Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0174530 | XP_024639356.1 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0174530 | sp|Q54V77|PYRG_DICDI | 60.808 | 569 | 203 | 6 | 1 | 551 | 1 | 567 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0174530 | G7IDT8 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030620 | Msa0174530 | 0.935666 | 5.923438e-97 | -8.615850e-47 |
| Msa0082150 | Msa0174530 | 0.857592 | 1.469641e-62 | -8.615850e-47 |
| Msa0128510 | Msa0174530 | 0.985492 | 9.785038e-164 | -8.615850e-47 |
| Msa0138720 | Msa0174530 | 0.932366 | 9.488584e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0174530 | MtrunA17_Chr1g0195001 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Msa0174530 | MtrunA17_Chr8g0356221 | 71.404 | 570 | 155 | 2 | 1 | 562 | 1 | 570 | 0.0 | 855 |
| Msa0174530 | MtrunA17_Chr2g0309341 | 72.894 | 546 | 148 | 0 | 1 | 546 | 1 | 546 | 0.0 | 841 |
| Msa0174530 | MtrunA17_Chr8g0369081 | 71.196 | 552 | 159 | 0 | 1 | 552 | 1 | 552 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0174530 | AT4G02120.1 | 83.813 | 556 | 90 | 0 | 1 | 556 | 1 | 556 | 0.0 | 981 |
| Msa0174530 | AT4G02120.2 | 80.623 | 578 | 90 | 1 | 1 | 556 | 1 | 578 | 0.0 | 971 |
| Msa0174530 | AT4G02120.5 | 79.137 | 556 | 77 | 1 | 1 | 556 | 1 | 517 | 0.0 | 905 |
| Msa0174530 | AT4G02120.3 | 86.570 | 484 | 65 | 0 | 1 | 484 | 1 | 484 | 0.0 | 875 |
| Msa0174530 | AT3G12670.1 | 73.732 | 552 | 144 | 1 | 1 | 552 | 1 | 551 | 0.0 | 846 |
| Msa0174530 | AT4G02120.4 | 86.910 | 466 | 61 | 0 | 1 | 466 | 1 | 466 | 0.0 | 843 |
| Msa0174530 | AT1G30820.1 | 70.780 | 551 | 161 | 0 | 1 | 551 | 1 | 551 | 0.0 | 833 |
| Msa0174530 | AT4G20320.2 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0174530 | AT4G20320.5 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0174530 | AT4G20320.6 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0174530 | AT4G20320.4 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0174530 | AT4G20320.1 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0174530 | AT2G34890.1 | 65.480 | 562 | 192 | 1 | 1 | 560 | 1 | 562 | 0.0 | 785 |
| Msa0174530 | AT4G20320.3 | 68.526 | 502 | 158 | 0 | 50 | 551 | 1 | 502 | 0.0 | 738 |
Find 176 sgRNAs with CRISPR-Local
Find 602 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATAATATTATAATTA+TGG | 0.126755 | 1_4:-60203856 | Msa0174530:three_prime_UTR |
| GAGCGGGAAGGTTGATATTT+TGG | 0.186108 | 1_4:+60213321 | None:intergenic |
| TTCATGATGTACCAAATATT+TGG | 0.205073 | 1_4:-60209632 | Msa0174530:CDS |
| ATTGTTCTCTCTGGCATATT+TGG | 0.242741 | 1_4:+60207322 | None:intergenic |
| TTTATAGGTTGATTTGGATT+TGG | 0.257444 | 1_4:-60212839 | Msa0174530:intron |
| TTATAGGTTGATTTGGATTT+GGG | 0.261073 | 1_4:-60212838 | Msa0174530:intron |
| GCAGCTTGTGTCTTGGTTCC+AGG | 0.262807 | 1_4:-60207386 | Msa0174530:CDS |
| CATGCTGCGGCATGTGCTTC+TGG | 0.277150 | 1_4:+60207982 | None:intergenic |
| GTCTTGGTTCCAGGAGGATT+TGG | 0.288037 | 1_4:-60207377 | Msa0174530:CDS |
| AGGGGAATATGCCAAATATT+TGG | 0.292011 | 1_4:+60209621 | None:intergenic |
| ATGAAAATTACAACAGGATT+TGG | 0.292322 | 1_4:+60207108 | None:intergenic |
| TTACAACAGGATTTGGTGTT+TGG | 0.292770 | 1_4:+60207115 | None:intergenic |
| AATTGCACGCCTACATAATA+TGG | 0.299023 | 1_4:+60205243 | None:intergenic |
| GAAAAGGAGCACGCACGTTT+GGG | 0.306880 | 1_4:+60204037 | None:intergenic |
| GAAGATAATATTATAATTAT+GGG | 0.320733 | 1_4:-60203855 | Msa0174530:three_prime_UTR |
| CTAGTCATAAACAGGGTTCT+AGG | 0.329918 | 1_4:-60207015 | Msa0174530:intron |
| AGAGACTCACTCTAAGTAAC+AGG | 0.332129 | 1_4:+60209601 | None:intergenic |
| GCCTGTGAGTGTCAGGTTAA+TGG | 0.343980 | 1_4:+60204114 | None:intergenic |
| AGAAAAGGAGCACGCACGTT+TGG | 0.345282 | 1_4:+60204036 | None:intergenic |
| GGGTCTTCATTTCCATCAAC+CGG | 0.349986 | 1_4:+60212422 | None:intergenic |
| GGCGGAGTCGTTAGCGGCCT+CGG | 0.350600 | 1_4:-60213219 | Msa0174530:CDS |
| AGCCGACACAACACAGTGTC+AGG | 0.360915 | 1_4:-60210817 | Msa0174530:CDS |
| CCTTACTTGGGGATTTGCTT+GGG | 0.363800 | 1_4:-60207296 | Msa0174530:CDS |
| CCAGGCCGAGATTTGAATTC+GGG | 0.365733 | 1_4:+60205216 | None:intergenic |
| TACAACAGGATTTGGTGTTT+GGG | 0.372108 | 1_4:+60207116 | None:intergenic |
| TCCTTACTTGGGGATTTGCT+TGG | 0.377880 | 1_4:-60207297 | Msa0174530:CDS |
| CCCAGGCCGAGATTTGAATT+CGG | 0.381611 | 1_4:+60205215 | None:intergenic |
| CTACACCCAACACTGGTATC+AGG | 0.389842 | 1_4:+60210940 | None:intergenic |
| TACTACTGGGAAAATATATC+AGG | 0.394580 | 1_4:-60212767 | Msa0174530:intron |
| ATTGAAACTTTAGAAGAAGC+TGG | 0.397254 | 1_4:-60205527 | Msa0174530:CDS |
| GTTTCATTTCATTTCATCTT+GGG | 0.397870 | 1_4:-60213366 | Msa0174530:five_prime_UTR |
| CGCGGAGGCCGCAGGCTTTG+AGG | 0.401516 | 1_4:+60213163 | None:intergenic |
| AGTTTCATTTCATTTCATCT+TGG | 0.404712 | 1_4:-60213367 | Msa0174530:five_prime_UTR |
| GATCTACGATTCTTTACTAT+AGG | 0.408278 | 1_4:-60204756 | Msa0174530:three_prime_UTR |
| ATTCAATGTGCAGCCTCTGC+TGG | 0.411306 | 1_4:-60209806 | Msa0174530:intron |
| AGAGAACAATGTTCCTTACT+TGG | 0.411823 | 1_4:-60207309 | Msa0174530:CDS |
| TCACCGATGCAATCAGAAAC+TGG | 0.416127 | 1_4:-60212466 | Msa0174530:CDS |
| TCAGTCCATTGCCGCAAATC+AGG | 0.416330 | 1_4:+60208806 | None:intergenic |
| TTTGCGGCAATGGACTGATA+TGG | 0.421515 | 1_4:-60208801 | Msa0174530:CDS |
| TTTATAAGCCTGTGAGTGTC+AGG | 0.421744 | 1_4:+60204107 | None:intergenic |
| GGTCTCATATTGGCAGCAAC+GGG | 0.423607 | 1_4:-60204823 | Msa0174530:CDS |
| AAGGATAATAATATTACTAC+TGG | 0.423934 | 1_4:-60212781 | Msa0174530:CDS |
| GCTGCAATCCAGTCAATTGA+TGG | 0.432899 | 1_4:+60208140 | None:intergenic |
| CGCGTCACCTCCATCAAAAT+CGG | 0.434250 | 1_4:-60213144 | Msa0174530:intron |
| TTCATATTTATCTGTTGTAA+AGG | 0.435122 | 1_4:-60208619 | Msa0174530:intron |
| CACCTCCTGATTTGCGGCAA+TGG | 0.440971 | 1_4:-60208811 | Msa0174530:CDS |
| CTGGGCTAAAATTTGTTGGC+AGG | 0.443903 | 1_4:-60205508 | Msa0174530:CDS |
| TGCCGTAGAGCCTCAATAAA+CGG | 0.445911 | 1_4:+60212240 | None:intergenic |
| TGACATTGTTCAGGTAAATC+CGG | 0.446706 | 1_4:-60205555 | Msa0174530:intron |
| GTTGCTGTGATCCCGGTTGA+TGG | 0.447710 | 1_4:-60212434 | Msa0174530:CDS |
| GATGTTTGTGTGATTGAGCT+TGG | 0.449727 | 1_4:-60212395 | Msa0174530:CDS |
| GAGGACGACGCCGATGCTGC+TGG | 0.450311 | 1_4:+60213182 | None:intergenic |
| GAGAACAATGTTCCTTACTT+GGG | 0.452256 | 1_4:-60207308 | Msa0174530:CDS |
| ATTGGCAGCAACGGGGAAGT+TGG | 0.452434 | 1_4:-60204815 | Msa0174530:CDS |
| ATTGTGCACTGTCATCTTCA+AGG | 0.452441 | 1_4:+60208111 | None:intergenic |
| AATTACCAGGTATGGCAATT+CGG | 0.452917 | 1_4:-60205689 | Msa0174530:intron |
| ATGAAGTACGTTCTCATCTC+CGG | 0.453080 | 1_4:-60213240 | Msa0174530:CDS |
| GCAGAGTGCAGCTTGTGTCT+TGG | 0.454760 | 1_4:-60207393 | Msa0174530:intron |
| GATACCAGTGTTGGGTGTAG+TGG | 0.458939 | 1_4:-60210937 | Msa0174530:CDS |
| TCTAAAGTTTCAATAACATC+CGG | 0.459751 | 1_4:+60205536 | None:intergenic |
| GTCGTTAGCGGCCTCGGCAA+AGG | 0.462544 | 1_4:-60213213 | Msa0174530:CDS |
| AAAACTTCTCCATGTTCAAA+AGG | 0.464491 | 1_4:+60213000 | None:intergenic |
| GTCAGGGAACTAAGAGCATT+GGG | 0.465525 | 1_4:-60210800 | Msa0174530:CDS |
| CCCGAATTCAAATCTCGGCC+TGG | 0.467639 | 1_4:-60205216 | Msa0174530:CDS |
| GGAATGAATGAATGAGTTGT+AGG | 0.469905 | 1_4:+60213276 | None:intergenic |
| ATCACTAGCATTCATGAGAA+TGG | 0.472024 | 1_4:-60204784 | Msa0174530:CDS |
| GAAGCTGGGCTAAAATTTGT+TGG | 0.472530 | 1_4:-60205512 | Msa0174530:CDS |
| CATTGAGACCATCAATTGAC+TGG | 0.472847 | 1_4:-60208148 | Msa0174530:CDS |
| ATACCAGTGTTGGGTGTAGT+GGG | 0.477063 | 1_4:-60210936 | Msa0174530:CDS |
| GTAAGGAACATTGTTCTCTC+TGG | 0.480928 | 1_4:+60207313 | None:intergenic |
| GGAGGTGACGCGGAGGCCGC+AGG | 0.484019 | 1_4:+60213155 | None:intergenic |
| AACAAAGCAGATGGTCTCCC+AGG | 0.484640 | 1_4:+60205198 | None:intergenic |
| GGCGTCACCGCCAGCAGCAT+CGG | 0.487935 | 1_4:-60213192 | Msa0174530:CDS |
| TCAATCACACAAACATCAGC+AGG | 0.489125 | 1_4:+60212401 | None:intergenic |
| TACTTAGTCACTCATTATGA+AGG | 0.490591 | 1_4:-60203914 | Msa0174530:three_prime_UTR |
| CTATACTGTAGGTCTCATAT+TGG | 0.496171 | 1_4:-60204833 | Msa0174530:intron |
| CCTACATAATATGGATGACT+TGG | 0.496534 | 1_4:+60205252 | None:intergenic |
| CCCAAGCAAATCCCCAAGTA+AGG | 0.496781 | 1_4:+60207296 | None:intergenic |
| TACAGCAGCTTAACTTACTT+AGG | 0.505369 | 1_4:-60209470 | Msa0174530:intron |
| CCGAATTCAAATCTCGGCCT+GGG | 0.505440 | 1_4:-60205215 | Msa0174530:CDS |
| TTGAAACTTTAGAAGAAGCT+GGG | 0.507446 | 1_4:-60205526 | Msa0174530:CDS |
| TGGATGAGACAGAAGTTGTC+AGG | 0.508265 | 1_4:+60210969 | None:intergenic |
| TCCTTGGTACTTTCCAGCAG+AGG | 0.508640 | 1_4:+60209793 | None:intergenic |
| TCTGGCATGAAAATTACAAC+AGG | 0.511552 | 1_4:+60207102 | None:intergenic |
| TGTCAGGGAACTAAGAGCAT+TGG | 0.513673 | 1_4:-60210801 | Msa0174530:CDS |
| TGCCGTTTATTGAGGCTCTA+CGG | 0.516145 | 1_4:-60212242 | Msa0174530:CDS |
| TTCTTAGTCTGTGCTTGAGA+AGG | 0.517567 | 1_4:-60212657 | Msa0174530:intron |
| TTCATCCCGAATTCAAATCT+CGG | 0.519745 | 1_4:-60205221 | Msa0174530:CDS |
| ACCATTAACCTGACACTCAC+AGG | 0.520204 | 1_4:-60204115 | Msa0174530:three_prime_UTR |
| GTATGGCAATTCGGAGTATG+TGG | 0.526581 | 1_4:-60205680 | Msa0174530:CDS |
| CCAGCGTCAATGTTCAAATA+CGG | 0.527929 | 1_4:+60213033 | None:intergenic |
| TGTTAGCCTGATACCAGTGT+TGG | 0.528405 | 1_4:-60210946 | Msa0174530:CDS |
| ACCAGTGTTGGGTGTAGTGG+GGG | 0.530013 | 1_4:-60210934 | Msa0174530:CDS |
| CCAAGTCATCCATATTATGT+AGG | 0.530338 | 1_4:-60205252 | Msa0174530:CDS |
| GGATGAAAGCGGAAGACGAA+TGG | 0.530600 | 1_4:-60205486 | Msa0174530:CDS |
| GTGCAACACAAGCATGCAGT+AGG | 0.531316 | 1_4:+60208174 | None:intergenic |
| TGAGTCTATGCCGTTTATTG+AGG | 0.534928 | 1_4:-60212250 | Msa0174530:CDS |
| CCACGATCTCCAAATCCTCC+TGG | 0.535514 | 1_4:+60207368 | None:intergenic |
| GAGCACGCACGTTTGGGGCA+TGG | 0.537304 | 1_4:+60204043 | None:intergenic |
| TGAGTCGGTTGCTGTGATCC+CGG | 0.538290 | 1_4:-60212441 | Msa0174530:CDS |
| ATCTCCGGCGGAGTCGTTAG+CGG | 0.542697 | 1_4:-60213225 | Msa0174530:CDS |
| GTTTGTGTGATTGAGCTTGG+AGG | 0.545170 | 1_4:-60212392 | Msa0174530:CDS |
| GTGCTACACCTCCTGATTTG+CGG | 0.545667 | 1_4:-60208817 | Msa0174530:CDS |
| TCCCTGACACTGTGTTGTGT+CGG | 0.548570 | 1_4:+60210815 | None:intergenic |
| TTTGGAGATCGTGGTGTGAG+AGG | 0.552633 | 1_4:-60207359 | Msa0174530:CDS |
| GTTAGCCTGATACCAGTGTT+GGG | 0.554596 | 1_4:-60210945 | Msa0174530:CDS |
| TCTTGATGTTACACTTACAA+AGG | 0.556810 | 1_4:-60212800 | Msa0174530:CDS |
| AGAACAATGTTCCTTACTTG+GGG | 0.557436 | 1_4:-60207307 | Msa0174530:CDS |
| TGGGCTAAAATTTGTTGGCA+GGG | 0.558448 | 1_4:-60205507 | Msa0174530:CDS |
| TGCTGTCATACCCACTTGAA+AGG | 0.561108 | 1_4:+60212212 | None:intergenic |
| AGGTCTCATATTGGCAGCAA+CGG | 0.563048 | 1_4:-60204824 | Msa0174530:CDS |
| TACCAGTGTTGGGTGTAGTG+GGG | 0.563851 | 1_4:-60210935 | Msa0174530:CDS |
| ACACTGGTATCAGGCTAACA+TGG | 0.566475 | 1_4:+60210949 | None:intergenic |
| TGTGCTTGAGAAGGAGCGCA+AGG | 0.569431 | 1_4:-60212648 | Msa0174530:CDS |
| CCAGGAGGATTTGGAGATCG+TGG | 0.581850 | 1_4:-60207368 | Msa0174530:CDS |
| AATCCAGTTTCTGATTGCAT+CGG | 0.583198 | 1_4:+60212463 | None:intergenic |
| GAGCGCAAGGGAGATTATCT+CGG | 0.583903 | 1_4:-60212635 | Msa0174530:CDS |
| GTTTGTGTTTATATCCGAGC+GGG | 0.589396 | 1_4:+60213305 | None:intergenic |
| CAGGTTAGGATTGCCATGGT+GGG | 0.589890 | 1_4:-60208663 | Msa0174530:CDS |
| TTATAATTATGGGTTATGAG+TGG | 0.590260 | 1_4:-60203845 | Msa0174530:three_prime_UTR |
| ATGGGAAGTACCATGAGACT+TGG | 0.591140 | 1_4:-60206986 | Msa0174530:CDS |
| TCCATGTTCAAAAGGAGACA+TGG | 0.591963 | 1_4:+60213008 | None:intergenic |
| GCAAATCAGGAGGTGTAGCA+CGG | 0.592136 | 1_4:+60208819 | None:intergenic |
| TTTACAGGTTAGGATTGCCA+TGG | 0.595375 | 1_4:-60208667 | Msa0174530:intron |
| TGCAACACAAGCATGCAGTA+GGG | 0.596048 | 1_4:+60208175 | None:intergenic |
| AAAATATCAACCTTCCCGCT+CGG | 0.598030 | 1_4:-60213319 | Msa0174530:five_prime_UTR |
| ATTGAGCTTGGAGGCACTGT+GGG | 0.598258 | 1_4:-60212383 | Msa0174530:intron |
| TGATTGTTTGATGTGTATAG+AGG | 0.598464 | 1_4:-60204204 | Msa0174530:three_prime_UTR |
| TGGCGGTGACGCCTTTGCCG+AGG | 0.599015 | 1_4:+60213202 | None:intergenic |
| ACAGGTTAGGATTGCCATGG+TGG | 0.599284 | 1_4:-60208664 | Msa0174530:intron |
| ACGGCAATTATCCTTTCAAG+TGG | 0.601495 | 1_4:-60212223 | Msa0174530:CDS |
| CAGAAGCACATGCCGCAGCA+TGG | 0.601979 | 1_4:-60207981 | Msa0174530:CDS |
| GAGGCCGCTAACGACTCCGC+CGG | 0.602079 | 1_4:+60213221 | None:intergenic |
| GGGGCATGGTGAACTGAACA+AGG | 0.602093 | 1_4:+60204057 | None:intergenic |
| TTTAGCAAGTCGCTCTGCTG+AGG | 0.603158 | 1_4:-60210762 | Msa0174530:intron |
| GTGTTTATATCCGAGCGGGA+AGG | 0.606105 | 1_4:+60213309 | None:intergenic |
| ACTGAAAACTTACTGGAACA+TGG | 0.606549 | 1_4:+60209752 | None:intergenic |
| CTTCAGAGTCTTCCATGCTG+CGG | 0.607051 | 1_4:+60207969 | None:intergenic |
| CTGCTGTAAAATTGAGTGGT+GGG | 0.610647 | 1_4:+60209485 | None:intergenic |
| CTGATTGCATCGGTGATATG+CGG | 0.611112 | 1_4:+60212473 | None:intergenic |
| ATTCGGAGTATGTGGATGAA+CGG | 0.613690 | 1_4:-60205672 | Msa0174530:CDS |
| GAGCGACTTGCTAAAAGATG+AGG | 0.613956 | 1_4:+60210770 | None:intergenic |
| GCTTGTGTCTTGGTTCCAGG+AGG | 0.614810 | 1_4:-60207383 | Msa0174530:CDS |
| GGTCTTCATTTCCATCAACC+GGG | 0.617073 | 1_4:+60212423 | None:intergenic |
| AAAAGGAGCACGCACGTTTG+GGG | 0.618322 | 1_4:+60204038 | None:intergenic |
| TCTTCGAGATCCAAGTCTCA+TGG | 0.624956 | 1_4:+60206976 | None:intergenic |
| TGAAAGCGGAAGACGAATGG+AGG | 0.626991 | 1_4:-60205483 | Msa0174530:intron |
| GCCATGGTGGGAAAATATGT+TGG | 0.628848 | 1_4:-60208651 | Msa0174530:CDS |
| GTCCATTGCCGCAAATCAGG+AGG | 0.628942 | 1_4:+60208809 | None:intergenic |
| CGGCAATTATCCTTTCAAGT+GGG | 0.631841 | 1_4:-60212222 | Msa0174530:intron |
| GCCGACACAACACAGTGTCA+GGG | 0.640779 | 1_4:-60210816 | Msa0174530:CDS |
| GCCTCTGCTGGAAAGTACCA+AGG | 0.645176 | 1_4:-60209794 | Msa0174530:CDS |
| ACAGGGTTCTAGGACTCACA+TGG | 0.646100 | 1_4:-60207005 | Msa0174530:intron |
| GAGACTCACTCTAAGTAACA+GGG | 0.646615 | 1_4:+60209602 | None:intergenic |
| TGTTCTTGATGATGGCGGAG+AGG | 0.649503 | 1_4:-60212977 | Msa0174530:intron |
| GATTGAGCTTGGAGGCACTG+TGG | 0.652060 | 1_4:-60212384 | Msa0174530:CDS |
| CGCAGCATGGAAGACTCTGA+AGG | 0.652129 | 1_4:-60207968 | Msa0174530:intron |
| GTGCTTGAGAAGGAGCGCAA+GGG | 0.658499 | 1_4:-60212647 | Msa0174530:CDS |
| CCGTATTTGAACATTGACGC+TGG | 0.659655 | 1_4:-60213033 | Msa0174530:CDS |
| AATCAGAAACTGGATTGAGT+CGG | 0.661872 | 1_4:-60212456 | Msa0174530:CDS |
| GCTGCTGTAAAATTGAGTGG+TGG | 0.662926 | 1_4:+60209484 | None:intergenic |
| TTTGTTGGCAGGGATGAAAG+CGG | 0.667172 | 1_4:-60205497 | Msa0174530:CDS |
| AGGATAATAATATTACTACT+GGG | 0.667804 | 1_4:-60212780 | Msa0174530:CDS |
| AAGTACGTTCTCATCTCCGG+CGG | 0.672070 | 1_4:-60213237 | Msa0174530:CDS |
| TAAGCTGCTGTAAAATTGAG+TGG | 0.672139 | 1_4:+60209481 | None:intergenic |
| ATGTGTATAGAGGTCTGAAG+CGG | 0.677343 | 1_4:-60204194 | Msa0174530:three_prime_UTR |
| GACGACGCCGATGCTGCTGG+CGG | 0.688026 | 1_4:+60213185 | None:intergenic |
| GGCGTCGTCCTCAAAGCCTG+CGG | 0.692971 | 1_4:-60213171 | Msa0174530:CDS |
| CAATCACACAAACATCAGCA+GGG | 0.701082 | 1_4:+60212402 | None:intergenic |
| AGACTCACTCTAAGTAACAG+GGG | 0.704240 | 1_4:+60209603 | None:intergenic |
| CAGGGTTCTAGGACTCACAT+GGG | 0.704702 | 1_4:-60207004 | Msa0174530:CDS |
| AAATTAACTTGCTTATAGTG+TGG | 0.711685 | 1_4:+60204152 | None:intergenic |
| GTCTCATATTGGCAGCAACG+GGG | 0.722190 | 1_4:-60204822 | Msa0174530:CDS |
| TAGTACTAACAGATTCAGTG+AGG | 0.746597 | 1_4:+60208762 | None:intergenic |
| ACGGCATCGTCATAGATACG+AGG | 0.761487 | 1_4:-60205653 | Msa0174530:intron |
| TGTTTGTGTTTATATCCGAG+CGG | 0.765064 | 1_4:+60213304 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTGAGAAA+CGG | + | chr1_4:60204174-60204193 | None:intergenic | 10.0% |
| !!! | AGTTCAATTTTAATTTATTA+TGG | - | chr1_4:60204322-60204341 | Msa0174530:intron | 10.0% |
| !! | TAATAAATTAAAGATTATCT+GGG | + | chr1_4:60207530-60207549 | None:intergenic | 10.0% |
| !! | TCTAAAAAAATTAAAAAAAG+GGG | - | chr1_4:60208968-60208987 | Msa0174530:intron | 10.0% |
| !! | TGAAGATAATATTATAATTA+TGG | - | chr1_4:60213381-60213400 | Msa0174530:five_prime_UTR | 10.0% |
| !! | GAAGATAATATTATAATTAT+GGG | - | chr1_4:60213382-60213401 | Msa0174530:five_prime_UTR | 10.0% |
| !!! | ATTTTAATTTATTATGGTTC+TGG | - | chr1_4:60204328-60204347 | Msa0174530:intron | 15.0% |
| !!! | AATTTTATTTAAGATCAATC+TGG | - | chr1_4:60205371-60205390 | Msa0174530:intron | 15.0% |
| !!! | TGATGTTTTATTTGATATTA+TGG | - | chr1_4:60205980-60205999 | Msa0174530:intron | 15.0% |
| !!! | AAAAATACGTATGTTTTTAT+AGG | - | chr1_4:60206015-60206034 | Msa0174530:intron | 15.0% |
| !!! | AAAATACGTATGTTTTTATA+GGG | - | chr1_4:60206016-60206035 | Msa0174530:intron | 15.0% |
| !!! | TATAATCATTATTTTGCATT+TGG | - | chr1_4:60206715-60206734 | Msa0174530:intron | 15.0% |
| !! | AATAAAGATTAAAAGTTTGT+CGG | + | chr1_4:60206855-60206874 | None:intergenic | 15.0% |
| !! | CTAATAAATTAAAGATTATC+TGG | + | chr1_4:60207531-60207550 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTTCATCAATTA+AGG | + | chr1_4:60207938-60207957 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTCGTTTAAATC+TGG | - | chr1_4:60208773-60208792 | Msa0174530:CDS | 15.0% |
| !! | AAATTGCATTTAAAGAAATT+TGG | - | chr1_4:60209166-60209185 | Msa0174530:intron | 15.0% |
| !!! | GCTTATTTAATTTTATTTTG+TGG | - | chr1_4:60209215-60209234 | Msa0174530:intron | 15.0% |
| !!! | GTAATTTAAAATCTATTCTT+AGG | - | chr1_4:60210059-60210078 | Msa0174530:intron | 15.0% |
| !!! | ATTTTATGTAAATGAATATC+AGG | - | chr1_4:60210561-60210580 | Msa0174530:intron | 15.0% |
| !! | AATAGTAGAATATATTACTT+TGG | - | chr1_4:60210734-60210753 | Msa0174530:intron | 15.0% |
| !!! | TCATTAAGAAACATTTTAAA+CGG | - | chr1_4:60213347-60213366 | Msa0174530:five_prime_UTR | 15.0% |
| !!! | TTTTGCTTTTTGACTTTTAT+AGG | - | chr1_4:60204383-60204402 | Msa0174530:intron | 20.0% |
| !! | AAGGATAATAATATTACTAC+TGG | - | chr1_4:60204456-60204475 | Msa0174530:intron | 20.0% |
| !! | AGGATAATAATATTACTACT+GGG | - | chr1_4:60204457-60204476 | Msa0174530:intron | 20.0% |
| !!! | TTTATGTTGATTTTGCTTTA+TGG | - | chr1_4:60204544-60204563 | Msa0174530:intron | 20.0% |
| !!! | TGATATTTTTGTTGATCTAT+AGG | - | chr1_4:60204958-60204977 | Msa0174530:intron | 20.0% |
| !!! | GATATTTTTGTTGATCTATA+GGG | - | chr1_4:60204959-60204978 | Msa0174530:intron | 20.0% |
| !!! | ATATTTTTGTTGATCTATAG+GGG | - | chr1_4:60204960-60204979 | Msa0174530:intron | 20.0% |
| !! | TCTTTACCTTTAGTATTATA+TGG | + | chr1_4:60205199-60205218 | None:intergenic | 20.0% |
| !! | TACATATAATCCAAATACTT+AGG | - | chr1_4:60205310-60205329 | Msa0174530:intron | 20.0% |
| !!! | ATAATTCTATGTACCATTTT+TGG | - | chr1_4:60205400-60205419 | Msa0174530:intron | 20.0% |
| !! | TGCTTAAATTTCAAATGTAT+TGG | - | chr1_4:60205508-60205527 | Msa0174530:CDS | 20.0% |
| !! | TCTTAAAAGATGTACATTTA+TGG | - | chr1_4:60205858-60205877 | Msa0174530:intron | 20.0% |
| !! | TTTATTTGATATTATGGCAT+TGG | - | chr1_4:60205986-60206005 | Msa0174530:intron | 20.0% |
| !!! | AGTTAATTTTAAATGCATCT+AGG | + | chr1_4:60206523-60206542 | None:intergenic | 20.0% |
| !! | TAAAATTAACTGTGTAACTA+TGG | - | chr1_4:60206532-60206551 | Msa0174530:intron | 20.0% |
| !! | AGATAATATATTTCTCTGTT+TGG | - | chr1_4:60206917-60206936 | Msa0174530:intron | 20.0% |
| !! | GTAAATCAATAAATAGATTG+TGG | - | chr1_4:60207083-60207102 | Msa0174530:intron | 20.0% |
| !!! | TTGTCTTTTATTTTCATAAC+TGG | - | chr1_4:60207802-60207821 | Msa0174530:intron | 20.0% |
| !! | AAAAACTATAAGTCATATGT+TGG | - | chr1_4:60208216-60208235 | Msa0174530:intron | 20.0% |
| !! | TTCATATTTATCTGTTGTAA+AGG | - | chr1_4:60208618-60208637 | Msa0174530:intron | 20.0% |
| !! | AATCCAAATATGTTGATATT+CGG | + | chr1_4:60208934-60208953 | None:intergenic | 20.0% |
| !!! | AAATTAAAAAAAGGGGTTTT+TGG | - | chr1_4:60208975-60208994 | Msa0174530:intron | 20.0% |
| !! | ATCATAGATATTAAAGCAAT+GGG | + | chr1_4:60209438-60209457 | None:intergenic | 20.0% |
| !! | ACAAAATTTCAGATTCAATA+TGG | + | chr1_4:60209684-60209703 | None:intergenic | 20.0% |
| !! | TGTAATGACAATATTTGTTT+GGG | - | chr1_4:60209809-60209828 | Msa0174530:intron | 20.0% |
| !!! | TAAAATCTATTCTTAGGTTT+TGG | - | chr1_4:60210065-60210084 | Msa0174530:intron | 20.0% |
| !!! | AAAATCTATTCTTAGGTTTT+GGG | - | chr1_4:60210066-60210085 | Msa0174530:intron | 20.0% |
| !!! | TGTAGTGTTTTAATAATTGA+TGG | - | chr1_4:60210346-60210365 | Msa0174530:intron | 20.0% |
| !! | GAAAAAAAAAGTTATCTGAT+GGG | + | chr1_4:60210428-60210447 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAGTTATCTGA+TGG | + | chr1_4:60210429-60210448 | None:intergenic | 20.0% |
| !!! | GATAACTTTTTTTTTCTTTC+TGG | - | chr1_4:60210432-60210451 | Msa0174530:intron | 20.0% |
| !! | GTAATATATTCTACTATTGT+GGG | + | chr1_4:60210732-60210751 | None:intergenic | 20.0% |
| !! | AGTAATATATTCTACTATTG+TGG | + | chr1_4:60210733-60210752 | None:intergenic | 20.0% |
| !! | TGTATACAACATTAATTAGA+GGG | - | chr1_4:60210760-60210779 | Msa0174530:intron | 20.0% |
| !!! | TAAATTCTTTAGGATTACAA+AGG | + | chr1_4:60211071-60211090 | None:intergenic | 20.0% |
| !!! | AGATTTGAAAAAGTTGATTT+TGG | - | chr1_4:60211137-60211156 | Msa0174530:intron | 20.0% |
| !! | GGAAAAGATGTAATATAATT+AGG | - | chr1_4:60211240-60211259 | Msa0174530:intron | 20.0% |
| !!! | TAATATAATTAGGAGTATGT+TGG | - | chr1_4:60211250-60211269 | Msa0174530:intron | 20.0% |
| !! | ACAATCAATTGAAGAATATA+TGG | + | chr1_4:60211420-60211439 | None:intergenic | 20.0% |
| !! | TCAATACTAAATTAGAAAAC+AGG | + | chr1_4:60211665-60211684 | None:intergenic | 20.0% |
| !! | GCTTATAATTTCTTGAAAAA+TGG | - | chr1_4:60212279-60212298 | Msa0174530:intron | 20.0% |
| !!! | ATTTCTACATTACTTTTCTA+AGG | - | chr1_4:60212508-60212527 | Msa0174530:intron | 20.0% |
| !! | ACAAATTATGTTAAATCAGA+AGG | + | chr1_4:60212969-60212988 | None:intergenic | 20.0% |
| ! | AGTTTCATTTCATTTCATCT+TGG | - | chr1_4:60203870-60203889 | Msa0174530:three_prime_UTR | 25.0% |
| ! | GTTTCATTTCATTTCATCTT+GGG | - | chr1_4:60203871-60203890 | Msa0174530:three_prime_UTR | 25.0% |
| !! | AGAACGTACTTCATATTTTT+GGG | + | chr1_4:60203991-60204010 | None:intergenic | 25.0% |
| !!! | TTGACTTTTATAGGTTGATT+TGG | - | chr1_4:60204392-60204411 | Msa0174530:intron | 25.0% |
| !!! | TTTATAGGTTGATTTGGATT+TGG | - | chr1_4:60204398-60204417 | Msa0174530:intron | 25.0% |
| !!! | TTATAGGTTGATTTGGATTT+GGG | - | chr1_4:60204399-60204418 | Msa0174530:intron | 25.0% |
| !! | GCTTGTTTCATTTTATGTTA+TGG | - | chr1_4:60204498-60204517 | Msa0174530:intron | 25.0% |
| !!! | TGAATAATGGATATTTTGTG+TGG | - | chr1_4:60204688-60204707 | Msa0174530:intron | 25.0% |
| !!! | TTTAGTATTATATGGACTAG+AGG | + | chr1_4:60205191-60205210 | None:intergenic | 25.0% |
| ! | TCTAGTCCATATAATACTAA+AGG | - | chr1_4:60205190-60205209 | Msa0174530:intron | 25.0% |
| !! | ACAAGTAATGTCAATTTTGT+TGG | - | chr1_4:60205272-60205291 | Msa0174530:intron | 25.0% |
| ! | CATTAGTACTATACCAAAAA+TGG | + | chr1_4:60205416-60205435 | None:intergenic | 25.0% |
| !! | ACATTTGAAATTTAAGCACA+TGG | + | chr1_4:60205506-60205525 | None:intergenic | 25.0% |
| ! | TATTGGTAGACTTCTTAAAT+TGG | - | chr1_4:60205807-60205826 | Msa0174530:intron | 25.0% |
| ! | TACATTTATGGATGTTTAGA+AGG | - | chr1_4:60205870-60205889 | Msa0174530:intron | 25.0% |
| !! | AGTCAAGACTTCTTTTAAAT+AGG | - | chr1_4:60205952-60205971 | Msa0174530:intron | 25.0% |
| ! | GTAAACATCAATAATTCATG+TGG | + | chr1_4:60206651-60206670 | None:intergenic | 25.0% |
| ! | TTGGTTAATCTATAACTCAA+CGG | - | chr1_4:60206791-60206810 | Msa0174530:intron | 25.0% |
| ! | TTAGTGAATGTTTGTGATAT+TGG | - | chr1_4:60207033-60207052 | Msa0174530:intron | 25.0% |
| ! | TAGTGAATGTTTGTGATATT+GGG | - | chr1_4:60207034-60207053 | Msa0174530:intron | 25.0% |
| ! | TATTGCCTCATTCTATATTT+AGG | - | chr1_4:60207256-60207275 | Msa0174530:intron | 25.0% |
| ! | ATTCTCCTAAATATAGAATG+AGG | + | chr1_4:60207264-60207283 | None:intergenic | 25.0% |
| !!! | TTTTTTACCATGAAGTTAAC+TGG | - | chr1_4:60207320-60207339 | Msa0174530:CDS | 25.0% |
| ! | ATAATTCACTGAAAACTTAC+TGG | + | chr1_4:60207495-60207514 | None:intergenic | 25.0% |
| !! | TTTTCTGTATATTGTTTCAC+AGG | - | chr1_4:60207564-60207583 | Msa0174530:intron | 25.0% |
| ! | TTCATGATGTACCAAATATT+TGG | - | chr1_4:60207605-60207624 | Msa0174530:intron | 25.0% |
| ! | TAAAAATAGCCAAGATACAA+TGG | + | chr1_4:60207677-60207696 | None:intergenic | 25.0% |
| ! | CAACAATATTGTAATAAGAG+AGG | + | chr1_4:60207882-60207901 | None:intergenic | 25.0% |
| !!! | TTTTTTCATCAATTAAGGCA+AGG | + | chr1_4:60207933-60207952 | None:intergenic | 25.0% |
| !!! | CATTTTGAAATTTACAGGTT+AGG | - | chr1_4:60208560-60208579 | Msa0174530:intron | 25.0% |
| ! | CAGGATATCAATATATGTTA+TGG | - | chr1_4:60208679-60208698 | Msa0174530:intron | 25.0% |
| ! | TTAAAACTGCTATCACTTAT+TGG | - | chr1_4:60208862-60208881 | Msa0174530:intron | 25.0% |
| ! | AAGTTTAGTCTATTCTATCT+AGG | - | chr1_4:60209323-60209342 | Msa0174530:intron | 25.0% |
| ! | ATCACATAACTAAAATCTGA+AGG | + | chr1_4:60209362-60209381 | None:intergenic | 25.0% |
| ! | TCATAGATATTAAAGCAATG+GGG | + | chr1_4:60209437-60209456 | None:intergenic | 25.0% |
| ! | GATCATAGATATTAAAGCAA+TGG | + | chr1_4:60209439-60209458 | None:intergenic | 25.0% |
| ! | GGATTTCTTAGAATTTAGAT+CGG | - | chr1_4:60209487-60209506 | Msa0174530:CDS | 25.0% |
| ! | GATTTCTTAGAATTTAGATC+GGG | - | chr1_4:60209488-60209507 | Msa0174530:CDS | 25.0% |
| !!! | TGTTTACAAGTCAGTTTTTT+AGG | + | chr1_4:60209524-60209543 | None:intergenic | 25.0% |
| ! | TTTGTACTGTATTAATCATG+TGG | + | chr1_4:60209766-60209785 | None:intergenic | 25.0% |
| ! | CTGTAATGACAATATTTGTT+TGG | - | chr1_4:60209808-60209827 | Msa0174530:intron | 25.0% |
| ! | GTAATGACAATATTTGTTTG+GGG | - | chr1_4:60209810-60209829 | Msa0174530:intron | 25.0% |
| ! | ATGAAAATTACAACAGGATT+TGG | + | chr1_4:60210132-60210151 | None:intergenic | 25.0% |
| ! | AAACACACCAATAGTTATTA+GGG | + | chr1_4:60210709-60210728 | None:intergenic | 25.0% |
| ! | GTGTATACAACATTAATTAG+AGG | - | chr1_4:60210759-60210778 | Msa0174530:intron | 25.0% |
| ! | TATTGCATTTCAAATGTGAT+TGG | - | chr1_4:60210878-60210897 | Msa0174530:intron | 25.0% |
| ! | ATTGCATTTCAAATGTGATT+GGG | - | chr1_4:60210879-60210898 | Msa0174530:intron | 25.0% |
| ! | ATAAAAAAATTCCACAACAC+AGG | + | chr1_4:60211375-60211394 | None:intergenic | 25.0% |
| ! | ATCAATTGAAGAATATATGG+AGG | + | chr1_4:60211417-60211436 | None:intergenic | 25.0% |
| ! | GTTGTATTATACTGTTTAGT+TGG | - | chr1_4:60211450-60211469 | Msa0174530:intron | 25.0% |
| ! | AACAGATGAAGATATTAACA+TGG | + | chr1_4:60211525-60211544 | None:intergenic | 25.0% |
| !!! | TAACCTTTGTTTTTAGTTAC+TGG | - | chr1_4:60211616-60211635 | Msa0174530:intron | 25.0% |
| !!! | ATTTAGTATTGACATTGTTC+AGG | - | chr1_4:60211673-60211692 | Msa0174530:intron | 25.0% |
| !! | TCTAAAGTTTCAATAACATC+CGG | + | chr1_4:60211704-60211723 | None:intergenic | 25.0% |
| ! | TTATAAGCATCAATTCACAT+GGG | + | chr1_4:60212267-60212286 | None:intergenic | 25.0% |
| ! | ATTATAAGCATCAATTCACA+TGG | + | chr1_4:60212268-60212287 | None:intergenic | 25.0% |
| ! | GAGTAGAAATAATTGAAACA+GGG | + | chr1_4:60212361-60212380 | None:intergenic | 25.0% |
| !! | AAGGTAAATTGATTCTCTTT+AGG | - | chr1_4:60212527-60212546 | Msa0174530:intron | 25.0% |
| !! | AGGTAAATTGATTCTCTTTA+GGG | - | chr1_4:60212528-60212547 | Msa0174530:intron | 25.0% |
| !! | TTCTCTTTAGGGAAAATAAT+TGG | - | chr1_4:60212539-60212558 | Msa0174530:intron | 25.0% |
| !! | TCTCTTTAGGGAAAATAATT+GGG | - | chr1_4:60212540-60212559 | Msa0174530:intron | 25.0% |
| ! | ATTATAAATCTCAGAACTTC+TGG | + | chr1_4:60212724-60212743 | None:intergenic | 25.0% |
| ! | TTAGTAATAGAGATGCTAAA+AGG | - | chr1_4:60212762-60212781 | Msa0174530:intron | 25.0% |
| !! | ACTGGTATTGAAAACAATTA+CGG | - | chr1_4:60212793-60212812 | Msa0174530:CDS | 25.0% |
| !!! | AAATTAACTTGCTTATAGTG+TGG | + | chr1_4:60213088-60213107 | None:intergenic | 25.0% |
| !!! | TACTTCATATTTTTGGGTTG+GGG | + | chr1_4:60203985-60204004 | None:intergenic | 30.0% |
| !!! | GTACTTCATATTTTTGGGTT+GGG | + | chr1_4:60203986-60204005 | None:intergenic | 30.0% |
| ! | GAGAACGTACTTCATATTTT+TGG | + | chr1_4:60203992-60204011 | None:intergenic | 30.0% |
| AAAACTTCTCCATGTTCAAA+AGG | + | chr1_4:60204240-60204259 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTGTTCTTGATGA+TGG | - | chr1_4:60204252-60204271 | Msa0174530:intron | 30.0% |
| ACTTCGTACAAGTGTATTTA+TGG | + | chr1_4:60204305-60204324 | None:intergenic | 30.0% | |
| TCTTGATGTTACACTTACAA+AGG | - | chr1_4:60204437-60204456 | Msa0174530:intron | 30.0% | |
| TACTACTGGGAAAATATATC+AGG | - | chr1_4:60204470-60204489 | Msa0174530:intron | 30.0% | |
| GTTAACTGATTGCTGAATAA+TGG | - | chr1_4:60204675-60204694 | Msa0174530:intron | 30.0% | |
| ! | GTTGGGATTTTTGATGAAAT+AGG | - | chr1_4:60204736-60204755 | Msa0174530:three_prime_UTR | 30.0% |
| TTATGCTCTTTCATAATCGA+TGG | + | chr1_4:60204938-60204957 | None:intergenic | 30.0% | |
| AGTAGTTAAAACGTGTACAT+GGG | + | chr1_4:60205096-60205115 | None:intergenic | 30.0% | |
| TAGTAGTTAAAACGTGTACA+TGG | + | chr1_4:60205097-60205116 | None:intergenic | 30.0% | |
| !!! | TACACGTTTTAACTACTACA+TGG | - | chr1_4:60205099-60205118 | Msa0174530:intron | 30.0% |
| AAGTTATTGACCAATACATC+TGG | - | chr1_4:60205586-60205605 | Msa0174530:intron | 30.0% | |
| AGTTATTGACCAATACATCT+GGG | - | chr1_4:60205587-60205606 | Msa0174530:intron | 30.0% | |
| GAAATAAAATGCACCCAAAA+AGG | - | chr1_4:60205681-60205700 | Msa0174530:CDS | 30.0% | |
| !!! | TAAAAGCATCAAGCCTTTTT+GGG | + | chr1_4:60205697-60205716 | None:intergenic | 30.0% |
| !!! | ATAAAAGCATCAAGCCTTTT+TGG | + | chr1_4:60205698-60205717 | None:intergenic | 30.0% |
| ! | TTTTCTCTCCTTTAGTGTAT+CGG | + | chr1_4:60205763-60205782 | None:intergenic | 30.0% |
| AAATTGGTAGAACTATCTCT+TGG | - | chr1_4:60205823-60205842 | Msa0174530:intron | 30.0% | |
| !! | TTGATATTATGGCATTGGTT+TGG | - | chr1_4:60205991-60206010 | Msa0174530:intron | 30.0% |
| !! | TGATATTATGGCATTGGTTT+GGG | - | chr1_4:60205992-60206011 | Msa0174530:intron | 30.0% |
| TGGTTAATCTATAACTCAAC+GGG | - | chr1_4:60206792-60206811 | Msa0174530:intron | 30.0% | |
| ! | GAGGCAATAATCCTTTAAAA+AGG | + | chr1_4:60207245-60207264 | None:intergenic | 30.0% |
| CTATATTTAGGAGAATACAG+TGG | - | chr1_4:60207268-60207287 | Msa0174530:CDS | 30.0% | |
| ATAATCTCCAGTTAACTTCA+TGG | + | chr1_4:60207330-60207349 | None:intergenic | 30.0% | |
| ! | TGATGTTAGTTTCACTATCT+CGG | - | chr1_4:60207392-60207411 | Msa0174530:CDS | 30.0% |
| ! | AAACTGTGAAAGTTTTTCCT+TGG | + | chr1_4:60207463-60207482 | None:intergenic | 30.0% |
| ! | AGTTTTCAGTGAATTATGCT+TGG | - | chr1_4:60207498-60207517 | Msa0174530:intron | 30.0% |
| !! | TTTTTAGTGCCATTGTATCT+TGG | - | chr1_4:60207665-60207684 | Msa0174530:intron | 30.0% |
| ! | ATTGTTTTCCTCTTAATGTC+CGG | - | chr1_4:60207706-60207725 | Msa0174530:intron | 30.0% |
| ! | TTGATTCTGAAAATAGAAGC+CGG | + | chr1_4:60207728-60207747 | None:intergenic | 30.0% |
| !! | AGATAAACTCAAGTTGACAA+CGG | + | chr1_4:60208055-60208074 | None:intergenic | 30.0% |
| CATATGTTGGAATCTCTTAA+TGG | - | chr1_4:60208229-60208248 | Msa0174530:intron | 30.0% | |
| AATTGAAACACGTCATATGT+TGG | - | chr1_4:60208280-60208299 | Msa0174530:intron | 30.0% | |
| !!! | CAGAGCATTTTGAAATTTAC+AGG | - | chr1_4:60208555-60208574 | Msa0174530:intron | 30.0% |
| GTTCTTGGGATAAATATCAA+GGG | + | chr1_4:60208657-60208676 | None:intergenic | 30.0% | |
| TGTTCTTGGGATAAATATCA+AGG | + | chr1_4:60208658-60208677 | None:intergenic | 30.0% | |
| ! | TGAATATGGCATCAAACTTT+TGG | + | chr1_4:60208805-60208824 | None:intergenic | 30.0% |
| CAGATTATTGCTAGTGAATA+TGG | + | chr1_4:60208819-60208838 | None:intergenic | 30.0% | |
| !! | ATCTGATTTTGACATCTTTG+CGG | - | chr1_4:60208834-60208853 | Msa0174530:intron | 30.0% |
| ! | CTAGAAGCACATACAATTTA+TGG | - | chr1_4:60209300-60209319 | Msa0174530:intron | 30.0% |
| TCTATTCTATCTAGGAAGTT+TGG | - | chr1_4:60209331-60209350 | Msa0174530:intron | 30.0% | |
| TGGACTTTCTGTGATAAAAT+TGG | - | chr1_4:60209466-60209485 | Msa0174530:intron | 30.0% | |
| ! | TATCTAGAGTGTGATCTTAT+TGG | - | chr1_4:60209615-60209634 | Msa0174530:CDS | 30.0% |
| ! | TGATCTTATTGGCCTAATAA+TGG | - | chr1_4:60209626-60209645 | Msa0174530:CDS | 30.0% |
| ! | GATCTTATTGGCCTAATAAT+GGG | - | chr1_4:60209627-60209646 | Msa0174530:CDS | 30.0% |
| GTAAATACTACTATCCAATG+TGG | - | chr1_4:60209734-60209753 | Msa0174530:intron | 30.0% | |
| CACAACAAGGATAATGATTA+GGG | + | chr1_4:60210195-60210214 | None:intergenic | 30.0% | |
| TCACAACAAGGATAATGATT+AGG | + | chr1_4:60210196-60210215 | None:intergenic | 30.0% | |
| AATATGGCTTATCTGTGAAA+GGG | + | chr1_4:60210400-60210419 | None:intergenic | 30.0% | |
| AAATATGGCTTATCTGTGAA+AGG | + | chr1_4:60210401-60210420 | None:intergenic | 30.0% | |
| TATCTGATGGGAAAGAAATA+TGG | + | chr1_4:60210416-60210435 | None:intergenic | 30.0% | |
| ! | AAATCTCAGTTTTCTTGTTC+TGG | - | chr1_4:60210472-60210491 | Msa0174530:intron | 30.0% |
| ! | AATCTCAGTTTTCTTGTTCT+GGG | - | chr1_4:60210473-60210492 | Msa0174530:intron | 30.0% |
| TACATAAAATGATTCCCTGA+TGG | + | chr1_4:60210551-60210570 | None:intergenic | 30.0% | |
| ATCACAGAACATAATGAATC+AGG | + | chr1_4:60210587-60210606 | None:intergenic | 30.0% | |
| TTAGGGGTAGTTTAGTAAAA+GGG | + | chr1_4:60210692-60210711 | None:intergenic | 30.0% | |
| ATTAGGGGTAGTTTAGTAAA+AGG | + | chr1_4:60210693-60210712 | None:intergenic | 30.0% | |
| AAACTACCCCTAATAACTAT+TGG | - | chr1_4:60210699-60210718 | Msa0174530:intron | 30.0% | |
| AACACACCAATAGTTATTAG+GGG | + | chr1_4:60210708-60210727 | None:intergenic | 30.0% | |
| GAAACACACCAATAGTTATT+AGG | + | chr1_4:60210710-60210729 | None:intergenic | 30.0% | |
| !!! | CTGAGACACTTATTTTGAAA+CGG | - | chr1_4:60210849-60210868 | Msa0174530:intron | 30.0% |
| ATTCTTCCTTACTGTAGATA+AGG | - | chr1_4:60210913-60210932 | Msa0174530:intron | 30.0% | |
| TTCTTCCTTACTGTAGATAA+GGG | - | chr1_4:60210914-60210933 | Msa0174530:intron | 30.0% | |
| !!! | TTCTTTTTTCACCTTTTGCT+AGG | + | chr1_4:60211019-60211038 | None:intergenic | 30.0% |
| GAGGTAGTAGTAAATTCTTT+AGG | + | chr1_4:60211081-60211100 | None:intergenic | 30.0% | |
| ! | AAGTAATTTTCTCTCCTGAA+GGG | + | chr1_4:60211186-60211205 | None:intergenic | 30.0% |
| ! | TAAGTAATTTTCTCTCCTGA+AGG | + | chr1_4:60211187-60211206 | None:intergenic | 30.0% |
| GAGTATTTATTACAGATTGC+AGG | - | chr1_4:60211219-60211238 | Msa0174530:intron | 30.0% | |
| GATGTCGTTGAAAATTTGAA+TGG | - | chr1_4:60211286-60211305 | Msa0174530:intron | 30.0% | |
| ! | TTGAATGGAGTCTTATAAGA+AGG | - | chr1_4:60211301-60211320 | Msa0174530:intron | 30.0% |
| ! | TGAATGGAGTCTTATAAGAA+GGG | - | chr1_4:60211302-60211321 | Msa0174530:intron | 30.0% |
| ! | AAGAAGGGGAAATGATATTT+TGG | - | chr1_4:60211317-60211336 | Msa0174530:intron | 30.0% |
| !!! | GAAATGATATTTTGGAACTG+AGG | - | chr1_4:60211325-60211344 | Msa0174530:intron | 30.0% |
| TATAATGAAAACCTGTGTTG+TGG | - | chr1_4:60211361-60211380 | Msa0174530:intron | 30.0% | |
| CAGTATAATACAACACACAA+AGG | + | chr1_4:60211444-60211463 | None:intergenic | 30.0% | |
| CATCCAGTAACTAAAAACAA+AGG | + | chr1_4:60211622-60211641 | None:intergenic | 30.0% | |
| ! | ATTGAAACTTTAGAAGAAGC+TGG | - | chr1_4:60211710-60211729 | Msa0174530:intron | 30.0% |
| ! | TTGAAACTTTAGAAGAAGCT+GGG | - | chr1_4:60211711-60211730 | Msa0174530:intron | 30.0% |
| ! | TATATTTTCCTGCTTGGATA+GGG | - | chr1_4:60211777-60211796 | Msa0174530:intron | 30.0% |
| ! | GGTACTTTTCAGTTATGAAT+TGG | - | chr1_4:60212066-60212085 | Msa0174530:intron | 30.0% |
| ATTAACACAGATGGTGTAAA+CGG | + | chr1_4:60212137-60212156 | None:intergenic | 30.0% | |
| TTAATACTGTGAGATGAAGA+TGG | - | chr1_4:60212152-60212171 | Msa0174530:intron | 30.0% | |
| ATCAATTCACATGGGAATTT+CGG | + | chr1_4:60212259-60212278 | None:intergenic | 30.0% | |
| CGAGTAGAAATAATTGAAAC+AGG | + | chr1_4:60212362-60212381 | None:intergenic | 30.0% | |
| GATCTACGATTCTTTACTAT+AGG | - | chr1_4:60212481-60212500 | Msa0174530:CDS | 30.0% | |
| AAGCTATACAACTAAGGAAA+AGG | + | chr1_4:60212920-60212939 | None:intergenic | 30.0% | |
| ! | TAAATCAGAAGGCATGATAT+TGG | + | chr1_4:60212958-60212977 | None:intergenic | 30.0% |
| TGATTGTTTGATGTGTATAG+AGG | - | chr1_4:60213033-60213052 | Msa0174530:CDS | 30.0% | |
| TTAGCGAGCATAAAAAGAAA+AGG | + | chr1_4:60213219-60213238 | None:intergenic | 30.0% | |
| ! | TCTTTTTATGCTCGCTAATT+AGG | - | chr1_4:60213221-60213240 | Msa0174530:CDS | 30.0% |
| TACTTAGTCACTCATTATGA+AGG | - | chr1_4:60213323-60213342 | Msa0174530:five_prime_UTR | 30.0% | |
| TGTTTGTGTTTATATCCGAG+CGG | + | chr1_4:60203936-60203955 | None:intergenic | 35.0% | |
| GGAATGAATGAATGAGTTGT+AGG | + | chr1_4:60203964-60203983 | None:intergenic | 35.0% | |
| !!! | CGTACTTCATATTTTTGGGT+TGG | + | chr1_4:60203987-60204006 | None:intergenic | 35.0% |
| !!! | GTTTTTGTTCTTGATGATGG+CGG | - | chr1_4:60204255-60204274 | Msa0174530:intron | 35.0% |
| TTATCTCGGAAAAACTGTTC+AGG | - | chr1_4:60204616-60204635 | Msa0174530:intron | 35.0% | |
| AGATGAAGTTTCTGAGTTGT+TGG | - | chr1_4:60204718-60204737 | Msa0174530:intron | 35.0% | |
| GATGAAGTTTCTGAGTTGTT+GGG | - | chr1_4:60204719-60204738 | Msa0174530:intron | 35.0% | |
| ! | GGGATTTTTGATGAAATAGG+TGG | - | chr1_4:60204739-60204758 | Msa0174530:three_prime_UTR | 35.0% |
| AATCCAGTTTCTGATTGCAT+CGG | + | chr1_4:60204777-60204796 | None:intergenic | 35.0% | |
| AATCAGAAACTGGATTGAGT+CGG | - | chr1_4:60204781-60204800 | Msa0174530:CDS | 35.0% | |
| GTAGTTAAAACGTGTACATG+GGG | + | chr1_4:60205095-60205114 | None:intergenic | 35.0% | |
| AAGTCATATCCCAGATGTAT+TGG | + | chr1_4:60205599-60205618 | None:intergenic | 35.0% | |
| GGATATGACTTTGATACTTC+AGG | - | chr1_4:60205608-60205627 | Msa0174530:intron | 35.0% | |
| GATACTTCAGGATACACTAT+TGG | - | chr1_4:60205620-60205639 | Msa0174530:intron | 35.0% | |
| AAAGATGACCGATACACTAA+AGG | - | chr1_4:60205752-60205771 | Msa0174530:intron | 35.0% | |
| GATACACTAAAGGAGAGAAA+AGG | - | chr1_4:60205762-60205781 | Msa0174530:intron | 35.0% | |
| TTTATGGATGTTTAGAAGGC+TGG | - | chr1_4:60205874-60205893 | Msa0174530:intron | 35.0% | |
| ! | TACGATCACTAGTTTCTCTT+TGG | - | chr1_4:60206090-60206109 | Msa0174530:intron | 35.0% |
| TACTCTCATTATTCCTTCTC+AGG | - | chr1_4:60206244-60206263 | Msa0174530:intron | 35.0% | |
| ACTCTCATTATTCCTTCTCA+GGG | - | chr1_4:60206245-60206264 | Msa0174530:intron | 35.0% | |
| AGGTATATTATTGCACCAGT+TGG | - | chr1_4:60206495-60206514 | Msa0174530:intron | 35.0% | |
| GTACTACAACCTAAAGACTT+TGG | + | chr1_4:60206563-60206582 | None:intergenic | 35.0% | |
| TTACCACAGTTACGAAATTC+AGG | - | chr1_4:60206667-60206686 | Msa0174530:intron | 35.0% | |
| !! | CTTTAAAGTCGCATAGACTT+GGG | + | chr1_4:60206771-60206790 | None:intergenic | 35.0% |
| !! | ACTTTAAAGTCGCATAGACT+TGG | + | chr1_4:60206772-60206791 | None:intergenic | 35.0% |
| !! | AGTCTATGCGACTTTAAAGT+TGG | - | chr1_4:60206772-60206791 | Msa0174530:intron | 35.0% |
| !!! | GTTCACTGCAGTGTTTTAAT+AGG | + | chr1_4:60206972-60206991 | None:intergenic | 35.0% |
| ACTGCAGTGAACTTTAGTAA+GGG | - | chr1_4:60206980-60206999 | Msa0174530:CDS | 35.0% | |
| ACTTTAGTAAGGGTAATGCT+AGG | - | chr1_4:60206990-60207009 | Msa0174530:CDS | 35.0% | |
| ACCAAGAAACCAAATTTCCT+CGG | + | chr1_4:60207065-60207084 | None:intergenic | 35.0% | |
| ATTGTGGTTGTTAAGACCAA+AGG | - | chr1_4:60207099-60207118 | Msa0174530:intron | 35.0% | |
| TTGTGGTTGTTAAGACCAAA+GGG | - | chr1_4:60207100-60207119 | Msa0174530:intron | 35.0% | |
| AAGCTACTTATGTGCTTATG+TGG | - | chr1_4:60207146-60207165 | Msa0174530:CDS | 35.0% | |
| TTTGACAACTTATGTGACAC+TGG | - | chr1_4:60207170-60207189 | Msa0174530:intron | 35.0% | |
| TTGCTTCTCCAATGAGATTA+TGG | - | chr1_4:60207201-60207220 | Msa0174530:intron | 35.0% | |
| TTGTCAGACCATAATCTCAT+TGG | + | chr1_4:60207212-60207231 | None:intergenic | 35.0% | |
| ! | ATCAAGCGACTCCTTTTTAA+AGG | - | chr1_4:60207231-60207250 | Msa0174530:intron | 35.0% |
| ACTGAAAACTTACTGGAACA+TGG | + | chr1_4:60207488-60207507 | None:intergenic | 35.0% | |
| AGGGGAATATGCCAAATATT+TGG | + | chr1_4:60207619-60207638 | None:intergenic | 35.0% | |
| TAAGCTGCTGTAAAATTGAG+TGG | + | chr1_4:60207759-60207778 | None:intergenic | 35.0% | |
| TACAGCAGCTTAACTTACTT+AGG | - | chr1_4:60207767-60207786 | Msa0174530:intron | 35.0% | |
| !! | GATAAACTCAAGTTGACAAC+GGG | + | chr1_4:60208054-60208073 | None:intergenic | 35.0% |
| ! | TAGCATAAGCACAAGTCTTT+TGG | - | chr1_4:60208104-60208123 | Msa0174530:intron | 35.0% |
| !!! | AAGCACAAGTCTTTTGGTTT+TGG | - | chr1_4:60208110-60208129 | Msa0174530:CDS | 35.0% |
| !!! | AGCACAAGTCTTTTGGTTTT+GGG | - | chr1_4:60208111-60208130 | Msa0174530:CDS | 35.0% |
| GTCATATGTTGGTCATACTT+GGG | - | chr1_4:60208291-60208310 | Msa0174530:intron | 35.0% | |
| TAGTACTAACAGATTCAGTG+AGG | + | chr1_4:60208478-60208497 | None:intergenic | 35.0% | |
| ATATTTATCCCAAGAACAGC+AGG | - | chr1_4:60208660-60208679 | Msa0174530:CDS | 35.0% | |
| ATTGATATCCTGCTGTTCTT+GGG | + | chr1_4:60208671-60208690 | None:intergenic | 35.0% | |
| TATTGATATCCTGCTGTTCT+TGG | + | chr1_4:60208672-60208691 | None:intergenic | 35.0% | |
| CTGCCGAATATCAACATATT+TGG | - | chr1_4:60208928-60208947 | Msa0174530:intron | 35.0% | |
| TTGGTTTCTTCTCATTATGC+AGG | - | chr1_4:60209185-60209204 | Msa0174530:intron | 35.0% | |
| AATATCTATGATCGAACAGC+TGG | - | chr1_4:60209446-60209465 | Msa0174530:intron | 35.0% | |
| TAGATAGCCAGTAACGTAAA+GGG | + | chr1_4:60209601-60209620 | None:intergenic | 35.0% | |
| ATTGTTCTCTCTGGCATATT+TGG | + | chr1_4:60209918-60209937 | None:intergenic | 35.0% | |
| AGAGAACAATGTTCCTTACT+TGG | - | chr1_4:60209928-60209947 | Msa0174530:intron | 35.0% | |
| GAGAACAATGTTCCTTACTT+GGG | - | chr1_4:60209929-60209948 | Msa0174530:intron | 35.0% | |
| AGAACAATGTTCCTTACTTG+GGG | - | chr1_4:60209930-60209949 | Msa0174530:intron | 35.0% | |
| !! | TACAACAGGATTTGGTGTTT+GGG | + | chr1_4:60210124-60210143 | None:intergenic | 35.0% |
| !! | TTACAACAGGATTTGGTGTT+TGG | + | chr1_4:60210125-60210144 | None:intergenic | 35.0% |
| TCTGGCATGAAAATTACAAC+AGG | + | chr1_4:60210138-60210157 | None:intergenic | 35.0% | |
| ! | TGTTGTAATTTTCATGCCAG+AGG | - | chr1_4:60210137-60210156 | Msa0174530:intron | 35.0% |
| GATAATGATTAGGGAAACTG+GGG | + | chr1_4:60210186-60210205 | None:intergenic | 35.0% | |
| GGATAATGATTAGGGAAACT+GGG | + | chr1_4:60210187-60210206 | None:intergenic | 35.0% | |
| AGGATAATGATTAGGGAAAC+TGG | + | chr1_4:60210188-60210207 | None:intergenic | 35.0% | |
| TAGCTACATCACATACAGTT+TGG | + | chr1_4:60210318-60210337 | None:intergenic | 35.0% | |
| CTGAATGACACATGTCAATA+AGG | - | chr1_4:60210510-60210529 | Msa0174530:intron | 35.0% | |
| ATGTGTGCAGAAACCTTAAA+CGG | + | chr1_4:60210634-60210653 | None:intergenic | 35.0% | |
| TCTTCCTTACTGTAGATAAG+GGG | - | chr1_4:60210915-60210934 | Msa0174530:intron | 35.0% | |
| ! | TTTTCACCTTTTGCTAGGAA+GGG | + | chr1_4:60211014-60211033 | None:intergenic | 35.0% |
| ! | TTTTTCACCTTTTGCTAGGA+AGG | + | chr1_4:60211015-60211034 | None:intergenic | 35.0% |
| ! | GGTCTTATATTTAGAGACAG+AGG | + | chr1_4:60211100-60211119 | None:intergenic | 35.0% |
| ATCTCTTGATTTACTCGATG+TGG | + | chr1_4:60211121-60211140 | None:intergenic | 35.0% | |
| ! | GAATGGAGTCTTATAAGAAG+GGG | - | chr1_4:60211303-60211322 | Msa0174530:intron | 35.0% |
| ! | TTTGGAACTGAGGTAGTATA+TGG | - | chr1_4:60211335-60211354 | Msa0174530:intron | 35.0% |
| TTCATCTGTTCCTAATTACC+AGG | - | chr1_4:60211535-60211554 | Msa0174530:intron | 35.0% | |
| AATTGCCATACCTGGTAATT+AGG | + | chr1_4:60211548-60211567 | None:intergenic | 35.0% | |
| AATTACCAGGTATGGCAATT+CGG | - | chr1_4:60211548-60211567 | Msa0174530:intron | 35.0% | |
| TGACATTGTTCAGGTAAATC+CGG | - | chr1_4:60211682-60211701 | Msa0174530:intron | 35.0% | |
| ! | GTATATTTTCCTGCTTGGAT+AGG | - | chr1_4:60211776-60211795 | Msa0174530:intron | 35.0% |
| GCACAAGAGAGAATTTCTTA+AGG | + | chr1_4:60211951-60211970 | None:intergenic | 35.0% | |
| CCTACATAATATGGATGACT+TGG | + | chr1_4:60211988-60212007 | None:intergenic | 35.0% | |
| CCAAGTCATCCATATTATGT+AGG | - | chr1_4:60211985-60212004 | Msa0174530:intron | 35.0% | |
| AATTGCACGCCTACATAATA+TGG | + | chr1_4:60211997-60212016 | None:intergenic | 35.0% | |
| TTCATCCCGAATTCAAATCT+CGG | - | chr1_4:60212016-60212035 | Msa0174530:intron | 35.0% | |
| !!! | AGACCATCTGCTTTGTTTTT+AGG | - | chr1_4:60212045-60212064 | Msa0174530:intron | 35.0% |
| GTACCTAAAAACAAAGCAGA+TGG | + | chr1_4:60212051-60212070 | None:intergenic | 35.0% | |
| TCTCACAGTATTAACACAGA+TGG | + | chr1_4:60212146-60212165 | None:intergenic | 35.0% | |
| CAATATGAGACCTACAGTAT+AGG | + | chr1_4:60212406-60212425 | None:intergenic | 35.0% | |
| CTATACTGTAGGTCTCATAT+TGG | - | chr1_4:60212404-60212423 | Msa0174530:CDS | 35.0% | |
| ATCACTAGCATTCATGAGAA+TGG | - | chr1_4:60212453-60212472 | Msa0174530:CDS | 35.0% | |
| CTGATTCATATCAGTCACAA+AGG | - | chr1_4:60212664-60212683 | Msa0174530:intron | 35.0% | |
| ! | ACTTCTGGTGATGAAATACA+TGG | + | chr1_4:60212709-60212728 | None:intergenic | 35.0% |
| TGCTAAAAGGTTGCAAATAC+TGG | - | chr1_4:60212775-60212794 | Msa0174530:CDS | 35.0% | |
| GTTGTAACTTTGTCAAGCTA+AGG | - | chr1_4:60212824-60212843 | Msa0174530:CDS | 35.0% | |
| ! | AGTGCTGAATTTATCAGCTA+AGG | + | chr1_4:60212863-60212882 | None:intergenic | 35.0% |
| CTGATAAATTCAGCACTTCT+TGG | - | chr1_4:60212866-60212885 | Msa0174530:intron | 35.0% | |
| CCATACTATTTAGCTAACTG+TGG | + | chr1_4:60212892-60212911 | None:intergenic | 35.0% | |
| CCACAGTTAGCTAAATAGTA+TGG | - | chr1_4:60212889-60212908 | Msa0174530:intron | 35.0% | |
| ATACAACTAAGGAAAAGGTC+TGG | + | chr1_4:60212915-60212934 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCGATCTTCATTGC+AGG | - | chr1_4:60212993-60213012 | Msa0174530:CDS | 35.0% |
| !!! | AAGGTTGATATTTTGGTGGG+AGG | + | chr1_4:60203912-60203931 | None:intergenic | 40.0% |
| !!! | GGGAAGGTTGATATTTTGGT+GGG | + | chr1_4:60203915-60203934 | None:intergenic | 40.0% |
| AAAATATCAACCTTCCCGCT+CGG | - | chr1_4:60203918-60203937 | Msa0174530:three_prime_UTR | 40.0% | |
| GTTTGTGTTTATATCCGAGC+GGG | + | chr1_4:60203935-60203954 | None:intergenic | 40.0% | |
| ATGAAGTACGTTCTCATCTC+CGG | - | chr1_4:60203997-60204016 | Msa0174530:three_prime_UTR | 40.0% | |
| !! | AGAGTGAGAACCGATTTTGA+TGG | + | chr1_4:60204106-60204125 | None:intergenic | 40.0% |
| AAACGGTGAATGATGCGAAA+CGG | + | chr1_4:60204157-60204176 | None:intergenic | 40.0% | |
| CCAGCGTCAATGTTCAAATA+CGG | + | chr1_4:60204207-60204226 | None:intergenic | 40.0% | |
| ! | ACCATGTCTCCTTTTGAACA+TGG | - | chr1_4:60204228-60204247 | Msa0174530:intron | 40.0% |
| TCCATGTTCAAAAGGAGACA+TGG | + | chr1_4:60204232-60204251 | None:intergenic | 40.0% | |
| TTCTTAGTCTGTGCTTGAGA+AGG | - | chr1_4:60204580-60204599 | Msa0174530:intron | 40.0% | |
| CAATCACACAAACATCAGCA+GGG | + | chr1_4:60204838-60204857 | None:intergenic | 40.0% | |
| TCAATCACACAAACATCAGC+AGG | + | chr1_4:60204839-60204858 | None:intergenic | 40.0% | |
| GATGTTTGTGTGATTGAGCT+TGG | - | chr1_4:60204842-60204861 | Msa0174530:intron | 40.0% | |
| ! | TGAGTCTATGCCGTTTATTG+AGG | - | chr1_4:60204987-60205006 | Msa0174530:intron | 40.0% |
| ACGGCAATTATCCTTTCAAG+TGG | - | chr1_4:60205014-60205033 | Msa0174530:intron | 40.0% | |
| ! | CGGCAATTATCCTTTCAAGT+GGG | - | chr1_4:60205015-60205034 | Msa0174530:intron | 40.0% |
| CATTGTTCTCATGTGTGATG+AGG | - | chr1_4:60205140-60205159 | Msa0174530:intron | 40.0% | |
| CTCGCACTTACCTAAGTATT+TGG | + | chr1_4:60205323-60205342 | None:intergenic | 40.0% | |
| CTAAAGGAGAGAAAAGGTTG+CGG | - | chr1_4:60205768-60205787 | Msa0174530:intron | 40.0% | |
| TAAAGGAGAGAAAAGGTTGC+GGG | - | chr1_4:60205769-60205788 | Msa0174530:intron | 40.0% | |
| GGACATTCACTTGGTCATAT+TGG | - | chr1_4:60205790-60205809 | Msa0174530:intron | 40.0% | |
| ! | TAGAAGGCTGGTGATGAAAT+TGG | - | chr1_4:60205886-60205905 | Msa0174530:intron | 40.0% |
| CGAGACAAGATGACATTTCA+TGG | + | chr1_4:60206210-60206229 | None:intergenic | 40.0% | |
| ATGGTTGCTCCAAAGTCTTT+AGG | - | chr1_4:60206551-60206570 | Msa0174530:intron | 40.0% | |
| CACTGCAGTGAACTTTAGTA+AGG | - | chr1_4:60206979-60206998 | Msa0174530:CDS | 40.0% | |
| TAGTAAGGGTAATGCTAGGA+TGG | - | chr1_4:60206994-60207013 | Msa0174530:CDS | 40.0% | |
| AGTAAGGGTAATGCTAGGAT+GGG | - | chr1_4:60206995-60207014 | Msa0174530:CDS | 40.0% | |
| GAAACCAAATTTCCTCGGTA+AGG | + | chr1_4:60207060-60207079 | None:intergenic | 40.0% | |
| ! | ACCGAGGAAATTTGGTTTCT+TGG | - | chr1_4:60207061-60207080 | Msa0174530:intron | 40.0% |
| TGTGGTTGTTAAGACCAAAG+GGG | - | chr1_4:60207101-60207120 | Msa0174530:CDS | 40.0% | |
| AGACTCACTCTAAGTAACAG+GGG | + | chr1_4:60207637-60207656 | None:intergenic | 40.0% | |
| GAGACTCACTCTAAGTAACA+GGG | + | chr1_4:60207638-60207657 | None:intergenic | 40.0% | |
| AGAGACTCACTCTAAGTAAC+AGG | + | chr1_4:60207639-60207658 | None:intergenic | 40.0% | |
| AATAGAAGCCGGACATTAAG+AGG | + | chr1_4:60207717-60207736 | None:intergenic | 40.0% | |
| CTGCTGTAAAATTGAGTGGT+GGG | + | chr1_4:60207755-60207774 | None:intergenic | 40.0% | |
| TCAACGCACTCTTCATTGTT+GGG | + | chr1_4:60207968-60207987 | None:intergenic | 40.0% | |
| ATCAACGCACTCTTCATTGT+TGG | + | chr1_4:60207969-60207988 | None:intergenic | 40.0% | |
| !!! | GCACAAGTCTTTTGGTTTTG+GGG | - | chr1_4:60208112-60208131 | Msa0174530:CDS | 40.0% |
| CGTCATATGTTGGTCATACT+TGG | - | chr1_4:60208290-60208309 | Msa0174530:intron | 40.0% | |
| TATGTTGGTCATACTTGGGA+AGG | - | chr1_4:60208295-60208314 | Msa0174530:intron | 40.0% | |
| TTTACAGGTTAGGATTGCCA+TGG | - | chr1_4:60208570-60208589 | Msa0174530:intron | 40.0% | |
| ! | ACCAACATATTTTCCCACCA+TGG | + | chr1_4:60208590-60208609 | None:intergenic | 40.0% |
| CATTGAGACCATCAATTGAC+TGG | - | chr1_4:60209089-60209108 | Msa0174530:intron | 40.0% | |
| ATTGTGCACTGTCATCTTCA+AGG | + | chr1_4:60209129-60209148 | None:intergenic | 40.0% | |
| ! | TCTATCTAGGAAGTTTGGTG+AGG | - | chr1_4:60209336-60209355 | Msa0174530:intron | 40.0% |
| AAAAACCGTCTAGCACATAG+CGG | + | chr1_4:60209386-60209405 | None:intergenic | 40.0% | |
| CTAGATAGCCAGTAACGTAA+AGG | + | chr1_4:60209602-60209621 | None:intergenic | 40.0% | |
| ! | CTTATTGGCCTAATAATGGG+TGG | - | chr1_4:60209630-60209649 | Msa0174530:CDS | 40.0% |
| CCATAAGACCACCCATTATT+AGG | + | chr1_4:60209641-60209660 | None:intergenic | 40.0% | |
| !! | CCTAATAATGGGTGGTCTTA+TGG | - | chr1_4:60209638-60209657 | Msa0174530:CDS | 40.0% |
| CCAATATTGTGAGATTGAGC+AGG | + | chr1_4:60209711-60209730 | None:intergenic | 40.0% | |
| CCTGCTCAATCTCACAATAT+TGG | - | chr1_4:60209708-60209727 | Msa0174530:intron | 40.0% | |
| GTAAGGAACATTGTTCTCTC+TGG | + | chr1_4:60209927-60209946 | None:intergenic | 40.0% | |
| !!! | TCTATTCTTAGGTTTTGGGC+TGG | - | chr1_4:60210070-60210089 | Msa0174530:intron | 40.0% |
| !!! | CTATTCTTAGGTTTTGGGCT+GGG | - | chr1_4:60210071-60210090 | Msa0174530:intron | 40.0% |
| ATGCCTGCTAGTCATAAACA+GGG | - | chr1_4:60210215-60210234 | Msa0174530:intron | 40.0% | |
| CTAGTCATAAACAGGGTTCT+AGG | - | chr1_4:60210222-60210241 | Msa0174530:intron | 40.0% | |
| CACATGTCAATAAGGATGTC+TGG | - | chr1_4:60210518-60210537 | Msa0174530:intron | 40.0% | |
| !!! | AAACGGCACTCGTTTTGAAA+CGG | + | chr1_4:60210617-60210636 | None:intergenic | 40.0% |
| !! | TTCAAAACGAGTGCCGTTTA+AGG | - | chr1_4:60210618-60210637 | Msa0174530:intron | 40.0% |
| GAAACCCCTTATCTACAGTA+AGG | + | chr1_4:60210922-60210941 | None:intergenic | 40.0% | |
| ACTGTAGATAAGGGGTTTCA+AGG | - | chr1_4:60210923-60210942 | Msa0174530:intron | 40.0% | |
| CTGTAGATAAGGGGTTTCAA+GGG | - | chr1_4:60210924-60210943 | Msa0174530:intron | 40.0% | |
| TGTTGAGAAGTTTACCCTTC+AGG | - | chr1_4:60211169-60211188 | Msa0174530:intron | 40.0% | |
| CTGTTCCTAATTACCAGGTA+TGG | - | chr1_4:60211540-60211559 | Msa0174530:intron | 40.0% | |
| ATTCGGAGTATGTGGATGAA+CGG | - | chr1_4:60211565-60211584 | Msa0174530:intron | 40.0% | |
| CAGGTACTACACATGTTTGT+AGG | + | chr1_4:60211646-60211665 | None:intergenic | 40.0% | |
| GAAGCTGGGCTAAAATTTGT+TGG | - | chr1_4:60211725-60211744 | Msa0174530:intron | 40.0% | |
| !! | TGGGCTAAAATTTGTTGGCA+GGG | - | chr1_4:60211730-60211749 | Msa0174530:intron | 40.0% |
| !! | TGGAGGTATATTTTCCTGCT+TGG | - | chr1_4:60211771-60211790 | Msa0174530:intron | 40.0% |
| TATCAAAACCCTATCCAAGC+AGG | + | chr1_4:60211788-60211807 | None:intergenic | 40.0% | |
| ! | CAGGTTTTCAACTACAGTTC+TGG | + | chr1_4:60211815-60211834 | None:intergenic | 40.0% |
| CAGAACTGTAGTTGAAAACC+TGG | - | chr1_4:60211813-60211832 | Msa0174530:intron | 40.0% | |
| AACTGTAGTTGAAAACCTGG+CGG | - | chr1_4:60211816-60211835 | Msa0174530:intron | 40.0% | |
| TGAGATGAAGATGGTCTGTT+TGG | - | chr1_4:60212161-60212180 | Msa0174530:intron | 40.0% | |
| GCAAGCAATAACATGACATC+AGG | + | chr1_4:60212219-60212238 | None:intergenic | 40.0% | |
| ATTCACATGGGAATTTCGGT+AGG | + | chr1_4:60212255-60212274 | None:intergenic | 40.0% | |
| AGGGAAAATAATTGGGAGCA+AGG | - | chr1_4:60212547-60212566 | Msa0174530:intron | 40.0% | |
| GGGAAAATAATTGGGAGCAA+GGG | - | chr1_4:60212548-60212567 | Msa0174530:intron | 40.0% | |
| AATAATTGGGAGCAAGGGAA+TGG | - | chr1_4:60212553-60212572 | Msa0174530:intron | 40.0% | |
| ATAATTGGGAGCAAGGGAAT+GGG | - | chr1_4:60212554-60212573 | Msa0174530:intron | 40.0% | |
| TAGGAACTAGGAACTGAAGT+AGG | - | chr1_4:60212580-60212599 | Msa0174530:intron | 40.0% | |
| GTAACTTTGTCAAGCTAAGG+AGG | - | chr1_4:60212827-60212846 | Msa0174530:CDS | 40.0% | |
| CACAGCAAGCTATACAACTA+AGG | + | chr1_4:60212926-60212945 | None:intergenic | 40.0% | |
| !! | CTTAGTTGTATAGCTTGCTG+TGG | - | chr1_4:60212924-60212943 | Msa0174530:intron | 40.0% |
| ATGTGTATAGAGGTCTGAAG+CGG | - | chr1_4:60213043-60213062 | Msa0174530:intron | 40.0% | |
| TTTATAAGCCTGTGAGTGTC+AGG | + | chr1_4:60213133-60213152 | None:intergenic | 40.0% | |
| !!! | CGGGAAGGTTGATATTTTGG+TGG | + | chr1_4:60203916-60203935 | None:intergenic | 45.0% |
| !!! | GAGCGGGAAGGTTGATATTT+TGG | + | chr1_4:60203919-60203938 | None:intergenic | 45.0% |
| !! | GTGAGAACCGATTTTGATGG+AGG | + | chr1_4:60204103-60204122 | None:intergenic | 45.0% |
| CGGTTACGAAGAAGTTGAGT+TGG | + | chr1_4:60204137-60204156 | None:intergenic | 45.0% | |
| CCGTATTTGAACATTGACGC+TGG | - | chr1_4:60204204-60204223 | Msa0174530:three_prime_UTR | 45.0% | |
| ! | CTGATTGCATCGGTGATATG+CGG | + | chr1_4:60204767-60204786 | None:intergenic | 45.0% |
| TCACCGATGCAATCAGAAAC+TGG | - | chr1_4:60204771-60204790 | Msa0174530:exon | 45.0% | |
| GGTCTTCATTTCCATCAACC+GGG | + | chr1_4:60204817-60204836 | None:intergenic | 45.0% | |
| GGGTCTTCATTTCCATCAAC+CGG | + | chr1_4:60204818-60204837 | None:intergenic | 45.0% | |
| GTTTGTGTGATTGAGCTTGG+AGG | - | chr1_4:60204845-60204864 | Msa0174530:intron | 45.0% | |
| ! | TGCCGTTTATTGAGGCTCTA+CGG | - | chr1_4:60204995-60205014 | Msa0174530:intron | 45.0% |
| TGCCGTAGAGCCTCAATAAA+CGG | + | chr1_4:60205000-60205019 | None:intergenic | 45.0% | |
| TGCTGTCATACCCACTTGAA+AGG | + | chr1_4:60205028-60205047 | None:intergenic | 45.0% | |
| CTTTCCTCGACAACAGTCAA+AGG | + | chr1_4:60205736-60205755 | None:intergenic | 45.0% | |
| TGGATGAGACAGAAGTTGTC+AGG | + | chr1_4:60206271-60206290 | None:intergenic | 45.0% | |
| ACACTGGTATCAGGCTAACA+TGG | + | chr1_4:60206291-60206310 | None:intergenic | 45.0% | |
| ! | TGTTAGCCTGATACCAGTGT+TGG | - | chr1_4:60206291-60206310 | Msa0174530:intron | 45.0% |
| ! | GTTAGCCTGATACCAGTGTT+GGG | - | chr1_4:60206292-60206311 | Msa0174530:intron | 45.0% |
| ! | ATACCAGTGTTGGGTGTAGT+GGG | - | chr1_4:60206301-60206320 | Msa0174530:intron | 45.0% |
| !!! | GTTGTGTCGGCTTTGTTTTC+TGG | + | chr1_4:60206412-60206431 | None:intergenic | 45.0% |
| ! | TGTCAGGGAACTAAGAGCAT+TGG | - | chr1_4:60206436-60206455 | Msa0174530:intron | 45.0% |
| !! | GTCAGGGAACTAAGAGCATT+GGG | - | chr1_4:60206437-60206456 | Msa0174530:intron | 45.0% |
| !! | GAGCGACTTGCTAAAAGATG+AGG | + | chr1_4:60206470-60206489 | None:intergenic | 45.0% |
| AAATGCATCTAGGCACCAAC+TGG | + | chr1_4:60206513-60206532 | None:intergenic | 45.0% | |
| GAGCCTGAATTTCGTAACTG+TGG | + | chr1_4:60206673-60206692 | None:intergenic | 45.0% | |
| GCTGCTGTAAAATTGAGTGG+TGG | + | chr1_4:60207756-60207775 | None:intergenic | 45.0% | |
| !! | TTTGCGGCAATGGACTGATA+TGG | - | chr1_4:60208436-60208455 | Msa0174530:intron | 45.0% |
| ! | GCCATGGTGGGAAAATATGT+TGG | - | chr1_4:60208586-60208605 | Msa0174530:intron | 45.0% |
| GTAGGGCCTTTAAACAGATG+AGG | + | chr1_4:60209048-60209067 | None:intergenic | 45.0% | |
| TGCAACACAAGCATGCAGTA+GGG | + | chr1_4:60209065-60209084 | None:intergenic | 45.0% | |
| GCTGCAATCCAGTCAATTGA+TGG | + | chr1_4:60209100-60209119 | None:intergenic | 45.0% | |
| TTCTCATTATGCAGGCAGTC+AGG | - | chr1_4:60209193-60209212 | Msa0174530:intron | 45.0% | |
| AAAACCGTCTAGCACATAGC+GGG | + | chr1_4:60209385-60209404 | None:intergenic | 45.0% | |
| ! | GCTATGTGCTAGACGGTTTT+TGG | - | chr1_4:60209385-60209404 | Msa0174530:intron | 45.0% |
| ACACACACCCTTTACGTTAC+TGG | - | chr1_4:60209591-60209610 | Msa0174530:intron | 45.0% | |
| TCATGTGGAGAGATCCACAT+TGG | + | chr1_4:60209751-60209770 | None:intergenic | 45.0% | |
| ! | TCCTTACTTGGGGATTTGCT+TGG | - | chr1_4:60209940-60209959 | Msa0174530:intron | 45.0% |
| ! | CCTTACTTGGGGATTTGCTT+GGG | - | chr1_4:60209941-60209960 | Msa0174530:intron | 45.0% |
| GAAACAAGTATGCGTACCTC+TGG | + | chr1_4:60210156-60210175 | None:intergenic | 45.0% | |
| AATGATTAGGGAAACTGGGG+AGG | + | chr1_4:60210183-60210202 | None:intergenic | 45.0% | |
| GATGCCTGCTAGTCATAAAC+AGG | - | chr1_4:60210214-60210233 | Msa0174530:intron | 45.0% | |
| GAACCCTGTTTATGACTAGC+AGG | + | chr1_4:60210221-60210240 | None:intergenic | 45.0% | |
| !! | ATGGGAAGTACCATGAGACT+TGG | - | chr1_4:60210251-60210270 | Msa0174530:intron | 45.0% |
| TCTTCGAGATCCAAGTCTCA+TGG | + | chr1_4:60210264-60210283 | None:intergenic | 45.0% | |
| GTCATTCAGAACAACCAGAC+AGG | + | chr1_4:60210499-60210518 | None:intergenic | 45.0% | |
| AGATAAGGGGTTTCAAGGGA+AGG | - | chr1_4:60210928-60210947 | Msa0174530:intron | 45.0% | |
| GATAAGGGGTTTCAAGGGAA+GGG | - | chr1_4:60210929-60210948 | Msa0174530:CDS | 45.0% | |
| GGTTTCAAGGGAAGGGAAAT+GGG | - | chr1_4:60210936-60210955 | Msa0174530:CDS | 45.0% | |
| GAAGGGAAATGGGAAAGGTT+TGG | - | chr1_4:60210946-60210965 | Msa0174530:CDS | 45.0% | |
| ! | ACCTTTTGCTAGGAAGGGAA+GGG | + | chr1_4:60211009-60211028 | None:intergenic | 45.0% |
| ATACTCCGAATTGCCATACC+TGG | + | chr1_4:60211556-60211575 | None:intergenic | 45.0% | |
| GTATGGCAATTCGGAGTATG+TGG | - | chr1_4:60211557-60211576 | Msa0174530:intron | 45.0% | |
| !! | CTGGGCTAAAATTTGTTGGC+AGG | - | chr1_4:60211729-60211748 | Msa0174530:intron | 45.0% |
| TTTGTTGGCAGGGATGAAAG+CGG | - | chr1_4:60211740-60211759 | Msa0174530:intron | 45.0% | |
| CATGTCTAATTGAAACCGCC+AGG | + | chr1_4:60211834-60211853 | None:intergenic | 45.0% | |
| CTGGCGGTTTCAATTAGACA+TGG | - | chr1_4:60211832-60211851 | Msa0174530:intron | 45.0% | |
| !! | CAACAACAAGAGTGCTGTGA+AGG | + | chr1_4:60212188-60212207 | None:intergenic | 45.0% |
| TGATGCTGCACCTATACTGT+AGG | - | chr1_4:60212393-60212412 | Msa0174530:CDS | 45.0% | |
| AGGTCTCATATTGGCAGCAA+CGG | - | chr1_4:60212413-60212432 | Msa0174530:CDS | 45.0% | |
| GAACTAGGAACTGAAGTAGG+AGG | - | chr1_4:60212583-60212602 | Msa0174530:intron | 45.0% | |
| AGGAACTGAAGTAGGAGGAA+TGG | - | chr1_4:60212588-60212607 | Msa0174530:intron | 45.0% | |
| GGAACTGAAGTAGGAGGAAT+GGG | - | chr1_4:60212589-60212608 | Msa0174530:intron | 45.0% | |
| ! | ATCCAACCTAGAGAAGCATG+GGG | + | chr1_4:60212644-60212663 | None:intergenic | 45.0% |
| ! | GATCCAACCTAGAGAAGCAT+GGG | + | chr1_4:60212645-60212664 | None:intergenic | 45.0% |
| AGATCCAACCTAGAGAAGCA+TGG | + | chr1_4:60212646-60212665 | None:intergenic | 45.0% | |
| ACCATTAACCTGACACTCAC+AGG | - | chr1_4:60213122-60213141 | Msa0174530:intron | 45.0% | |
| !!! | AAAATAATTTCTAAAAAAAT+AGG | + | chr1_4:60205561-60205580 | None:intergenic | 5.0% |
| !!! | TATATTTTTCAATAAAAATA+TGG | + | chr1_4:60208350-60208369 | None:intergenic | 5.0% |
| !! | TTGAAAAATATATTAATAAT+TGG | - | chr1_4:60208358-60208377 | Msa0174530:intron | 5.0% |
| !!! | TTTCTAAAAAAATTAAAAAA+AGG | - | chr1_4:60208966-60208985 | Msa0174530:intron | 5.0% |
| !!! | TTCTAAAAAAATTAAAAAAA+GGG | - | chr1_4:60208967-60208986 | Msa0174530:intron | 5.0% |
| GTGTTTATATCCGAGCGGGA+AGG | + | chr1_4:60203931-60203950 | None:intergenic | 50.0% | |
| AAGTACGTTCTCATCTCCGG+CGG | - | chr1_4:60204000-60204019 | Msa0174530:three_prime_UTR | 50.0% | |
| !! | CGATTTTGATGGAGGTGACG+CGG | + | chr1_4:60204095-60204114 | None:intergenic | 50.0% |
| CGCGTCACCTCCATCAAAAT+CGG | - | chr1_4:60204093-60204112 | Msa0174530:three_prime_UTR | 50.0% | |
| !! | TGTTCTTGATGATGGCGGAG+AGG | - | chr1_4:60204260-60204279 | Msa0174530:intron | 50.0% |
| GAGCGCAAGGGAGATTATCT+CGG | - | chr1_4:60204602-60204621 | Msa0174530:intron | 50.0% | |
| !! | ATTGAGCTTGGAGGCACTGT+GGG | - | chr1_4:60204854-60204873 | Msa0174530:intron | 50.0% |
| CCTCGACAACAGTCAAAGGA+TGG | + | chr1_4:60205732-60205751 | None:intergenic | 50.0% | |
| CCATCCTTTGACTGTTGTCG+AGG | - | chr1_4:60205729-60205748 | Msa0174530:intron | 50.0% | |
| AAGGTTGCGGGACATTCACT+TGG | - | chr1_4:60205781-60205800 | Msa0174530:intron | 50.0% | |
| CTACACCCAACACTGGTATC+AGG | + | chr1_4:60206300-60206319 | None:intergenic | 50.0% | |
| ! | GATACCAGTGTTGGGTGTAG+TGG | - | chr1_4:60206300-60206319 | Msa0174530:intron | 50.0% |
| ! | TACCAGTGTTGGGTGTAGTG+GGG | - | chr1_4:60206302-60206321 | Msa0174530:intron | 50.0% |
| TCCCTGACACTGTGTTGTGT+CGG | + | chr1_4:60206425-60206444 | None:intergenic | 50.0% | |
| TTTAGCAAGTCGCTCTGCTG+AGG | - | chr1_4:60206475-60206494 | Msa0174530:intron | 50.0% | |
| TGTGATATTGGGCCTTACCG+AGG | - | chr1_4:60207045-60207064 | Msa0174530:intron | 50.0% | |
| TGGGCCTTACCGAGGAAATT+TGG | - | chr1_4:60207053-60207072 | Msa0174530:intron | 50.0% | |
| ATTCAATGTGCAGCCTCTGC+TGG | - | chr1_4:60207431-60207450 | Msa0174530:intron | 50.0% | |
| TCCTTGGTACTTTCCAGCAG+AGG | + | chr1_4:60207447-60207466 | None:intergenic | 50.0% | |
| AAGTTGACAACGGGATGCAG+GGG | + | chr1_4:60208045-60208064 | None:intergenic | 50.0% | |
| ! | CAAGTTGACAACGGGATGCA+GGG | + | chr1_4:60208046-60208065 | None:intergenic | 50.0% |
| !! | TCAAGTTGACAACGGGATGC+AGG | + | chr1_4:60208047-60208066 | None:intergenic | 50.0% |
| CATACTTGGGAAGGTTCTGC+TGG | - | chr1_4:60208304-60208323 | Msa0174530:intron | 50.0% | |
| ! | GCAAATCAGGAGGTGTAGCA+CGG | + | chr1_4:60208421-60208440 | None:intergenic | 50.0% |
| ! | GTGCTACACCTCCTGATTTG+CGG | - | chr1_4:60208420-60208439 | Msa0174530:intron | 50.0% |
| TCAGTCCATTGCCGCAAATC+AGG | + | chr1_4:60208434-60208453 | None:intergenic | 50.0% | |
| ACAGGTTAGGATTGCCATGG+TGG | - | chr1_4:60208573-60208592 | Msa0174530:intron | 50.0% | |
| CAGGTTAGGATTGCCATGGT+GGG | - | chr1_4:60208574-60208593 | Msa0174530:intron | 50.0% | |
| GTGCAACACAAGCATGCAGT+AGG | + | chr1_4:60209066-60209085 | None:intergenic | 50.0% | |
| CTTCAGAGTCTTCCATGCTG+CGG | + | chr1_4:60209271-60209290 | None:intergenic | 50.0% | |
| TGATCCCGCTATGTGCTAGA+CGG | - | chr1_4:60209378-60209397 | Msa0174530:intron | 50.0% | |
| GTCTTGGTTCCAGGAGGATT+TGG | - | chr1_4:60209860-60209879 | Msa0174530:intron | 50.0% | |
| TTTGGAGATCGTGGTGTGAG+AGG | - | chr1_4:60209878-60209897 | Msa0174530:intron | 50.0% | |
| CCCAAGCAAATCCCCAAGTA+AGG | + | chr1_4:60209944-60209963 | None:intergenic | 50.0% | |
| ATTAGGGAAACTGGGGAGGA+GGG | + | chr1_4:60210179-60210198 | None:intergenic | 50.0% | |
| GACTAGCAGGCATCACAACA+AGG | + | chr1_4:60210208-60210227 | None:intergenic | 50.0% | |
| !! | ACAGGGTTCTAGGACTCACA+TGG | - | chr1_4:60210232-60210251 | Msa0174530:intron | 50.0% |
| !! | CAGGGTTCTAGGACTCACAT+GGG | - | chr1_4:60210233-60210252 | Msa0174530:intron | 50.0% |
| ! | TTTCTTGTTCTGGGCCTGTC+TGG | - | chr1_4:60210482-60210501 | Msa0174530:intron | 50.0% |
| ATGTCTGGTCGTTGACCATC+AGG | - | chr1_4:60210533-60210552 | Msa0174530:intron | 50.0% | |
| TGTCTGGTCGTTGACCATCA+GGG | - | chr1_4:60210534-60210553 | Msa0174530:intron | 50.0% | |
| !!! | GGCACTCGTTTTGAAACGGA+GGG | + | chr1_4:60210613-60210632 | None:intergenic | 50.0% |
| GGGTTTCAAGGGAAGGGAAA+TGG | - | chr1_4:60210935-60210954 | Msa0174530:CDS | 50.0% | |
| CAAGGGAAGGGAAATGGGAA+AGG | - | chr1_4:60210941-60210960 | Msa0174530:CDS | 50.0% | |
| GGGATGTAGGTTTGGACAGT+CGG | + | chr1_4:60210985-60211004 | None:intergenic | 50.0% | |
| ! | TTTTGCTAGGAAGGGAAGGG+GGG | + | chr1_4:60211006-60211025 | None:intergenic | 50.0% |
| ! | CTTTTGCTAGGAAGGGAAGG+GGG | + | chr1_4:60211007-60211026 | None:intergenic | 50.0% |
| ! | CCTTTTGCTAGGAAGGGAAG+GGG | + | chr1_4:60211008-60211027 | None:intergenic | 50.0% |
| ! | CACCTTTTGCTAGGAAGGGA+AGG | + | chr1_4:60211010-60211029 | None:intergenic | 50.0% |
| ACGGCATCGTCATAGATACG+AGG | - | chr1_4:60211584-60211603 | Msa0174530:intron | 50.0% | |
| GGATGAAAGCGGAAGACGAA+TGG | - | chr1_4:60211751-60211770 | Msa0174530:intron | 50.0% | |
| TGAAAGCGGAAGACGAATGG+AGG | - | chr1_4:60211754-60211773 | Msa0174530:intron | 50.0% | |
| CCAGGCCGAGATTTGAATTC+GGG | + | chr1_4:60212024-60212043 | None:intergenic | 50.0% | |
| CCCAGGCCGAGATTTGAATT+CGG | + | chr1_4:60212025-60212044 | None:intergenic | 50.0% | |
| CCGAATTCAAATCTCGGCCT+GGG | - | chr1_4:60212022-60212041 | Msa0174530:intron | 50.0% | |
| AACAAAGCAGATGGTCTCCC+AGG | + | chr1_4:60212042-60212061 | None:intergenic | 50.0% | |
| CAGATGGTGTAAACGGCTCT+TGG | + | chr1_4:60212130-60212149 | None:intergenic | 50.0% | |
| GGTCTCATATTGGCAGCAAC+GGG | - | chr1_4:60212414-60212433 | Msa0174530:CDS | 50.0% | |
| GTCTCATATTGGCAGCAACG+GGG | - | chr1_4:60212415-60212434 | Msa0174530:CDS | 50.0% | |
| GAGGAATGGGAATCCTGAAG+TGG | - | chr1_4:60212602-60212621 | Msa0174530:intron | 50.0% | |
| TACCCCATGCTTCTCTAGGT+TGG | - | chr1_4:60212639-60212658 | Msa0174530:CDS | 50.0% | |
| GCCTGTGAGTGTCAGGTTAA+TGG | + | chr1_4:60213126-60213145 | None:intergenic | 50.0% | |
| ! | AAAAGGAGCACGCACGTTTG+GGG | + | chr1_4:60213202-60213221 | None:intergenic | 50.0% |
| ! | GAAAAGGAGCACGCACGTTT+GGG | + | chr1_4:60213203-60213222 | None:intergenic | 50.0% |
| ! | AGAAAAGGAGCACGCACGTT+TGG | + | chr1_4:60213204-60213223 | None:intergenic | 50.0% |
| ! | TTTTGATGGAGGTGACGCGG+AGG | + | chr1_4:60204092-60204111 | None:intergenic | 55.0% |
| ! | TGTGCTTGAGAAGGAGCGCA+AGG | - | chr1_4:60204589-60204608 | Msa0174530:intron | 55.0% |
| ! | GTGCTTGAGAAGGAGCGCAA+GGG | - | chr1_4:60204590-60204609 | Msa0174530:intron | 55.0% |
| TGAGTCGGTTGCTGTGATCC+CGG | - | chr1_4:60204796-60204815 | Msa0174530:CDS | 55.0% | |
| GTTGCTGTGATCCCGGTTGA+TGG | - | chr1_4:60204803-60204822 | Msa0174530:CDS | 55.0% | |
| !! | GATTGAGCTTGGAGGCACTG+TGG | - | chr1_4:60204853-60204872 | Msa0174530:intron | 55.0% |
| GAAGTTGTCAGGCCCTGAGA+AGG | + | chr1_4:60206260-60206279 | None:intergenic | 55.0% | |
| ! | ACCAGTGTTGGGTGTAGTGG+GGG | - | chr1_4:60206303-60206322 | Msa0174530:intron | 55.0% |
| AGCCGACACAACACAGTGTC+AGG | - | chr1_4:60206420-60206439 | Msa0174530:intron | 55.0% | |
| GCCGACACAACACAGTGTCA+GGG | - | chr1_4:60206421-60206440 | Msa0174530:intron | 55.0% | |
| GCACTCAGCTTCAACCCCTT+TGG | + | chr1_4:60207118-60207137 | None:intergenic | 55.0% | |
| !! | GCCTCTGCTGGAAAGTACCA+AGG | - | chr1_4:60207443-60207462 | Msa0174530:intron | 55.0% |
| GAGGTGTAGCACGGCTGAAA+AGG | + | chr1_4:60208412-60208431 | None:intergenic | 55.0% | |
| ! | CACCTCCTGATTTGCGGCAA+TGG | - | chr1_4:60208426-60208445 | Msa0174530:intron | 55.0% |
| GTCCATTGCCGCAAATCAGG+AGG | + | chr1_4:60208431-60208450 | None:intergenic | 55.0% | |
| CGCAGCATGGAAGACTCTGA+AGG | - | chr1_4:60209269-60209288 | Msa0174530:intron | 55.0% | |
| GCAGAGTGCAGCTTGTGTCT+TGG | - | chr1_4:60209844-60209863 | Msa0174530:intron | 55.0% | |
| GCAGCTTGTGTCTTGGTTCC+AGG | - | chr1_4:60209851-60209870 | Msa0174530:intron | 55.0% | |
| GCTTGTGTCTTGGTTCCAGG+AGG | - | chr1_4:60209854-60209873 | Msa0174530:intron | 55.0% | |
| CCACGATCTCCAAATCCTCC+TGG | + | chr1_4:60209872-60209891 | None:intergenic | 55.0% | |
| CCAGGAGGATTTGGAGATCG+TGG | - | chr1_4:60209869-60209888 | Msa0174530:intron | 55.0% | |
| TTAGGGAAACTGGGGAGGAG+GGG | + | chr1_4:60210178-60210197 | None:intergenic | 55.0% | |
| GATTAGGGAAACTGGGGAGG+AGG | + | chr1_4:60210180-60210199 | None:intergenic | 55.0% | |
| !!! | CGGCACTCGTTTTGAAACGG+AGG | + | chr1_4:60210614-60210633 | None:intergenic | 55.0% |
| TTTGCTAGGAAGGGAAGGGG+GGG | + | chr1_4:60211005-60211024 | None:intergenic | 55.0% | |
| CCCCTTCCCTTCCTAGCAAA+AGG | - | chr1_4:60211005-60211024 | Msa0174530:intron | 55.0% | |
| ATGGAGGACACATCACACGC+TGG | + | chr1_4:60211401-60211420 | None:intergenic | 55.0% | |
| CCCGAATTCAAATCTCGGCC+TGG | - | chr1_4:60212021-60212040 | Msa0174530:intron | 55.0% | |
| ATTGGCAGCAACGGGGAAGT+TGG | - | chr1_4:60212422-60212441 | Msa0174530:CDS | 55.0% | |
| ATTGGGAGCAAGGGAATGGG+AGG | - | chr1_4:60212557-60212576 | Msa0174530:intron | 55.0% | |
| GGGAATGGGAGGTAGGAACT+AGG | - | chr1_4:60212568-60212587 | Msa0174530:intron | 55.0% | |
| CTGCACGCATACTCCACTTC+AGG | + | chr1_4:60212618-60212637 | None:intergenic | 55.0% | |
| CAGCTACCCCATGCTTCTCT+AGG | - | chr1_4:60212635-60212654 | Msa0174530:CDS | 55.0% | |
| GGGGCATGGTGAACTGAACA+AGG | + | chr1_4:60213183-60213202 | None:intergenic | 55.0% | |
| ATCTCCGGCGGAGTCGTTAG+CGG | - | chr1_4:60204012-60204031 | Msa0174530:three_prime_UTR | 60.0% | |
| TCCCCCACTACACCCAACAC+TGG | + | chr1_4:60206307-60206326 | None:intergenic | 60.0% | |
| AACGGGATGCAGGGGACAGT+TGG | + | chr1_4:60208037-60208056 | None:intergenic | 60.0% | |
| CATGCTGCGGCATGTGCTTC+TGG | + | chr1_4:60209258-60209277 | None:intergenic | 60.0% | |
| ! | CAGAAGCACATGCCGCAGCA+TGG | - | chr1_4:60209256-60209275 | Msa0174530:intron | 60.0% |
| GGAAGGGGGGGATGTAGGTT+TGG | + | chr1_4:60210993-60211012 | None:intergenic | 60.0% | |
| GGAGCAAGGGAATGGGAGGT+AGG | - | chr1_4:60212561-60212580 | Msa0174530:intron | 60.0% | |
| GTCGTTAGCGGCCTCGGCAA+AGG | - | chr1_4:60204024-60204043 | Msa0174530:three_prime_UTR | 65.0% | |
| GGCGTCGTCCTCAAAGCCTG+CGG | - | chr1_4:60204066-60204085 | Msa0174530:three_prime_UTR | 65.0% | |
| GGAAGGGAAGGGGGGGATGT+AGG | + | chr1_4:60210998-60211017 | None:intergenic | 65.0% | |
| ! | GAGCACGCACGTTTGGGGCA+TGG | + | chr1_4:60213197-60213216 | None:intergenic | 65.0% |
| GAGGCCGCTAACGACTCCGC+CGG | + | chr1_4:60204019-60204038 | None:intergenic | 70.0% | |
| GGCGGAGTCGTTAGCGGCCT+CGG | - | chr1_4:60204018-60204037 | Msa0174530:three_prime_UTR | 70.0% | |
| TGGCGGTGACGCCTTTGCCG+AGG | + | chr1_4:60204038-60204057 | None:intergenic | 70.0% | |
| GGCGTCACCGCCAGCAGCAT+CGG | - | chr1_4:60204045-60204064 | Msa0174530:three_prime_UTR | 70.0% | |
| GACGACGCCGATGCTGCTGG+CGG | + | chr1_4:60204055-60204074 | None:intergenic | 70.0% | |
| GAGGACGACGCCGATGCTGC+TGG | + | chr1_4:60204058-60204077 | None:intergenic | 70.0% | |
| CGCGGAGGCCGCAGGCTTTG+AGG | + | chr1_4:60204077-60204096 | None:intergenic | 75.0% | |
| ! | GGAGGTGACGCGGAGGCCGC+AGG | + | chr1_4:60204085-60204104 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 60203845 | 60213414 | 60203845 | ID=Msa0174530;Name=Msa0174530 |
| chr1_4 | mRNA | 60203845 | 60213414 | 60203845 | ID=Msa0174530-mRNA-1;Parent=Msa0174530;Name=Msa0174530-mRNA-1;_AED=0.17;_eAED=0.17;_QI=152|1|1|1|0.95|0.91|23|447|562 |
| chr1_4 | exon | 60203845 | 60204244 | 60203845 | ID=Msa0174530-mRNA-1:exon:19077;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60204730 | 60204844 | 60204730 | ID=Msa0174530-mRNA-1:exon:19076;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60205193 | 60205286 | 60205193 | ID=Msa0174530-mRNA-1:exon:19075;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60205484 | 60205564 | 60205484 | ID=Msa0174530-mRNA-1:exon:19074;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60205654 | 60205702 | 60205654 | ID=Msa0174530-mRNA-1:exon:19073;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60206938 | 60207023 | 60206938 | ID=Msa0174530-mRNA-1:exon:19072;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60207101 | 60207178 | 60207101 | ID=Msa0174530-mRNA-1:exon:19071;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60207262 | 60207411 | 60207262 | ID=Msa0174530-mRNA-1:exon:19070;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60207969 | 60208007 | 60207969 | ID=Msa0174530-mRNA-1:exon:19069;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60208109 | 60208198 | 60208109 | ID=Msa0174530-mRNA-1:exon:19068;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60208620 | 60208682 | 60208620 | ID=Msa0174530-mRNA-1:exon:19067;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60208772 | 60208841 | 60208772 | ID=Msa0174530-mRNA-1:exon:19066;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60209471 | 60209517 | 60209471 | ID=Msa0174530-mRNA-1:exon:19065;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60209611 | 60209673 | 60209611 | ID=Msa0174530-mRNA-1:exon:19064;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60209765 | 60209815 | 60209765 | ID=Msa0174530-mRNA-1:exon:19063;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60210763 | 60210846 | 60210763 | ID=Msa0174530-mRNA-1:exon:19062;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60210929 | 60210993 | 60210929 | ID=Msa0174530-mRNA-1:exon:19061;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60212223 | 60212279 | 60212223 | ID=Msa0174530-mRNA-1:exon:19060;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60212384 | 60212501 | 60212384 | ID=Msa0174530-mRNA-1:exon:19059;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60212622 | 60212672 | 60212622 | ID=Msa0174530-mRNA-1:exon:19058;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60212768 | 60212854 | 60212768 | ID=Msa0174530-mRNA-1:exon:19057;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60212978 | 60213057 | 60212978 | ID=Msa0174530-mRNA-1:exon:19056;Parent=Msa0174530-mRNA-1 |
| chr1_4 | exon | 60213145 | 60213414 | 60213145 | ID=Msa0174530-mRNA-1:exon:19055;Parent=Msa0174530-mRNA-1 |
| chr1_4 | five_prime_UTR | 60213263 | 60213414 | 60213263 | ID=Msa0174530-mRNA-1:five_prime_utr;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60213145 | 60213262 | 60213145 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60212978 | 60213057 | 60212978 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60212768 | 60212854 | 60212768 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60212622 | 60212672 | 60212622 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60212384 | 60212501 | 60212384 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60212223 | 60212279 | 60212223 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60210929 | 60210993 | 60210929 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60210763 | 60210846 | 60210763 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60209765 | 60209815 | 60209765 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60209611 | 60209673 | 60209611 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60209471 | 60209517 | 60209471 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60208772 | 60208841 | 60208772 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60208620 | 60208682 | 60208620 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60208109 | 60208198 | 60208109 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60207969 | 60208007 | 60207969 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60207262 | 60207411 | 60207262 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60207101 | 60207178 | 60207101 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60206938 | 60207023 | 60206938 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60205654 | 60205702 | 60205654 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60205484 | 60205564 | 60205484 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60205193 | 60205286 | 60205193 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | CDS | 60204777 | 60204844 | 60204777 | ID=Msa0174530-mRNA-1:cds;Parent=Msa0174530-mRNA-1 |
| chr1_4 | three_prime_UTR | 60204730 | 60204776 | 60204730 | ID=Msa0174530-mRNA-1:three_prime_utr;Parent=Msa0174530-mRNA-1 |
| chr1_4 | three_prime_UTR | 60203845 | 60204244 | 60203845 | ID=Msa0174530-mRNA-1:three_prime_utr;Parent=Msa0174530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
