Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082150 | XP_024639356.1 | 99.466 | 562 | 3 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082150 | sp|Q54V77|PYRG_DICDI | 60.808 | 569 | 203 | 6 | 1 | 551 | 1 | 567 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082150 | G7IDT8 | 99.466 | 562 | 3 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1152 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030620 | Msa0082150 | 0.908839 | 1.101560e-81 | -8.615850e-47 |
| Msa0082150 | Msa0128510 | 0.852928 | 3.344907e-61 | -8.615850e-47 |
| Msa0082150 | Msa0138720 | 0.904095 | 1.755238e-79 | -8.615850e-47 |
| Msa0082150 | Msa0174530 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082150 | MtrunA17_Chr1g0195001 | 99.466 | 562 | 3 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1152 |
| Msa0082150 | MtrunA17_Chr8g0356221 | 71.404 | 570 | 155 | 2 | 1 | 562 | 1 | 570 | 0.0 | 856 |
| Msa0082150 | MtrunA17_Chr2g0309341 | 72.894 | 546 | 148 | 0 | 1 | 546 | 1 | 546 | 0.0 | 842 |
| Msa0082150 | MtrunA17_Chr8g0369081 | 71.196 | 552 | 159 | 0 | 1 | 552 | 1 | 552 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0082150 | AT4G02120.1 | 83.813 | 556 | 90 | 0 | 1 | 556 | 1 | 556 | 0.0 | 983 |
| Msa0082150 | AT4G02120.2 | 80.623 | 578 | 90 | 1 | 1 | 556 | 1 | 578 | 0.0 | 972 |
| Msa0082150 | AT4G02120.5 | 79.137 | 556 | 77 | 1 | 1 | 556 | 1 | 517 | 0.0 | 907 |
| Msa0082150 | AT4G02120.3 | 86.570 | 484 | 65 | 0 | 1 | 484 | 1 | 484 | 0.0 | 876 |
| Msa0082150 | AT3G12670.1 | 73.732 | 552 | 144 | 1 | 1 | 552 | 1 | 551 | 0.0 | 847 |
| Msa0082150 | AT4G02120.4 | 86.910 | 466 | 61 | 0 | 1 | 466 | 1 | 466 | 0.0 | 844 |
| Msa0082150 | AT1G30820.1 | 70.780 | 551 | 161 | 0 | 1 | 551 | 1 | 551 | 0.0 | 833 |
| Msa0082150 | AT4G20320.2 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 806 |
| Msa0082150 | AT4G20320.5 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 806 |
| Msa0082150 | AT4G20320.6 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 806 |
| Msa0082150 | AT4G20320.4 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 806 |
| Msa0082150 | AT4G20320.1 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 806 |
| Msa0082150 | AT2G34890.1 | 65.480 | 562 | 192 | 1 | 1 | 560 | 1 | 562 | 0.0 | 786 |
| Msa0082150 | AT4G20320.3 | 68.526 | 502 | 158 | 0 | 50 | 551 | 1 | 502 | 0.0 | 738 |
Find 176 sgRNAs with CRISPR-Local
Find 597 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATAATATTATAATTA+TGG | 0.126755 | 1_2:+60963466 | Msa0082150:three_prime_UTR |
| GAGCGGGAAGGTTGATATTT+TGG | 0.186108 | 1_2:-60953998 | None:intergenic |
| TTCATGATGTACCAAATATT+TGG | 0.205073 | 1_2:+60957683 | Msa0082150:CDS |
| ATTGTTCTCTCTGGCATATT+TGG | 0.242741 | 1_2:-60959994 | None:intergenic |
| TTTATAGGTTGATTTGGATT+TGG | 0.257444 | 1_2:+60954478 | Msa0082150:intron |
| TTATAGGTTGATTTGGATTT+GGG | 0.261073 | 1_2:+60954479 | Msa0082150:intron |
| GCAGCTTGTGTCTTGGTTCC+AGG | 0.262807 | 1_2:+60959930 | Msa0082150:CDS |
| CATGCTGCGGCATGTGCTTC+TGG | 0.277150 | 1_2:-60959334 | None:intergenic |
| GTCTTGGTTCCAGGAGGATT+TGG | 0.288037 | 1_2:+60959939 | Msa0082150:CDS |
| AGGGGAATATGCCAAATATT+TGG | 0.292011 | 1_2:-60957694 | None:intergenic |
| ATGAAAATTACAACAGGATT+TGG | 0.292322 | 1_2:-60960211 | None:intergenic |
| TTACAACAGGATTTGGTGTT+TGG | 0.292770 | 1_2:-60960204 | None:intergenic |
| AATTGCACGCCTACATAATA+TGG | 0.299023 | 1_2:-60962079 | None:intergenic |
| GAAAAGGAGCACGCACGTTT+GGG | 0.306880 | 1_2:-60963285 | None:intergenic |
| GAAGATAATATTATAATTAT+GGG | 0.320733 | 1_2:+60963467 | Msa0082150:three_prime_UTR |
| CTAGTCATAAACAGGGTTCT+AGG | 0.329918 | 1_2:+60960304 | Msa0082150:intron |
| GCCTGTGAGTGTCAGGTTAA+TGG | 0.343980 | 1_2:-60963208 | None:intergenic |
| AGAAAAGGAGCACGCACGTT+TGG | 0.345282 | 1_2:-60963286 | None:intergenic |
| GGGTCTTCATTTCCATCAAC+CGG | 0.349986 | 1_2:-60954895 | None:intergenic |
| GGCGGAGTCGTTAGCGGCCT+CGG | 0.350600 | 1_2:+60954100 | Msa0082150:CDS |
| AGAGACTCACTCTAAGTAAC+AGG | 0.352836 | 1_2:-60957714 | None:intergenic |
| AGCCGACACAACACAGTGTC+AGG | 0.360915 | 1_2:+60956498 | Msa0082150:CDS |
| CCTTACTTGGGGATTTGCTT+GGG | 0.363800 | 1_2:+60960020 | Msa0082150:CDS |
| CCAGGCCGAGATTTGAATTC+GGG | 0.365733 | 1_2:-60962106 | None:intergenic |
| TACAACAGGATTTGGTGTTT+GGG | 0.372108 | 1_2:-60960203 | None:intergenic |
| TCCTTACTTGGGGATTTGCT+TGG | 0.377880 | 1_2:+60960019 | Msa0082150:CDS |
| CCCAGGCCGAGATTTGAATT+CGG | 0.381611 | 1_2:-60962107 | None:intergenic |
| CTACACCCAACACTGGTATC+AGG | 0.389842 | 1_2:-60956375 | None:intergenic |
| TACTACTGGGAAAATATATC+AGG | 0.394580 | 1_2:+60954550 | Msa0082150:CDS |
| ATTGAAACTTTAGAAGAAGC+TGG | 0.397254 | 1_2:+60961795 | Msa0082150:CDS |
| CGCGGAGGCCGCAGGCTTTG+AGG | 0.401516 | 1_2:-60954156 | None:intergenic |
| GATCTACGATTCTTTACTAT+AGG | 0.408278 | 1_2:+60962566 | Msa0082150:exon |
| ATTCAATGTGCAGCCTCTGC+TGG | 0.411306 | 1_2:+60957509 | Msa0082150:intron |
| AGAGAACAATGTTCCTTACT+TGG | 0.411823 | 1_2:+60960007 | Msa0082150:CDS |
| GGTCTCATATTGGCGGCAAC+GGG | 0.413570 | 1_2:+60962499 | Msa0082150:intron |
| TCACCGATGCAATCAGAAAC+TGG | 0.416127 | 1_2:+60954851 | Msa0082150:CDS |
| TCAGTCCATTGCCGCAAATC+AGG | 0.416330 | 1_2:-60958509 | None:intergenic |
| TTTGCGGCAATGGACTGATA+TGG | 0.421515 | 1_2:+60958514 | Msa0082150:CDS |
| TTTATAAGCCTGTGAGTGTC+AGG | 0.421744 | 1_2:-60963215 | None:intergenic |
| AAGGATAATAATATTACTAC+TGG | 0.423934 | 1_2:+60954536 | Msa0082150:CDS |
| GCTGCAATCCAGTCAATTGA+TGG | 0.432899 | 1_2:-60959176 | None:intergenic |
| CGCGTCACCTCCATCAAAAT+CGG | 0.434250 | 1_2:+60954175 | Msa0082150:CDS |
| TTCATATTTATCTGTTGTAA+AGG | 0.435122 | 1_2:+60958696 | Msa0082150:CDS |
| CACCTCCTGATTTGCGGCAA+TGG | 0.440971 | 1_2:+60958504 | Msa0082150:CDS |
| CTGGGCTAAAATTTGTTGGC+AGG | 0.443903 | 1_2:+60961814 | Msa0082150:CDS |
| TGCCGTAGAGCCTCAATAAA+CGG | 0.445911 | 1_2:-60955077 | None:intergenic |
| TGACATTGTTCAGGTAAATC+CGG | 0.446706 | 1_2:+60961767 | Msa0082150:intron |
| GTTGCTGTGATCCCGGTTGA+TGG | 0.447710 | 1_2:+60954883 | Msa0082150:CDS |
| GATGTTTGTGTGATTGAGCT+TGG | 0.449727 | 1_2:+60954922 | Msa0082150:CDS |
| GAGGACGACGCCGATGCTGC+TGG | 0.450311 | 1_2:-60954137 | None:intergenic |
| GAGAACAATGTTCCTTACTT+GGG | 0.452256 | 1_2:+60960008 | Msa0082150:CDS |
| ATTGTGCACTGTCATCTTCA+AGG | 0.452441 | 1_2:-60959205 | None:intergenic |
| AATTACCAGGTATGGCAATT+CGG | 0.452917 | 1_2:+60961633 | Msa0082150:intron |
| ATGAAGTACGTTCTCATCTC+CGG | 0.453080 | 1_2:+60954079 | Msa0082150:CDS |
| GCAGAGTGCAGCTTGTGTCT+TGG | 0.454760 | 1_2:+60959923 | Msa0082150:intron |
| ATTGGCGGCAACGGGGAAGT+TGG | 0.454817 | 1_2:+60962507 | Msa0082150:CDS |
| GATACCAGTGTTGGGTGTAG+TGG | 0.458939 | 1_2:+60956378 | Msa0082150:CDS |
| TCTAAAGTTTCAATAACATC+CGG | 0.459751 | 1_2:-60961786 | None:intergenic |
| GTCGTTAGCGGCCTCGGCAA+AGG | 0.462544 | 1_2:+60954106 | Msa0082150:CDS |
| AGTTTCATTTCATTTCATCT+TGG | 0.462595 | 1_2:+60953953 | Msa0082150:five_prime_UTR |
| AAAACTTCTCCATGTTCAAA+AGG | 0.464491 | 1_2:-60954317 | None:intergenic |
| GTCAGGGAACTAAGAGCATT+GGG | 0.465525 | 1_2:+60956515 | Msa0082150:CDS |
| CCCGAATTCAAATCTCGGCC+TGG | 0.467639 | 1_2:+60962106 | Msa0082150:CDS |
| GGAATGAATGAATGAGTTGT+AGG | 0.469905 | 1_2:-60954043 | None:intergenic |
| ATCACTAGCATTCATGAGAA+TGG | 0.472024 | 1_2:+60962538 | Msa0082150:CDS |
| GAAGCTGGGCTAAAATTTGT+TGG | 0.472530 | 1_2:+60961810 | Msa0082150:CDS |
| CATTGAGACCATCAATTGAC+TGG | 0.472847 | 1_2:+60959168 | Msa0082150:CDS |
| ATACCAGTGTTGGGTGTAGT+GGG | 0.477063 | 1_2:+60956379 | Msa0082150:CDS |
| GTAAGGAACATTGTTCTCTC+TGG | 0.480928 | 1_2:-60960003 | None:intergenic |
| GGAGGTGACGCGGAGGCCGC+AGG | 0.484019 | 1_2:-60954164 | None:intergenic |
| AACAAAGCAGATGGTCTCCC+AGG | 0.484640 | 1_2:-60962124 | None:intergenic |
| CTATACTGTAGGTCTCATAT+TGG | 0.486234 | 1_2:+60962489 | Msa0082150:intron |
| GGCGTCACCGCCAGCAGCAT+CGG | 0.487935 | 1_2:+60954127 | Msa0082150:CDS |
| TCAATCACACAAACATCAGC+AGG | 0.489125 | 1_2:-60954916 | None:intergenic |
| TACTTAGTCACTCATTATGA+AGG | 0.490591 | 1_2:+60963408 | Msa0082150:three_prime_UTR |
| CCTACATAATATGGATGACT+TGG | 0.496534 | 1_2:-60962070 | None:intergenic |
| CCCAAGCAAATCCCCAAGTA+AGG | 0.496781 | 1_2:-60960020 | None:intergenic |
| TACAGCAGCTTAACTTACTT+AGG | 0.505369 | 1_2:+60957845 | Msa0082150:CDS |
| CCGAATTCAAATCTCGGCCT+GGG | 0.505440 | 1_2:+60962107 | Msa0082150:CDS |
| AGGTCTCATATTGGCGGCAA+CGG | 0.505545 | 1_2:+60962498 | Msa0082150:intron |
| TTGAAACTTTAGAAGAAGCT+GGG | 0.507446 | 1_2:+60961796 | Msa0082150:CDS |
| TGGATGAGACAGAAGTTGTC+AGG | 0.508265 | 1_2:-60956346 | None:intergenic |
| TCCTTGGTACTTTCCAGCAG+AGG | 0.508640 | 1_2:-60957522 | None:intergenic |
| TCTGGCATGAAAATTACAAC+AGG | 0.511552 | 1_2:-60960217 | None:intergenic |
| TACTGTAGGTCTCATATTGG+CGG | 0.513078 | 1_2:+60962492 | Msa0082150:intron |
| TGTCAGGGAACTAAGAGCAT+TGG | 0.513673 | 1_2:+60956514 | Msa0082150:CDS |
| TGCCGTTTATTGAGGCTCTA+CGG | 0.516145 | 1_2:+60955075 | Msa0082150:CDS |
| TTCTTAGTCTGTGCTTGAGA+AGG | 0.517567 | 1_2:+60954660 | Msa0082150:intron |
| TTCATCCCGAATTCAAATCT+CGG | 0.519745 | 1_2:+60962101 | Msa0082150:CDS |
| ACCATTAACCTGACACTCAC+AGG | 0.520204 | 1_2:+60963207 | Msa0082150:three_prime_UTR |
| GTATGGCAATTCGGAGTATG+TGG | 0.526581 | 1_2:+60961642 | Msa0082150:CDS |
| CCAGCGTCAATGTTCAAATA+CGG | 0.527929 | 1_2:-60954284 | None:intergenic |
| TGTTAGCCTGATACCAGTGT+TGG | 0.528405 | 1_2:+60956369 | Msa0082150:CDS |
| ACCAGTGTTGGGTGTAGTGG+GGG | 0.530013 | 1_2:+60956381 | Msa0082150:CDS |
| CCAAGTCATCCATATTATGT+AGG | 0.530338 | 1_2:+60962070 | Msa0082150:CDS |
| GGATGAAAGCGGAAGACGAA+TGG | 0.530600 | 1_2:+60961836 | Msa0082150:CDS |
| GTGCAACACAAGCATGCAGT+AGG | 0.531316 | 1_2:-60959142 | None:intergenic |
| TGAGTCTATGCCGTTTATTG+AGG | 0.534928 | 1_2:+60955067 | Msa0082150:CDS |
| CCACGATCTCCAAATCCTCC+TGG | 0.535514 | 1_2:-60959948 | None:intergenic |
| GAGCACGCACGTTTGGGGCA+TGG | 0.537304 | 1_2:-60963279 | None:intergenic |
| TGAGTCGGTTGCTGTGATCC+CGG | 0.538290 | 1_2:+60954876 | Msa0082150:CDS |
| ATCTCCGGCGGAGTCGTTAG+CGG | 0.542697 | 1_2:+60954094 | Msa0082150:CDS |
| GTTTGTGTGATTGAGCTTGG+AGG | 0.545170 | 1_2:+60954925 | Msa0082150:CDS |
| GTGCTACACCTCCTGATTTG+CGG | 0.545667 | 1_2:+60958498 | Msa0082150:CDS |
| TCCCTGACACTGTGTTGTGT+CGG | 0.548570 | 1_2:-60956500 | None:intergenic |
| TTTGGAGATCGTGGTGTGAG+AGG | 0.552633 | 1_2:+60959957 | Msa0082150:CDS |
| GTTAGCCTGATACCAGTGTT+GGG | 0.554596 | 1_2:+60956370 | Msa0082150:CDS |
| TCTTGATGTTACACTTACAA+AGG | 0.556810 | 1_2:+60954517 | Msa0082150:CDS |
| AGAACAATGTTCCTTACTTG+GGG | 0.557436 | 1_2:+60960009 | Msa0082150:CDS |
| TGGGCTAAAATTTGTTGGCA+GGG | 0.558448 | 1_2:+60961815 | Msa0082150:CDS |
| TGCTGTCATACCCACTTGAA+AGG | 0.561108 | 1_2:-60955105 | None:intergenic |
| TACCAGTGTTGGGTGTAGTG+GGG | 0.563851 | 1_2:+60956380 | Msa0082150:CDS |
| ACACTGGTATCAGGCTAACA+TGG | 0.566475 | 1_2:-60956366 | None:intergenic |
| TGTGCTTGAGAAGGAGCGCA+AGG | 0.569431 | 1_2:+60954669 | Msa0082150:CDS |
| CCAGGAGGATTTGGAGATCG+TGG | 0.581850 | 1_2:+60959948 | Msa0082150:CDS |
| AATCCAGTTTCTGATTGCAT+CGG | 0.583198 | 1_2:-60954854 | None:intergenic |
| GAGCGCAAGGGAGATTATCT+CGG | 0.583903 | 1_2:+60954682 | Msa0082150:CDS |
| GTTTGTGTTTATATCCGAGC+GGG | 0.589396 | 1_2:-60954014 | None:intergenic |
| CAGGTTAGGATTGCCATGGT+GGG | 0.589890 | 1_2:+60958652 | Msa0082150:intron |
| TTATAATTATGGGTTATGAG+TGG | 0.590260 | 1_2:+60963477 | Msa0082150:three_prime_UTR |
| ATGGGAAGTACCATGAGACT+TGG | 0.591140 | 1_2:+60960333 | Msa0082150:CDS |
| TCCATGTTCAAAAGGAGACA+TGG | 0.591963 | 1_2:-60954309 | None:intergenic |
| GCAAATCAGGAGGTGTAGCA+CGG | 0.592136 | 1_2:-60958496 | None:intergenic |
| TTTACAGGTTAGGATTGCCA+TGG | 0.595375 | 1_2:+60958648 | Msa0082150:intron |
| TGCAACACAAGCATGCAGTA+GGG | 0.596048 | 1_2:-60959141 | None:intergenic |
| AAAATATCAACCTTCCCGCT+CGG | 0.598030 | 1_2:+60954000 | Msa0082150:five_prime_UTR |
| ATTGAGCTTGGAGGCACTGT+GGG | 0.598258 | 1_2:+60954934 | Msa0082150:CDS |
| TGATTGTTTGATGTGTATAG+AGG | 0.598464 | 1_2:+60963118 | Msa0082150:three_prime_UTR |
| TGGCGGTGACGCCTTTGCCG+AGG | 0.599015 | 1_2:-60954117 | None:intergenic |
| ACAGGTTAGGATTGCCATGG+TGG | 0.599284 | 1_2:+60958651 | Msa0082150:intron |
| ACGGCAATTATCCTTTCAAG+TGG | 0.601495 | 1_2:+60955094 | Msa0082150:CDS |
| CAGAAGCACATGCCGCAGCA+TGG | 0.601979 | 1_2:+60959335 | Msa0082150:CDS |
| GAGGCCGCTAACGACTCCGC+CGG | 0.602079 | 1_2:-60954098 | None:intergenic |
| GGGGCATGGTGAACTGAACA+AGG | 0.602093 | 1_2:-60963265 | None:intergenic |
| TTTAGCAAGTCGCTCTGCTG+AGG | 0.603158 | 1_2:+60956553 | Msa0082150:CDS |
| GTGTTTATATCCGAGCGGGA+AGG | 0.606105 | 1_2:-60954010 | None:intergenic |
| ACTGAAAACTTACTGGAACA+TGG | 0.606549 | 1_2:-60957563 | None:intergenic |
| CTTCAGAGTCTTCCATGCTG+CGG | 0.607051 | 1_2:-60959347 | None:intergenic |
| CTGCTGTAAAATTGAGTGGT+GGG | 0.610647 | 1_2:-60957830 | None:intergenic |
| CTGATTGCATCGGTGATATG+CGG | 0.611112 | 1_2:-60954844 | None:intergenic |
| ATTCGGAGTATGTGGATGAA+CGG | 0.613690 | 1_2:+60961650 | Msa0082150:CDS |
| GAGCGACTTGCTAAAAGATG+AGG | 0.613956 | 1_2:-60956545 | None:intergenic |
| GCTTGTGTCTTGGTTCCAGG+AGG | 0.614810 | 1_2:+60959933 | Msa0082150:CDS |
| GGTCTTCATTTCCATCAACC+GGG | 0.617073 | 1_2:-60954894 | None:intergenic |
| AAAAGGAGCACGCACGTTTG+GGG | 0.618322 | 1_2:-60963284 | None:intergenic |
| TCTTCGAGATCCAAGTCTCA+TGG | 0.624956 | 1_2:-60960343 | None:intergenic |
| TGAAAGCGGAAGACGAATGG+AGG | 0.626991 | 1_2:+60961839 | Msa0082150:CDS |
| GCCATGGTGGGAAAATATGT+TGG | 0.628848 | 1_2:+60958664 | Msa0082150:CDS |
| GTCCATTGCCGCAAATCAGG+AGG | 0.628942 | 1_2:-60958506 | None:intergenic |
| CGGCAATTATCCTTTCAAGT+GGG | 0.631841 | 1_2:+60955095 | Msa0082150:CDS |
| GCCGACACAACACAGTGTCA+GGG | 0.640779 | 1_2:+60956499 | Msa0082150:CDS |
| GCCTCTGCTGGAAAGTACCA+AGG | 0.645176 | 1_2:+60957521 | Msa0082150:intron |
| ACAGGGTTCTAGGACTCACA+TGG | 0.646100 | 1_2:+60960314 | Msa0082150:intron |
| TGTTCTTGATGATGGCGGAG+AGG | 0.649503 | 1_2:+60954340 | Msa0082150:CDS |
| GATTGAGCTTGGAGGCACTG+TGG | 0.652060 | 1_2:+60954933 | Msa0082150:CDS |
| CGCAGCATGGAAGACTCTGA+AGG | 0.652129 | 1_2:+60959348 | Msa0082150:CDS |
| GTGCTTGAGAAGGAGCGCAA+GGG | 0.658499 | 1_2:+60954670 | Msa0082150:CDS |
| CCGTATTTGAACATTGACGC+TGG | 0.659655 | 1_2:+60954284 | Msa0082150:CDS |
| AAATTAACTCGCTTATAGTG+TGG | 0.661522 | 1_2:-60963170 | None:intergenic |
| AATCAGAAACTGGATTGAGT+CGG | 0.661872 | 1_2:+60954861 | Msa0082150:CDS |
| GCTGCTGTAAAATTGAGTGG+TGG | 0.662926 | 1_2:-60957831 | None:intergenic |
| TTTGTTGGCAGGGATGAAAG+CGG | 0.667172 | 1_2:+60961825 | Msa0082150:CDS |
| AGGATAATAATATTACTACT+GGG | 0.667804 | 1_2:+60954537 | Msa0082150:CDS |
| GAGACTCACTCTAAGTAACA+GGG | 0.668287 | 1_2:-60957713 | None:intergenic |
| AAGTACGTTCTCATCTCCGG+CGG | 0.672070 | 1_2:+60954082 | Msa0082150:CDS |
| TAAGCTGCTGTAAAATTGAG+TGG | 0.672139 | 1_2:-60957834 | None:intergenic |
| GTCTCATATTGGCGGCAACG+GGG | 0.674517 | 1_2:+60962500 | Msa0082150:CDS |
| ATGTGTATAGAGGTCTGAAG+CGG | 0.677343 | 1_2:+60963128 | Msa0082150:three_prime_UTR |
| GACGACGCCGATGCTGCTGG+CGG | 0.688026 | 1_2:-60954134 | None:intergenic |
| GGCGTCGTCCTCAAAGCCTG+CGG | 0.692971 | 1_2:+60954148 | Msa0082150:CDS |
| CAATCACACAAACATCAGCA+GGG | 0.701082 | 1_2:-60954915 | None:intergenic |
| AGACTCACTCTAAGTAACAG+GGG | 0.704240 | 1_2:-60957712 | None:intergenic |
| CAGGGTTCTAGGACTCACAT+GGG | 0.704702 | 1_2:+60960315 | Msa0082150:intron |
| TAGTACTAACAGATTCAGTG+AGG | 0.746597 | 1_2:-60958553 | None:intergenic |
| ACGGCATCGTCATAGATACG+AGG | 0.761487 | 1_2:+60961669 | Msa0082150:CDS |
| TGTTTGTGTTTATATCCGAG+CGG | 0.765064 | 1_2:-60954015 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTCAATTTTAATTTATTA+TGG | + | chr1_2:60954402-60954421 | Msa0082150:intron | 10.0% |
| !! | TAATAAATTAAAGATTATCT+GGG | - | chr1_2:60957608-60957627 | None:intergenic | 10.0% |
| !! | TCTAAAAAAATTAAAAAAAG+GGG | + | chr1_2:60959047-60959066 | Msa0082150:intron | 10.0% |
| !! | TGAAGATAATATTATAATTA+TGG | + | chr1_2:60963466-60963485 | Msa0082150:three_prime_UTR | 10.0% |
| !! | GAAGATAATATTATAATTAT+GGG | + | chr1_2:60963467-60963486 | Msa0082150:three_prime_UTR | 10.0% |
| !! | CAAAAAAAAAAATTGAGAAA+CGG | - | chr1_2:60954256-60954275 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTATTATGGTTC+TGG | + | chr1_2:60954408-60954427 | Msa0082150:intron | 15.0% |
| !!! | TTTTTACCTTTAGTATTATA+TGG | - | chr1_2:60955279-60955298 | None:intergenic | 15.0% |
| !!! | AATTTTATTTAAGATCAATC+TGG | + | chr1_2:60955449-60955468 | Msa0082150:intron | 15.0% |
| !!! | TGATGTTTTATTTGATATTA+TGG | + | chr1_2:60956058-60956077 | Msa0082150:intron | 15.0% |
| !!! | AAAAATACGTATGTTTTTAT+AGG | + | chr1_2:60956093-60956112 | Msa0082150:intron | 15.0% |
| !!! | AAAATACGTATGTTTTTATA+GGG | + | chr1_2:60956094-60956113 | Msa0082150:intron | 15.0% |
| !!! | TATAATCATTATTTTGCATT+TGG | + | chr1_2:60956793-60956812 | Msa0082150:intron | 15.0% |
| !! | AATAAAGATTAAAAGTTTGT+CGG | - | chr1_2:60956933-60956952 | None:intergenic | 15.0% |
| !! | CTAATAAATTAAAGATTATC+TGG | - | chr1_2:60957609-60957628 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTTCATCAATTA+AGG | - | chr1_2:60958016-60958035 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTCGTTTAAATC+TGG | + | chr1_2:60958852-60958871 | Msa0082150:intron | 15.0% |
| !! | AAATTGCATTTAAAGAAATT+TGG | + | chr1_2:60959245-60959264 | Msa0082150:intron | 15.0% |
| !!! | GCTTATTTAATTTTATTTTG+TGG | + | chr1_2:60959294-60959313 | Msa0082150:intron | 15.0% |
| !!! | GTAATTTAAAATCTATTCTT+AGG | + | chr1_2:60960141-60960160 | Msa0082150:intron | 15.0% |
| !! | AAAAAAAAAAGTTATCTGAT+GGG | - | chr1_2:60960511-60960530 | None:intergenic | 15.0% |
| !!! | ATAACTTTTTTTTTTCTTTC+TGG | + | chr1_2:60960516-60960535 | Msa0082150:intron | 15.0% |
| !!! | ATTTTATGTAAATGAATATC+AGG | + | chr1_2:60960645-60960664 | Msa0082150:intron | 15.0% |
| !! | AATAGTAGAATATATTACTT+TGG | + | chr1_2:60960818-60960837 | Msa0082150:intron | 15.0% |
| !!! | TCATTAAGAAACATTTTAAA+CGG | + | chr1_2:60963432-60963451 | Msa0082150:three_prime_UTR | 15.0% |
| !!! | TTTTGCTTTTTGACTTTTAT+AGG | + | chr1_2:60954463-60954482 | Msa0082150:intron | 20.0% |
| !! | AAGGATAATAATATTACTAC+TGG | + | chr1_2:60954536-60954555 | Msa0082150:CDS | 20.0% |
| !! | AGGATAATAATATTACTACT+GGG | + | chr1_2:60954537-60954556 | Msa0082150:CDS | 20.0% |
| !!! | TTTATGTTGATTTTGCTTTA+TGG | + | chr1_2:60954624-60954643 | Msa0082150:intron | 20.0% |
| !!! | TGATATTTTTGTTGATCTAT+AGG | + | chr1_2:60955038-60955057 | Msa0082150:intron | 20.0% |
| !!! | GATATTTTTGTTGATCTATA+GGG | + | chr1_2:60955039-60955058 | Msa0082150:intron | 20.0% |
| !!! | ATATTTTTGTTGATCTATAG+GGG | + | chr1_2:60955040-60955059 | Msa0082150:intron | 20.0% |
| !! | TACATATAATCCAAATACTT+AGG | + | chr1_2:60955388-60955407 | Msa0082150:intron | 20.0% |
| !!! | ATAATTCTATGTACCATTTT+TGG | + | chr1_2:60955478-60955497 | Msa0082150:intron | 20.0% |
| !! | TGCTTAAATTTCAAATGTAT+TGG | + | chr1_2:60955586-60955605 | Msa0082150:intron | 20.0% |
| !! | TCTTAAAAGATGTACATTTA+TGG | + | chr1_2:60955936-60955955 | Msa0082150:intron | 20.0% |
| !! | TTTATTTGATATTATGGCAT+TGG | + | chr1_2:60956064-60956083 | Msa0082150:intron | 20.0% |
| !!! | AGTTAATTTTAAATGCATCT+AGG | - | chr1_2:60956601-60956620 | None:intergenic | 20.0% |
| !! | TAAAATTAACTGTGTAACAA+TGG | + | chr1_2:60956610-60956629 | Msa0082150:intron | 20.0% |
| !! | AGATAATATATTTCTCTGTT+TGG | + | chr1_2:60956995-60957014 | Msa0082150:intron | 20.0% |
| !! | GTAAATCAATAAATAGATTG+TGG | + | chr1_2:60957161-60957180 | Msa0082150:intron | 20.0% |
| !!! | TTGTCTTTTATTTTCATAAC+TGG | + | chr1_2:60957880-60957899 | Msa0082150:intron | 20.0% |
| !! | AAAAACTATAAGTCATATGT+TGG | + | chr1_2:60958294-60958313 | Msa0082150:intron | 20.0% |
| !! | TTCATATTTATCTGTTGTAA+AGG | + | chr1_2:60958696-60958715 | Msa0082150:CDS | 20.0% |
| !! | AATCCAAATATGTTGATATT+CGG | - | chr1_2:60959013-60959032 | None:intergenic | 20.0% |
| !!! | AAATTAAAAAAAGGGGTTTT+TGG | + | chr1_2:60959054-60959073 | Msa0082150:intron | 20.0% |
| !! | ATCATAGATATTAAAGCAAT+GGG | - | chr1_2:60959517-60959536 | None:intergenic | 20.0% |
| !! | ACAAAATTTCAGATTCAATA+TGG | - | chr1_2:60959763-60959782 | None:intergenic | 20.0% |
| !! | TGTAATGACAATATTTGTTT+GGG | + | chr1_2:60959888-60959907 | Msa0082150:intron | 20.0% |
| !!! | TAAAATCTATTCTTAGGTTT+TGG | + | chr1_2:60960147-60960166 | Msa0082150:intron | 20.0% |
| !!! | AAAATCTATTCTTAGGTTTT+GGG | + | chr1_2:60960148-60960167 | Msa0082150:intron | 20.0% |
| !!! | TGTAGTGTTTTAATAATTGA+TGG | + | chr1_2:60960428-60960447 | Msa0082150:intron | 20.0% |
| !! | GAAAAAAAAAAGTTATCTGA+TGG | - | chr1_2:60960512-60960531 | None:intergenic | 20.0% |
| !! | GTAATATATTCTACTATTGT+GGG | - | chr1_2:60960816-60960835 | None:intergenic | 20.0% |
| !! | AGTAATATATTCTACTATTG+TGG | - | chr1_2:60960817-60960836 | None:intergenic | 20.0% |
| !! | TGTATACAACATTAATTAGA+GGG | + | chr1_2:60960844-60960863 | Msa0082150:intron | 20.0% |
| !!! | TAAATTCTTTAGGATTACAA+AGG | - | chr1_2:60961156-60961175 | None:intergenic | 20.0% |
| !!! | AGATTTGAAAAAGTTGATTT+TGG | + | chr1_2:60961222-60961241 | Msa0082150:intron | 20.0% |
| !! | GGAAAAGATGTAATATAATT+AGG | + | chr1_2:60961325-60961344 | Msa0082150:intron | 20.0% |
| !!! | TAATATAATTAGGAGTATGT+TGG | + | chr1_2:60961335-60961354 | Msa0082150:intron | 20.0% |
| !! | ACAATCAATTGAAGAATATA+TGG | - | chr1_2:60961505-60961524 | None:intergenic | 20.0% |
| !! | TCAATACTAAATTAGAAAAC+AGG | - | chr1_2:60961750-60961769 | None:intergenic | 20.0% |
| !! | GCTTATAATTTCTTGAAAAA+TGG | + | chr1_2:60962364-60962383 | Msa0082150:intron | 20.0% |
| !!! | ATTTCTACATTACTTTTCTA+AGG | + | chr1_2:60962593-60962612 | Msa0082150:three_prime_UTR | 20.0% |
| !! | ACAAATTATGTTAAATCAGA+AGG | - | chr1_2:60963054-60963073 | None:intergenic | 20.0% |
| ! | AGTTTCATTTCATTTCATCT+TGG | + | chr1_2:60953953-60953972 | Msa0082150:five_prime_UTR | 25.0% |
| !! | AGAACGTACTTCATATTTTT+GGG | - | chr1_2:60954073-60954092 | None:intergenic | 25.0% |
| !!! | TTGACTTTTATAGGTTGATT+TGG | + | chr1_2:60954472-60954491 | Msa0082150:intron | 25.0% |
| !!! | TTTATAGGTTGATTTGGATT+TGG | + | chr1_2:60954478-60954497 | Msa0082150:intron | 25.0% |
| !!! | TTATAGGTTGATTTGGATTT+GGG | + | chr1_2:60954479-60954498 | Msa0082150:intron | 25.0% |
| !! | GCTTGTTTCATTTTATGTTA+TGG | + | chr1_2:60954578-60954597 | Msa0082150:intron | 25.0% |
| !!! | TGAATAATGGATATTTTGTG+TGG | + | chr1_2:60954768-60954787 | Msa0082150:intron | 25.0% |
| !!! | TTTAGTATTATATGGACTAG+AGG | - | chr1_2:60955271-60955290 | None:intergenic | 25.0% |
| ! | TCTAGTCCATATAATACTAA+AGG | + | chr1_2:60955270-60955289 | Msa0082150:intron | 25.0% |
| !! | AACAAGTAATGTCAATTTTG+TGG | + | chr1_2:60955350-60955369 | Msa0082150:intron | 25.0% |
| ! | CATTAGTACTATACCAAAAA+TGG | - | chr1_2:60955494-60955513 | None:intergenic | 25.0% |
| !! | ACATTTGAAATTTAAGCACA+TGG | - | chr1_2:60955584-60955603 | None:intergenic | 25.0% |
| ! | TATTGGTAGACTTCTTAAAT+TGG | + | chr1_2:60955885-60955904 | Msa0082150:intron | 25.0% |
| ! | TACATTTATGGATGTTTAGA+AGG | + | chr1_2:60955948-60955967 | Msa0082150:intron | 25.0% |
| !! | AGTCAAGACTTCTTTTAAAT+AGG | + | chr1_2:60956030-60956049 | Msa0082150:intron | 25.0% |
| ! | GTAAACATCAATAATTCATG+TGG | - | chr1_2:60956729-60956748 | None:intergenic | 25.0% |
| ! | TTGGTTAATCTATAACTCAA+CGG | + | chr1_2:60956869-60956888 | Msa0082150:intron | 25.0% |
| ! | TTAGTGAATGTTTGTGATAT+TGG | + | chr1_2:60957111-60957130 | Msa0082150:intron | 25.0% |
| ! | TAGTGAATGTTTGTGATATT+GGG | + | chr1_2:60957112-60957131 | Msa0082150:intron | 25.0% |
| ! | TATTGCCTCATTCTATATTT+AGG | + | chr1_2:60957334-60957353 | Msa0082150:intron | 25.0% |
| ! | ATTCTCCTAAATATAGAATG+AGG | - | chr1_2:60957342-60957361 | None:intergenic | 25.0% |
| !!! | TTTTTTACCATGAAGTTAAC+TGG | + | chr1_2:60957398-60957417 | Msa0082150:intron | 25.0% |
| !! | TGATGTTAGTTTCACTATAT+CGG | + | chr1_2:60957470-60957489 | Msa0082150:intron | 25.0% |
| ! | ATAATTCACTGAAAACTTAC+TGG | - | chr1_2:60957573-60957592 | None:intergenic | 25.0% |
| !! | TTTTCTGTATATTGTTTCAC+AGG | + | chr1_2:60957642-60957661 | Msa0082150:intron | 25.0% |
| ! | TTCATGATGTACCAAATATT+TGG | + | chr1_2:60957683-60957702 | Msa0082150:CDS | 25.0% |
| ! | TAAAAATAGCCAAGATACAA+TGG | - | chr1_2:60957755-60957774 | None:intergenic | 25.0% |
| ! | CAACAATATTGTAATAAGAG+AGG | - | chr1_2:60957960-60957979 | None:intergenic | 25.0% |
| !!! | TTTTTTCATCAATTAAGGCA+AGG | - | chr1_2:60958011-60958030 | None:intergenic | 25.0% |
| !!! | CATTTTGAAATTTACAGGTT+AGG | + | chr1_2:60958638-60958657 | Msa0082150:intron | 25.0% |
| ! | CAGGATATCAATATATGTTA+TGG | + | chr1_2:60958757-60958776 | Msa0082150:intron | 25.0% |
| ! | TTAAAACTGCTATCACTTAT+TGG | + | chr1_2:60958941-60958960 | Msa0082150:intron | 25.0% |
| !! | CTAGAAGCACATATAATTTA+TGG | + | chr1_2:60959379-60959398 | Msa0082150:intron | 25.0% |
| ! | AAGTTTAGTCTATTCTATCT+AGG | + | chr1_2:60959402-60959421 | Msa0082150:intron | 25.0% |
| ! | ATCACATAACTAAAATCTGA+AGG | - | chr1_2:60959441-60959460 | None:intergenic | 25.0% |
| ! | TCATAGATATTAAAGCAATG+GGG | - | chr1_2:60959516-60959535 | None:intergenic | 25.0% |
| ! | GATCATAGATATTAAAGCAA+TGG | - | chr1_2:60959518-60959537 | None:intergenic | 25.0% |
| ! | GGATTTCTTAGAATTTAGAT+CGG | + | chr1_2:60959566-60959585 | Msa0082150:intron | 25.0% |
| ! | GATTTCTTAGAATTTAGATC+GGG | + | chr1_2:60959567-60959586 | Msa0082150:intron | 25.0% |
| !!! | TGTTTACAAGTCAGTTTTTT+AGG | - | chr1_2:60959603-60959622 | None:intergenic | 25.0% |
| ! | TTTGTACTGTATTAATCATG+TGG | - | chr1_2:60959845-60959864 | None:intergenic | 25.0% |
| ! | CTGTAATGACAATATTTGTT+TGG | + | chr1_2:60959887-60959906 | Msa0082150:intron | 25.0% |
| ! | GTAATGACAATATTTGTTTG+GGG | + | chr1_2:60959889-60959908 | Msa0082150:intron | 25.0% |
| ! | ATGAAAATTACAACAGGATT+TGG | - | chr1_2:60960214-60960233 | None:intergenic | 25.0% |
| ! | AAACACACCAATAGTTATTA+GGG | - | chr1_2:60960793-60960812 | None:intergenic | 25.0% |
| ! | GTGTATACAACATTAATTAG+AGG | + | chr1_2:60960843-60960862 | Msa0082150:intron | 25.0% |
| ! | TATTGCATTTCAAATGTGAT+TGG | + | chr1_2:60960963-60960982 | Msa0082150:intron | 25.0% |
| ! | ATTGCATTTCAAATGTGATT+GGG | + | chr1_2:60960964-60960983 | Msa0082150:intron | 25.0% |
| ! | ATAAAAAAATTCCACAACAC+AGG | - | chr1_2:60961460-60961479 | None:intergenic | 25.0% |
| ! | ATCAATTGAAGAATATATGG+AGG | - | chr1_2:60961502-60961521 | None:intergenic | 25.0% |
| ! | GTTGTATTATACTGTTTAGT+TGG | + | chr1_2:60961535-60961554 | Msa0082150:intron | 25.0% |
| ! | AACAGATGAAGATATTAACA+TGG | - | chr1_2:60961610-60961629 | None:intergenic | 25.0% |
| !!! | TAACCTTTGTTTTTAGTTAC+TGG | + | chr1_2:60961701-60961720 | Msa0082150:intron | 25.0% |
| !!! | ATTTAGTATTGACATTGTTC+AGG | + | chr1_2:60961758-60961777 | Msa0082150:intron | 25.0% |
| !! | TCTAAAGTTTCAATAACATC+CGG | - | chr1_2:60961789-60961808 | None:intergenic | 25.0% |
| ! | TTAATATTGTGAGATGAAGA+TGG | + | chr1_2:60962237-60962256 | Msa0082150:intron | 25.0% |
| ! | TTATAAGCATCAATTCACAT+GGG | - | chr1_2:60962352-60962371 | None:intergenic | 25.0% |
| ! | ATTATAAGCATCAATTCACA+TGG | - | chr1_2:60962353-60962372 | None:intergenic | 25.0% |
| ! | GAGTAGAAATAATTGAAACA+GGG | - | chr1_2:60962446-60962465 | None:intergenic | 25.0% |
| !! | AAGGTAAATTGATTCTCTTT+AGG | + | chr1_2:60962612-60962631 | Msa0082150:intron | 25.0% |
| !! | AGGTAAATTGATTCTCTTTA+GGG | + | chr1_2:60962613-60962632 | Msa0082150:intron | 25.0% |
| !! | TTCTCTTTAGGGAAAATAAT+TGG | + | chr1_2:60962624-60962643 | Msa0082150:intron | 25.0% |
| !! | TCTCTTTAGGGAAAATAATT+GGG | + | chr1_2:60962625-60962644 | Msa0082150:intron | 25.0% |
| ! | ATTATAAATCTCAGAACTTC+TGG | - | chr1_2:60962809-60962828 | None:intergenic | 25.0% |
| ! | TTAGTAATAGAGATGCTAAA+AGG | + | chr1_2:60962847-60962866 | Msa0082150:intron | 25.0% |
| !! | ACTGGTATTGAAAACAATTA+CGG | + | chr1_2:60962878-60962897 | Msa0082150:intron | 25.0% |
| !!! | TACTTCATATTTTTGGGTTG+GGG | - | chr1_2:60954067-60954086 | None:intergenic | 30.0% |
| !!! | GTACTTCATATTTTTGGGTT+GGG | - | chr1_2:60954068-60954087 | None:intergenic | 30.0% |
| ! | GAGAACGTACTTCATATTTT+TGG | - | chr1_2:60954074-60954093 | None:intergenic | 30.0% |
| AAAACTTCTCCATGTTCAAA+AGG | - | chr1_2:60954320-60954339 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTGTTCTTGATGA+TGG | + | chr1_2:60954332-60954351 | Msa0082150:CDS | 30.0% |
| ACTTCGTACAAGTGTATTTA+TGG | - | chr1_2:60954385-60954404 | None:intergenic | 30.0% | |
| TCTTGATGTTACACTTACAA+AGG | + | chr1_2:60954517-60954536 | Msa0082150:CDS | 30.0% | |
| TACTACTGGGAAAATATATC+AGG | + | chr1_2:60954550-60954569 | Msa0082150:CDS | 30.0% | |
| GTTAACTGATTGCTGAATAA+TGG | + | chr1_2:60954755-60954774 | Msa0082150:intron | 30.0% | |
| ! | GTTGGGATTTTTGATGAAAT+AGG | + | chr1_2:60954816-60954835 | Msa0082150:intron | 30.0% |
| TTATGCTCTTTCATAATCGA+TGG | - | chr1_2:60955018-60955037 | None:intergenic | 30.0% | |
| AGTAGTTAAAACGTGTACAT+GGG | - | chr1_2:60955176-60955195 | None:intergenic | 30.0% | |
| TAGTAGTTAAAACGTGTACA+TGG | - | chr1_2:60955177-60955196 | None:intergenic | 30.0% | |
| !!! | TACACGTTTTAACTACTACA+TGG | + | chr1_2:60955179-60955198 | Msa0082150:intron | 30.0% |
| AAGTTATTGACCAATACATC+TGG | + | chr1_2:60955664-60955683 | Msa0082150:intron | 30.0% | |
| AGTTATTGACCAATACATCT+GGG | + | chr1_2:60955665-60955684 | Msa0082150:intron | 30.0% | |
| GAAATAAAATGCACCCAAAA+AGG | + | chr1_2:60955759-60955778 | Msa0082150:intron | 30.0% | |
| !!! | TAAAAGCATCAAGCCTTTTT+GGG | - | chr1_2:60955775-60955794 | None:intergenic | 30.0% |
| !!! | ATAAAAGCATCAAGCCTTTT+TGG | - | chr1_2:60955776-60955795 | None:intergenic | 30.0% |
| ! | TTTTCTCTCCTTTAGTGTAT+CGG | - | chr1_2:60955841-60955860 | None:intergenic | 30.0% |
| AAATTGGTAGAACTATCTCT+TGG | + | chr1_2:60955901-60955920 | Msa0082150:intron | 30.0% | |
| !! | TTGATATTATGGCATTGGTT+TGG | + | chr1_2:60956069-60956088 | Msa0082150:intron | 30.0% |
| !! | TGATATTATGGCATTGGTTT+GGG | + | chr1_2:60956070-60956089 | Msa0082150:intron | 30.0% |
| TGGTTAATCTATAACTCAAC+GGG | + | chr1_2:60956870-60956889 | Msa0082150:intron | 30.0% | |
| ! | GAGGCAATAATCCTTTAAAA+AGG | - | chr1_2:60957323-60957342 | None:intergenic | 30.0% |
| CTATATTTAGGAGAATACAG+TGG | + | chr1_2:60957346-60957365 | Msa0082150:intron | 30.0% | |
| ATAATCTCCAGTTAACTTCA+TGG | - | chr1_2:60957408-60957427 | None:intergenic | 30.0% | |
| ! | AAACTGTGAAAGTTTTTCCT+TGG | - | chr1_2:60957541-60957560 | None:intergenic | 30.0% |
| ! | AGTTTTCAGTGAATTATGCT+TGG | + | chr1_2:60957576-60957595 | Msa0082150:intron | 30.0% |
| !! | TTTTTAGTGCCATTGTATCT+TGG | + | chr1_2:60957743-60957762 | Msa0082150:intron | 30.0% |
| ! | ATTGTTTTCCTCTTAATGTC+CGG | + | chr1_2:60957784-60957803 | Msa0082150:intron | 30.0% |
| ! | TTGATTCTGAAAATAGAAGC+CGG | - | chr1_2:60957806-60957825 | None:intergenic | 30.0% |
| !! | AGATAAACTCAAGTTGACAA+CGG | - | chr1_2:60958133-60958152 | None:intergenic | 30.0% |
| CATATGTTGGAATCTCTTAA+TGG | + | chr1_2:60958307-60958326 | Msa0082150:intron | 30.0% | |
| AATTGAAACACGTCATATGT+TGG | + | chr1_2:60958358-60958377 | Msa0082150:intron | 30.0% | |
| !!! | CAGAGCATTTTGAAATTTAC+AGG | + | chr1_2:60958633-60958652 | Msa0082150:intron | 30.0% |
| GTTCTTGGGATAAATATCAA+GGG | - | chr1_2:60958735-60958754 | None:intergenic | 30.0% | |
| TGTTCTTGGGATAAATATCA+AGG | - | chr1_2:60958736-60958755 | None:intergenic | 30.0% | |
| ! | TGAATATGGCATCAAACTTT+TGG | - | chr1_2:60958884-60958903 | None:intergenic | 30.0% |
| CAGATTATTGCTAGTGAATA+TGG | - | chr1_2:60958898-60958917 | None:intergenic | 30.0% | |
| TCTATTCTATCTAGGAAGTT+TGG | + | chr1_2:60959410-60959429 | Msa0082150:intron | 30.0% | |
| TGGACTTTCTGTGATAAAAT+TGG | + | chr1_2:60959545-60959564 | Msa0082150:intron | 30.0% | |
| ! | TATCTAGAGTGTGATCTTAT+TGG | + | chr1_2:60959694-60959713 | Msa0082150:intron | 30.0% |
| ! | TGATCTTATTGGCCTAATAA+TGG | + | chr1_2:60959705-60959724 | Msa0082150:intron | 30.0% |
| ! | GATCTTATTGGCCTAATAAT+GGG | + | chr1_2:60959706-60959725 | Msa0082150:intron | 30.0% |
| GTAAATACTACTATCCAATG+TGG | + | chr1_2:60959813-60959832 | Msa0082150:intron | 30.0% | |
| CACAACAAGGATAATGATTA+GGG | - | chr1_2:60960277-60960296 | None:intergenic | 30.0% | |
| TCACAACAAGGATAATGATT+AGG | - | chr1_2:60960278-60960297 | None:intergenic | 30.0% | |
| ATATGGCTTATTCTGTGAAA+GGG | - | chr1_2:60960482-60960501 | None:intergenic | 30.0% | |
| AATATGGCTTATTCTGTGAA+AGG | - | chr1_2:60960483-60960502 | None:intergenic | 30.0% | |
| TATCTGATGGGAAAGAAATA+TGG | - | chr1_2:60960499-60960518 | None:intergenic | 30.0% | |
| ! | AAATCTCAGTTTTCTTGTTC+TGG | + | chr1_2:60960556-60960575 | Msa0082150:intron | 30.0% |
| ! | AATCTCAGTTTTCTTGTTCT+GGG | + | chr1_2:60960557-60960576 | Msa0082150:intron | 30.0% |
| TACATAAAATGATTCCCTGA+TGG | - | chr1_2:60960635-60960654 | None:intergenic | 30.0% | |
| ATCACAGAACATAATGAATC+AGG | - | chr1_2:60960671-60960690 | None:intergenic | 30.0% | |
| TTAGGGGTAGTTTAGTAAAA+GGG | - | chr1_2:60960776-60960795 | None:intergenic | 30.0% | |
| ATTAGGGGTAGTTTAGTAAA+AGG | - | chr1_2:60960777-60960796 | None:intergenic | 30.0% | |
| AAACTACCCCTAATAACTAT+TGG | + | chr1_2:60960783-60960802 | Msa0082150:intron | 30.0% | |
| AACACACCAATAGTTATTAG+GGG | - | chr1_2:60960792-60960811 | None:intergenic | 30.0% | |
| GAAACACACCAATAGTTATT+AGG | - | chr1_2:60960794-60960813 | None:intergenic | 30.0% | |
| !!! | CTGAGACACTTATTTTGAAA+CGG | + | chr1_2:60960934-60960953 | Msa0082150:intron | 30.0% |
| ATTCTTCCTTACTGTAGATA+AGG | + | chr1_2:60960998-60961017 | Msa0082150:intron | 30.0% | |
| TTCTTCCTTACTGTAGATAA+GGG | + | chr1_2:60960999-60961018 | Msa0082150:intron | 30.0% | |
| !!! | TTCTTTTTTCACCTTTTGCT+AGG | - | chr1_2:60961104-60961123 | None:intergenic | 30.0% |
| GAGGTAGTAGTAAATTCTTT+AGG | - | chr1_2:60961166-60961185 | None:intergenic | 30.0% | |
| ! | AAGTAATTTTCTCTCCTGAA+GGG | - | chr1_2:60961271-60961290 | None:intergenic | 30.0% |
| ! | TAAGTAATTTTCTCTCCTGA+AGG | - | chr1_2:60961272-60961291 | None:intergenic | 30.0% |
| GAGTATTTATTACAGATTGC+AGG | + | chr1_2:60961304-60961323 | Msa0082150:intron | 30.0% | |
| GATGTCGTTGAAAATTTGAA+TGG | + | chr1_2:60961371-60961390 | Msa0082150:intron | 30.0% | |
| ! | TTGAATGGAGTCTTATAAGA+AGG | + | chr1_2:60961386-60961405 | Msa0082150:intron | 30.0% |
| ! | TGAATGGAGTCTTATAAGAA+GGG | + | chr1_2:60961387-60961406 | Msa0082150:intron | 30.0% |
| ! | AAGAAGGGGAAATGATATTT+TGG | + | chr1_2:60961402-60961421 | Msa0082150:intron | 30.0% |
| !!! | GAAATGATATTTTGGAACTG+AGG | + | chr1_2:60961410-60961429 | Msa0082150:intron | 30.0% |
| TATAATGAAAACCTGTGTTG+TGG | + | chr1_2:60961446-60961465 | Msa0082150:intron | 30.0% | |
| CAGTATAATACAACACACAA+AGG | - | chr1_2:60961529-60961548 | None:intergenic | 30.0% | |
| CATCCAGTAACTAAAAACAA+AGG | - | chr1_2:60961707-60961726 | None:intergenic | 30.0% | |
| ! | ATTGAAACTTTAGAAGAAGC+TGG | + | chr1_2:60961795-60961814 | Msa0082150:CDS | 30.0% |
| ! | TTGAAACTTTAGAAGAAGCT+GGG | + | chr1_2:60961796-60961815 | Msa0082150:CDS | 30.0% |
| ! | TATATTTTCCTGCTTGGATA+GGG | + | chr1_2:60961862-60961881 | Msa0082150:intron | 30.0% |
| ! | GGTACTTTTCAGTTATGAAT+TGG | + | chr1_2:60962151-60962170 | Msa0082150:intron | 30.0% |
| ATTAACACAGATGGTGTAAA+CGG | - | chr1_2:60962222-60962241 | None:intergenic | 30.0% | |
| TCTCACAATATTAACACAGA+TGG | - | chr1_2:60962231-60962250 | None:intergenic | 30.0% | |
| ATCAATTCACATGGGAATTT+CGG | - | chr1_2:60962344-60962363 | None:intergenic | 30.0% | |
| CGAGTAGAAATAATTGAAAC+AGG | - | chr1_2:60962447-60962466 | None:intergenic | 30.0% | |
| GATCTACGATTCTTTACTAT+AGG | + | chr1_2:60962566-60962585 | Msa0082150:exon | 30.0% | |
| AAGCTATACAACTAAGGAAA+AGG | - | chr1_2:60963005-60963024 | None:intergenic | 30.0% | |
| ! | TAAATCAGAAGGCATGATAT+TGG | - | chr1_2:60963043-60963062 | None:intergenic | 30.0% |
| TGATTGTTTGATGTGTATAG+AGG | + | chr1_2:60963118-60963137 | Msa0082150:three_prime_UTR | 30.0% | |
| AAATTAACTCGCTTATAGTG+TGG | - | chr1_2:60963173-60963192 | None:intergenic | 30.0% | |
| TTAGCGAGCATAAAAAGAAA+AGG | - | chr1_2:60963304-60963323 | None:intergenic | 30.0% | |
| ! | TCTTTTTATGCTCGCTAATT+AGG | + | chr1_2:60963306-60963325 | Msa0082150:three_prime_UTR | 30.0% |
| TACTTAGTCACTCATTATGA+AGG | + | chr1_2:60963408-60963427 | Msa0082150:three_prime_UTR | 30.0% | |
| TGTTTGTGTTTATATCCGAG+CGG | - | chr1_2:60954018-60954037 | None:intergenic | 35.0% | |
| GGAATGAATGAATGAGTTGT+AGG | - | chr1_2:60954046-60954065 | None:intergenic | 35.0% | |
| !!! | CGTACTTCATATTTTTGGGT+TGG | - | chr1_2:60954069-60954088 | None:intergenic | 35.0% |
| !!! | GTTTTTGTTCTTGATGATGG+CGG | + | chr1_2:60954335-60954354 | Msa0082150:CDS | 35.0% |
| TTATCTCGGAAAAACTGTTC+AGG | + | chr1_2:60954696-60954715 | Msa0082150:CDS | 35.0% | |
| AGATGAAGTTTCTGAGTTGT+TGG | + | chr1_2:60954798-60954817 | Msa0082150:intron | 35.0% | |
| GATGAAGTTTCTGAGTTGTT+GGG | + | chr1_2:60954799-60954818 | Msa0082150:intron | 35.0% | |
| ! | GGGATTTTTGATGAAATAGG+TGG | + | chr1_2:60954819-60954838 | Msa0082150:intron | 35.0% |
| AATCCAGTTTCTGATTGCAT+CGG | - | chr1_2:60954857-60954876 | None:intergenic | 35.0% | |
| AATCAGAAACTGGATTGAGT+CGG | + | chr1_2:60954861-60954880 | Msa0082150:CDS | 35.0% | |
| GTAGTTAAAACGTGTACATG+GGG | - | chr1_2:60955175-60955194 | None:intergenic | 35.0% | |
| AAGTCATATCCCAGATGTAT+TGG | - | chr1_2:60955677-60955696 | None:intergenic | 35.0% | |
| GGATATGACTTTGATACTTC+AGG | + | chr1_2:60955686-60955705 | Msa0082150:intron | 35.0% | |
| GATACTTCAGGATACACTAT+TGG | + | chr1_2:60955698-60955717 | Msa0082150:intron | 35.0% | |
| AAAGATGACCGATACACTAA+AGG | + | chr1_2:60955830-60955849 | Msa0082150:intron | 35.0% | |
| GATACACTAAAGGAGAGAAA+AGG | + | chr1_2:60955840-60955859 | Msa0082150:intron | 35.0% | |
| TTTATGGATGTTTAGAAGGC+TGG | + | chr1_2:60955952-60955971 | Msa0082150:intron | 35.0% | |
| ! | TACGATCACTAGTTTCTCTT+TGG | + | chr1_2:60956168-60956187 | Msa0082150:intron | 35.0% |
| TACTCTCATTATTCCTTCTC+AGG | + | chr1_2:60956322-60956341 | Msa0082150:intron | 35.0% | |
| ACTCTCATTATTCCTTCTCA+GGG | + | chr1_2:60956323-60956342 | Msa0082150:intron | 35.0% | |
| AGGTATATTATTGCACCAGT+TGG | + | chr1_2:60956573-60956592 | Msa0082150:intron | 35.0% | |
| GTACTACAACCTAAAGACTT+TGG | - | chr1_2:60956641-60956660 | None:intergenic | 35.0% | |
| TTACCACAGTTACGAAATTC+AGG | + | chr1_2:60956745-60956764 | Msa0082150:intron | 35.0% | |
| !! | CTTTAAAGTCGCATAGACTT+AGG | - | chr1_2:60956849-60956868 | None:intergenic | 35.0% |
| !! | AGTCTATGCGACTTTAAAGT+TGG | + | chr1_2:60956850-60956869 | Msa0082150:intron | 35.0% |
| !!! | GTTCACTGCAGTGTTTTAAT+AGG | - | chr1_2:60957050-60957069 | None:intergenic | 35.0% |
| ACTGCAGTGAACTTTAGTAA+GGG | + | chr1_2:60957058-60957077 | Msa0082150:intron | 35.0% | |
| ACTTTAGTAAGGGTAATGCT+AGG | + | chr1_2:60957068-60957087 | Msa0082150:intron | 35.0% | |
| ACCAAGAAACCAAATTTCCT+CGG | - | chr1_2:60957143-60957162 | None:intergenic | 35.0% | |
| ATTGTGGTTGTTAAGACCAA+AGG | + | chr1_2:60957177-60957196 | Msa0082150:intron | 35.0% | |
| TTGTGGTTGTTAAGACCAAA+GGG | + | chr1_2:60957178-60957197 | Msa0082150:intron | 35.0% | |
| AAGCTACTTATGTGCTTATG+TGG | + | chr1_2:60957224-60957243 | Msa0082150:intron | 35.0% | |
| TTTGACAACTTATGTGACAC+TGG | + | chr1_2:60957248-60957267 | Msa0082150:intron | 35.0% | |
| TTGCTTCTCCAATGAGATTA+TGG | + | chr1_2:60957279-60957298 | Msa0082150:intron | 35.0% | |
| TTGTCAGACCATAATCTCAT+TGG | - | chr1_2:60957290-60957309 | None:intergenic | 35.0% | |
| ! | ATCAAGCGACTCCTTTTTAA+AGG | + | chr1_2:60957309-60957328 | Msa0082150:intron | 35.0% |
| ACTGAAAACTTACTGGAACA+TGG | - | chr1_2:60957566-60957585 | None:intergenic | 35.0% | |
| AGGGGAATATGCCAAATATT+TGG | - | chr1_2:60957697-60957716 | None:intergenic | 35.0% | |
| TAAGCTGCTGTAAAATTGAG+TGG | - | chr1_2:60957837-60957856 | None:intergenic | 35.0% | |
| TACAGCAGCTTAACTTACTT+AGG | + | chr1_2:60957845-60957864 | Msa0082150:CDS | 35.0% | |
| !! | GATAAACTCAAGTTGACAAC+GGG | - | chr1_2:60958132-60958151 | None:intergenic | 35.0% |
| ! | TAGCATAAGCACAAGTCTTT+TGG | + | chr1_2:60958182-60958201 | Msa0082150:intron | 35.0% |
| !!! | AAGCACAAGTCTTTTGGTTT+TGG | + | chr1_2:60958188-60958207 | Msa0082150:intron | 35.0% |
| !!! | AGCACAAGTCTTTTGGTTTT+GGG | + | chr1_2:60958189-60958208 | Msa0082150:intron | 35.0% |
| GTCATATGTTGGTCATACTT+GGG | + | chr1_2:60958369-60958388 | Msa0082150:intron | 35.0% | |
| TAGTACTAACAGATTCAGTG+AGG | - | chr1_2:60958556-60958575 | None:intergenic | 35.0% | |
| ATATTTATCCCAAGAACAGC+AGG | + | chr1_2:60958738-60958757 | Msa0082150:intron | 35.0% | |
| ATTGATATCCTGCTGTTCTT+GGG | - | chr1_2:60958749-60958768 | None:intergenic | 35.0% | |
| TATTGATATCCTGCTGTTCT+TGG | - | chr1_2:60958750-60958769 | None:intergenic | 35.0% | |
| CTGCCGAATATCAACATATT+TGG | + | chr1_2:60959007-60959026 | Msa0082150:intron | 35.0% | |
| TTGGTTTCTTCTCATTATGC+AGG | + | chr1_2:60959264-60959283 | Msa0082150:intron | 35.0% | |
| AATATCTATGATCGAACAGC+TGG | + | chr1_2:60959525-60959544 | Msa0082150:intron | 35.0% | |
| TAGATAGCCAGTAACGTAAA+GGG | - | chr1_2:60959680-60959699 | None:intergenic | 35.0% | |
| ATTGTTCTCTCTGGCATATT+TGG | - | chr1_2:60959997-60960016 | None:intergenic | 35.0% | |
| AGAGAACAATGTTCCTTACT+TGG | + | chr1_2:60960007-60960026 | Msa0082150:CDS | 35.0% | |
| GAGAACAATGTTCCTTACTT+GGG | + | chr1_2:60960008-60960027 | Msa0082150:CDS | 35.0% | |
| AGAACAATGTTCCTTACTTG+GGG | + | chr1_2:60960009-60960028 | Msa0082150:CDS | 35.0% | |
| !! | TACAACAGGATTTGGTGTTT+GGG | - | chr1_2:60960206-60960225 | None:intergenic | 35.0% |
| !! | TTACAACAGGATTTGGTGTT+TGG | - | chr1_2:60960207-60960226 | None:intergenic | 35.0% |
| TCTGGCATGAAAATTACAAC+AGG | - | chr1_2:60960220-60960239 | None:intergenic | 35.0% | |
| ! | TGTTGTAATTTTCATGCCAG+AGG | + | chr1_2:60960219-60960238 | Msa0082150:CDS | 35.0% |
| GATAATGATTAGGGAAACTG+GGG | - | chr1_2:60960268-60960287 | None:intergenic | 35.0% | |
| GGATAATGATTAGGGAAACT+GGG | - | chr1_2:60960269-60960288 | None:intergenic | 35.0% | |
| AGGATAATGATTAGGGAAAC+TGG | - | chr1_2:60960270-60960289 | None:intergenic | 35.0% | |
| TAGCTACATCACATACAGTT+TGG | - | chr1_2:60960400-60960419 | None:intergenic | 35.0% | |
| CTGAATGACACATGTCAATA+AGG | + | chr1_2:60960594-60960613 | Msa0082150:intron | 35.0% | |
| !!! | AAACGACACTCGTTTTGAAA+CGG | - | chr1_2:60960701-60960720 | None:intergenic | 35.0% |
| !! | TTCAAAACGAGTGTCGTTTA+AGG | + | chr1_2:60960702-60960721 | Msa0082150:intron | 35.0% |
| TCTTCCTTACTGTAGATAAG+GGG | + | chr1_2:60961000-60961019 | Msa0082150:intron | 35.0% | |
| ! | TTTTCACCTTTTGCTAGGAA+GGG | - | chr1_2:60961099-60961118 | None:intergenic | 35.0% |
| ! | TTTTTCACCTTTTGCTAGGA+AGG | - | chr1_2:60961100-60961119 | None:intergenic | 35.0% |
| ! | GGTCTTATATTTAGAGACAG+AGG | - | chr1_2:60961185-60961204 | None:intergenic | 35.0% |
| ATCTCTTGATTTACTCGATG+TGG | - | chr1_2:60961206-60961225 | None:intergenic | 35.0% | |
| ! | GAATGGAGTCTTATAAGAAG+GGG | + | chr1_2:60961388-60961407 | Msa0082150:intron | 35.0% |
| ! | TTTGGAACTGAGGTAGTATA+TGG | + | chr1_2:60961420-60961439 | Msa0082150:intron | 35.0% |
| TTCATCTGTTCCTAATTACC+AGG | + | chr1_2:60961620-60961639 | Msa0082150:intron | 35.0% | |
| AATTGCCATACCTGGTAATT+AGG | - | chr1_2:60961633-60961652 | None:intergenic | 35.0% | |
| AATTACCAGGTATGGCAATT+CGG | + | chr1_2:60961633-60961652 | Msa0082150:intron | 35.0% | |
| TGACATTGTTCAGGTAAATC+CGG | + | chr1_2:60961767-60961786 | Msa0082150:intron | 35.0% | |
| ! | GTATATTTTCCTGCTTGGAT+AGG | + | chr1_2:60961861-60961880 | Msa0082150:intron | 35.0% |
| GCACAAGAGAGAATTTCTTA+AGG | - | chr1_2:60962036-60962055 | None:intergenic | 35.0% | |
| CCTACATAATATGGATGACT+TGG | - | chr1_2:60962073-60962092 | None:intergenic | 35.0% | |
| CCAAGTCATCCATATTATGT+AGG | + | chr1_2:60962070-60962089 | Msa0082150:CDS | 35.0% | |
| AATTGCACGCCTACATAATA+TGG | - | chr1_2:60962082-60962101 | None:intergenic | 35.0% | |
| TTCATCCCGAATTCAAATCT+CGG | + | chr1_2:60962101-60962120 | Msa0082150:CDS | 35.0% | |
| !!! | AGACCATCTGCTTTGTTTTT+AGG | + | chr1_2:60962130-60962149 | Msa0082150:CDS | 35.0% |
| GTACCTAAAAACAAAGCAGA+TGG | - | chr1_2:60962136-60962155 | None:intergenic | 35.0% | |
| CAATATGAGACCTACAGTAT+AGG | - | chr1_2:60962491-60962510 | None:intergenic | 35.0% | |
| CTATACTGTAGGTCTCATAT+TGG | + | chr1_2:60962489-60962508 | Msa0082150:intron | 35.0% | |
| ATCACTAGCATTCATGAGAA+TGG | + | chr1_2:60962538-60962557 | Msa0082150:CDS | 35.0% | |
| CTGATTCATATCAGTCACAA+AGG | + | chr1_2:60962749-60962768 | Msa0082150:intron | 35.0% | |
| ! | ACTTCTGGTGATGAAATACA+TGG | - | chr1_2:60962794-60962813 | None:intergenic | 35.0% |
| TGCTAAAAGGTTGCAAATAC+TGG | + | chr1_2:60962860-60962879 | Msa0082150:intron | 35.0% | |
| GTTGTAACTTTGTCAAGCTA+AGG | + | chr1_2:60962909-60962928 | Msa0082150:intron | 35.0% | |
| ! | AGTGCTGAATTTATCAGCTA+AGG | - | chr1_2:60962948-60962967 | None:intergenic | 35.0% |
| CTGATAAATTCAGCACTTCT+TGG | + | chr1_2:60962951-60962970 | Msa0082150:intron | 35.0% | |
| CCATACTATTTAGCTAACTG+TGG | - | chr1_2:60962977-60962996 | None:intergenic | 35.0% | |
| CCACAGTTAGCTAAATAGTA+TGG | + | chr1_2:60962974-60962993 | Msa0082150:intron | 35.0% | |
| ATACAACTAAGGAAAAGGTC+TGG | - | chr1_2:60963000-60963019 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCGATCTTCATTGC+AGG | + | chr1_2:60963078-60963097 | Msa0082150:intron | 35.0% |
| !!! | AAGGTTGATATTTTGGTGGG+AGG | - | chr1_2:60953994-60954013 | None:intergenic | 40.0% |
| !!! | GGGAAGGTTGATATTTTGGT+GGG | - | chr1_2:60953997-60954016 | None:intergenic | 40.0% |
| AAAATATCAACCTTCCCGCT+CGG | + | chr1_2:60954000-60954019 | Msa0082150:five_prime_UTR | 40.0% | |
| GTTTGTGTTTATATCCGAGC+GGG | - | chr1_2:60954017-60954036 | None:intergenic | 40.0% | |
| ATGAAGTACGTTCTCATCTC+CGG | + | chr1_2:60954079-60954098 | Msa0082150:CDS | 40.0% | |
| !! | AGAGTGAGAACCGATTTTGA+TGG | - | chr1_2:60954188-60954207 | None:intergenic | 40.0% |
| AAACGGTGAATGATGCGAAA+CGG | - | chr1_2:60954239-60954258 | None:intergenic | 40.0% | |
| CCAGCGTCAATGTTCAAATA+CGG | - | chr1_2:60954287-60954306 | None:intergenic | 40.0% | |
| ! | ACCATGTCTCCTTTTGAACA+TGG | + | chr1_2:60954308-60954327 | Msa0082150:CDS | 40.0% |
| TCCATGTTCAAAAGGAGACA+TGG | - | chr1_2:60954312-60954331 | None:intergenic | 40.0% | |
| TTCTTAGTCTGTGCTTGAGA+AGG | + | chr1_2:60954660-60954679 | Msa0082150:intron | 40.0% | |
| CAATCACACAAACATCAGCA+GGG | - | chr1_2:60954918-60954937 | None:intergenic | 40.0% | |
| TCAATCACACAAACATCAGC+AGG | - | chr1_2:60954919-60954938 | None:intergenic | 40.0% | |
| GATGTTTGTGTGATTGAGCT+TGG | + | chr1_2:60954922-60954941 | Msa0082150:CDS | 40.0% | |
| ! | TGAGTCTATGCCGTTTATTG+AGG | + | chr1_2:60955067-60955086 | Msa0082150:CDS | 40.0% |
| ACGGCAATTATCCTTTCAAG+TGG | + | chr1_2:60955094-60955113 | Msa0082150:CDS | 40.0% | |
| ! | CGGCAATTATCCTTTCAAGT+GGG | + | chr1_2:60955095-60955114 | Msa0082150:CDS | 40.0% |
| CATTGTTCTCATGTGTGATG+AGG | + | chr1_2:60955220-60955239 | Msa0082150:intron | 40.0% | |
| CTCGCACTTACCTAAGTATT+TGG | - | chr1_2:60955401-60955420 | None:intergenic | 40.0% | |
| CTAAAGGAGAGAAAAGGTTG+CGG | + | chr1_2:60955846-60955865 | Msa0082150:intron | 40.0% | |
| TAAAGGAGAGAAAAGGTTGC+GGG | + | chr1_2:60955847-60955866 | Msa0082150:intron | 40.0% | |
| GGACATTCACTTGGTCATAT+TGG | + | chr1_2:60955868-60955887 | Msa0082150:intron | 40.0% | |
| ! | TAGAAGGCTGGTGATGAAAT+TGG | + | chr1_2:60955964-60955983 | Msa0082150:intron | 40.0% |
| CGAGACAAGATGACATTTCA+TGG | - | chr1_2:60956288-60956307 | None:intergenic | 40.0% | |
| ATGGTTGCTCCAAAGTCTTT+AGG | + | chr1_2:60956629-60956648 | Msa0082150:intron | 40.0% | |
| CACTGCAGTGAACTTTAGTA+AGG | + | chr1_2:60957057-60957076 | Msa0082150:intron | 40.0% | |
| TAGTAAGGGTAATGCTAGGA+TGG | + | chr1_2:60957072-60957091 | Msa0082150:intron | 40.0% | |
| AGTAAGGGTAATGCTAGGAT+GGG | + | chr1_2:60957073-60957092 | Msa0082150:intron | 40.0% | |
| GAAACCAAATTTCCTCGGTA+AGG | - | chr1_2:60957138-60957157 | None:intergenic | 40.0% | |
| ! | ACCGAGGAAATTTGGTTTCT+TGG | + | chr1_2:60957139-60957158 | Msa0082150:intron | 40.0% |
| TGTGGTTGTTAAGACCAAAG+GGG | + | chr1_2:60957179-60957198 | Msa0082150:intron | 40.0% | |
| AGACTCACTCTAAGTAACAG+GGG | - | chr1_2:60957715-60957734 | None:intergenic | 40.0% | |
| GAGACTCACTCTAAGTAACA+GGG | - | chr1_2:60957716-60957735 | None:intergenic | 40.0% | |
| AGAGACTCACTCTAAGTAAC+AGG | - | chr1_2:60957717-60957736 | None:intergenic | 40.0% | |
| AATAGAAGCCGGACATTAAG+AGG | - | chr1_2:60957795-60957814 | None:intergenic | 40.0% | |
| CTGCTGTAAAATTGAGTGGT+GGG | - | chr1_2:60957833-60957852 | None:intergenic | 40.0% | |
| TCAACGCACTCTTCATTGTT+GGG | - | chr1_2:60958046-60958065 | None:intergenic | 40.0% | |
| ATCAACGCACTCTTCATTGT+TGG | - | chr1_2:60958047-60958066 | None:intergenic | 40.0% | |
| !!! | GCACAAGTCTTTTGGTTTTG+GGG | + | chr1_2:60958190-60958209 | Msa0082150:intron | 40.0% |
| CGTCATATGTTGGTCATACT+TGG | + | chr1_2:60958368-60958387 | Msa0082150:intron | 40.0% | |
| TATGTTGGTCATACTTGGGA+AGG | + | chr1_2:60958373-60958392 | Msa0082150:intron | 40.0% | |
| TTTACAGGTTAGGATTGCCA+TGG | + | chr1_2:60958648-60958667 | Msa0082150:intron | 40.0% | |
| ! | ACCAACATATTTTCCCACCA+TGG | - | chr1_2:60958668-60958687 | None:intergenic | 40.0% |
| CATTGAGACCATCAATTGAC+TGG | + | chr1_2:60959168-60959187 | Msa0082150:CDS | 40.0% | |
| ATTGTGCACTGTCATCTTCA+AGG | - | chr1_2:60959208-60959227 | None:intergenic | 40.0% | |
| ! | TCTATCTAGGAAGTTTGGTG+AGG | + | chr1_2:60959415-60959434 | Msa0082150:intron | 40.0% |
| AAAAACCGTCTAGCACATAG+CGG | - | chr1_2:60959465-60959484 | None:intergenic | 40.0% | |
| CTAGATAGCCAGTAACGTAA+AGG | - | chr1_2:60959681-60959700 | None:intergenic | 40.0% | |
| ! | CTTATTGGCCTAATAATGGG+TGG | + | chr1_2:60959709-60959728 | Msa0082150:intron | 40.0% |
| CCATAAGACCACCCATTATT+AGG | - | chr1_2:60959720-60959739 | None:intergenic | 40.0% | |
| !! | CCTAATAATGGGTGGTCTTA+TGG | + | chr1_2:60959717-60959736 | Msa0082150:intron | 40.0% |
| CCAATATTGTGAGATTGAGC+AGG | - | chr1_2:60959790-60959809 | None:intergenic | 40.0% | |
| CCTGCTCAATCTCACAATAT+TGG | + | chr1_2:60959787-60959806 | Msa0082150:intron | 40.0% | |
| GTAAGGAACATTGTTCTCTC+TGG | - | chr1_2:60960006-60960025 | None:intergenic | 40.0% | |
| !!! | TCTATTCTTAGGTTTTGGGC+TGG | + | chr1_2:60960152-60960171 | Msa0082150:intron | 40.0% |
| !!! | CTATTCTTAGGTTTTGGGCT+GGG | + | chr1_2:60960153-60960172 | Msa0082150:intron | 40.0% |
| GAAACAAGTATACGTACCTC+TGG | - | chr1_2:60960238-60960257 | None:intergenic | 40.0% | |
| ATGCCTGCTAGTCATAAACA+GGG | + | chr1_2:60960297-60960316 | Msa0082150:intron | 40.0% | |
| CTAGTCATAAACAGGGTTCT+AGG | + | chr1_2:60960304-60960323 | Msa0082150:intron | 40.0% | |
| GTCATTCAGAACAACCAGAT+AGG | - | chr1_2:60960583-60960602 | None:intergenic | 40.0% | |
| CACATGTCAATAAGGATGTC+TGG | + | chr1_2:60960602-60960621 | Msa0082150:intron | 40.0% | |
| GAAACCCCTTATCTACAGTA+AGG | - | chr1_2:60961007-60961026 | None:intergenic | 40.0% | |
| ACTGTAGATAAGGGGTTTCA+AGG | + | chr1_2:60961008-60961027 | Msa0082150:intron | 40.0% | |
| CTGTAGATAAGGGGTTTCAA+GGG | + | chr1_2:60961009-60961028 | Msa0082150:intron | 40.0% | |
| TGTTGAGAAGTTTACCCTTC+AGG | + | chr1_2:60961254-60961273 | Msa0082150:intron | 40.0% | |
| CTGTTCCTAATTACCAGGTA+TGG | + | chr1_2:60961625-60961644 | Msa0082150:intron | 40.0% | |
| ATTCGGAGTATGTGGATGAA+CGG | + | chr1_2:60961650-60961669 | Msa0082150:CDS | 40.0% | |
| CAGGTACTACACATGTTTGT+AGG | - | chr1_2:60961731-60961750 | None:intergenic | 40.0% | |
| GAAGCTGGGCTAAAATTTGT+TGG | + | chr1_2:60961810-60961829 | Msa0082150:CDS | 40.0% | |
| !! | TGGGCTAAAATTTGTTGGCA+GGG | + | chr1_2:60961815-60961834 | Msa0082150:CDS | 40.0% |
| !! | TGGAGGTATATTTTCCTGCT+TGG | + | chr1_2:60961856-60961875 | Msa0082150:intron | 40.0% |
| TATCAAAACCCTATCCAAGC+AGG | - | chr1_2:60961873-60961892 | None:intergenic | 40.0% | |
| ! | CAGGTTTTCAACTACAGTTC+TGG | - | chr1_2:60961900-60961919 | None:intergenic | 40.0% |
| CAGAACTGTAGTTGAAAACC+TGG | + | chr1_2:60961898-60961917 | Msa0082150:intron | 40.0% | |
| AACTGTAGTTGAAAACCTGG+CGG | + | chr1_2:60961901-60961920 | Msa0082150:intron | 40.0% | |
| TGAGATGAAGATGGTCTGTT+TGG | + | chr1_2:60962246-60962265 | Msa0082150:intron | 40.0% | |
| GCAAGCAATAACATGACATC+AGG | - | chr1_2:60962304-60962323 | None:intergenic | 40.0% | |
| ATTCACATGGGAATTTCGGT+AGG | - | chr1_2:60962340-60962359 | None:intergenic | 40.0% | |
| TACTGTAGGTCTCATATTGG+CGG | + | chr1_2:60962492-60962511 | Msa0082150:intron | 40.0% | |
| AGGGAAAATAATTGGGAGCA+AGG | + | chr1_2:60962632-60962651 | Msa0082150:intron | 40.0% | |
| GGGAAAATAATTGGGAGCAA+GGG | + | chr1_2:60962633-60962652 | Msa0082150:intron | 40.0% | |
| AATAATTGGGAGCAAGGGAA+TGG | + | chr1_2:60962638-60962657 | Msa0082150:intron | 40.0% | |
| ATAATTGGGAGCAAGGGAAT+GGG | + | chr1_2:60962639-60962658 | Msa0082150:intron | 40.0% | |
| TAGGAACTAGGAACTGAAGT+AGG | + | chr1_2:60962665-60962684 | Msa0082150:intron | 40.0% | |
| GTAACTTTGTCAAGCTAAGG+AGG | + | chr1_2:60962912-60962931 | Msa0082150:intron | 40.0% | |
| CACAGCAAGCTATACAACTA+AGG | - | chr1_2:60963011-60963030 | None:intergenic | 40.0% | |
| !! | CTTAGTTGTATAGCTTGCTG+TGG | + | chr1_2:60963009-60963028 | Msa0082150:intron | 40.0% |
| ATGTGTATAGAGGTCTGAAG+CGG | + | chr1_2:60963128-60963147 | Msa0082150:three_prime_UTR | 40.0% | |
| TTTATAAGCCTGTGAGTGTC+AGG | - | chr1_2:60963218-60963237 | None:intergenic | 40.0% | |
| !!! | CGGGAAGGTTGATATTTTGG+TGG | - | chr1_2:60953998-60954017 | None:intergenic | 45.0% |
| !!! | GAGCGGGAAGGTTGATATTT+TGG | - | chr1_2:60954001-60954020 | None:intergenic | 45.0% |
| !! | GTGAGAACCGATTTTGATGG+AGG | - | chr1_2:60954185-60954204 | None:intergenic | 45.0% |
| CGGTTACGAAGAAGTTGAGT+TGG | - | chr1_2:60954219-60954238 | None:intergenic | 45.0% | |
| CCGTATTTGAACATTGACGC+TGG | + | chr1_2:60954284-60954303 | Msa0082150:CDS | 45.0% | |
| ! | CTGATTGCATCGGTGATATG+CGG | - | chr1_2:60954847-60954866 | None:intergenic | 45.0% |
| TCACCGATGCAATCAGAAAC+TGG | + | chr1_2:60954851-60954870 | Msa0082150:CDS | 45.0% | |
| GGTCTTCATTTCCATCAACC+GGG | - | chr1_2:60954897-60954916 | None:intergenic | 45.0% | |
| GGGTCTTCATTTCCATCAAC+CGG | - | chr1_2:60954898-60954917 | None:intergenic | 45.0% | |
| GTTTGTGTGATTGAGCTTGG+AGG | + | chr1_2:60954925-60954944 | Msa0082150:CDS | 45.0% | |
| ! | TGCCGTTTATTGAGGCTCTA+CGG | + | chr1_2:60955075-60955094 | Msa0082150:CDS | 45.0% |
| TGCCGTAGAGCCTCAATAAA+CGG | - | chr1_2:60955080-60955099 | None:intergenic | 45.0% | |
| TGCTGTCATACCCACTTGAA+AGG | - | chr1_2:60955108-60955127 | None:intergenic | 45.0% | |
| CTTTCCTCGACAACAGTCAA+AGG | - | chr1_2:60955814-60955833 | None:intergenic | 45.0% | |
| TGGATGAGACAGAAGTTGTC+AGG | - | chr1_2:60956349-60956368 | None:intergenic | 45.0% | |
| ACACTGGTATCAGGCTAACA+TGG | - | chr1_2:60956369-60956388 | None:intergenic | 45.0% | |
| ! | TGTTAGCCTGATACCAGTGT+TGG | + | chr1_2:60956369-60956388 | Msa0082150:CDS | 45.0% |
| ! | GTTAGCCTGATACCAGTGTT+GGG | + | chr1_2:60956370-60956389 | Msa0082150:CDS | 45.0% |
| ! | ATACCAGTGTTGGGTGTAGT+GGG | + | chr1_2:60956379-60956398 | Msa0082150:CDS | 45.0% |
| !!! | GTTGTGTCGGCTTTGTTTTC+TGG | - | chr1_2:60956490-60956509 | None:intergenic | 45.0% |
| ! | TGTCAGGGAACTAAGAGCAT+TGG | + | chr1_2:60956514-60956533 | Msa0082150:CDS | 45.0% |
| !! | GTCAGGGAACTAAGAGCATT+GGG | + | chr1_2:60956515-60956534 | Msa0082150:CDS | 45.0% |
| !! | GAGCGACTTGCTAAAAGATG+AGG | - | chr1_2:60956548-60956567 | None:intergenic | 45.0% |
| AAATGCATCTAGGCACCAAC+TGG | - | chr1_2:60956591-60956610 | None:intergenic | 45.0% | |
| GAGCCTGAATTTCGTAACTG+TGG | - | chr1_2:60956751-60956770 | None:intergenic | 45.0% | |
| GCTGCTGTAAAATTGAGTGG+TGG | - | chr1_2:60957834-60957853 | None:intergenic | 45.0% | |
| !! | TTTGCGGCAATGGACTGATA+TGG | + | chr1_2:60958514-60958533 | Msa0082150:CDS | 45.0% |
| ! | GCCATGGTGGGAAAATATGT+TGG | + | chr1_2:60958664-60958683 | Msa0082150:CDS | 45.0% |
| TGCAACACAAGCATGCAGTA+GGG | - | chr1_2:60959144-60959163 | None:intergenic | 45.0% | |
| GCTGCAATCCAGTCAATTGA+TGG | - | chr1_2:60959179-60959198 | None:intergenic | 45.0% | |
| TTCTCATTATGCAGGCAGTC+AGG | + | chr1_2:60959272-60959291 | Msa0082150:intron | 45.0% | |
| AAAACCGTCTAGCACATAGC+GGG | - | chr1_2:60959464-60959483 | None:intergenic | 45.0% | |
| ! | GCTATGTGCTAGACGGTTTT+TGG | + | chr1_2:60959464-60959483 | Msa0082150:intron | 45.0% |
| ACACACACCCTTTACGTTAC+TGG | + | chr1_2:60959670-60959689 | Msa0082150:intron | 45.0% | |
| TCATGTGGAGAGATCCACAT+TGG | - | chr1_2:60959830-60959849 | None:intergenic | 45.0% | |
| ! | TCCTTACTTGGGGATTTGCT+TGG | + | chr1_2:60960019-60960038 | Msa0082150:CDS | 45.0% |
| ! | CCTTACTTGGGGATTTGCTT+GGG | + | chr1_2:60960020-60960039 | Msa0082150:CDS | 45.0% |
| AATGATTAGGGAAACTGGGG+AGG | - | chr1_2:60960265-60960284 | None:intergenic | 45.0% | |
| GATGCCTGCTAGTCATAAAC+AGG | + | chr1_2:60960296-60960315 | Msa0082150:intron | 45.0% | |
| GAACCCTGTTTATGACTAGC+AGG | - | chr1_2:60960303-60960322 | None:intergenic | 45.0% | |
| !! | ATGGGAAGTACCATGAGACT+TGG | + | chr1_2:60960333-60960352 | Msa0082150:CDS | 45.0% |
| TCTTCGAGATCCAAGTCTCA+TGG | - | chr1_2:60960346-60960365 | None:intergenic | 45.0% | |
| ! | TTTCTTGTTCTGGGCCTATC+TGG | + | chr1_2:60960566-60960585 | Msa0082150:intron | 45.0% |
| !!! | GACACTCGTTTTGAAACGGA+GGG | - | chr1_2:60960697-60960716 | None:intergenic | 45.0% |
| AGATAAGGGGTTTCAAGGGA+AGG | + | chr1_2:60961013-60961032 | Msa0082150:intron | 45.0% | |
| GATAAGGGGTTTCAAGGGAA+GGG | + | chr1_2:60961014-60961033 | Msa0082150:intron | 45.0% | |
| GGTTTCAAGGGAAGGGAAAT+GGG | + | chr1_2:60961021-60961040 | Msa0082150:intron | 45.0% | |
| GAAGGGAAATGGGAAAGGTT+TGG | + | chr1_2:60961031-60961050 | Msa0082150:intron | 45.0% | |
| ! | ACCTTTTGCTAGGAAGGGAA+GGG | - | chr1_2:60961094-60961113 | None:intergenic | 45.0% |
| ATACTCCGAATTGCCATACC+TGG | - | chr1_2:60961641-60961660 | None:intergenic | 45.0% | |
| GTATGGCAATTCGGAGTATG+TGG | + | chr1_2:60961642-60961661 | Msa0082150:CDS | 45.0% | |
| !! | CTGGGCTAAAATTTGTTGGC+AGG | + | chr1_2:60961814-60961833 | Msa0082150:CDS | 45.0% |
| TTTGTTGGCAGGGATGAAAG+CGG | + | chr1_2:60961825-60961844 | Msa0082150:CDS | 45.0% | |
| CATGTCTAATTGAAACCGCC+AGG | - | chr1_2:60961919-60961938 | None:intergenic | 45.0% | |
| CTGGCGGTTTCAATTAGACA+TGG | + | chr1_2:60961917-60961936 | Msa0082150:intron | 45.0% | |
| !! | CAACAACAAGAGTGCTGTGA+AGG | - | chr1_2:60962273-60962292 | None:intergenic | 45.0% |
| TGATGCTGCACCTATACTGT+AGG | + | chr1_2:60962478-60962497 | Msa0082150:intron | 45.0% | |
| GAACTAGGAACTGAAGTAGG+AGG | + | chr1_2:60962668-60962687 | Msa0082150:intron | 45.0% | |
| AGGAACTGAAGTAGGAGGAA+TGG | + | chr1_2:60962673-60962692 | Msa0082150:intron | 45.0% | |
| GGAACTGAAGTAGGAGGAAT+GGG | + | chr1_2:60962674-60962693 | Msa0082150:intron | 45.0% | |
| ! | ATCCAACCTAGAGAAGCATG+GGG | - | chr1_2:60962729-60962748 | None:intergenic | 45.0% |
| ! | GATCCAACCTAGAGAAGCAT+GGG | - | chr1_2:60962730-60962749 | None:intergenic | 45.0% |
| AGATCCAACCTAGAGAAGCA+TGG | - | chr1_2:60962731-60962750 | None:intergenic | 45.0% | |
| ACCATTAACCTGACACTCAC+AGG | + | chr1_2:60963207-60963226 | Msa0082150:three_prime_UTR | 45.0% | |
| !!! | AAAATAATTTCTAAAAAAAT+AGG | - | chr1_2:60955639-60955658 | None:intergenic | 5.0% |
| !!! | TATATTTTTCAATAAAAATA+TGG | - | chr1_2:60958428-60958447 | None:intergenic | 5.0% |
| !! | TTGAAAAATATATTAATAAT+TGG | + | chr1_2:60958436-60958455 | Msa0082150:intron | 5.0% |
| !!! | TTTCTAAAAAAATTAAAAAA+AGG | + | chr1_2:60959045-60959064 | Msa0082150:intron | 5.0% |
| !!! | TTCTAAAAAAATTAAAAAAA+GGG | + | chr1_2:60959046-60959065 | Msa0082150:intron | 5.0% |
| GTGTTTATATCCGAGCGGGA+AGG | - | chr1_2:60954013-60954032 | None:intergenic | 50.0% | |
| AAGTACGTTCTCATCTCCGG+CGG | + | chr1_2:60954082-60954101 | Msa0082150:CDS | 50.0% | |
| !! | CGATTTTGATGGAGGTGACG+CGG | - | chr1_2:60954177-60954196 | None:intergenic | 50.0% |
| CGCGTCACCTCCATCAAAAT+CGG | + | chr1_2:60954175-60954194 | Msa0082150:CDS | 50.0% | |
| !! | TGTTCTTGATGATGGCGGAG+AGG | + | chr1_2:60954340-60954359 | Msa0082150:CDS | 50.0% |
| GAGCGCAAGGGAGATTATCT+CGG | + | chr1_2:60954682-60954701 | Msa0082150:CDS | 50.0% | |
| !! | ATTGAGCTTGGAGGCACTGT+GGG | + | chr1_2:60954934-60954953 | Msa0082150:CDS | 50.0% |
| CCTCGACAACAGTCAAAGGA+TGG | - | chr1_2:60955810-60955829 | None:intergenic | 50.0% | |
| CCATCCTTTGACTGTTGTCG+AGG | + | chr1_2:60955807-60955826 | Msa0082150:intron | 50.0% | |
| AAGGTTGCGGGACATTCACT+TGG | + | chr1_2:60955859-60955878 | Msa0082150:intron | 50.0% | |
| CTACACCCAACACTGGTATC+AGG | - | chr1_2:60956378-60956397 | None:intergenic | 50.0% | |
| ! | GATACCAGTGTTGGGTGTAG+TGG | + | chr1_2:60956378-60956397 | Msa0082150:CDS | 50.0% |
| ! | TACCAGTGTTGGGTGTAGTG+GGG | + | chr1_2:60956380-60956399 | Msa0082150:CDS | 50.0% |
| TCCCTGACACTGTGTTGTGT+CGG | - | chr1_2:60956503-60956522 | None:intergenic | 50.0% | |
| TTTAGCAAGTCGCTCTGCTG+AGG | + | chr1_2:60956553-60956572 | Msa0082150:CDS | 50.0% | |
| TGTGATATTGGGCCTTACCG+AGG | + | chr1_2:60957123-60957142 | Msa0082150:intron | 50.0% | |
| TGGGCCTTACCGAGGAAATT+TGG | + | chr1_2:60957131-60957150 | Msa0082150:intron | 50.0% | |
| ATTCAATGTGCAGCCTCTGC+TGG | + | chr1_2:60957509-60957528 | Msa0082150:intron | 50.0% | |
| TCCTTGGTACTTTCCAGCAG+AGG | - | chr1_2:60957525-60957544 | None:intergenic | 50.0% | |
| AAGTTGACAACGGGATGCAG+GGG | - | chr1_2:60958123-60958142 | None:intergenic | 50.0% | |
| ! | CAAGTTGACAACGGGATGCA+GGG | - | chr1_2:60958124-60958143 | None:intergenic | 50.0% |
| !! | TCAAGTTGACAACGGGATGC+AGG | - | chr1_2:60958125-60958144 | None:intergenic | 50.0% |
| CATACTTGGGAAGGTTCTGC+TGG | + | chr1_2:60958382-60958401 | Msa0082150:intron | 50.0% | |
| ! | GCAAATCAGGAGGTGTAGCA+CGG | - | chr1_2:60958499-60958518 | None:intergenic | 50.0% |
| ! | GTGCTACACCTCCTGATTTG+CGG | + | chr1_2:60958498-60958517 | Msa0082150:CDS | 50.0% |
| TCAGTCCATTGCCGCAAATC+AGG | - | chr1_2:60958512-60958531 | None:intergenic | 50.0% | |
| ACAGGTTAGGATTGCCATGG+TGG | + | chr1_2:60958651-60958670 | Msa0082150:intron | 50.0% | |
| CAGGTTAGGATTGCCATGGT+GGG | + | chr1_2:60958652-60958671 | Msa0082150:intron | 50.0% | |
| GTGCAACACAAGCATGCAGT+AGG | - | chr1_2:60959145-60959164 | None:intergenic | 50.0% | |
| CTTCAGAGTCTTCCATGCTG+CGG | - | chr1_2:60959350-60959369 | None:intergenic | 50.0% | |
| TGATCCCGCTATGTGCTAGA+CGG | + | chr1_2:60959457-60959476 | Msa0082150:intron | 50.0% | |
| GTCTTGGTTCCAGGAGGATT+TGG | + | chr1_2:60959939-60959958 | Msa0082150:CDS | 50.0% | |
| TTTGGAGATCGTGGTGTGAG+AGG | + | chr1_2:60959957-60959976 | Msa0082150:CDS | 50.0% | |
| CCCAAGCAAATCCCCAAGTA+AGG | - | chr1_2:60960023-60960042 | None:intergenic | 50.0% | |
| ATTAGGGAAACTGGGGAGGA+GGG | - | chr1_2:60960261-60960280 | None:intergenic | 50.0% | |
| GACTAGCAGGCATCACAACA+AGG | - | chr1_2:60960290-60960309 | None:intergenic | 50.0% | |
| !! | ACAGGGTTCTAGGACTCACA+TGG | + | chr1_2:60960314-60960333 | Msa0082150:intron | 50.0% |
| !! | CAGGGTTCTAGGACTCACAT+GGG | + | chr1_2:60960315-60960334 | Msa0082150:intron | 50.0% |
| ATGTCTGGTCGTTGACCATC+AGG | + | chr1_2:60960617-60960636 | Msa0082150:intron | 50.0% | |
| TGTCTGGTCGTTGACCATCA+GGG | + | chr1_2:60960618-60960637 | Msa0082150:intron | 50.0% | |
| !!! | CGACACTCGTTTTGAAACGG+AGG | - | chr1_2:60960698-60960717 | None:intergenic | 50.0% |
| GGGTTTCAAGGGAAGGGAAA+TGG | + | chr1_2:60961020-60961039 | Msa0082150:intron | 50.0% | |
| CAAGGGAAGGGAAATGGGAA+AGG | + | chr1_2:60961026-60961045 | Msa0082150:intron | 50.0% | |
| GGGATGTAGGTTTGGACAGT+CGG | - | chr1_2:60961070-60961089 | None:intergenic | 50.0% | |
| ! | TTTTGCTAGGAAGGGAAGGG+GGG | - | chr1_2:60961091-60961110 | None:intergenic | 50.0% |
| ! | CTTTTGCTAGGAAGGGAAGG+GGG | - | chr1_2:60961092-60961111 | None:intergenic | 50.0% |
| ! | CCTTTTGCTAGGAAGGGAAG+GGG | - | chr1_2:60961093-60961112 | None:intergenic | 50.0% |
| ! | CACCTTTTGCTAGGAAGGGA+AGG | - | chr1_2:60961095-60961114 | None:intergenic | 50.0% |
| ACGGCATCGTCATAGATACG+AGG | + | chr1_2:60961669-60961688 | Msa0082150:CDS | 50.0% | |
| GGATGAAAGCGGAAGACGAA+TGG | + | chr1_2:60961836-60961855 | Msa0082150:CDS | 50.0% | |
| TGAAAGCGGAAGACGAATGG+AGG | + | chr1_2:60961839-60961858 | Msa0082150:CDS | 50.0% | |
| CCAGGCCGAGATTTGAATTC+GGG | - | chr1_2:60962109-60962128 | None:intergenic | 50.0% | |
| CCCAGGCCGAGATTTGAATT+CGG | - | chr1_2:60962110-60962129 | None:intergenic | 50.0% | |
| CCGAATTCAAATCTCGGCCT+GGG | + | chr1_2:60962107-60962126 | Msa0082150:CDS | 50.0% | |
| AACAAAGCAGATGGTCTCCC+AGG | - | chr1_2:60962127-60962146 | None:intergenic | 50.0% | |
| CAGATGGTGTAAACGGCTCT+TGG | - | chr1_2:60962215-60962234 | None:intergenic | 50.0% | |
| AGGTCTCATATTGGCGGCAA+CGG | + | chr1_2:60962498-60962517 | Msa0082150:intron | 50.0% | |
| GAGGAATGGGAATCCTGAAG+TGG | + | chr1_2:60962687-60962706 | Msa0082150:intron | 50.0% | |
| TACCCCATGCTTCTCTAGGT+TGG | + | chr1_2:60962724-60962743 | Msa0082150:intron | 50.0% | |
| GCCTGTGAGTGTCAGGTTAA+TGG | - | chr1_2:60963211-60963230 | None:intergenic | 50.0% | |
| ! | AAAAGGAGCACGCACGTTTG+GGG | - | chr1_2:60963287-60963306 | None:intergenic | 50.0% |
| ! | GAAAAGGAGCACGCACGTTT+GGG | - | chr1_2:60963288-60963307 | None:intergenic | 50.0% |
| ! | AGAAAAGGAGCACGCACGTT+TGG | - | chr1_2:60963289-60963308 | None:intergenic | 50.0% |
| ! | TTTTGATGGAGGTGACGCGG+AGG | - | chr1_2:60954174-60954193 | None:intergenic | 55.0% |
| ! | TGTGCTTGAGAAGGAGCGCA+AGG | + | chr1_2:60954669-60954688 | Msa0082150:CDS | 55.0% |
| ! | GTGCTTGAGAAGGAGCGCAA+GGG | + | chr1_2:60954670-60954689 | Msa0082150:CDS | 55.0% |
| TGAGTCGGTTGCTGTGATCC+CGG | + | chr1_2:60954876-60954895 | Msa0082150:CDS | 55.0% | |
| GTTGCTGTGATCCCGGTTGA+TGG | + | chr1_2:60954883-60954902 | Msa0082150:CDS | 55.0% | |
| !! | GATTGAGCTTGGAGGCACTG+TGG | + | chr1_2:60954933-60954952 | Msa0082150:CDS | 55.0% |
| GAAGTTGTCAGGCCCTGAGA+AGG | - | chr1_2:60956338-60956357 | None:intergenic | 55.0% | |
| ! | ACCAGTGTTGGGTGTAGTGG+GGG | + | chr1_2:60956381-60956400 | Msa0082150:CDS | 55.0% |
| AGCCGACACAACACAGTGTC+AGG | + | chr1_2:60956498-60956517 | Msa0082150:CDS | 55.0% | |
| GCCGACACAACACAGTGTCA+GGG | + | chr1_2:60956499-60956518 | Msa0082150:CDS | 55.0% | |
| GCACTCAGCTTCAACCCCTT+TGG | - | chr1_2:60957196-60957215 | None:intergenic | 55.0% | |
| !! | GCCTCTGCTGGAAAGTACCA+AGG | + | chr1_2:60957521-60957540 | Msa0082150:intron | 55.0% |
| GAGGTGTAGCACGGCTGAAA+AGG | - | chr1_2:60958490-60958509 | None:intergenic | 55.0% | |
| ! | CACCTCCTGATTTGCGGCAA+TGG | + | chr1_2:60958504-60958523 | Msa0082150:CDS | 55.0% |
| GTCCATTGCCGCAAATCAGG+AGG | - | chr1_2:60958509-60958528 | None:intergenic | 55.0% | |
| CGCAGCATGGAAGACTCTGA+AGG | + | chr1_2:60959348-60959367 | Msa0082150:CDS | 55.0% | |
| GCAGAGTGCAGCTTGTGTCT+TGG | + | chr1_2:60959923-60959942 | Msa0082150:intron | 55.0% | |
| GCAGCTTGTGTCTTGGTTCC+AGG | + | chr1_2:60959930-60959949 | Msa0082150:CDS | 55.0% | |
| GCTTGTGTCTTGGTTCCAGG+AGG | + | chr1_2:60959933-60959952 | Msa0082150:CDS | 55.0% | |
| CCACGATCTCCAAATCCTCC+TGG | - | chr1_2:60959951-60959970 | None:intergenic | 55.0% | |
| CCAGGAGGATTTGGAGATCG+TGG | + | chr1_2:60959948-60959967 | Msa0082150:CDS | 55.0% | |
| TTAGGGAAACTGGGGAGGAG+GGG | - | chr1_2:60960260-60960279 | None:intergenic | 55.0% | |
| GATTAGGGAAACTGGGGAGG+AGG | - | chr1_2:60960262-60960281 | None:intergenic | 55.0% | |
| TTTGCTAGGAAGGGAAGGGG+GGG | - | chr1_2:60961090-60961109 | None:intergenic | 55.0% | |
| CCCCTTCCCTTCCTAGCAAA+AGG | + | chr1_2:60961090-60961109 | Msa0082150:intron | 55.0% | |
| CCCGAATTCAAATCTCGGCC+TGG | + | chr1_2:60962106-60962125 | Msa0082150:CDS | 55.0% | |
| GGTCTCATATTGGCGGCAAC+GGG | + | chr1_2:60962499-60962518 | Msa0082150:intron | 55.0% | |
| GTCTCATATTGGCGGCAACG+GGG | + | chr1_2:60962500-60962519 | Msa0082150:CDS | 55.0% | |
| ATTGGGAGCAAGGGAATGGG+AGG | + | chr1_2:60962642-60962661 | Msa0082150:intron | 55.0% | |
| GGGAATGGGAGGTAGGAACT+AGG | + | chr1_2:60962653-60962672 | Msa0082150:intron | 55.0% | |
| CTGCACGCATACTCCACTTC+AGG | - | chr1_2:60962703-60962722 | None:intergenic | 55.0% | |
| CAGCTACCCCATGCTTCTCT+AGG | + | chr1_2:60962720-60962739 | Msa0082150:intron | 55.0% | |
| GGGGCATGGTGAACTGAACA+AGG | - | chr1_2:60963268-60963287 | None:intergenic | 55.0% | |
| ATCTCCGGCGGAGTCGTTAG+CGG | + | chr1_2:60954094-60954113 | Msa0082150:CDS | 60.0% | |
| TCCCCCACTACACCCAACAC+TGG | - | chr1_2:60956385-60956404 | None:intergenic | 60.0% | |
| AACGGGATGCAGGGGACAGT+TGG | - | chr1_2:60958115-60958134 | None:intergenic | 60.0% | |
| CATGCTGCGGCATGTGCTTC+TGG | - | chr1_2:60959337-60959356 | None:intergenic | 60.0% | |
| ! | CAGAAGCACATGCCGCAGCA+TGG | + | chr1_2:60959335-60959354 | Msa0082150:CDS | 60.0% |
| GGAAGGGGGGGATGTAGGTT+TGG | - | chr1_2:60961078-60961097 | None:intergenic | 60.0% | |
| ATTGGCGGCAACGGGGAAGT+TGG | + | chr1_2:60962507-60962526 | Msa0082150:CDS | 60.0% | |
| GGAGCAAGGGAATGGGAGGT+AGG | + | chr1_2:60962646-60962665 | Msa0082150:intron | 60.0% | |
| GTCGTTAGCGGCCTCGGCAA+AGG | + | chr1_2:60954106-60954125 | Msa0082150:CDS | 65.0% | |
| GGCGTCGTCCTCAAAGCCTG+CGG | + | chr1_2:60954148-60954167 | Msa0082150:CDS | 65.0% | |
| GGAAGGGAAGGGGGGGATGT+AGG | - | chr1_2:60961083-60961102 | None:intergenic | 65.0% | |
| ! | GAGCACGCACGTTTGGGGCA+TGG | - | chr1_2:60963282-60963301 | None:intergenic | 65.0% |
| GAGGCCGCTAACGACTCCGC+CGG | - | chr1_2:60954101-60954120 | None:intergenic | 70.0% | |
| GGCGGAGTCGTTAGCGGCCT+CGG | + | chr1_2:60954100-60954119 | Msa0082150:CDS | 70.0% | |
| TGGCGGTGACGCCTTTGCCG+AGG | - | chr1_2:60954120-60954139 | None:intergenic | 70.0% | |
| GGCGTCACCGCCAGCAGCAT+CGG | + | chr1_2:60954127-60954146 | Msa0082150:CDS | 70.0% | |
| GACGACGCCGATGCTGCTGG+CGG | - | chr1_2:60954137-60954156 | None:intergenic | 70.0% | |
| GAGGACGACGCCGATGCTGC+TGG | - | chr1_2:60954140-60954159 | None:intergenic | 70.0% | |
| CGCGGAGGCCGCAGGCTTTG+AGG | - | chr1_2:60954159-60954178 | None:intergenic | 75.0% | |
| ! | GGAGGTGACGCGGAGGCCGC+AGG | - | chr1_2:60954167-60954186 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 60953928 | 60963499 | 60953928 | ID=Msa0082150;Name=Msa0082150 |
| chr1_2 | mRNA | 60953928 | 60963499 | 60953928 | ID=Msa0082150-mRNA-1;Parent=Msa0082150;Name=Msa0082150-mRNA-1;_AED=0.17;_eAED=0.17;_QI=151|1|1|1|0.95|0.91|23|447|562 |
| chr1_2 | exon | 60953928 | 60954196 | 60953928 | ID=Msa0082150-mRNA-1:exon:19943;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60954282 | 60954361 | 60954282 | ID=Msa0082150-mRNA-1:exon:19944;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60954485 | 60954571 | 60954485 | ID=Msa0082150-mRNA-1:exon:19945;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60954667 | 60954717 | 60954667 | ID=Msa0082150-mRNA-1:exon:19946;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60954838 | 60954955 | 60954838 | ID=Msa0082150-mRNA-1:exon:19947;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60955060 | 60955116 | 60955060 | ID=Msa0082150-mRNA-1:exon:19948;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60956344 | 60956408 | 60956344 | ID=Msa0082150-mRNA-1:exon:19949;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60956491 | 60956574 | 60956491 | ID=Msa0082150-mRNA-1:exon:19950;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60957522 | 60957572 | 60957522 | ID=Msa0082150-mRNA-1:exon:19951;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60957664 | 60957726 | 60957664 | ID=Msa0082150-mRNA-1:exon:19952;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60957820 | 60957866 | 60957820 | ID=Msa0082150-mRNA-1:exon:19953;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60958496 | 60958565 | 60958496 | ID=Msa0082150-mRNA-1:exon:19954;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60958655 | 60958717 | 60958655 | ID=Msa0082150-mRNA-1:exon:19955;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60959140 | 60959229 | 60959140 | ID=Msa0082150-mRNA-1:exon:19956;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60959331 | 60959369 | 60959331 | ID=Msa0082150-mRNA-1:exon:19957;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60959927 | 60960076 | 60959927 | ID=Msa0082150-mRNA-1:exon:19958;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60960163 | 60960240 | 60960163 | ID=Msa0082150-mRNA-1:exon:19959;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60960318 | 60960403 | 60960318 | ID=Msa0082150-mRNA-1:exon:19960;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60961642 | 60961690 | 60961642 | ID=Msa0082150-mRNA-1:exon:19961;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60961780 | 60961860 | 60961780 | ID=Msa0082150-mRNA-1:exon:19962;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60962058 | 60962151 | 60962058 | ID=Msa0082150-mRNA-1:exon:19963;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60962500 | 60962614 | 60962500 | ID=Msa0082150-mRNA-1:exon:19964;Parent=Msa0082150-mRNA-1 |
| chr1_2 | exon | 60963100 | 60963499 | 60963100 | ID=Msa0082150-mRNA-1:exon:19965;Parent=Msa0082150-mRNA-1 |
| chr1_2 | five_prime_UTR | 60953928 | 60954078 | 60953928 | ID=Msa0082150-mRNA-1:five_prime_utr;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60954079 | 60954196 | 60954079 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60954282 | 60954361 | 60954282 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60954485 | 60954571 | 60954485 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60954667 | 60954717 | 60954667 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60954838 | 60954955 | 60954838 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60955060 | 60955116 | 60955060 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60956344 | 60956408 | 60956344 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60956491 | 60956574 | 60956491 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60957522 | 60957572 | 60957522 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60957664 | 60957726 | 60957664 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60957820 | 60957866 | 60957820 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60958496 | 60958565 | 60958496 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60958655 | 60958717 | 60958655 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60959140 | 60959229 | 60959140 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60959331 | 60959369 | 60959331 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60959927 | 60960076 | 60959927 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60960163 | 60960240 | 60960163 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60960318 | 60960403 | 60960318 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60961642 | 60961690 | 60961642 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60961780 | 60961860 | 60961780 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60962058 | 60962151 | 60962058 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | CDS | 60962500 | 60962567 | 60962500 | ID=Msa0082150-mRNA-1:cds;Parent=Msa0082150-mRNA-1 |
| chr1_2 | three_prime_UTR | 60962568 | 60962614 | 60962568 | ID=Msa0082150-mRNA-1:three_prime_utr;Parent=Msa0082150-mRNA-1 |
| chr1_2 | three_prime_UTR | 60963100 | 60963499 | 60963100 | ID=Msa0082150-mRNA-1:three_prime_utr;Parent=Msa0082150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
