGAATCACA+TGG + tig0020421:136585-136604 Msa1381100:intron 40.0%
! TTCATTCTGGTGTTTGGTTC+AGG - tig0020421:136742-136761 None:intergenic 40.0%
TCATGTACCAAATGTGCACT+AGG + tig0020421:136850-136869 Msa1381100:intron 40.0%
CATTCAACCTAGTGCACATT+TGG - tig0020421:136860-136879 None:intergenic 40.0%
GTTGAATGCTTTAGTTGAGG+TGG + tig0020421:136942-136961 Msa1381100:intron 40.0%
GTTATGGAAACTGATGACAG+TGG + tig0020421:137363-137382 Msa1381100:intron 40.0%
GGAGGTCTCTCAATTATATG+GGG - tig0020421:137774-137793 None:intergenic 40.0%
CTGGAGGTCTCTCAATTATA+TGG - tig0020421:137776-137795 None:intergenic 40.0%
ACTCACTGTTAAAATGGGAG+GGG - tig0020421:138062-138081 None:intergenic 40.0%
GACAAATTAAGGGAGGTGAA+AGG - tig0020421:138232-138251 None:intergenic 40.0%
CCTAGCAAACGGACAAATTA+AGG - tig0020421:138243-138262 None:intergenic 40.0%
!! CCTTAATTTGTCCGTTTGCT+AGG + tig0020421:138240-138259 Msa1381100:intron 40.0%
TCAGACAGATACCTAGCAAA+CGG - tig0020421:138254-138273 None:intergenic 40.0%
ATTTCACTGAGCTAACAACC+TGG - tig0020421:138310-138329 None:intergenic 40.0%
AGGTTGTTAGCTCAGTGAAA+TGG + tig0020421:138309-138328 Msa1381100:intron 40.0%
AACAATGCATTTGACATGGG+AGG - tig0020421:138597-138616 None:intergenic 40.0%
TAACACATTTGGACATGTGC+TGG + tig0020421:138670-138689 Msa1381100:intron 40.0%
TGGGGGCAGTAAAAATTAAC+AGG - tig0020421:139068-139087 None:intergenic 40.0%
! AGCAATGGTGGAATCCTAAA+TGG + tig0020421:139193-139212 Msa1381100:CDS 40.0%
! AATGGTGGAATCCTAAATGG+TGG + tig0020421:139196-139215 Msa1381100:CDS 40.0%
ACTTCTAGCAGTATCCATAG+TGG - tig0020421:139224-139243 None:intergenic 40.0%
AAGACAGCTGGCATTAGATT+TGG - tig0020421:139280-139299 None:intergenic 40.0%
!!! CTTTTGAAACAGCTGTGTCA+TGG + tig0020421:139329-139348 Msa1381100:CDS 40.0%
GGGTTGTAGGTTTCAAAACA+AGG + tig0020421:139483-139502 Msa1381100:intron 40.0%
! GGTGATAATGTAAGCTTTGG+AGG - tig0020421:140195-140214 None:intergenic 40.0%
AACTCTGTCATAGACCAATG+TGG - tig0020421:140216-140235 None:intergenic 40.0%
AAAAGTCAACGGCATAGACA+CGG - tig0020421:140571-140590 None:intergenic 40.0%
!! TCTGGGACAGACTTTTGATT+AGG - tig0020421:140731-140750 None:intergenic 40.0%
TAATCAAAAGTCTGTCCCAG+AGG + tig0020421:140730-140749 Msa1381100:CDS 40.0%
AATCAAAAGTCTGTCCCAGA+GGG + tig0020421:140731-140750 Msa1381100:CDS 40.0%
AAATAGCAACGAGTCTAAGC+AGG - tig0020421:140941-140960 None:intergenic 40.0%
ATCAGAGAATTGTTCGGGAA+TGG + tig0020421:141031-141050 Msa1381100:CDS 40.0%
TGATTTAGGTCGTAGATCGG+TGG - tig0020421:132328-132347 None:intergenic 45.0%
AGGCCAAAAGGAGTGAGTAA+AGG - tig0020421:132385-132404 None:intergenic 45.0%
CAAAGCTGCACAATCTTCGT+CGG + tig0020421:132464-132483 Msa1381100:CDS 45.0%
AGTTGTGTTATCCGCGTTTG+CGG + tig0020421:132521-132540 Msa1381100:CDS 45.0%
CTTCCTATTTCGTCTTCGGA+TGG + tig0020421:132597-132616 Msa1381100:CDS 45.0%
GGAGCAAAATGCCGGAAATT+TGG + tig0020421:132691-132710 Msa1381100:intron 45.0%
! GATTGATGGTTTCCACTCAG+AGG - tig0020421:132740-132759 None:intergenic 45.0%
AGTCCGACTAGTAATTCGAG+TGG + tig0020421:132779-132798 Msa1381100:CDS 45.0%
AACCGAACCTCTTGATGAAG+CGG - tig0020421:132846-132865 None:intergenic 45.0%
! AGAGGTTCGGTTGTGACTAA+TGG + tig0020421:132854-132873 Msa1381100:CDS 45.0%
! GAGGTTCGGTTGTGACTAAT+GGG + tig0020421:132855-132874 Msa1381100:CDS 45.0%
! AGGTTCGGTTGTGACTAATG+GGG + tig0020421:132856-132875 Msa1381100:CDS 45.0%
ATGGGGGAAGTCATATATGG+AGG + tig0020421:132873-132892 Msa1381100:CDS 45.0%
GAGGAGTAATGCCGATCAAT+TGG + tig0020421:132892-132911 Msa1381100:CDS 45.0%
!! GGTTTAAATGATGGTGGTCC+TGG + tig0020421:132926-132945 Msa1381100:CDS 45.0%
!! TTAAATGATGGTGGTCCTGG+TGG + tig0020421:132929-132948 Msa1381100:CDS 45.0%
GCAACAGGTTACTTCCTTTG+AGG + tig0020421:132964-132983 Msa1381100:CDS 45.0%
! TTCCTTTGAGGAAGAGTCTG+TGG + tig0020421:132976-132995 Msa1381100:CDS 45.0%
! GGAAGAGTCTGTGGACTTTT+TGG + tig0020421:132985-133004 Msa1381100:CDS 45.0%
AGCGTATTGCGGAACAATAG+CGG + tig0020421:133333-133352 Msa1381100:intron 45.0%
! ACGGTATAGTGCCACTATAG+TGG + tig0020421:133381-133400 Msa1381100:intron 45.0%
TGCAGATAAGGAAGAGGGAT+TGG + tig0020421:133458-133477 Msa1381100:intron 45.0%
AATCAGAATCCAATGCCGAG+AGG - tig0020421:133567-133586 None:intergenic 45.0%
TTCGAGATCCGTCAAGAGAT+TGG + tig0020421:133585-133604 Msa1381100:CDS 45.0%
! CTCTTTGGTTCCTTGCTTCT+TGG + tig0020421:133691-133710 Msa1381100:CDS 45.0%
! CTTTGGTTCCTTGCTTCTTG+GGG + tig0020421:133693-133712 Msa1381100:CDS 45.0%
CGAATGAGCAAAATCCGCAA+TGG - tig0020421:133751-133770 None:intergenic 45.0%
TGTTCTCAACGTTTGTGCTC+AGG + tig0020421:133783-133802 Msa1381100:CDS 45.0%
TGGTTGCTACTCCATGTTTC+AGG - tig0020421:133941-133960 None:intergenic 45.0%
TGAAACATGGAGTAGCAACC+AGG + tig0020421:133940-133959 Msa1381100:CDS 45.0%
GAAACATGGAGTAGCAACCA+GGG + tig0020421:133941-133960 Msa1381100:CDS 45.0%
CTTTGTGACACTCTCGAACA+TGG - tig0020421:133969-133988 None:intergenic 45.0%
!! CATGTTCGAGAGTGTCACAA+AGG + tig0020421:133967-133986 Msa1381100:CDS 45.0%
GGATTCGATAATCTGACAGC+TGG - tig0020421:133993-134012 None:intergenic 45.0%
GTCAGATTATCGAATCCTGC+TGG + tig0020421:133996-134015 Msa1381100:CDS 45.0%
TATCGAATCCTGCTGGACTA+AGG + tig0020421:134003-134022 Msa1381100:CDS 45.0%
CATTATGTACGTGTCTACCG+GGG - tig0020421:134035-134054 None:intergenic 45.0%
CCATTATGTACGTGTCTACC+GGG - tig0020421:134036-134055 None:intergenic 45.0%
CCCATTATGTACGTGTCTAC+CGG - tig0020421:134037-134056 None:intergenic 45.0%
CCGGTAGACACGTACATAAT+GGG + tig0020421:134034-134053 Msa1381100:CDS 45.0%
CGGTAGACACGTACATAATG+GGG + tig0020421:134035-134054 Msa1381100:CDS 45.0%
ACGGAATGATTATGGGGAAC+AGG + tig0020421:134078-134097 Msa1381100:CDS 45.0%
! AGTAAGGGATCCCACCATTT+TGG - tig0020421:134359-134378 None:intergenic 45.0%
! AAAATGGTGGGATCCCTTAC+TGG + tig0020421:134358-134377 Msa1381100:intron 45.0%
TTCGAAATCTCGTTTCCCTC+AGG + tig0020421:134656-134675 Msa1381100:intron 45.0%
GTTTCTCTTGGTTGTCCTGA+GGG - tig0020421:134674-134693 None:intergenic 45.0%
AAGGAACTGCAGGTTTCTCT+TGG - tig0020421:134686-134705 None:intergenic 45.0%
AGCTGTACAAAAGGAACTGC+AGG - tig0020421:134696-134715 None:intergenic 45.0%
CAGCACTTAGTTCAGCAAAC+AGG - tig0020421:134731-134750 None:intergenic 45.0%
GATTCATATACAGCCGCCAA+AGG - tig0020421:135008-135027 None:intergenic 45.0%
CACTGCATCTAGAAGCTGTA+TGG - tig0020421:135052-135071 None:intergenic 45.0%
TCTAGATGCAGTGTCTCGAA+TGG + tig0020421:135059-135078 Msa1381100:CDS 45.0%
GAAATCTTACCGTGAGACAG+TGG + tig0020421:135098-135117 Msa1381100:CDS 45.0%
ACTCTCTCAGTTGTAGCTTC+AGG - tig0020421:135192-135211 None:intergenic 45.0%
GCAATAAGAAGAAACCCTGC+AGG - tig0020421:135320-135339 None:intergenic 45.0%
GGGTTTCTTCTTATTGCCAC+TGG + tig0020421:135323-135342 Msa1381100:CDS 45.0%
CTAAACCAACATCTGAGCAC+AGG - tig0020421:135397-135416 None:intergenic 45.0%
TTAGCTGCCGAGTCTAAAAG+TGG + tig0020421:135413-135432 Msa1381100:CDS 45.0%
ATGCTTACTCACTACAGGAG+TGG + tig0020421:135581-135600 Msa1381100:intron 45.0%
! AGGAGTGGAGCAGATTTTCT+GGG + tig0020421:135596-135615 Msa1381100:intron 45.0%
TACTTCAAACGTGGAGCCAT+CGG + tig0020421:135664-135683 Msa1381100:CDS 45.0%
! CTGAGTCTTTTGTACAGGAG+GGG - tig0020421:135741-135760 None:intergenic 45.0%
! CCTGAGTCTTTTGTACAGGA+GGG - tig0020421:135742-135761 None:intergenic 45.0%
! ACCTGAGTCTTTTGTACAGG+AGG - tig0020421:135743-135762 None:intergenic 45.0%
! GTCACCTGAGTCTTTTGTAC+AGG - tig0020421:135746-135765 None:intergenic 45.0%
TCCCATACTGTTCAGTGTAC+TGG - tig0020421:135783-135802 None:intergenic 45.0%
ACTGAACAGTATGGGAAGCA+TGG + tig0020421:135787-135806 Msa1381100:CDS 45.0%
! CTGAACAGTATGGGAAGCAT+GGG + tig0020421:135788-135807 Msa1381100:CDS 45.0%
TGGGATCAACTTACTAGTGG+AGG - tig0020421:135899-135918 None:intergenic 45.0%
!! GTAGGCTTTGTTTGCGAGTT+TGG + tig0020421:136033-136052 Msa1381100:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + tig0020421:136037-136056 Msa1381100:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + tig0020421:136038-136057 Msa1381100:intron 45.0%
! AGGGGAAGACTTTGGGAAAA+AGG + tig0020421:136066-136085 Msa1381100:intron 45.0%
!!! ATTTAGAGTTTTGGGAGGGG+AGG + tig0020421:136107-136126 Msa1381100:intron 45.0%
!!! TTTAGAGTTTTGGGAGGGGA+GGG + tig0020421:136108-136127 Msa1381100:intron 45.0%
TCCAATTCCCCCAAATTAGG+GGG - tig0020421:136169-136188 None:intergenic 45.0%
CTCCAATTCCCCCAAATTAG+GGG - tig0020421:136170-136189 None:intergenic 45.0%
!! AGGACTTTGGAGGGTTTTAG+AGG + tig0020421:136209-136228 Msa1381100:intron 45.0%
!!! GGACTTTGGAGGGTTTTAGA+GGG + tig0020421:136210-136229 Msa1381100:intron 45.0%
TATGGGGGGTGGGAAATATA+GGG - tig0020421:136339-136358 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - tig0020421:136367-136386 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - tig0020421:136368-136387 None:intergenic 45.0%
! TAATCCCAGCTTGTTTGGAC+TGG + tig0020421:136685-136704 Msa1381100:intron 45.0%
! TGCACTAGGTTGAATGTGTC+AGG + tig0020421:136864-136883 Msa1381100:intron 45.0%
! AGGTTTCAAACTAGAGTGCC+AGG + tig0020421:137336-137355 Msa1381100:intron 45.0%
! GGTTTCAAACTAGAGTGCCA+GGG + tig0020421:137337-137356 Msa1381100:intron 45.0%
TCAGTTTCCATAACTGTCCC+TGG - tig0020421:137357-137376 None:intergenic 45.0%
TCACCAAATACCATGTCTGC+TGG + tig0020421:137930-137949 Msa1381100:intron 45.0%
CACCAAATACCATGTCTGCT+GGG + tig0020421:137931-137950 Msa1381100:intron 45.0%
ACCAAATACCATGTCTGCTG+GGG + tig0020421:137932-137951 Msa1381100:intron 45.0%
GCAAACGGACAAATTAAGGG+AGG - tig0020421:138239-138258 None:intergenic 45.0%
!! ATGTCTCTCTGTTTCTGTCC+AGG + tig0020421:138289-138308 Msa1381100:intron 45.0%
TAGCTCAGTGAAATGGCTTG+AGG + tig0020421:138316-138335 Msa1381100:CDS 45.0%
ATCAACTCTCCCACCTAAAG+CGG - tig0020421:138435-138454 None:intergenic 45.0%
!! TTTAGGTGGGAGAGTTGATG+TGG + tig0020421:138436-138455 Msa1381100:CDS 45.0%
GCATCAATGACCACAATCTC+AGG + tig0020421:138458-138477 Msa1381100:CDS 45.0%
TCAATGACCACAATCTCAGG+TGG + tig0020421:138461-138480 Msa1381100:intron 45.0%
ATGCAATCCACCTGAGATTG+TGG - tig0020421:138471-138490 None:intergenic 45.0%
AGTTGCTTGTCAACAGCACA+AGG - tig0020421:138950-138969 None:intergenic 45.0%
TGTCTCTCATGCTTTCGGTT+TGG + tig0020421:139010-139029 Msa1381100:intron 45.0%
GTCTCTCATGCTTTCGGTTT+GGG + tig0020421:139011-139030 Msa1381100:intron 45.0%
ACAGGAGTTAAGAAGGAGCA+AGG - tig0020421:139050-139069 None:intergenic 45.0%
ATCATCCGCTTTAGCAGCAA+TGG + tig0020421:139178-139197 Msa1381100:CDS 45.0%
TTCCACCATTGCTGCTAAAG+CGG - tig0020421:139186-139205 None:intergenic 45.0%
!! GTTAAGCACTGAAAGACAGC+TGG - tig0020421:139292-139311 None:intergenic 45.0%
CTTAACTGCGATCGTTCACA+GGG + tig0020421:139306-139325 Msa1381100:CDS 45.0%
TGAAACAGCTGTGTCATGGA+TGG + tig0020421:139333-139352 Msa1381100:CDS 45.0%
CAGATATTCGATCTTCCTGC+AGG - tig0020421:140653-140672 None:intergenic 45.0%
! TCGAATATCTGAGATAGGCC+AGG + tig0020421:140662-140681 Msa1381100:CDS 45.0%
TCGTATATGATCCTCCCTCT+GGG - tig0020421:140748-140767 None:intergenic 45.0%
TTGCGATAAATGTCCACCGC+CGG + tig0020421:132212-132231 Msa1381100:CDS 50.0%
AGATAAGAAACGAGCGACGG+CGG - tig0020421:132292-132311 None:intergenic 50.0%
AGGAATGCGGAATTGAACGG+AGG - tig0020421:132365-132384 None:intergenic 50.0%
GTTGAACGGTTGAGGCCAAA+AGG - tig0020421:132397-132416 None:intergenic 50.0%
! AAATCGGCGTTGAACGGTTG+AGG - tig0020421:132405-132424 None:intergenic 50.0%
! GCAACGAAATCGGCGTTGAA+CGG - tig0020421:132411-132430 None:intergenic 50.0%
CGACGAAGATTGTGCAGCTT+TGG - tig0020421:132466-132485 None:intergenic 50.0%
CGCGGATAACACAACTTCAC+CGG - tig0020421:132517-132536 None:intergenic 50.0%
AGAATCCTGTTCCGCAAACG+CGG - tig0020421:132535-132554 None:intergenic 50.0%
ATATGCGGCACAGATTGCTG+TGG + tig0020421:132650-132669 Msa1381100:intron 50.0%
GCGCCACTCGAATTACTAGT+CGG - tig0020421:132785-132804 None:intergenic 50.0%
GACTAGTAATTCGAGTGGCG+CGG + tig0020421:132784-132803 Msa1381100:CDS 50.0%
CACCGCTTCATCAAGAGGTT+CGG + tig0020421:132841-132860 Msa1381100:CDS 50.0%
! GGTTCGGTTGTGACTAATGG+GGG + tig0020421:132857-132876 Msa1381100:CDS 50.0%
GTCCACAGACTCTTCCTCAA+AGG - tig0020421:132981-133000 None:intergenic 50.0%
! TCATGTTGATCCCGCGCTTT+TGG + tig0020421:133057-133076 Msa1381100:CDS 50.0%
!! TTGGAGCAGGCTAGGTTGAT+TGG + tig0020421:133076-133095 Msa1381100:CDS 50.0%
!! TGGAGCAGGCTAGGTTGATT+GGG + tig0020421:133077-133096 Msa1381100:CDS 50.0%
CAACAGTAGCGCCACTATAG+CGG + tig0020421:133284-133303 Msa1381100:intron 50.0%
AATCAAGAGCCTCTCGGCAT+TGG + tig0020421:133555-133574 Msa1381100:CDS 50.0%
TTGTGCTACCCCAAGAAGCA+AGG - tig0020421:133704-133723 None:intergenic 50.0%
! GCACAAATTGCTATTGCCCG+AGG + tig0020421:133718-133737 Msa1381100:CDS 50.0%
! CAAATTGCTATTGCCCGAGG+AGG + tig0020421:133721-133740 Msa1381100:CDS 50.0%
GTTTGTGCTCAGGTGCACTT+TGG + tig0020421:133793-133812 Msa1381100:intron 50.0%
CCCGGTAGACACGTACATAA+TGG + tig0020421:134033-134052 Msa1381100:CDS 50.0%
GTCACGTGACTGAAAGGTCA+CGG + tig0020421:134274-134293 Msa1381100:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG + tig0020421:134275-134294 Msa1381100:intron 50.0%
AAGGTCACGGGTTCAAGTCT+TGG + tig0020421:134287-134306 Msa1381100:intron 50.0%
! ATGCGGGAGCTTTAGTGCAA+CGG + tig0020421:134390-134409 Msa1381100:intron 50.0%
GGTTTCTCTTGGTTGTCCTG+AGG - tig0020421:134675-134694 None:intergenic 50.0%
TGCAGTCAACAAGTCTGAGC+TGG + tig0020421:134749-134768 Msa1381100:CDS 50.0%
GTGTCTCGAATGGCCAGTTT+AGG + tig0020421:135069-135088 Msa1381100:CDS 50.0%
AGCACAGGGAGAGTAATCGA+TGG - tig0020421:135382-135401 None:intergenic 50.0%
CTGCCGAGTCTAAAAGTGGA+AGG + tig0020421:135417-135436 Msa1381100:CDS 50.0%
! CAGGAGTGGAGCAGATTTTC+TGG + tig0020421:135595-135614 Msa1381100:intron 50.0%
AACAAGCTGCAGCAACTGCA+GGG - tig0020421:135631-135650 None:intergenic 50.0%
! GATGGCTCCACGTTTGAAGT+AGG - tig0020421:135665-135684 None:intergenic 50.0%
! TCTTTTGTACAGGAGGGGCT+AGG - tig0020421:135736-135755 None:intergenic 50.0%
CCCTCCTGTACAAAAGACTC+AGG + tig0020421:135739-135758 Msa1381100:CDS 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + tig0020421:136036-136055 Msa1381100:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + tig0020421:136043-136062 Msa1381100:intron 50.0%
GGGAAAAAGGAAGGAGCAAG+TGG + tig0020421:136079-136098 Msa1381100:intron 50.0%
!! TTTTGGGAGGGGAGGGTTTT+GGG + tig0020421:136115-136134 Msa1381100:intron 50.0%
TCCCCCTAATTTGGGGGAAT+TGG + tig0020421:136165-136184 Msa1381100:intron 50.0%
ATATTGGGGGAGGACTTTGG+AGG + tig0020421:136199-136218 Msa1381100:intron 50.0%
TATTGGGGGAGGACTTTGGA+GGG + tig0020421:136200-136219 Msa1381100:intron 50.0%
ATGGGGGGTGGGAAATATAG+GGG - tig0020421:136338-136357 None:intergenic 50.0%
CTATGGGGGGTGGGAAATAT+AGG - tig0020421:136340-136359 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - tig0020421:136369-136388 None:intergenic 50.0%
ATGGCCAGTCCAAACAAGCT+GGG - tig0020421:136692-136711 None:intergenic 50.0%
AATGGCCAGTCCAAACAAGC+TGG - tig0020421:136693-136712 None:intergenic 50.0%
TTCCCTCCTAGAGGTGAGAA+TGG - tig0020421:136711-136730 None:intergenic 50.0%
ATTCTGGCATGGTGGCTACA+AGG + tig0020421:137316-137335 Msa1381100:intron 50.0%
! TAGAGTGCCAGGGACAGTTA+TGG + tig0020421:137347-137366 Msa1381100:intron 50.0%
GATTTGCACTTAGATCCCGG+AGG - tig0020421:137694-137713 None:intergenic 50.0%
TCCCCAGCAGACATGGTATT+TGG - tig0020421:137936-137955 None:intergenic 50.0%
!! TGCTGGGGACGTTGATTTGT+AGG + tig0020421:137947-137966 Msa1381100:intron 50.0%
!! GGGGACGTTGATTTGTAGGA+TGG + tig0020421:137951-137970 Msa1381100:intron 50.0%
CTAAATGCTCTGCACAACCC+AGG + tig0020421:138350-138369 Msa1381100:CDS 50.0%
CTTTCTCATTGCCACTGCCT+TGG - tig0020421:138382-138401 None:intergenic 50.0%
AGCAGTTCTCTGTGCAAGAG+CGG - tig0020421:138405-138424 None:intergenic 50.0%
!! ACTGCTCTTTCTGCCGCTTT+AGG + tig0020421:138419-138438 Msa1381100:CDS 50.0%
!! CTCTTTCTGCCGCTTTAGGT+GGG + tig0020421:138423-138442 Msa1381100:CDS 50.0%
ACTGATATGTTCCCAAGGCG+AGG - tig0020421:138553-138572 None:intergenic 50.0%
!! CTCATGCTTTCGGTTTGGGT+TGG + tig0020421:139015-139034 Msa1381100:intron 50.0%
GTTAAGAAGGAGCAAGGCAG+TGG - tig0020421:139044-139063 None:intergenic 50.0%
ATGCCAGTCACGATAGAGTG+GGG - tig0020421:139086-139105 None:intergenic 50.0%
CATGCCAGTCACGATAGAGT+GGG - tig0020421:139087-139106 None:intergenic 50.0%
ATCCGCTTTAGCAGCAATGG+TGG + tig0020421:139181-139200 Msa1381100:CDS 50.0%
!! CCATAGTGGTGCCACCATTT+AGG - tig0020421:139210-139229 None:intergenic 50.0%
CCTAAATGGTGGCACCACTA+TGG + tig0020421:139207-139226 Msa1381100:CDS 50.0%
GCTTAACTGCGATCGTTCAC+AGG + tig0020421:139305-139324 Msa1381100:CDS 50.0%
ACAGCTGTGTCATGGATGGT+AGG + tig0020421:139337-139356 Msa1381100:intron 50.0%
! ACCCCTTCAAGTGCTGCAAT+GGG + tig0020421:140501-140520 Msa1381100:intron 50.0%
ACCCCATTGCAGCACTTGAA+GGG - tig0020421:140506-140525 None:intergenic 50.0%
AACCCCATTGCAGCACTTGA+AGG - tig0020421:140507-140526 None:intergenic 50.0%
!! TAACTGATTGGTCTGCCTGC+AGG + tig0020421:140635-140654 Msa1381100:intron 50.0%
CTCGTATATGATCCTCCCTC+TGG - tig0020421:140749-140768 None:intergenic 50.0%
AAATGCTCCATGCACAAGCC+AGG + tig0020421:141071-141090 Msa1381100:CDS 50.0%
AATGCTCCATGCACAAGCCA+GGG + tig0020421:141072-141091 Msa1381100:CDS 50.0%
AGCTGAGAACGCGAAACCCT+AGG - tig0020421:132258-132277 None:intergenic 55.0%
GGTGAATCCAGCAACCTCGT+CGG - tig0020421:132496-132515 None:intergenic 55.0%
GACGAGGTTGCTGGATTCAC+CGG + tig0020421:132495-132514 Msa1381100:CDS 55.0%
GTTATCCGCGTTTGCGGAAC+AGG + tig0020421:132527-132546 Msa1381100:CDS 55.0%
! ATTTTGCTCCCCAGCGTGCT+CGG - tig0020421:132681-132700 None:intergenic 55.0%
! TGATGAAGCGGTGCTAGCAG+TGG - tig0020421:132834-132853 None:intergenic 55.0%
GCTAGCACCGCTTCATCAAG+AGG + tig0020421:132836-132855 Msa1381100:CDS 55.0%
!! AATGATGGTGGTCCTGGTGG+AGG + tig0020421:132932-132951 Msa1381100:CDS 55.0%
GTGGCGCTACTGTTGCATAG+CGG - tig0020421:133279-133298 None:intergenic 55.0%
! AAGAGGGATTGGCACGAGCA+GGG + tig0020421:133469-133488 Msa1381100:CDS 55.0%
TCCAGATAGCAAGCACGCCT+CGG - tig0020421:133644-133663 None:intergenic 55.0%
!! AGGCGTGCTTGCTATCTGGA+TGG + tig0020421:133644-133663 Msa1381100:CDS 55.0%
!! CGTGCTTGCTATCTGGATGG+AGG + tig0020421:133647-133666 Msa1381100:CDS 55.0%
CACTCTCGAACATGGTTCCC+TGG - tig0020421:133961-133980 None:intergenic 55.0%
GCATACGCAGGGTCCAGTAA+GGG - tig0020421:134374-134393 None:intergenic 55.0%
CTTACTGGACCCTGCGTATG+CGG + tig0020421:134373-134392 Msa1381100:intron 55.0%
TTACTGGACCCTGCGTATGC+GGG + tig0020421:134374-134393 Msa1381100:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - tig0020421:134385-134404 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - tig0020421:134386-134405 None:intergenic 55.0%
! TGCGGGAGCTTTAGTGCAAC+GGG + tig0020421:134391-134410 Msa1381100:intron 55.0%
CTCTCCCTGTGCTCAGATGT+TGG + tig0020421:135389-135408 Msa1381100:CDS 55.0%
GAACAAGCTGCAGCAACTGC+AGG - tig0020421:135632-135651 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + tig0020421:136042-136061 Msa1381100:intron 55.0%
GGAAGGGAGGGGAAGACTTT+GGG + tig0020421:136059-136078 Msa1381100:intron 55.0%
!!! GTTTTGGGAGGGGAGGGTTT+TGG + tig0020421:136114-136133 Msa1381100:intron 55.0%
! TTTGGGAGGGGAGGGTTTTG+GGG + tig0020421:136116-136135 Msa1381100:intron 55.0%
AGTTTGGAGGGGAGGGCTAT+GGG - tig0020421:136356-136375 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - tig0020421:136363-136382 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - tig0020421:136364-136383 None:intergenic 55.0%
! GACTGGCCATTCTCACCTCT+AGG + tig0020421:136702-136721 Msa1381100:intron 55.0%
TGGCCATTCTCACCTCTAGG+AGG + tig0020421:136705-136724 Msa1381100:intron 55.0%
! GGCCATTCTCACCTCTAGGA+GGG + tig0020421:136706-136725 Msa1381100:intron 55.0%
TGCAACTGCGGATTTGCACC+AGG + tig0020421:137207-137226 Msa1381100:intron 55.0%
ATCAACGTCCCCAGCAGACA+TGG - tig0020421:137943-137962 None:intergenic 55.0%
!! GCTCTTTCTGCCGCTTTAGG+TGG + tig0020421:138422-138441 Msa1381100:CDS 55.0%
GCAGCCCCTCTACAAACTGA+TGG - tig0020421:138531-138550 None:intergenic 55.0%
TGCCAGTCACGATAGAGTGG+GGG - tig0020421:139085-139104 None:intergenic 55.0%
CCATGCCAGTCACGATAGAG+TGG - tig0020421:139088-139107 None:intergenic 55.0%
CCACTCTATCGTGACTGGCA+TGG + tig0020421:139085-139104 Msa1381100:intron 55.0%
! CACCCCTTCAAGTGCTGCAA+TGG + tig0020421:140500-140519 Msa1381100:intron 55.0%
CCCCATTGCAGCACTTGAAG+GGG - tig0020421:140505-140524 None:intergenic 55.0%
! CCCCTTCAAGTGCTGCAATG+GGG + tig0020421:140502-140521 Msa1381100:intron 55.0%
TGAGATAGGCCAGGAAGCTG+AGG + tig0020421:140671-140690 Msa1381100:CDS 55.0%
GAGATAGGCCAGGAAGCTGA+GGG + tig0020421:140672-140691 Msa1381100:CDS 55.0%
CAAAAGTCTGTCCCAGAGGG+AGG + tig0020421:140734-140753 Msa1381100:CDS 55.0%
CGTTGATGCCAGCGGAAGAA+GGG - tig0020421:140978-140997 None:intergenic 55.0%
TCGTTGATGCCAGCGGAAGA+AGG - tig0020421:140979-140998 None:intergenic 55.0%
AGCAGGATCGTTGATGCCAG+CGG - tig0020421:140986-141005 None:intergenic 55.0%
CTGGCATCAACGATCCTGCT+TGG + tig0020421:140986-141005 Msa1381100:CDS 55.0%
GATCCGGCGGAGAGATACTC+CGG - tig0020421:132234-132253 None:intergenic 60.0%
ACGCGAAACCCTAGGCGATC+CGG - tig0020421:132250-132269 None:intergenic 60.0%
GAAACGAGCGACGGCGGTAA+CGG - tig0020421:132286-132305 None:intergenic 60.0%
TTCGTCGGATTTCGCCGACG+AGG + tig0020421:132479-132498 Msa1381100:CDS 60.0%
GATTTCGCCGACGAGGTTGC+TGG + tig0020421:132486-132505 Msa1381100:CDS 60.0%
CACGCTGGGGAGCAAAATGC+CGG + tig0020421:132683-132702 Msa1381100:intron 60.0%
TTCGAGTGGCGCGGCTTCTA+AGG + tig0020421:132793-132812 Msa1381100:CDS 60.0%
GTCCTGGTGGAGGCTCTTCT+GGG + tig0020421:132942-132961 Msa1381100:CDS 60.0%
TGGAGGCTCTTCTGGGCAAC+AGG + tig0020421:132949-132968 Msa1381100:CDS 60.0%
!!! TGATCCCGCGCTTTTGGAGC+AGG + tig0020421:133063-133082 Msa1381100:CDS 60.0%
! CTAGCCTGCTCCAAAAGCGC+GGG - tig0020421:133070-133089 None:intergenic 60.0%
CCTAGCCTGCTCCAAAAGCG+CGG - tig0020421:133071-133090 None:intergenic 60.0%
! GAAGAGGGATTGGCACGAGC+AGG + tig0020421:133468-133487 Msa1381100:CDS 60.0%
! AGAGGGATTGGCACGAGCAG+GGG + tig0020421:133470-133489 Msa1381100:CDS 60.0%
TCCGCAATGGCTGACCTCCT+CGG - tig0020421:133738-133757 None:intergenic 60.0%
CGCATACGCAGGGTCCAGTA+AGG - tig0020421:134375-134394 None:intergenic 60.0%
GCAGCAACTGCAGGGAGCAA+AGG - tig0020421:135623-135642 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + tig0020421:136047-136066 Msa1381100:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + tig0020421:136048-136067 Msa1381100:intron 60.0%
GGGAAGGGAGGGGAAGACTT+TGG + tig0020421:136058-136077 Msa1381100:intron 60.0%
TTTGGAGGGGAGGGCTATGG+GGG - tig0020421:136354-136373 None:intergenic 60.0%
GTTTGGAGGGGAGGGCTATG+GGG - tig0020421:136355-136374 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGCTA+TGG - tig0020421:136357-136376 None:intergenic 60.0%
TGCCCCCACTCTATCGTGAC+TGG + tig0020421:139080-139099 Msa1381100:intron 60.0%
CACGATGACCCTTCTTCCGC+TGG + tig0020421:140967-140986 Msa1381100:CDS 60.0%
CGGACTGTCGATGTCCAAGC+AGG - tig0020421:141003-141022 None:intergenic 60.0%
! AGAAGGCCCTGGCTTGTGCA+TGG - tig0020421:141081-141100 None:intergenic 60.0%
CACAAGCCAGGGCCTTCTTC+AGG + tig0020421:141083-141102 Msa1381100:CDS 60.0%
ATCTCTCCGCCGGATCGCCT+AGG + tig0020421:132238-132257 Msa1381100:CDS 65.0%
TCTCTCCGCCGGATCGCCTA+GGG + tig0020421:132239-132258 Msa1381100:CDS 65.0%
CGAAACCCTAGGCGATCCGG+CGG - tig0020421:132247-132266 None:intergenic 65.0%
TGTGGCTGTTCCGAGCACGC+TGG + tig0020421:132668-132687 Msa1381100:intron 65.0%
GTGGCTGTTCCGAGCACGCT+GGG + tig0020421:132669-132688 Msa1381100:intron 65.0%
TGGCTGTTCCGAGCACGCTG+GGG + tig0020421:132670-132689 Msa1381100:intron 65.0%
GCTCAGAGCTCGCCTCTGAG+TGG + tig0020421:132725-132744 Msa1381100:intron 65.0%
GGTCCTGGTGGAGGCTCTTC+TGG + tig0020421:132941-132960 Msa1381100:CDS 65.0%
TGCCCAGAAGAGCCTCCACC+AGG - tig0020421:132947-132966 None:intergenic 65.0%
!!! CCGCGCTTTTGGAGCAGGCT+AGG + tig0020421:133068-133087 Msa1381100:CDS 65.0%
!! GCCGAGGCGTGCTTGCTATC+TGG + tig0020421:133640-133659 Msa1381100:CDS 65.0%
CCGCAATGGCTGACCTCCTC+GGG - tig0020421:133737-133756 None:intergenic 65.0%
CCCGAGGAGGTCAGCCATTG+CGG + tig0020421:133734-133753 Msa1381100:CDS 65.0%
GGCTCGCTCCTTAGTCCAGC+AGG - tig0020421:134014-134033 None:intergenic 65.0%
CTGGACTAAGGAGCGAGCCC+CGG + tig0020421:134015-134034 Msa1381100:CDS 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG + tig0020421:136046-136065 Msa1381100:intron 65.0%
TTGGAGGGGAGGGCTATGGG+GGG - tig0020421:136353-136372 None:intergenic 65.0%
CACAACCCAGGCAGTCGCCA+AGG + tig0020421:138362-138381 Msa1381100:CDS 65.0%
CACTGCCTTGGCGACTGCCT+GGG - tig0020421:138370-138389 None:intergenic 65.0%
TAGAGGGGCTGCCTCGCCTT+GGG + tig0020421:138539-138558 Msa1381100:intron 65.0%
! GGGGGAGGGGAGTCCAGTTT+TGG - tig0020421:140415-140434 None:intergenic 65.0%
AGTCTCGGCCCTCAGCTTCC+TGG - tig0020421:140683-140702 None:intergenic 65.0%
GCGGAGAGATACTCCGGCGG+TGG - tig0020421:132228-132247 None:intergenic 70.0%
CCGGCGGAGAGATACTCCGG+CGG - tig0020421:132231-132250 None:intergenic 70.0%
! CCGCCGGAGTATCTCTCCGC+CGG + tig0020421:132228-132247 Msa1381100:CDS 70.0%
!! GGCGCGGCTTCTAAGGCTGC+TGG + tig0020421:132800-132819 Msa1381100:CDS 70.0%
AGGGGAGGGCTATGGGGGGT+GGG - tig0020421:136349-136368 None:intergenic 70.0%
CCACTGCCTTGGCGACTGCC+TGG - tig0020421:138371-138390 None:intergenic 70.0%
CCAGGCAGTCGCCAAGGCAG+TGG + tig0020421:138368-138387 Msa1381100:CDS 70.0%
GTAGAGGGGCTGCCTCGCCT+TGG + tig0020421:138538-138557 Msa1381100:intron 70.0%
GAGGGGAGGGCTATGGGGGG+TGG - tig0020421:136350-136369 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0020421 gene 132138 141110 132138 ID=Msa1381100;Name=Msa1381100
tig0020421 mRNA 132138 141110 132138 ID=Msa1381100-mRNA-1;Parent=Msa1381100;Name=Msa1381100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.90|0.75|1|1|1|12|0|966
tig0020421 exon 132138 132629 132138 ID=Msa1381100-mRNA-1:exon:7333;Parent=Msa1381100-mRNA-1
tig0020421 exon 132731 133135 132731 ID=Msa1381100-mRNA-1:exon:7334;Parent=Msa1381100-mRNA-1
tig0020421 exon 133463 133804 133463 ID=Msa1381100-mRNA-1:exon:7335;Parent=Msa1381100-mRNA-1
tig0020421 exon 133938 134099 133938 ID=Msa1381100-mRNA-1:exon:7336;Parent=Msa1381100-mRNA-1
tig0020421 exon 134678 134848 134678 ID=Msa1381100-mRNA-1:exon:7337;Parent=Msa1381100-mRNA-1
tig0020421 exon 135057 135215 135057 ID=Msa1381100-mRNA-1:exon:7338;Parent=Msa1381100-mRNA-1
tig0020421 exon 135311 135438 135311 ID=Msa1381100-mRNA-1:exon:7339;Parent=Msa1381100-mRNA-1
tig0020421 exon 135598 135904 135598 ID=Msa1381100-mRNA-1:exon:7340;Parent=Msa1381100-mRNA-1
tig0020421 exon 138311 138479 138311 ID=Msa1381100-mRNA-1:exon:7341;Parent=Msa1381100-mRNA-1
tig0020421 exon 139137 139354 139137 ID=Msa1381100-mRNA-1:exon:7342;Parent=Msa1381100-mRNA-1
tig0020421 exon 140657 140815 140657 ID=Msa1381100-mRNA-1:exon:7343;Parent=Msa1381100-mRNA-1
tig0020421 exon 140922 141110 140922 ID=Msa1381100-mRNA-1:exon:7344;Parent=Msa1381100-mRNA-1
tig0020421 CDS 132138 132629 132138 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 132731 133135 132731 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 133463 133804 133463 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 133938 134099 133938 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 134678 134848 134678 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 135057 135215 135057 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 135311 135438 135311 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 135598 135904 135598 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 138311 138479 138311 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 139137 139354 139137 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 140657 140815 140657 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
tig0020421 CDS 140922 141110 140922 ID=Msa1381100-mRNA-1:cds;Parent=Msa1381100-mRNA-1
Gene Sequence

>Msa1381100

ATGGAAGCGTTGATCGAATTATGCGACCTCATTGCACAAAATCCATCTCAATTCTCCGATAAACTCTCATGGATTTGCGATAAATGTCCACCGCCGGAGTATCTCTCCGCCGGATCGCCTAGGGTTTCGCGTTCTCAGCTCAATGCCGTTACCGCCGTCGCTCGTTTCTTATCTAACTGCGTAGATTCCACCGATCTACGACCTAAATCAGTCGCAATCGAGTTCCTCCGTTCAATTCCGCATTCCTTTACTCACTCCTTTTGGCCTCAACCGTTCAACGCCGATTTCGTTGCATCTTTCTTCAACGATTTCATTGGTTATGTTTCCAAAGCTGCACAATCTTCGTCGGATTTCGCCGACGAGGTTGCTGGATTCACCGGTGAAGTTGTGTTATCCGCGTTTGCGGAACAGGATTCTGTTATTGCTAGGGCTTTTTTGATCGCTGTGTCGCAGAATTTTCTTCCTATTTCGTCTTCGGATGGAAATAAATTGAGCTCGCCTCTGAGTGGAAACCATCAATCTCAGACCAATTATAATGGTAGTCCGACTAGTAATTCGAGTGGCGCGGCTTCTAAGGCTGCTGGTGATGATGCCACTGCTAGCACCGCTTCATCAAGAGGTTCGGTTGTGACTAATGGGGGAAGTCATATATGGAGGAGTAATGCCGATCAATTGGCGCAAAATTTAGGTTTAAATGATGGTGGTCCTGGTGGAGGCTCTTCTGGGCAACAGGTTACTTCCTTTGAGGAAGAGTCTGTGGACTTTTTGGAGAGACAAGAAATTGCTTTTAAAGTGATTGCTCATGTGTTGGAAAAGGTTCATGTTGATCCCGCGCTTTTGGAGCAGGCTAGGTTGATTGGGAAGAAGCAGATTCAATCCATGTCTGCTTTTCTAAAGATAAGGAAGAGGGATTGGCACGAGCAGGGGTCAAGTCTAAAAGCTAGAATTAATACCAAATTGTCAGTTTATAAAGCTGCAGTTTCTATGAAAATCAAGAGCCTCTCGGCATTGGATTCTGATTCGAGATCCGTCAAGAGATTGGTTTATGAGGCAGTTGCAATATTGATAGATGCAGCCGAGGCGTGCTTGCTATCTGGATGGAGGAAGTTGAGAACATGTGAAGAGCTCTTTGGTTCCTTGCTTCTTGGGGTAGCACAAATTGCTATTGCCCGAGGAGGTCAGCCATTGCGGATTTTGCTCATTCGCCTAAAACCAATTGTTCTCAACGTTTGTGCTCAGCCTGAAACATGGAGTAGCAACCAGGGAACCATGTTCGAGAGTGTCACAAAGGCCAGCTGTCAGATTATCGAATCCTGCTGGACTAAGGAGCGAGCCCCGGTAGACACGTACATAATGGGGTTAGCTACAAGCATACGTGAACGGAATGATTATGGGGAACAGGACAACCAAGAGAAACCTGCAGTTCCTTTTGTACAGCTAAACGTTATACGCCTGTTTGCTGAACTAAGTGCTGCAGTCAACAAGTCTGAGCTGGTAGATGTGATATTACCTCTTTTTATAGAAAGCTTAGAAGAGGGCGATGCTTCAACTCCTAGTTTATTGAGACTCCGACTTCTAGATGCAGTGTCTCGAATGGCCAGTTTAGGTTTTGAGAAATCTTACCGTGAGACAGTGGTTTTGATGACTCGAAGTTACTTGAATAAACTCTCTAGCGTGGGATCAGCTGAAAGCAAAACAGAAGCACCTGAAGCTACAACTGAGAGAGTTGAAACTCTACCTGCAGGGTTTCTTCTTATTGCCACTGGTCTTACTACTGATAGATTACGTTCAGATTATCGCCATCGATTACTCTCCCTGTGCTCAGATGTTGGTTTAGCTGCCGAGTCTAAAAGTGGAAGGAGTGGAGCAGATTTTCTGGGTCCTTTGCTCCCTGCAGTTGCTGCAGCTTGTTCTGATTTTGATCCTACTTCAAACGTGGAGCCATCGGTTTTAAAGCTGTTTCGAAACCTTTGGTTCTATGTTGCTCTTTTTGGCCTAGCCCCTCCTGTACAAAAGACTCAGGTGACTACAAAATCAGTTTCCAGTACACTGAACAGTATGGGAAGCATGGGTGCAATTGCCCTTCAAGCTGTAAATGGACCATATATGTGGAATATGGAGTGGTCTTCTGCTGTTAATCAAATTGCACAAGGGACTCCTCCACTAGTTGTTAGCTCAGTGAAATGGCTTGAGGACGAGTTAGAACTAAATGCTCTGCACAACCCAGGCAGTCGCCAAGGCAGTGGCAATGAGAAAGCCGCTCTTGCACAGAGAACTGCTCTTTCTGCCGCTTTAGGTGGGAGAGTTGATGTGGCATCAATGACCACAATCTCAGGGGTGAAGGCTACTTATCTTCTTGCTGTAGCTTTTCTCGAGATCATCCGCTTTAGCAGCAATGGTGGAATCCTAAATGGTGGCACCACTATGGATACTGCTAGAAGTGCTTTTACTTGTGTCTTTGAATATCTTAAGACTCCAAATCTAATGCCAGCTGTCTTTCAGTGCTTAACTGCGATCGTTCACAGGGCTTTTGAAACAGCTGTGTCATGGATGGAAGATCGAATATCTGAGATAGGCCAGGAAGCTGAGGGCCGAGACTCAATACTTACAATGCATACCTGTTTCCTAATCAAAAGTCTGTCCCAGAGGGAGGATCATATACGAGATATTGCAGAGAACTTGCTAATTCAACTTAGAGATAAGTTTCCACAGGTTCTATGGGATTCATCCTGCTTAGACTCGTTGCTATTTTCATTTCACGATGACCCTTCTTCCGCTGGCATCAACGATCCTGCTTGGACATCGACAGTCCGTTCATTGTATCAGAGAATTGTTCGGGAATGGATAATTAAATCGCTTTCAAATGCTCCATGCACAAGCCAGGGCCTTCTTCAGGTTTAA
Protein sequence

>Msa1381100

MEALIELCDLIAQNPSQFSDKLSWICDKCPPPEYLSAGSPRVSRSQLNAVTAVARFLSNCVDSTDLRPKSVAIEFLRSIPHSFTHSFWPQPFNADFVASFFNDFIGYVSKAAQSSSDFADEVAGFTGEVVLSAFAEQDSVIARAFLIAVSQNFLPISSSDGNKLSSPLSGNHQSQTNYNGSPTSNSSGAASKAAGDDATASTASSRGSVVTNGGSHIWRSNADQLAQNLGLNDGGPGGGSSGQQVTSFEEESVDFLERQEIAFKVIAHVLEKVHVDPALLEQARLIGKKQIQSMSAFLKIRKRDWHEQGSSLKARINTKLSVYKAAVSMKIKSLSALDSDSRSVKRLVYEAVAILIDAAEACLLSGWRKLRTCEELFGSLLLGVAQIAIARGGQPLRILLIRLKPIVLNVCAQPETWSSNQGTMFESVTKASCQIIESCWTKERAPVDTYIMGLATSIRERNDYGEQDNQEKPAVPFVQLNVIRLFAELSAAVNKSELVDVILPLFIESLEEGDASTPSLLRLRLLDAVSRMASLGFEKSYRETVVLMTRSYLNKLSSVGSAESKTEAPEATTERVETLPAGFLLIATGLTTDRLRSDYRHRLLSLCSDVGLAAESKSGRSGADFLGPLLPAVAAACSDFDPTSNVEPSVLKLFRNLWFYVALFGLAPPVQKTQVTTKSVSSTLNSMGSMGAIALQAVNGPYMWNMEWSSAVNQIAQGTPPLVVSSVKWLEDELELNALHNPGSRQGSGNEKAALAQRTALSAALGGRVDVASMTTISGVKATYLLAVAFLEIIRFSSNGGILNGGTTMDTARSAFTCVFEYLKTPNLMPAVFQCLTAIVHRAFETAVSWMEDRISEIGQEAEGRDSILTMHTCFLIKSLSQREDHIRDIAENLLIQLRDKFPQVLWDSSCLDSLLFSFHDDPSSAGINDPAWTSTVRSLYQRIVREWIIKSLSNAPCTSQGLLQV*