Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128510 | XP_024639356.1 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128510 | sp|Q54V77|PYRG_DICDI | 60.808 | 569 | 203 | 6 | 1 | 551 | 1 | 567 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128510 | G7IDT8 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030620 | Msa0128510 | 0.936902 | 8.240404e-98 | -8.615850e-47 |
| Msa0082150 | Msa0128510 | 0.852928 | 3.344907e-61 | -8.615850e-47 |
| Msa0128510 | Msa0138720 | 0.926895 | 2.498007e-91 | -8.615850e-47 |
| Msa0128510 | Msa0174530 | 0.985492 | 9.785038e-164 | -8.615850e-47 |
| Msa0128510 | Msa1111630 | 0.815037 | 1.134753e-51 | -8.615850e-47 |
| Msa0128510 | Msa1167170 | 0.815451 | 9.185470e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128510 | MtrunA17_Chr1g0195001 | 99.644 | 562 | 2 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1154 |
| Msa0128510 | MtrunA17_Chr8g0356221 | 71.404 | 570 | 155 | 2 | 1 | 562 | 1 | 570 | 0.0 | 855 |
| Msa0128510 | MtrunA17_Chr2g0309341 | 72.894 | 546 | 148 | 0 | 1 | 546 | 1 | 546 | 0.0 | 841 |
| Msa0128510 | MtrunA17_Chr8g0369081 | 71.196 | 552 | 159 | 0 | 1 | 552 | 1 | 552 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128510 | AT4G02120.1 | 83.813 | 556 | 90 | 0 | 1 | 556 | 1 | 556 | 0.0 | 981 |
| Msa0128510 | AT4G02120.2 | 80.623 | 578 | 90 | 1 | 1 | 556 | 1 | 578 | 0.0 | 971 |
| Msa0128510 | AT4G02120.5 | 79.137 | 556 | 77 | 1 | 1 | 556 | 1 | 517 | 0.0 | 905 |
| Msa0128510 | AT4G02120.3 | 86.570 | 484 | 65 | 0 | 1 | 484 | 1 | 484 | 0.0 | 875 |
| Msa0128510 | AT3G12670.1 | 73.732 | 552 | 144 | 1 | 1 | 552 | 1 | 551 | 0.0 | 846 |
| Msa0128510 | AT4G02120.4 | 86.910 | 466 | 61 | 0 | 1 | 466 | 1 | 466 | 0.0 | 843 |
| Msa0128510 | AT1G30820.1 | 70.780 | 551 | 161 | 0 | 1 | 551 | 1 | 551 | 0.0 | 833 |
| Msa0128510 | AT4G20320.2 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0128510 | AT4G20320.5 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0128510 | AT4G20320.6 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0128510 | AT4G20320.4 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0128510 | AT4G20320.1 | 70.054 | 551 | 165 | 0 | 1 | 551 | 1 | 551 | 0.0 | 805 |
| Msa0128510 | AT2G34890.1 | 65.480 | 562 | 192 | 1 | 1 | 560 | 1 | 562 | 0.0 | 785 |
| Msa0128510 | AT4G20320.3 | 68.526 | 502 | 158 | 0 | 50 | 551 | 1 | 502 | 0.0 | 738 |
Find 175 sgRNAs with CRISPR-Local
Find 600 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATAATATTATAATTA+TGG | 0.126755 | 1_3:-58303442 | Msa0128510:three_prime_UTR |
| GAGCGGGAAGGTTGATATTT+TGG | 0.186108 | 1_3:+58312907 | None:intergenic |
| TTCATGATGTACCAAATATT+TGG | 0.205073 | 1_3:-58309219 | Msa0128510:CDS |
| ATTGTTCTCTCTGGCATATT+TGG | 0.242741 | 1_3:+58306909 | None:intergenic |
| TTTATAGGTTGATTTGGATT+TGG | 0.257444 | 1_3:-58312425 | Msa0128510:intron |
| TTATAGGTTGATTTGGATTT+GGG | 0.261073 | 1_3:-58312424 | Msa0128510:intron |
| GCAGCTTGTGTCTTGGTTCC+AGG | 0.262807 | 1_3:-58306973 | Msa0128510:CDS |
| CATGCTGCGGCATGTGCTTC+TGG | 0.277150 | 1_3:+58307569 | None:intergenic |
| GTCTTGGTTCCAGGAGGATT+TGG | 0.288037 | 1_3:-58306964 | Msa0128510:CDS |
| AGGGGAATATGCCAAATATT+TGG | 0.292011 | 1_3:+58309208 | None:intergenic |
| ATGAAAATTACAACAGGATT+TGG | 0.292322 | 1_3:+58306694 | None:intergenic |
| TTACAACAGGATTTGGTGTT+TGG | 0.292770 | 1_3:+58306701 | None:intergenic |
| AATTGCACGCCTACATAATA+TGG | 0.299023 | 1_3:+58304829 | None:intergenic |
| GAAAAGGAGCACGCACGTTT+GGG | 0.306880 | 1_3:+58303623 | None:intergenic |
| GAAGATAATATTATAATTAT+GGG | 0.320733 | 1_3:-58303441 | Msa0128510:three_prime_UTR |
| CTAGTCATAAACAGGGTTCT+AGG | 0.329918 | 1_3:-58306601 | Msa0128510:intron |
| AGAGACTCACTCTAAGTAAC+AGG | 0.332129 | 1_3:+58309188 | None:intergenic |
| GCCTGTGAGTGTCAGGTTAA+TGG | 0.343980 | 1_3:+58303700 | None:intergenic |
| AGAAAAGGAGCACGCACGTT+TGG | 0.345282 | 1_3:+58303622 | None:intergenic |
| GGGTCTTCATTTCCATCAAC+CGG | 0.349986 | 1_3:+58312008 | None:intergenic |
| GGCGGAGTCGTTAGCGGCCT+CGG | 0.350600 | 1_3:-58312805 | Msa0128510:CDS |
| AGCCGACACAACACAGTGTC+AGG | 0.360915 | 1_3:-58310404 | Msa0128510:CDS |
| CCTTACTTGGGGATTTGCTT+GGG | 0.363800 | 1_3:-58306883 | Msa0128510:CDS |
| CCAGGCCGAGATTTGAATTC+GGG | 0.365733 | 1_3:+58304802 | None:intergenic |
| TACAACAGGATTTGGTGTTT+GGG | 0.372108 | 1_3:+58306702 | None:intergenic |
| TCCTTACTTGGGGATTTGCT+TGG | 0.377880 | 1_3:-58306884 | Msa0128510:CDS |
| CCCAGGCCGAGATTTGAATT+CGG | 0.381611 | 1_3:+58304801 | None:intergenic |
| CTACACCCAACACTGGTATC+AGG | 0.389842 | 1_3:+58310527 | None:intergenic |
| TACTACTGGGAAAATATATC+AGG | 0.394580 | 1_3:-58312353 | Msa0128510:intron |
| ATTGAAACTTTAGAAGAAGC+TGG | 0.397254 | 1_3:-58305113 | Msa0128510:CDS |
| CGCGGAGGCCGCAGGCTTTG+AGG | 0.401516 | 1_3:+58312749 | None:intergenic |
| GATCTACGATTCTTTACTAT+AGG | 0.408278 | 1_3:-58304342 | Msa0128510:three_prime_UTR |
| ATTCAATGTGCAGCCTCTGC+TGG | 0.411306 | 1_3:-58309393 | Msa0128510:intron |
| AGAGAACAATGTTCCTTACT+TGG | 0.411823 | 1_3:-58306896 | Msa0128510:CDS |
| TCACCGATGCAATCAGAAAC+TGG | 0.416127 | 1_3:-58312052 | Msa0128510:CDS |
| TCAGTCCATTGCCGCAAATC+AGG | 0.416330 | 1_3:+58308393 | None:intergenic |
| TTTGCGGCAATGGACTGATA+TGG | 0.421515 | 1_3:-58308388 | Msa0128510:CDS |
| TTTATAAGCCTGTGAGTGTC+AGG | 0.421744 | 1_3:+58303693 | None:intergenic |
| GGTCTCATATTGGCAGCAAC+GGG | 0.423607 | 1_3:-58304409 | Msa0128510:CDS |
| AAGGATAATAATATTACTAC+TGG | 0.423934 | 1_3:-58312367 | Msa0128510:CDS |
| GCTGCAATCCAGTCAATTGA+TGG | 0.432899 | 1_3:+58307727 | None:intergenic |
| CGCGTCACCTCCATCAAAAT+CGG | 0.434250 | 1_3:-58312730 | Msa0128510:intron |
| TTCATATTTATCTGTTGTAA+AGG | 0.435122 | 1_3:-58308206 | Msa0128510:intron |
| CACCTCCTGATTTGCGGCAA+TGG | 0.440971 | 1_3:-58308398 | Msa0128510:CDS |
| CTGGGCTAAAATTTGTTGGC+AGG | 0.443903 | 1_3:-58305094 | Msa0128510:CDS |
| TGCCGTAGAGCCTCAATAAA+CGG | 0.445911 | 1_3:+58311826 | None:intergenic |
| TGACATTGTTCAGGTAAATC+CGG | 0.446706 | 1_3:-58305141 | Msa0128510:intron |
| GTTGCTGTGATCCCGGTTGA+TGG | 0.447710 | 1_3:-58312020 | Msa0128510:CDS |
| GATGTTTGTGTGATTGAGCT+TGG | 0.449727 | 1_3:-58311981 | Msa0128510:CDS |
| GAGGACGACGCCGATGCTGC+TGG | 0.450311 | 1_3:+58312768 | None:intergenic |
| GAGAACAATGTTCCTTACTT+GGG | 0.452256 | 1_3:-58306895 | Msa0128510:CDS |
| ATTGGCAGCAACGGGGAAGT+TGG | 0.452434 | 1_3:-58304401 | Msa0128510:CDS |
| ATTGTGCACTGTCATCTTCA+AGG | 0.452441 | 1_3:+58307698 | None:intergenic |
| AATTACCAGGTATGGCAATT+CGG | 0.452917 | 1_3:-58305275 | Msa0128510:intron |
| ATGAAGTACGTTCTCATCTC+CGG | 0.453080 | 1_3:-58312826 | Msa0128510:CDS |
| GCAGAGTGCAGCTTGTGTCT+TGG | 0.454760 | 1_3:-58306980 | Msa0128510:intron |
| GATACCAGTGTTGGGTGTAG+TGG | 0.458939 | 1_3:-58310524 | Msa0128510:CDS |
| TCTAAAGTTTCAATAACATC+CGG | 0.459751 | 1_3:+58305122 | None:intergenic |
| GTCGTTAGCGGCCTCGGCAA+AGG | 0.462544 | 1_3:-58312799 | Msa0128510:CDS |
| AGTTTCATTTCATTTCATCT+TGG | 0.462595 | 1_3:-58312952 | Msa0128510:five_prime_UTR |
| AAAACTTCTCCATGTTCAAA+AGG | 0.464491 | 1_3:+58312586 | None:intergenic |
| GTCAGGGAACTAAGAGCATT+GGG | 0.465525 | 1_3:-58310387 | Msa0128510:CDS |
| CCCGAATTCAAATCTCGGCC+TGG | 0.467639 | 1_3:-58304802 | Msa0128510:CDS |
| GGAATGAATGAATGAGTTGT+AGG | 0.469905 | 1_3:+58312862 | None:intergenic |
| ATCACTAGCATTCATGAGAA+TGG | 0.472024 | 1_3:-58304370 | Msa0128510:CDS |
| GAAGCTGGGCTAAAATTTGT+TGG | 0.472530 | 1_3:-58305098 | Msa0128510:CDS |
| CATTGAGACCATCAATTGAC+TGG | 0.472847 | 1_3:-58307735 | Msa0128510:CDS |
| ATACCAGTGTTGGGTGTAGT+GGG | 0.477063 | 1_3:-58310523 | Msa0128510:CDS |
| GTAAGGAACATTGTTCTCTC+TGG | 0.480928 | 1_3:+58306900 | None:intergenic |
| GGAGGTGACGCGGAGGCCGC+AGG | 0.484019 | 1_3:+58312741 | None:intergenic |
| AACAAAGCAGATGGTCTCCC+AGG | 0.484640 | 1_3:+58304784 | None:intergenic |
| GGCGTCACCGCCAGCAGCAT+CGG | 0.487935 | 1_3:-58312778 | Msa0128510:CDS |
| TCAATCACACAAACATCAGC+AGG | 0.489125 | 1_3:+58311987 | None:intergenic |
| TACTTAGTCACTCATTATGA+AGG | 0.490591 | 1_3:-58303500 | Msa0128510:three_prime_UTR |
| CTATACTGTAGGTCTCATAT+TGG | 0.496171 | 1_3:-58304419 | Msa0128510:intron |
| CCTACATAATATGGATGACT+TGG | 0.496534 | 1_3:+58304838 | None:intergenic |
| CCCAAGCAAATCCCCAAGTA+AGG | 0.496781 | 1_3:+58306883 | None:intergenic |
| TACAGCAGCTTAACTTACTT+AGG | 0.505369 | 1_3:-58309057 | Msa0128510:intron |
| CCGAATTCAAATCTCGGCCT+GGG | 0.505440 | 1_3:-58304801 | Msa0128510:CDS |
| TTGAAACTTTAGAAGAAGCT+GGG | 0.507446 | 1_3:-58305112 | Msa0128510:CDS |
| TGGATGAGACAGAAGTTGTC+AGG | 0.508265 | 1_3:+58310556 | None:intergenic |
| TCCTTGGTACTTTCCAGCAG+AGG | 0.508640 | 1_3:+58309380 | None:intergenic |
| TCTGGCATGAAAATTACAAC+AGG | 0.511552 | 1_3:+58306688 | None:intergenic |
| TGTCAGGGAACTAAGAGCAT+TGG | 0.513673 | 1_3:-58310388 | Msa0128510:CDS |
| TGCCGTTTATTGAGGCTCTA+CGG | 0.516145 | 1_3:-58311828 | Msa0128510:CDS |
| TTCTTAGTCTGTGCTTGAGA+AGG | 0.517567 | 1_3:-58312243 | Msa0128510:intron |
| TTCATCCCGAATTCAAATCT+CGG | 0.519745 | 1_3:-58304807 | Msa0128510:CDS |
| ACCATTAACCTGACACTCAC+AGG | 0.520204 | 1_3:-58303701 | Msa0128510:three_prime_UTR |
| GTATGGCAATTCGGAGTATG+TGG | 0.526581 | 1_3:-58305266 | Msa0128510:CDS |
| CCAGCGTCAATGTTCAAATA+CGG | 0.527929 | 1_3:+58312619 | None:intergenic |
| TGTTAGCCTGATACCAGTGT+TGG | 0.528405 | 1_3:-58310533 | Msa0128510:CDS |
| ACCAGTGTTGGGTGTAGTGG+GGG | 0.530013 | 1_3:-58310521 | Msa0128510:CDS |
| CCAAGTCATCCATATTATGT+AGG | 0.530338 | 1_3:-58304838 | Msa0128510:CDS |
| GGATGAAAGCGGAAGACGAA+TGG | 0.530600 | 1_3:-58305072 | Msa0128510:CDS |
| GTGCAACACAAGCATGCAGT+AGG | 0.531316 | 1_3:+58307761 | None:intergenic |
| TGAGTCTATGCCGTTTATTG+AGG | 0.534928 | 1_3:-58311836 | Msa0128510:CDS |
| CCACGATCTCCAAATCCTCC+TGG | 0.535514 | 1_3:+58306955 | None:intergenic |
| GAGCACGCACGTTTGGGGCA+TGG | 0.537304 | 1_3:+58303629 | None:intergenic |
| TGAGTCGGTTGCTGTGATCC+CGG | 0.538290 | 1_3:-58312027 | Msa0128510:CDS |
| ATCTCCGGCGGAGTCGTTAG+CGG | 0.542697 | 1_3:-58312811 | Msa0128510:CDS |
| GTTTGTGTGATTGAGCTTGG+AGG | 0.545170 | 1_3:-58311978 | Msa0128510:CDS |
| GTGCTACACCTCCTGATTTG+CGG | 0.545667 | 1_3:-58308404 | Msa0128510:CDS |
| TCCCTGACACTGTGTTGTGT+CGG | 0.548570 | 1_3:+58310402 | None:intergenic |
| TTTGGAGATCGTGGTGTGAG+AGG | 0.552633 | 1_3:-58306946 | Msa0128510:CDS |
| GTTAGCCTGATACCAGTGTT+GGG | 0.554596 | 1_3:-58310532 | Msa0128510:CDS |
| TCTTGATGTTACACTTACAA+AGG | 0.556810 | 1_3:-58312386 | Msa0128510:CDS |
| AGAACAATGTTCCTTACTTG+GGG | 0.557436 | 1_3:-58306894 | Msa0128510:CDS |
| TGGGCTAAAATTTGTTGGCA+GGG | 0.558448 | 1_3:-58305093 | Msa0128510:CDS |
| TGCTGTCATACCCACTTGAA+AGG | 0.561108 | 1_3:+58311798 | None:intergenic |
| AGGTCTCATATTGGCAGCAA+CGG | 0.563048 | 1_3:-58304410 | Msa0128510:CDS |
| TACCAGTGTTGGGTGTAGTG+GGG | 0.563851 | 1_3:-58310522 | Msa0128510:CDS |
| ACACTGGTATCAGGCTAACA+TGG | 0.566475 | 1_3:+58310536 | None:intergenic |
| TGTGCTTGAGAAGGAGCGCA+AGG | 0.569431 | 1_3:-58312234 | Msa0128510:CDS |
| CCAGGAGGATTTGGAGATCG+TGG | 0.581850 | 1_3:-58306955 | Msa0128510:CDS |
| AATCCAGTTTCTGATTGCAT+CGG | 0.583198 | 1_3:+58312049 | None:intergenic |
| GAGCGCAAGGGAGATTATCT+CGG | 0.583903 | 1_3:-58312221 | Msa0128510:CDS |
| GTTTGTGTTTATATCCGAGC+GGG | 0.589396 | 1_3:+58312891 | None:intergenic |
| CAGGTTAGGATTGCCATGGT+GGG | 0.589890 | 1_3:-58308250 | Msa0128510:CDS |
| TTATAATTATGGGTTATGAG+TGG | 0.590260 | 1_3:-58303431 | Msa0128510:three_prime_UTR |
| ATGGGAAGTACCATGAGACT+TGG | 0.591140 | 1_3:-58306572 | Msa0128510:CDS |
| TCCATGTTCAAAAGGAGACA+TGG | 0.591963 | 1_3:+58312594 | None:intergenic |
| GCAAATCAGGAGGTGTAGCA+CGG | 0.592136 | 1_3:+58308406 | None:intergenic |
| TTTACAGGTTAGGATTGCCA+TGG | 0.595375 | 1_3:-58308254 | Msa0128510:intron |
| TGCAACACAAGCATGCAGTA+GGG | 0.596048 | 1_3:+58307762 | None:intergenic |
| AAAATATCAACCTTCCCGCT+CGG | 0.598030 | 1_3:-58312905 | Msa0128510:five_prime_UTR |
| ATTGAGCTTGGAGGCACTGT+GGG | 0.598258 | 1_3:-58311969 | Msa0128510:intron |
| TGATTGTTTGATGTGTATAG+AGG | 0.598464 | 1_3:-58303790 | Msa0128510:three_prime_UTR |
| TGGCGGTGACGCCTTTGCCG+AGG | 0.599015 | 1_3:+58312788 | None:intergenic |
| ACAGGTTAGGATTGCCATGG+TGG | 0.599284 | 1_3:-58308251 | Msa0128510:intron |
| ACGGCAATTATCCTTTCAAG+TGG | 0.601495 | 1_3:-58311809 | Msa0128510:CDS |
| CAGAAGCACATGCCGCAGCA+TGG | 0.601979 | 1_3:-58307568 | Msa0128510:CDS |
| GAGGCCGCTAACGACTCCGC+CGG | 0.602079 | 1_3:+58312807 | None:intergenic |
| GGGGCATGGTGAACTGAACA+AGG | 0.602093 | 1_3:+58303643 | None:intergenic |
| TTTAGCAAGTCGCTCTGCTG+AGG | 0.603158 | 1_3:-58310349 | Msa0128510:intron |
| GTGTTTATATCCGAGCGGGA+AGG | 0.606105 | 1_3:+58312895 | None:intergenic |
| ACTGAAAACTTACTGGAACA+TGG | 0.606549 | 1_3:+58309339 | None:intergenic |
| CTTCAGAGTCTTCCATGCTG+CGG | 0.607051 | 1_3:+58307556 | None:intergenic |
| CTGCTGTAAAATTGAGTGGT+GGG | 0.610647 | 1_3:+58309072 | None:intergenic |
| CTGATTGCATCGGTGATATG+CGG | 0.611112 | 1_3:+58312059 | None:intergenic |
| ATTCGGAGTATGTGGATGAA+CGG | 0.613690 | 1_3:-58305258 | Msa0128510:CDS |
| GAGCGACTTGCTAAAAGATG+AGG | 0.613956 | 1_3:+58310357 | None:intergenic |
| GCTTGTGTCTTGGTTCCAGG+AGG | 0.614810 | 1_3:-58306970 | Msa0128510:CDS |
| GGTCTTCATTTCCATCAACC+GGG | 0.617073 | 1_3:+58312009 | None:intergenic |
| AAAAGGAGCACGCACGTTTG+GGG | 0.618322 | 1_3:+58303624 | None:intergenic |
| TCTTCGAGATCCAAGTCTCA+TGG | 0.624956 | 1_3:+58306562 | None:intergenic |
| TGAAAGCGGAAGACGAATGG+AGG | 0.626991 | 1_3:-58305069 | Msa0128510:intron |
| GCCATGGTGGGAAAATATGT+TGG | 0.628848 | 1_3:-58308238 | Msa0128510:CDS |
| GTCCATTGCCGCAAATCAGG+AGG | 0.628942 | 1_3:+58308396 | None:intergenic |
| CGGCAATTATCCTTTCAAGT+GGG | 0.631841 | 1_3:-58311808 | Msa0128510:intron |
| GCCGACACAACACAGTGTCA+GGG | 0.640779 | 1_3:-58310403 | Msa0128510:CDS |
| GCCTCTGCTGGAAAGTACCA+AGG | 0.645176 | 1_3:-58309381 | Msa0128510:CDS |
| ACAGGGTTCTAGGACTCACA+TGG | 0.646100 | 1_3:-58306591 | Msa0128510:intron |
| GAGACTCACTCTAAGTAACA+GGG | 0.646615 | 1_3:+58309189 | None:intergenic |
| TGTTCTTGATGATGGCGGAG+AGG | 0.649503 | 1_3:-58312563 | Msa0128510:intron |
| GATTGAGCTTGGAGGCACTG+TGG | 0.652060 | 1_3:-58311970 | Msa0128510:CDS |
| CGCAGCATGGAAGACTCTGA+AGG | 0.652129 | 1_3:-58307555 | Msa0128510:intron |
| GTGCTTGAGAAGGAGCGCAA+GGG | 0.658499 | 1_3:-58312233 | Msa0128510:CDS |
| CCGTATTTGAACATTGACGC+TGG | 0.659655 | 1_3:-58312619 | Msa0128510:CDS |
| AATCAGAAACTGGATTGAGT+CGG | 0.661872 | 1_3:-58312042 | Msa0128510:CDS |
| GCTGCTGTAAAATTGAGTGG+TGG | 0.662926 | 1_3:+58309071 | None:intergenic |
| TTTGTTGGCAGGGATGAAAG+CGG | 0.667172 | 1_3:-58305083 | Msa0128510:CDS |
| AGGATAATAATATTACTACT+GGG | 0.667804 | 1_3:-58312366 | Msa0128510:CDS |
| AAGTACGTTCTCATCTCCGG+CGG | 0.672070 | 1_3:-58312823 | Msa0128510:CDS |
| TAAGCTGCTGTAAAATTGAG+TGG | 0.672139 | 1_3:+58309068 | None:intergenic |
| ATGTGTATAGAGGTCTGAAG+CGG | 0.677343 | 1_3:-58303780 | Msa0128510:three_prime_UTR |
| GACGACGCCGATGCTGCTGG+CGG | 0.688026 | 1_3:+58312771 | None:intergenic |
| GGCGTCGTCCTCAAAGCCTG+CGG | 0.692971 | 1_3:-58312757 | Msa0128510:CDS |
| CAATCACACAAACATCAGCA+GGG | 0.701082 | 1_3:+58311988 | None:intergenic |
| AGACTCACTCTAAGTAACAG+GGG | 0.704240 | 1_3:+58309190 | None:intergenic |
| CAGGGTTCTAGGACTCACAT+GGG | 0.704702 | 1_3:-58306590 | Msa0128510:CDS |
| AAATTAACTTGCTTATAGTG+TGG | 0.711685 | 1_3:+58303738 | None:intergenic |
| GTCTCATATTGGCAGCAACG+GGG | 0.722190 | 1_3:-58304408 | Msa0128510:CDS |
| TAGTACTAACAGATTCAGTG+AGG | 0.746597 | 1_3:+58308349 | None:intergenic |
| ACGGCATCGTCATAGATACG+AGG | 0.761487 | 1_3:-58305239 | Msa0128510:intron |
| TGTTTGTGTTTATATCCGAG+CGG | 0.765064 | 1_3:+58312890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTGAGAAA+CGG | + | chr1_3:58303759-58303778 | None:intergenic | 10.0% |
| !!! | AGTTCAATTTTAATTTATTA+TGG | - | chr1_3:58303907-58303926 | Msa0128510:intron | 10.0% |
| !! | TAATAAATTAAAGATTATCT+GGG | + | chr1_3:58307114-58307133 | None:intergenic | 10.0% |
| !! | TCTAAAAAAATTAAAAAAAG+GGG | - | chr1_3:58308552-58308571 | Msa0128510:intron | 10.0% |
| !! | TGAAGATAATATTATAATTA+TGG | - | chr1_3:58312966-58312985 | Msa0128510:five_prime_UTR | 10.0% |
| !! | GAAGATAATATTATAATTAT+GGG | - | chr1_3:58312967-58312986 | Msa0128510:five_prime_UTR | 10.0% |
| !!! | ATTTTAATTTATTATGGTTC+TGG | - | chr1_3:58303913-58303932 | Msa0128510:intron | 15.0% |
| !!! | AATTTTATTTAAGATCAATC+TGG | - | chr1_3:58304956-58304975 | Msa0128510:intron | 15.0% |
| !!! | TGATGTTTTATTTGATATTA+TGG | - | chr1_3:58305564-58305583 | Msa0128510:intron | 15.0% |
| !!! | AAAAATACGTATGTTTTTAT+AGG | - | chr1_3:58305599-58305618 | Msa0128510:intron | 15.0% |
| !!! | AAAATACGTATGTTTTTATA+GGG | - | chr1_3:58305600-58305619 | Msa0128510:intron | 15.0% |
| !!! | TATAATCATTATTTTGCATT+TGG | - | chr1_3:58306299-58306318 | Msa0128510:intron | 15.0% |
| !! | AATAAAGATTAAAAGTTTGT+CGG | + | chr1_3:58306439-58306458 | None:intergenic | 15.0% |
| !! | CTAATAAATTAAAGATTATC+TGG | + | chr1_3:58307115-58307134 | None:intergenic | 15.0% |
| !!! | TCAAATTTTTTCATCAATTA+AGG | + | chr1_3:58307522-58307541 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTCGTTTAAATC+TGG | - | chr1_3:58308357-58308376 | Msa0128510:intron | 15.0% |
| !! | AAATTGCATTTAAAGAAATT+TGG | - | chr1_3:58308750-58308769 | Msa0128510:intron | 15.0% |
| !!! | GCTTATTTAATTTTATTTTG+TGG | - | chr1_3:58308799-58308818 | Msa0128510:intron | 15.0% |
| !!! | GTAATTTAAAATCTATTCTT+AGG | - | chr1_3:58309644-58309663 | Msa0128510:intron | 15.0% |
| !!! | ATTTTATGTAAATGAATATC+AGG | - | chr1_3:58310146-58310165 | Msa0128510:intron | 15.0% |
| !! | AATAGTAGAATATATTACTT+TGG | - | chr1_3:58310319-58310338 | Msa0128510:intron | 15.0% |
| !!! | TCATTAAGAAACATTTTAAA+CGG | - | chr1_3:58312932-58312951 | Msa0128510:five_prime_UTR | 15.0% |
| !!! | TTTTGCTTTTTGACTTTTAT+AGG | - | chr1_3:58303968-58303987 | Msa0128510:intron | 20.0% |
| !! | AAGGATAATAATATTACTAC+TGG | - | chr1_3:58304041-58304060 | Msa0128510:intron | 20.0% |
| !! | AGGATAATAATATTACTACT+GGG | - | chr1_3:58304042-58304061 | Msa0128510:intron | 20.0% |
| !!! | TTTATGTTGATTTTGCTTTA+TGG | - | chr1_3:58304129-58304148 | Msa0128510:intron | 20.0% |
| !!! | TGATATTTTTGTTGATCTAT+AGG | - | chr1_3:58304543-58304562 | Msa0128510:intron | 20.0% |
| !!! | GATATTTTTGTTGATCTATA+GGG | - | chr1_3:58304544-58304563 | Msa0128510:intron | 20.0% |
| !!! | ATATTTTTGTTGATCTATAG+GGG | - | chr1_3:58304545-58304564 | Msa0128510:intron | 20.0% |
| !! | TCTTTACCTTTAGTATTATA+TGG | + | chr1_3:58304784-58304803 | None:intergenic | 20.0% |
| !! | TACATATAATCCAAATACTT+AGG | - | chr1_3:58304895-58304914 | Msa0128510:intron | 20.0% |
| !!! | ATAATTCTATGTACCATTTT+TGG | - | chr1_3:58304985-58305004 | Msa0128510:intron | 20.0% |
| !!! | TAATTTGAAATTTAAGCACA+TGG | + | chr1_3:58305091-58305110 | None:intergenic | 20.0% |
| !! | GTGCTTAAATTTCAAATTAT+TGG | - | chr1_3:58305092-58305111 | Msa0128510:CDS | 20.0% |
| !! | TCTTAAAAGATGTACATTTA+TGG | - | chr1_3:58305442-58305461 | Msa0128510:intron | 20.0% |
| !! | TTTATTTGATATTATGGCAT+TGG | - | chr1_3:58305570-58305589 | Msa0128510:intron | 20.0% |
| !!! | AGTTAATTTTAAATGCATCT+AGG | + | chr1_3:58306107-58306126 | None:intergenic | 20.0% |
| !! | TAAAATTAACTGTGTAACAA+TGG | - | chr1_3:58306116-58306135 | Msa0128510:intron | 20.0% |
| !! | AGATAATATATTTCTCTGTT+TGG | - | chr1_3:58306501-58306520 | Msa0128510:intron | 20.0% |
| !! | GTAAATCAATAAATAGATTG+TGG | - | chr1_3:58306667-58306686 | Msa0128510:intron | 20.0% |
| !!! | TTGTCTTTTATTTTCATAAC+TGG | - | chr1_3:58307386-58307405 | Msa0128510:intron | 20.0% |
| !! | AAAAACTATAAGTCATATGT+TGG | - | chr1_3:58307800-58307819 | Msa0128510:intron | 20.0% |
| !! | TTCATATTTATCTGTTGTAA+AGG | - | chr1_3:58308202-58308221 | Msa0128510:intron | 20.0% |
| !! | AATCCAAATATGTTGATATT+CGG | + | chr1_3:58308518-58308537 | None:intergenic | 20.0% |
| !!! | AAATTAAAAAAAGGGGTTTT+TGG | - | chr1_3:58308559-58308578 | Msa0128510:intron | 20.0% |
| !! | ATCATAGATATTAAAGCAAT+GGG | + | chr1_3:58309022-58309041 | None:intergenic | 20.0% |
| !! | ACAAAATTTCAGATTCAATA+TGG | + | chr1_3:58309268-58309287 | None:intergenic | 20.0% |
| !! | TGTAATGACAATATTTGTTT+GGG | - | chr1_3:58309393-58309412 | Msa0128510:intron | 20.0% |
| !!! | TAAAATCTATTCTTAGGTTT+TGG | - | chr1_3:58309650-58309669 | Msa0128510:intron | 20.0% |
| !!! | AAAATCTATTCTTAGGTTTT+GGG | - | chr1_3:58309651-58309670 | Msa0128510:intron | 20.0% |
| !!! | TGTAGTGTTTTAATAATTGA+TGG | - | chr1_3:58309931-58309950 | Msa0128510:intron | 20.0% |
| !! | GAAAAAAAAAGTTATCTGAT+GGG | + | chr1_3:58310013-58310032 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAGTTATCTGA+TGG | + | chr1_3:58310014-58310033 | None:intergenic | 20.0% |
| !!! | GATAACTTTTTTTTTCTTTC+TGG | - | chr1_3:58310017-58310036 | Msa0128510:intron | 20.0% |
| !! | GTAATATATTCTACTATTGT+GGG | + | chr1_3:58310317-58310336 | None:intergenic | 20.0% |
| !! | AGTAATATATTCTACTATTG+TGG | + | chr1_3:58310318-58310337 | None:intergenic | 20.0% |
| !! | TGTATACAACATTAATTAGA+GGG | - | chr1_3:58310345-58310364 | Msa0128510:intron | 20.0% |
| !!! | TAAATTCTTTAGGATTACAA+AGG | + | chr1_3:58310656-58310675 | None:intergenic | 20.0% |
| !!! | AGATTTGAAAAAGTTGATTT+TGG | - | chr1_3:58310722-58310741 | Msa0128510:intron | 20.0% |
| !! | GGAAAAGATGTAATATAATT+AGG | - | chr1_3:58310825-58310844 | Msa0128510:intron | 20.0% |
| !!! | TAATATAATTAGGAGTATGT+TGG | - | chr1_3:58310835-58310854 | Msa0128510:intron | 20.0% |
| !! | ACAATCAATTGAAGAATATA+TGG | + | chr1_3:58311005-58311024 | None:intergenic | 20.0% |
| !! | TCAATACTAAATTAGAAAAC+AGG | + | chr1_3:58311250-58311269 | None:intergenic | 20.0% |
| !! | GCTTATAATTTCTTGAAAAA+TGG | - | chr1_3:58311864-58311883 | Msa0128510:intron | 20.0% |
| !!! | ATTTCTACATTACTTTTCTA+AGG | - | chr1_3:58312093-58312112 | Msa0128510:intron | 20.0% |
| !! | ACAAATTATGTTAAATCAGA+AGG | + | chr1_3:58312554-58312573 | None:intergenic | 20.0% |
| ! | AGTTTCATTTCATTTCATCT+TGG | - | chr1_3:58303456-58303475 | Msa0128510:three_prime_UTR | 25.0% |
| !! | AGAACGTACTTCATATTTTT+GGG | + | chr1_3:58303576-58303595 | None:intergenic | 25.0% |
| !!! | TTGACTTTTATAGGTTGATT+TGG | - | chr1_3:58303977-58303996 | Msa0128510:intron | 25.0% |
| !!! | TTTATAGGTTGATTTGGATT+TGG | - | chr1_3:58303983-58304002 | Msa0128510:intron | 25.0% |
| !!! | TTATAGGTTGATTTGGATTT+GGG | - | chr1_3:58303984-58304003 | Msa0128510:intron | 25.0% |
| !! | GCTTGTTTCATTTTATGTTA+TGG | - | chr1_3:58304083-58304102 | Msa0128510:intron | 25.0% |
| !!! | TGAATAATGGATATTTTGTG+TGG | - | chr1_3:58304273-58304292 | Msa0128510:intron | 25.0% |
| !!! | TTTAGTATTATATGGACTAG+AGG | + | chr1_3:58304776-58304795 | None:intergenic | 25.0% |
| ! | TCTAGTCCATATAATACTAA+AGG | - | chr1_3:58304775-58304794 | Msa0128510:intron | 25.0% |
| !! | ACAAGTAATGTCAATTTTGT+TGG | - | chr1_3:58304857-58304876 | Msa0128510:intron | 25.0% |
| ! | CATTAGTACTATACCAAAAA+TGG | + | chr1_3:58305001-58305020 | None:intergenic | 25.0% |
| ! | TATTGGTAGACTTCTTAAAT+TGG | - | chr1_3:58305391-58305410 | Msa0128510:intron | 25.0% |
| ! | TACATTTATGGATGTTTAGA+AGG | - | chr1_3:58305454-58305473 | Msa0128510:intron | 25.0% |
| !! | AGTCAAGACTTCTTTTAAAT+AGG | - | chr1_3:58305536-58305555 | Msa0128510:intron | 25.0% |
| ! | GTAAACATCAATAATTCATG+TGG | + | chr1_3:58306235-58306254 | None:intergenic | 25.0% |
| ! | TTGGTTAATCTATAACTCAA+CGG | - | chr1_3:58306375-58306394 | Msa0128510:intron | 25.0% |
| ! | TTAGTGAATGTTTGTGATAT+TGG | - | chr1_3:58306617-58306636 | Msa0128510:intron | 25.0% |
| ! | TAGTGAATGTTTGTGATATT+GGG | - | chr1_3:58306618-58306637 | Msa0128510:intron | 25.0% |
| ! | TATTGCCTCATTCTATATTT+AGG | - | chr1_3:58306840-58306859 | Msa0128510:intron | 25.0% |
| ! | ATTCTCCTAAATATAGAATG+AGG | + | chr1_3:58306848-58306867 | None:intergenic | 25.0% |
| !!! | TTTTTTACCATGAAGTTAAC+TGG | - | chr1_3:58306904-58306923 | Msa0128510:CDS | 25.0% |
| ! | ATAATTCACTGAAAACTTAC+TGG | + | chr1_3:58307079-58307098 | None:intergenic | 25.0% |
| !! | TTTTCTGTATATTGTTTCAC+AGG | - | chr1_3:58307148-58307167 | Msa0128510:intron | 25.0% |
| ! | TTCATGATGTACCAAATATT+TGG | - | chr1_3:58307189-58307208 | Msa0128510:intron | 25.0% |
| ! | TAAAAATAGCCAAGATACAA+TGG | + | chr1_3:58307261-58307280 | None:intergenic | 25.0% |
| ! | CAACAATATTGTAATAAGAG+AGG | + | chr1_3:58307466-58307485 | None:intergenic | 25.0% |
| !!! | TTTTTTCATCAATTAAGGCA+AGG | + | chr1_3:58307517-58307536 | None:intergenic | 25.0% |
| !!! | CATTTTGAAATTTACAGGTT+AGG | - | chr1_3:58308144-58308163 | Msa0128510:intron | 25.0% |
| ! | CAGGATATCAATATATGTTA+TGG | - | chr1_3:58308263-58308282 | Msa0128510:intron | 25.0% |
| ! | TTAAAACTGCTATCACTTAT+TGG | - | chr1_3:58308446-58308465 | Msa0128510:intron | 25.0% |
| ! | AAGTTTAGTCTATTCTATCT+AGG | - | chr1_3:58308907-58308926 | Msa0128510:intron | 25.0% |
| ! | ATCACATAACTAAAATCTGA+AGG | + | chr1_3:58308946-58308965 | None:intergenic | 25.0% |
| ! | TCATAGATATTAAAGCAATG+GGG | + | chr1_3:58309021-58309040 | None:intergenic | 25.0% |
| ! | GATCATAGATATTAAAGCAA+TGG | + | chr1_3:58309023-58309042 | None:intergenic | 25.0% |
| ! | GGATTTCTTAGAATTTAGAT+CGG | - | chr1_3:58309071-58309090 | Msa0128510:CDS | 25.0% |
| ! | GATTTCTTAGAATTTAGATC+GGG | - | chr1_3:58309072-58309091 | Msa0128510:CDS | 25.0% |
| !!! | TGTTTACAAGTCAGTTTTTT+AGG | + | chr1_3:58309108-58309127 | None:intergenic | 25.0% |
| ! | TTTGTACTGTATTAATCATG+TGG | + | chr1_3:58309350-58309369 | None:intergenic | 25.0% |
| ! | CTGTAATGACAATATTTGTT+TGG | - | chr1_3:58309392-58309411 | Msa0128510:intron | 25.0% |
| ! | GTAATGACAATATTTGTTTG+GGG | - | chr1_3:58309394-58309413 | Msa0128510:intron | 25.0% |
| ! | ATGAAAATTACAACAGGATT+TGG | + | chr1_3:58309717-58309736 | None:intergenic | 25.0% |
| ! | AAACACACCAATAGTTATTA+GGG | + | chr1_3:58310294-58310313 | None:intergenic | 25.0% |
| ! | GTGTATACAACATTAATTAG+AGG | - | chr1_3:58310344-58310363 | Msa0128510:intron | 25.0% |
| ! | TATTGCATTTCAAATGTGAT+TGG | - | chr1_3:58310463-58310482 | Msa0128510:intron | 25.0% |
| ! | ATTGCATTTCAAATGTGATT+GGG | - | chr1_3:58310464-58310483 | Msa0128510:intron | 25.0% |
| ! | ATAAAAAAATTCCACAACAC+AGG | + | chr1_3:58310960-58310979 | None:intergenic | 25.0% |
| ! | ATCAATTGAAGAATATATGG+AGG | + | chr1_3:58311002-58311021 | None:intergenic | 25.0% |
| ! | GTTGTATTATACTGTTTAGT+TGG | - | chr1_3:58311035-58311054 | Msa0128510:intron | 25.0% |
| ! | AACAGATGAAGATATTAACA+TGG | + | chr1_3:58311110-58311129 | None:intergenic | 25.0% |
| !!! | TAACCTTTGTTTTTAGTTAC+TGG | - | chr1_3:58311201-58311220 | Msa0128510:intron | 25.0% |
| !!! | ATTTAGTATTGACATTGTTC+AGG | - | chr1_3:58311258-58311277 | Msa0128510:intron | 25.0% |
| !! | TCTAAAGTTTCAATAACATC+CGG | + | chr1_3:58311289-58311308 | None:intergenic | 25.0% |
| ! | TTATAAGCATCAATTCACAT+GGG | + | chr1_3:58311852-58311871 | None:intergenic | 25.0% |
| ! | ATTATAAGCATCAATTCACA+TGG | + | chr1_3:58311853-58311872 | None:intergenic | 25.0% |
| ! | GAGTAGAAATAATTGAAACA+GGG | + | chr1_3:58311946-58311965 | None:intergenic | 25.0% |
| !! | AAGGTAAATTGATTCTCTTT+AGG | - | chr1_3:58312112-58312131 | Msa0128510:intron | 25.0% |
| !! | AGGTAAATTGATTCTCTTTA+GGG | - | chr1_3:58312113-58312132 | Msa0128510:intron | 25.0% |
| !! | TTCTCTTTAGGGAAAATAAT+TGG | - | chr1_3:58312124-58312143 | Msa0128510:intron | 25.0% |
| !! | TCTCTTTAGGGAAAATAATT+GGG | - | chr1_3:58312125-58312144 | Msa0128510:intron | 25.0% |
| ! | ATTATAAATCTCAGAACTTC+TGG | + | chr1_3:58312309-58312328 | None:intergenic | 25.0% |
| ! | TTAGTAATAGAGATGCTAAA+AGG | - | chr1_3:58312347-58312366 | Msa0128510:intron | 25.0% |
| !! | ACTGGTATTGAAAACAATTA+CGG | - | chr1_3:58312378-58312397 | Msa0128510:CDS | 25.0% |
| !!! | AAATTAACTTGCTTATAGTG+TGG | + | chr1_3:58312673-58312692 | None:intergenic | 25.0% |
| !!! | TACTTCATATTTTTGGGTTG+GGG | + | chr1_3:58303570-58303589 | None:intergenic | 30.0% |
| !!! | GTACTTCATATTTTTGGGTT+GGG | + | chr1_3:58303571-58303590 | None:intergenic | 30.0% |
| ! | GAGAACGTACTTCATATTTT+TGG | + | chr1_3:58303577-58303596 | None:intergenic | 30.0% |
| AAAACTTCTCCATGTTCAAA+AGG | + | chr1_3:58303825-58303844 | None:intergenic | 30.0% | |
| ! | GAAGTTTTTGTTCTTGATGA+TGG | - | chr1_3:58303837-58303856 | Msa0128510:intron | 30.0% |
| ACTTCGTACAAGTGTATTTA+TGG | + | chr1_3:58303890-58303909 | None:intergenic | 30.0% | |
| TCTTGATGTTACACTTACAA+AGG | - | chr1_3:58304022-58304041 | Msa0128510:intron | 30.0% | |
| TACTACTGGGAAAATATATC+AGG | - | chr1_3:58304055-58304074 | Msa0128510:intron | 30.0% | |
| GTTAACTGATTGCTGAATAA+TGG | - | chr1_3:58304260-58304279 | Msa0128510:intron | 30.0% | |
| ! | GTTGGGATTTTTGATGAAAT+AGG | - | chr1_3:58304321-58304340 | Msa0128510:three_prime_UTR | 30.0% |
| TTATGCTCTTTCATAATCGA+TGG | + | chr1_3:58304523-58304542 | None:intergenic | 30.0% | |
| AGTAGTTAAAACGTGTACAT+GGG | + | chr1_3:58304681-58304700 | None:intergenic | 30.0% | |
| TAGTAGTTAAAACGTGTACA+TGG | + | chr1_3:58304682-58304701 | None:intergenic | 30.0% | |
| !!! | TACACGTTTTAACTACTACA+TGG | - | chr1_3:58304684-58304703 | Msa0128510:intron | 30.0% |
| AAGTTATTGACCAATACATC+TGG | - | chr1_3:58305170-58305189 | Msa0128510:intron | 30.0% | |
| AGTTATTGACCAATACATCT+GGG | - | chr1_3:58305171-58305190 | Msa0128510:intron | 30.0% | |
| GAAATAAAATGCACCCAAAA+AGG | - | chr1_3:58305265-58305284 | Msa0128510:CDS | 30.0% | |
| !!! | TAAAAGCATCAAGCCTTTTT+GGG | + | chr1_3:58305281-58305300 | None:intergenic | 30.0% |
| !!! | ATAAAAGCATCAAGCCTTTT+TGG | + | chr1_3:58305282-58305301 | None:intergenic | 30.0% |
| ! | TTTTCTCTCCTTTAGTGTAT+CGG | + | chr1_3:58305347-58305366 | None:intergenic | 30.0% |
| AAATTGGTAGAACTATCTCT+TGG | - | chr1_3:58305407-58305426 | Msa0128510:intron | 30.0% | |
| !! | TTGATATTATGGCATTGGTT+TGG | - | chr1_3:58305575-58305594 | Msa0128510:intron | 30.0% |
| !! | TGATATTATGGCATTGGTTT+GGG | - | chr1_3:58305576-58305595 | Msa0128510:intron | 30.0% |
| TGGTTAATCTATAACTCAAC+GGG | - | chr1_3:58306376-58306395 | Msa0128510:intron | 30.0% | |
| ! | GAGGCAATAATCCTTTAAAA+AGG | + | chr1_3:58306829-58306848 | None:intergenic | 30.0% |
| CTATATTTAGGAGAATACAG+TGG | - | chr1_3:58306852-58306871 | Msa0128510:CDS | 30.0% | |
| ATAATCTCCAGTTAACTTCA+TGG | + | chr1_3:58306914-58306933 | None:intergenic | 30.0% | |
| ! | TGATGTTAGTTTCACTATCT+CGG | - | chr1_3:58306976-58306995 | Msa0128510:CDS | 30.0% |
| ! | AAACTGTGAAAGTTTTTCCT+TGG | + | chr1_3:58307047-58307066 | None:intergenic | 30.0% |
| ! | AGTTTTCAGTGAATTATGCT+TGG | - | chr1_3:58307082-58307101 | Msa0128510:intron | 30.0% |
| !! | TTTTTAGTGCCATTGTATCT+TGG | - | chr1_3:58307249-58307268 | Msa0128510:intron | 30.0% |
| ! | ATTGTTTTCCTCTTAATGTC+CGG | - | chr1_3:58307290-58307309 | Msa0128510:intron | 30.0% |
| ! | TTGATTCTGAAAATAGAAGC+CGG | + | chr1_3:58307312-58307331 | None:intergenic | 30.0% |
| !! | AGATAAACTCAAGTTGACAA+CGG | + | chr1_3:58307639-58307658 | None:intergenic | 30.0% |
| CATATGTTGGAATCTCTTAA+TGG | - | chr1_3:58307813-58307832 | Msa0128510:intron | 30.0% | |
| AATTGAAACACGTCATATGT+TGG | - | chr1_3:58307864-58307883 | Msa0128510:intron | 30.0% | |
| !!! | CAGAGCATTTTGAAATTTAC+AGG | - | chr1_3:58308139-58308158 | Msa0128510:intron | 30.0% |
| GTTCTTGGGATAAATATCAA+GGG | + | chr1_3:58308241-58308260 | None:intergenic | 30.0% | |
| TGTTCTTGGGATAAATATCA+AGG | + | chr1_3:58308242-58308261 | None:intergenic | 30.0% | |
| ! | TGAATATGGCATCAAACTTT+TGG | + | chr1_3:58308389-58308408 | None:intergenic | 30.0% |
| CAGATTATTGCTAGTGAATA+TGG | + | chr1_3:58308403-58308422 | None:intergenic | 30.0% | |
| !! | ATCTGATTTTGACATCTTTG+CGG | - | chr1_3:58308418-58308437 | Msa0128510:intron | 30.0% |
| ! | CTAGAAGCACATACAATTTA+TGG | - | chr1_3:58308884-58308903 | Msa0128510:intron | 30.0% |
| TCTATTCTATCTAGGAAGTT+TGG | - | chr1_3:58308915-58308934 | Msa0128510:intron | 30.0% | |
| TGGACTTTCTGTGATAAAAT+TGG | - | chr1_3:58309050-58309069 | Msa0128510:intron | 30.0% | |
| ! | TATCTAGAGTGTGATCTTAT+TGG | - | chr1_3:58309199-58309218 | Msa0128510:CDS | 30.0% |
| ! | TGATCTTATTGGCCTAATAA+TGG | - | chr1_3:58309210-58309229 | Msa0128510:CDS | 30.0% |
| ! | GATCTTATTGGCCTAATAAT+GGG | - | chr1_3:58309211-58309230 | Msa0128510:CDS | 30.0% |
| GTAAATACTACTATCCAATG+TGG | - | chr1_3:58309318-58309337 | Msa0128510:intron | 30.0% | |
| CACAACAAGGATAATGATTA+GGG | + | chr1_3:58309780-58309799 | None:intergenic | 30.0% | |
| TCACAACAAGGATAATGATT+AGG | + | chr1_3:58309781-58309800 | None:intergenic | 30.0% | |
| AATATGGCTTATCTGTGAAA+GGG | + | chr1_3:58309985-58310004 | None:intergenic | 30.0% | |
| AAATATGGCTTATCTGTGAA+AGG | + | chr1_3:58309986-58310005 | None:intergenic | 30.0% | |
| TATCTGATGGGAAAGAAATA+TGG | + | chr1_3:58310001-58310020 | None:intergenic | 30.0% | |
| ! | AAATCTCAGTTTTCTTGTTC+TGG | - | chr1_3:58310057-58310076 | Msa0128510:intron | 30.0% |
| ! | AATCTCAGTTTTCTTGTTCT+GGG | - | chr1_3:58310058-58310077 | Msa0128510:intron | 30.0% |
| TACATAAAATGATTCCCTGA+TGG | + | chr1_3:58310136-58310155 | None:intergenic | 30.0% | |
| ATCACAGAACATAATGAATC+AGG | + | chr1_3:58310172-58310191 | None:intergenic | 30.0% | |
| TTAGGGGTAGTTTAGTAAAA+GGG | + | chr1_3:58310277-58310296 | None:intergenic | 30.0% | |
| ATTAGGGGTAGTTTAGTAAA+AGG | + | chr1_3:58310278-58310297 | None:intergenic | 30.0% | |
| AAACTACCCCTAATAACTAT+TGG | - | chr1_3:58310284-58310303 | Msa0128510:intron | 30.0% | |
| AACACACCAATAGTTATTAG+GGG | + | chr1_3:58310293-58310312 | None:intergenic | 30.0% | |
| GAAACACACCAATAGTTATT+AGG | + | chr1_3:58310295-58310314 | None:intergenic | 30.0% | |
| !!! | CTGAGACACTTATTTTGAAA+CGG | - | chr1_3:58310434-58310453 | Msa0128510:intron | 30.0% |
| ATTCTTCCTTACTGTAGATA+AGG | - | chr1_3:58310498-58310517 | Msa0128510:intron | 30.0% | |
| TTCTTCCTTACTGTAGATAA+GGG | - | chr1_3:58310499-58310518 | Msa0128510:intron | 30.0% | |
| !!! | TTCTTTTTTCACCTTTTGCT+AGG | + | chr1_3:58310604-58310623 | None:intergenic | 30.0% |
| GAGGTAGTAGTAAATTCTTT+AGG | + | chr1_3:58310666-58310685 | None:intergenic | 30.0% | |
| ! | AAGTAATTTTCTCTCCTGAA+GGG | + | chr1_3:58310771-58310790 | None:intergenic | 30.0% |
| ! | TAAGTAATTTTCTCTCCTGA+AGG | + | chr1_3:58310772-58310791 | None:intergenic | 30.0% |
| GAGTATTTATTACAGATTGC+AGG | - | chr1_3:58310804-58310823 | Msa0128510:intron | 30.0% | |
| GATGTCGTTGAAAATTTGAA+TGG | - | chr1_3:58310871-58310890 | Msa0128510:intron | 30.0% | |
| ! | TTGAATGGAGTCTTATAAGA+AGG | - | chr1_3:58310886-58310905 | Msa0128510:intron | 30.0% |
| ! | TGAATGGAGTCTTATAAGAA+GGG | - | chr1_3:58310887-58310906 | Msa0128510:intron | 30.0% |
| ! | AAGAAGGGGAAATGATATTT+TGG | - | chr1_3:58310902-58310921 | Msa0128510:intron | 30.0% |
| !!! | GAAATGATATTTTGGAACTG+AGG | - | chr1_3:58310910-58310929 | Msa0128510:intron | 30.0% |
| TATAATGAAAACCTGTGTTG+TGG | - | chr1_3:58310946-58310965 | Msa0128510:intron | 30.0% | |
| CAGTATAATACAACACACAA+AGG | + | chr1_3:58311029-58311048 | None:intergenic | 30.0% | |
| CATCCAGTAACTAAAAACAA+AGG | + | chr1_3:58311207-58311226 | None:intergenic | 30.0% | |
| ! | ATTGAAACTTTAGAAGAAGC+TGG | - | chr1_3:58311295-58311314 | Msa0128510:intron | 30.0% |
| ! | TTGAAACTTTAGAAGAAGCT+GGG | - | chr1_3:58311296-58311315 | Msa0128510:intron | 30.0% |
| ! | TATATTTTCCTGCTTGGATA+GGG | - | chr1_3:58311362-58311381 | Msa0128510:intron | 30.0% |
| ! | GGTACTTTTCAGTTATGAAT+TGG | - | chr1_3:58311651-58311670 | Msa0128510:intron | 30.0% |
| ATTAACACAGATGGTGTAAA+CGG | + | chr1_3:58311722-58311741 | None:intergenic | 30.0% | |
| TTAATACTGTGAGATGAAGA+TGG | - | chr1_3:58311737-58311756 | Msa0128510:intron | 30.0% | |
| ATCAATTCACATGGGAATTT+CGG | + | chr1_3:58311844-58311863 | None:intergenic | 30.0% | |
| CGAGTAGAAATAATTGAAAC+AGG | + | chr1_3:58311947-58311966 | None:intergenic | 30.0% | |
| GATCTACGATTCTTTACTAT+AGG | - | chr1_3:58312066-58312085 | Msa0128510:CDS | 30.0% | |
| AAGCTATACAACTAAGGAAA+AGG | + | chr1_3:58312505-58312524 | None:intergenic | 30.0% | |
| ! | TAAATCAGAAGGCATGATAT+TGG | + | chr1_3:58312543-58312562 | None:intergenic | 30.0% |
| TGATTGTTTGATGTGTATAG+AGG | - | chr1_3:58312618-58312637 | Msa0128510:CDS | 30.0% | |
| TTAGCGAGCATAAAAAGAAA+AGG | + | chr1_3:58312804-58312823 | None:intergenic | 30.0% | |
| ! | TCTTTTTATGCTCGCTAATT+AGG | - | chr1_3:58312806-58312825 | Msa0128510:CDS | 30.0% |
| TACTTAGTCACTCATTATGA+AGG | - | chr1_3:58312908-58312927 | Msa0128510:five_prime_UTR | 30.0% | |
| TGTTTGTGTTTATATCCGAG+CGG | + | chr1_3:58303521-58303540 | None:intergenic | 35.0% | |
| GGAATGAATGAATGAGTTGT+AGG | + | chr1_3:58303549-58303568 | None:intergenic | 35.0% | |
| !!! | CGTACTTCATATTTTTGGGT+TGG | + | chr1_3:58303572-58303591 | None:intergenic | 35.0% |
| !!! | GTTTTTGTTCTTGATGATGG+CGG | - | chr1_3:58303840-58303859 | Msa0128510:intron | 35.0% |
| TTATCTCGGAAAAACTGTTC+AGG | - | chr1_3:58304201-58304220 | Msa0128510:intron | 35.0% | |
| AGATGAAGTTTCTGAGTTGT+TGG | - | chr1_3:58304303-58304322 | Msa0128510:intron | 35.0% | |
| GATGAAGTTTCTGAGTTGTT+GGG | - | chr1_3:58304304-58304323 | Msa0128510:intron | 35.0% | |
| ! | GGGATTTTTGATGAAATAGG+TGG | - | chr1_3:58304324-58304343 | Msa0128510:three_prime_UTR | 35.0% |
| AATCCAGTTTCTGATTGCAT+CGG | + | chr1_3:58304362-58304381 | None:intergenic | 35.0% | |
| AATCAGAAACTGGATTGAGT+CGG | - | chr1_3:58304366-58304385 | Msa0128510:CDS | 35.0% | |
| GTAGTTAAAACGTGTACATG+GGG | + | chr1_3:58304680-58304699 | None:intergenic | 35.0% | |
| AAGTCATATCCCAGATGTAT+TGG | + | chr1_3:58305183-58305202 | None:intergenic | 35.0% | |
| GGATATGACTTTGATACTTC+AGG | - | chr1_3:58305192-58305211 | Msa0128510:intron | 35.0% | |
| GATACTTCAGGATACACTAT+TGG | - | chr1_3:58305204-58305223 | Msa0128510:intron | 35.0% | |
| AAAGATGACCGATACACTAA+AGG | - | chr1_3:58305336-58305355 | Msa0128510:intron | 35.0% | |
| GATACACTAAAGGAGAGAAA+AGG | - | chr1_3:58305346-58305365 | Msa0128510:intron | 35.0% | |
| TTTATGGATGTTTAGAAGGC+TGG | - | chr1_3:58305458-58305477 | Msa0128510:intron | 35.0% | |
| ! | TACGATCACTAGTTTCTCTT+TGG | - | chr1_3:58305674-58305693 | Msa0128510:intron | 35.0% |
| TACTCTCATTATTCCTTCTC+AGG | - | chr1_3:58305828-58305847 | Msa0128510:intron | 35.0% | |
| ACTCTCATTATTCCTTCTCA+GGG | - | chr1_3:58305829-58305848 | Msa0128510:intron | 35.0% | |
| AGGTATATTATTGCACCAGT+TGG | - | chr1_3:58306079-58306098 | Msa0128510:intron | 35.0% | |
| GTACTACAACCTAAAGACTT+TGG | + | chr1_3:58306147-58306166 | None:intergenic | 35.0% | |
| TTACCACAGTTACGAAATTC+AGG | - | chr1_3:58306251-58306270 | Msa0128510:intron | 35.0% | |
| !! | CTTTAAAGTCGCATAGACTT+GGG | + | chr1_3:58306355-58306374 | None:intergenic | 35.0% |
| !! | ACTTTAAAGTCGCATAGACT+TGG | + | chr1_3:58306356-58306375 | None:intergenic | 35.0% |
| !! | AGTCTATGCGACTTTAAAGT+TGG | - | chr1_3:58306356-58306375 | Msa0128510:intron | 35.0% |
| !!! | GTTCACTGCAGTGTTTTAAT+AGG | + | chr1_3:58306556-58306575 | None:intergenic | 35.0% |
| ACTGCAGTGAACTTTAGTAA+GGG | - | chr1_3:58306564-58306583 | Msa0128510:CDS | 35.0% | |
| ACTTTAGTAAGGGTAATGCT+AGG | - | chr1_3:58306574-58306593 | Msa0128510:CDS | 35.0% | |
| ACCAAGAAACCAAATTTCCT+CGG | + | chr1_3:58306649-58306668 | None:intergenic | 35.0% | |
| ATTGTGGTTGTTAAGACCAA+AGG | - | chr1_3:58306683-58306702 | Msa0128510:intron | 35.0% | |
| TTGTGGTTGTTAAGACCAAA+GGG | - | chr1_3:58306684-58306703 | Msa0128510:intron | 35.0% | |
| AAGCTACTTATGTGCTTATG+TGG | - | chr1_3:58306730-58306749 | Msa0128510:CDS | 35.0% | |
| TTTGACAACTTATGTGACAC+TGG | - | chr1_3:58306754-58306773 | Msa0128510:intron | 35.0% | |
| TTGCTTCTCCAATGAGATTA+TGG | - | chr1_3:58306785-58306804 | Msa0128510:intron | 35.0% | |
| TTGTCAGACCATAATCTCAT+TGG | + | chr1_3:58306796-58306815 | None:intergenic | 35.0% | |
| ! | ATCAAGCGACTCCTTTTTAA+AGG | - | chr1_3:58306815-58306834 | Msa0128510:intron | 35.0% |
| ACTGAAAACTTACTGGAACA+TGG | + | chr1_3:58307072-58307091 | None:intergenic | 35.0% | |
| AGGGGAATATGCCAAATATT+TGG | + | chr1_3:58307203-58307222 | None:intergenic | 35.0% | |
| TAAGCTGCTGTAAAATTGAG+TGG | + | chr1_3:58307343-58307362 | None:intergenic | 35.0% | |
| TACAGCAGCTTAACTTACTT+AGG | - | chr1_3:58307351-58307370 | Msa0128510:intron | 35.0% | |
| !! | GATAAACTCAAGTTGACAAC+GGG | + | chr1_3:58307638-58307657 | None:intergenic | 35.0% |
| ! | TAGCATAAGCACAAGTCTTT+TGG | - | chr1_3:58307688-58307707 | Msa0128510:intron | 35.0% |
| !!! | AAGCACAAGTCTTTTGGTTT+TGG | - | chr1_3:58307694-58307713 | Msa0128510:intron | 35.0% |
| !!! | AGCACAAGTCTTTTGGTTTT+GGG | - | chr1_3:58307695-58307714 | Msa0128510:intron | 35.0% |
| GTCATATGTTGGTCATACTT+GGG | - | chr1_3:58307875-58307894 | Msa0128510:intron | 35.0% | |
| TAGTACTAACAGATTCAGTG+AGG | + | chr1_3:58308062-58308081 | None:intergenic | 35.0% | |
| ATATTTATCCCAAGAACAGC+AGG | - | chr1_3:58308244-58308263 | Msa0128510:CDS | 35.0% | |
| ATTGATATCCTGCTGTTCTT+GGG | + | chr1_3:58308255-58308274 | None:intergenic | 35.0% | |
| TATTGATATCCTGCTGTTCT+TGG | + | chr1_3:58308256-58308275 | None:intergenic | 35.0% | |
| CTGCCGAATATCAACATATT+TGG | - | chr1_3:58308512-58308531 | Msa0128510:intron | 35.0% | |
| TTGGTTTCTTCTCATTATGC+AGG | - | chr1_3:58308769-58308788 | Msa0128510:intron | 35.0% | |
| AATATCTATGATCGAACAGC+TGG | - | chr1_3:58309030-58309049 | Msa0128510:intron | 35.0% | |
| TAGATAGCCAGTAACGTAAA+GGG | + | chr1_3:58309185-58309204 | None:intergenic | 35.0% | |
| ATTGTTCTCTCTGGCATATT+TGG | + | chr1_3:58309502-58309521 | None:intergenic | 35.0% | |
| AGAGAACAATGTTCCTTACT+TGG | - | chr1_3:58309512-58309531 | Msa0128510:intron | 35.0% | |
| GAGAACAATGTTCCTTACTT+GGG | - | chr1_3:58309513-58309532 | Msa0128510:intron | 35.0% | |
| AGAACAATGTTCCTTACTTG+GGG | - | chr1_3:58309514-58309533 | Msa0128510:intron | 35.0% | |
| !! | TACAACAGGATTTGGTGTTT+GGG | + | chr1_3:58309709-58309728 | None:intergenic | 35.0% |
| !! | TTACAACAGGATTTGGTGTT+TGG | + | chr1_3:58309710-58309729 | None:intergenic | 35.0% |
| TCTGGCATGAAAATTACAAC+AGG | + | chr1_3:58309723-58309742 | None:intergenic | 35.0% | |
| ! | TGTTGTAATTTTCATGCCAG+AGG | - | chr1_3:58309722-58309741 | Msa0128510:intron | 35.0% |
| GATAATGATTAGGGAAACTG+GGG | + | chr1_3:58309771-58309790 | None:intergenic | 35.0% | |
| GGATAATGATTAGGGAAACT+GGG | + | chr1_3:58309772-58309791 | None:intergenic | 35.0% | |
| AGGATAATGATTAGGGAAAC+TGG | + | chr1_3:58309773-58309792 | None:intergenic | 35.0% | |
| TAGCTACATCACATACAGTT+TGG | + | chr1_3:58309903-58309922 | None:intergenic | 35.0% | |
| CTGAATGACACATGTCAATA+AGG | - | chr1_3:58310095-58310114 | Msa0128510:intron | 35.0% | |
| ATGTGTGCAGAAACCTTAAA+CGG | + | chr1_3:58310219-58310238 | None:intergenic | 35.0% | |
| TCTTCCTTACTGTAGATAAG+GGG | - | chr1_3:58310500-58310519 | Msa0128510:intron | 35.0% | |
| ! | TTTTCACCTTTTGCTAGGAA+GGG | + | chr1_3:58310599-58310618 | None:intergenic | 35.0% |
| ! | TTTTTCACCTTTTGCTAGGA+AGG | + | chr1_3:58310600-58310619 | None:intergenic | 35.0% |
| ! | GGTCTTATATTTAGAGACAG+AGG | + | chr1_3:58310685-58310704 | None:intergenic | 35.0% |
| ATCTCTTGATTTACTCGATG+TGG | + | chr1_3:58310706-58310725 | None:intergenic | 35.0% | |
| ! | GAATGGAGTCTTATAAGAAG+GGG | - | chr1_3:58310888-58310907 | Msa0128510:intron | 35.0% |
| ! | TTTGGAACTGAGGTAGTATA+TGG | - | chr1_3:58310920-58310939 | Msa0128510:intron | 35.0% |
| TTCATCTGTTCCTAATTACC+AGG | - | chr1_3:58311120-58311139 | Msa0128510:intron | 35.0% | |
| AATTGCCATACCTGGTAATT+AGG | + | chr1_3:58311133-58311152 | None:intergenic | 35.0% | |
| AATTACCAGGTATGGCAATT+CGG | - | chr1_3:58311133-58311152 | Msa0128510:intron | 35.0% | |
| TGACATTGTTCAGGTAAATC+CGG | - | chr1_3:58311267-58311286 | Msa0128510:intron | 35.0% | |
| ! | GTATATTTTCCTGCTTGGAT+AGG | - | chr1_3:58311361-58311380 | Msa0128510:intron | 35.0% |
| GCACAAGAGAGAATTTCTTA+AGG | + | chr1_3:58311536-58311555 | None:intergenic | 35.0% | |
| CCTACATAATATGGATGACT+TGG | + | chr1_3:58311573-58311592 | None:intergenic | 35.0% | |
| CCAAGTCATCCATATTATGT+AGG | - | chr1_3:58311570-58311589 | Msa0128510:intron | 35.0% | |
| AATTGCACGCCTACATAATA+TGG | + | chr1_3:58311582-58311601 | None:intergenic | 35.0% | |
| TTCATCCCGAATTCAAATCT+CGG | - | chr1_3:58311601-58311620 | Msa0128510:intron | 35.0% | |
| !!! | AGACCATCTGCTTTGTTTTT+AGG | - | chr1_3:58311630-58311649 | Msa0128510:intron | 35.0% |
| GTACCTAAAAACAAAGCAGA+TGG | + | chr1_3:58311636-58311655 | None:intergenic | 35.0% | |
| TCTCACAGTATTAACACAGA+TGG | + | chr1_3:58311731-58311750 | None:intergenic | 35.0% | |
| CAATATGAGACCTACAGTAT+AGG | + | chr1_3:58311991-58312010 | None:intergenic | 35.0% | |
| CTATACTGTAGGTCTCATAT+TGG | - | chr1_3:58311989-58312008 | Msa0128510:CDS | 35.0% | |
| ATCACTAGCATTCATGAGAA+TGG | - | chr1_3:58312038-58312057 | Msa0128510:CDS | 35.0% | |
| CTGATTCATATCAGTCACAA+AGG | - | chr1_3:58312249-58312268 | Msa0128510:intron | 35.0% | |
| ! | ACTTCTGGTGATGAAATACA+TGG | + | chr1_3:58312294-58312313 | None:intergenic | 35.0% |
| TGCTAAAAGGTTGCAAATAC+TGG | - | chr1_3:58312360-58312379 | Msa0128510:CDS | 35.0% | |
| GTTGTAACTTTGTCAAGCTA+AGG | - | chr1_3:58312409-58312428 | Msa0128510:CDS | 35.0% | |
| ! | AGTGCTGAATTTATCAGCTA+AGG | + | chr1_3:58312448-58312467 | None:intergenic | 35.0% |
| CTGATAAATTCAGCACTTCT+TGG | - | chr1_3:58312451-58312470 | Msa0128510:intron | 35.0% | |
| CCATACTATTTAGCTAACTG+TGG | + | chr1_3:58312477-58312496 | None:intergenic | 35.0% | |
| CCACAGTTAGCTAAATAGTA+TGG | - | chr1_3:58312474-58312493 | Msa0128510:intron | 35.0% | |
| ATACAACTAAGGAAAAGGTC+TGG | + | chr1_3:58312500-58312519 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCGATCTTCATTGC+AGG | - | chr1_3:58312578-58312597 | Msa0128510:CDS | 35.0% |
| !!! | AAGGTTGATATTTTGGTGGG+AGG | + | chr1_3:58303497-58303516 | None:intergenic | 40.0% |
| !!! | GGGAAGGTTGATATTTTGGT+GGG | + | chr1_3:58303500-58303519 | None:intergenic | 40.0% |
| AAAATATCAACCTTCCCGCT+CGG | - | chr1_3:58303503-58303522 | Msa0128510:three_prime_UTR | 40.0% | |
| GTTTGTGTTTATATCCGAGC+GGG | + | chr1_3:58303520-58303539 | None:intergenic | 40.0% | |
| ATGAAGTACGTTCTCATCTC+CGG | - | chr1_3:58303582-58303601 | Msa0128510:three_prime_UTR | 40.0% | |
| !! | AGAGTGAGAACCGATTTTGA+TGG | + | chr1_3:58303691-58303710 | None:intergenic | 40.0% |
| AAACGGTGAATGATGCGAAA+CGG | + | chr1_3:58303742-58303761 | None:intergenic | 40.0% | |
| CCAGCGTCAATGTTCAAATA+CGG | + | chr1_3:58303792-58303811 | None:intergenic | 40.0% | |
| ! | ACCATGTCTCCTTTTGAACA+TGG | - | chr1_3:58303813-58303832 | Msa0128510:intron | 40.0% |
| TCCATGTTCAAAAGGAGACA+TGG | + | chr1_3:58303817-58303836 | None:intergenic | 40.0% | |
| TTCTTAGTCTGTGCTTGAGA+AGG | - | chr1_3:58304165-58304184 | Msa0128510:intron | 40.0% | |
| CAATCACACAAACATCAGCA+GGG | + | chr1_3:58304423-58304442 | None:intergenic | 40.0% | |
| TCAATCACACAAACATCAGC+AGG | + | chr1_3:58304424-58304443 | None:intergenic | 40.0% | |
| GATGTTTGTGTGATTGAGCT+TGG | - | chr1_3:58304427-58304446 | Msa0128510:intron | 40.0% | |
| ! | TGAGTCTATGCCGTTTATTG+AGG | - | chr1_3:58304572-58304591 | Msa0128510:intron | 40.0% |
| ACGGCAATTATCCTTTCAAG+TGG | - | chr1_3:58304599-58304618 | Msa0128510:intron | 40.0% | |
| ! | CGGCAATTATCCTTTCAAGT+GGG | - | chr1_3:58304600-58304619 | Msa0128510:intron | 40.0% |
| CATTGTTCTCATGTGTGATG+AGG | - | chr1_3:58304725-58304744 | Msa0128510:intron | 40.0% | |
| CTCGCACTTACCTAAGTATT+TGG | + | chr1_3:58304908-58304927 | None:intergenic | 40.0% | |
| CTAAAGGAGAGAAAAGGTTG+CGG | - | chr1_3:58305352-58305371 | Msa0128510:intron | 40.0% | |
| TAAAGGAGAGAAAAGGTTGC+GGG | - | chr1_3:58305353-58305372 | Msa0128510:intron | 40.0% | |
| GGACATTCACTTGGTCATAT+TGG | - | chr1_3:58305374-58305393 | Msa0128510:intron | 40.0% | |
| ! | TAGAAGGCTGGTGATGAAAT+TGG | - | chr1_3:58305470-58305489 | Msa0128510:intron | 40.0% |
| CGAGACAAGATGACATTTCA+TGG | + | chr1_3:58305794-58305813 | None:intergenic | 40.0% | |
| ATGGTTGCTCCAAAGTCTTT+AGG | - | chr1_3:58306135-58306154 | Msa0128510:intron | 40.0% | |
| CACTGCAGTGAACTTTAGTA+AGG | - | chr1_3:58306563-58306582 | Msa0128510:CDS | 40.0% | |
| TAGTAAGGGTAATGCTAGGA+TGG | - | chr1_3:58306578-58306597 | Msa0128510:CDS | 40.0% | |
| AGTAAGGGTAATGCTAGGAT+GGG | - | chr1_3:58306579-58306598 | Msa0128510:CDS | 40.0% | |
| GAAACCAAATTTCCTCGGTA+AGG | + | chr1_3:58306644-58306663 | None:intergenic | 40.0% | |
| ! | ACCGAGGAAATTTGGTTTCT+TGG | - | chr1_3:58306645-58306664 | Msa0128510:intron | 40.0% |
| TGTGGTTGTTAAGACCAAAG+GGG | - | chr1_3:58306685-58306704 | Msa0128510:intron | 40.0% | |
| AGACTCACTCTAAGTAACAG+GGG | + | chr1_3:58307221-58307240 | None:intergenic | 40.0% | |
| GAGACTCACTCTAAGTAACA+GGG | + | chr1_3:58307222-58307241 | None:intergenic | 40.0% | |
| AGAGACTCACTCTAAGTAAC+AGG | + | chr1_3:58307223-58307242 | None:intergenic | 40.0% | |
| AATAGAAGCCGGACATTAAG+AGG | + | chr1_3:58307301-58307320 | None:intergenic | 40.0% | |
| CTGCTGTAAAATTGAGTGGT+GGG | + | chr1_3:58307339-58307358 | None:intergenic | 40.0% | |
| TCAACGCACTCTTCATTGTT+GGG | + | chr1_3:58307552-58307571 | None:intergenic | 40.0% | |
| ATCAACGCACTCTTCATTGT+TGG | + | chr1_3:58307553-58307572 | None:intergenic | 40.0% | |
| !!! | GCACAAGTCTTTTGGTTTTG+GGG | - | chr1_3:58307696-58307715 | Msa0128510:CDS | 40.0% |
| CGTCATATGTTGGTCATACT+TGG | - | chr1_3:58307874-58307893 | Msa0128510:intron | 40.0% | |
| TATGTTGGTCATACTTGGGA+AGG | - | chr1_3:58307879-58307898 | Msa0128510:intron | 40.0% | |
| TTTACAGGTTAGGATTGCCA+TGG | - | chr1_3:58308154-58308173 | Msa0128510:intron | 40.0% | |
| ! | ACCAACATATTTTCCCACCA+TGG | + | chr1_3:58308174-58308193 | None:intergenic | 40.0% |
| CATTGAGACCATCAATTGAC+TGG | - | chr1_3:58308673-58308692 | Msa0128510:intron | 40.0% | |
| ATTGTGCACTGTCATCTTCA+AGG | + | chr1_3:58308713-58308732 | None:intergenic | 40.0% | |
| ! | TCTATCTAGGAAGTTTGGTG+AGG | - | chr1_3:58308920-58308939 | Msa0128510:intron | 40.0% |
| AAAAACCGTCTAGCACATAG+CGG | + | chr1_3:58308970-58308989 | None:intergenic | 40.0% | |
| CTAGATAGCCAGTAACGTAA+AGG | + | chr1_3:58309186-58309205 | None:intergenic | 40.0% | |
| ! | CTTATTGGCCTAATAATGGG+TGG | - | chr1_3:58309214-58309233 | Msa0128510:CDS | 40.0% |
| CCATAAGACCACCCATTATT+AGG | + | chr1_3:58309225-58309244 | None:intergenic | 40.0% | |
| !! | CCTAATAATGGGTGGTCTTA+TGG | - | chr1_3:58309222-58309241 | Msa0128510:CDS | 40.0% |
| CCAATATTGTGAGATTGAGC+AGG | + | chr1_3:58309295-58309314 | None:intergenic | 40.0% | |
| CCTGCTCAATCTCACAATAT+TGG | - | chr1_3:58309292-58309311 | Msa0128510:intron | 40.0% | |
| GTAAGGAACATTGTTCTCTC+TGG | + | chr1_3:58309511-58309530 | None:intergenic | 40.0% | |
| !!! | TCTATTCTTAGGTTTTGGGC+TGG | - | chr1_3:58309655-58309674 | Msa0128510:intron | 40.0% |
| !!! | CTATTCTTAGGTTTTGGGCT+GGG | - | chr1_3:58309656-58309675 | Msa0128510:intron | 40.0% |
| ATGCCTGCTAGTCATAAACA+GGG | - | chr1_3:58309800-58309819 | Msa0128510:intron | 40.0% | |
| CTAGTCATAAACAGGGTTCT+AGG | - | chr1_3:58309807-58309826 | Msa0128510:intron | 40.0% | |
| CACATGTCAATAAGGATGTC+TGG | - | chr1_3:58310103-58310122 | Msa0128510:intron | 40.0% | |
| !!! | AAACGGCACTCGTTTTGAAA+CGG | + | chr1_3:58310202-58310221 | None:intergenic | 40.0% |
| !! | TTCAAAACGAGTGCCGTTTA+AGG | - | chr1_3:58310203-58310222 | Msa0128510:intron | 40.0% |
| GAAACCCCTTATCTACAGTA+AGG | + | chr1_3:58310507-58310526 | None:intergenic | 40.0% | |
| ACTGTAGATAAGGGGTTTCA+AGG | - | chr1_3:58310508-58310527 | Msa0128510:intron | 40.0% | |
| CTGTAGATAAGGGGTTTCAA+GGG | - | chr1_3:58310509-58310528 | Msa0128510:intron | 40.0% | |
| TGTTGAGAAGTTTACCCTTC+AGG | - | chr1_3:58310754-58310773 | Msa0128510:intron | 40.0% | |
| CTGTTCCTAATTACCAGGTA+TGG | - | chr1_3:58311125-58311144 | Msa0128510:intron | 40.0% | |
| ATTCGGAGTATGTGGATGAA+CGG | - | chr1_3:58311150-58311169 | Msa0128510:intron | 40.0% | |
| CAGGTACTACACATGTTTGT+AGG | + | chr1_3:58311231-58311250 | None:intergenic | 40.0% | |
| GAAGCTGGGCTAAAATTTGT+TGG | - | chr1_3:58311310-58311329 | Msa0128510:intron | 40.0% | |
| !! | TGGGCTAAAATTTGTTGGCA+GGG | - | chr1_3:58311315-58311334 | Msa0128510:intron | 40.0% |
| !! | TGGAGGTATATTTTCCTGCT+TGG | - | chr1_3:58311356-58311375 | Msa0128510:intron | 40.0% |
| TATCAAAACCCTATCCAAGC+AGG | + | chr1_3:58311373-58311392 | None:intergenic | 40.0% | |
| ! | CAGGTTTTCAACTACAGTTC+TGG | + | chr1_3:58311400-58311419 | None:intergenic | 40.0% |
| CAGAACTGTAGTTGAAAACC+TGG | - | chr1_3:58311398-58311417 | Msa0128510:intron | 40.0% | |
| AACTGTAGTTGAAAACCTGG+CGG | - | chr1_3:58311401-58311420 | Msa0128510:intron | 40.0% | |
| TGAGATGAAGATGGTCTGTT+TGG | - | chr1_3:58311746-58311765 | Msa0128510:intron | 40.0% | |
| GCAAGCAATAACATGACATC+AGG | + | chr1_3:58311804-58311823 | None:intergenic | 40.0% | |
| ATTCACATGGGAATTTCGGT+AGG | + | chr1_3:58311840-58311859 | None:intergenic | 40.0% | |
| AGGGAAAATAATTGGGAGCA+AGG | - | chr1_3:58312132-58312151 | Msa0128510:intron | 40.0% | |
| GGGAAAATAATTGGGAGCAA+GGG | - | chr1_3:58312133-58312152 | Msa0128510:intron | 40.0% | |
| AATAATTGGGAGCAAGGGAA+TGG | - | chr1_3:58312138-58312157 | Msa0128510:intron | 40.0% | |
| ATAATTGGGAGCAAGGGAAT+GGG | - | chr1_3:58312139-58312158 | Msa0128510:intron | 40.0% | |
| TAGGAACTAGGAACTGAAGT+AGG | - | chr1_3:58312165-58312184 | Msa0128510:intron | 40.0% | |
| GTAACTTTGTCAAGCTAAGG+AGG | - | chr1_3:58312412-58312431 | Msa0128510:CDS | 40.0% | |
| CACAGCAAGCTATACAACTA+AGG | + | chr1_3:58312511-58312530 | None:intergenic | 40.0% | |
| !! | CTTAGTTGTATAGCTTGCTG+TGG | - | chr1_3:58312509-58312528 | Msa0128510:intron | 40.0% |
| ATGTGTATAGAGGTCTGAAG+CGG | - | chr1_3:58312628-58312647 | Msa0128510:intron | 40.0% | |
| TTTATAAGCCTGTGAGTGTC+AGG | + | chr1_3:58312718-58312737 | None:intergenic | 40.0% | |
| !!! | CGGGAAGGTTGATATTTTGG+TGG | + | chr1_3:58303501-58303520 | None:intergenic | 45.0% |
| !!! | GAGCGGGAAGGTTGATATTT+TGG | + | chr1_3:58303504-58303523 | None:intergenic | 45.0% |
| !! | GTGAGAACCGATTTTGATGG+AGG | + | chr1_3:58303688-58303707 | None:intergenic | 45.0% |
| CGGTTACGAAGAAGTTGAGT+TGG | + | chr1_3:58303722-58303741 | None:intergenic | 45.0% | |
| CCGTATTTGAACATTGACGC+TGG | - | chr1_3:58303789-58303808 | Msa0128510:three_prime_UTR | 45.0% | |
| ! | CTGATTGCATCGGTGATATG+CGG | + | chr1_3:58304352-58304371 | None:intergenic | 45.0% |
| TCACCGATGCAATCAGAAAC+TGG | - | chr1_3:58304356-58304375 | Msa0128510:exon | 45.0% | |
| GGTCTTCATTTCCATCAACC+GGG | + | chr1_3:58304402-58304421 | None:intergenic | 45.0% | |
| GGGTCTTCATTTCCATCAAC+CGG | + | chr1_3:58304403-58304422 | None:intergenic | 45.0% | |
| GTTTGTGTGATTGAGCTTGG+AGG | - | chr1_3:58304430-58304449 | Msa0128510:intron | 45.0% | |
| ! | TGCCGTTTATTGAGGCTCTA+CGG | - | chr1_3:58304580-58304599 | Msa0128510:intron | 45.0% |
| TGCCGTAGAGCCTCAATAAA+CGG | + | chr1_3:58304585-58304604 | None:intergenic | 45.0% | |
| TGCTGTCATACCCACTTGAA+AGG | + | chr1_3:58304613-58304632 | None:intergenic | 45.0% | |
| CTTTCCTCGACAACAGTCAA+AGG | + | chr1_3:58305320-58305339 | None:intergenic | 45.0% | |
| TGGATGAGACAGAAGTTGTC+AGG | + | chr1_3:58305855-58305874 | None:intergenic | 45.0% | |
| ACACTGGTATCAGGCTAACA+TGG | + | chr1_3:58305875-58305894 | None:intergenic | 45.0% | |
| ! | TGTTAGCCTGATACCAGTGT+TGG | - | chr1_3:58305875-58305894 | Msa0128510:intron | 45.0% |
| ! | GTTAGCCTGATACCAGTGTT+GGG | - | chr1_3:58305876-58305895 | Msa0128510:intron | 45.0% |
| ! | ATACCAGTGTTGGGTGTAGT+GGG | - | chr1_3:58305885-58305904 | Msa0128510:intron | 45.0% |
| !!! | GTTGTGTCGGCTTTGTTTTC+TGG | + | chr1_3:58305996-58306015 | None:intergenic | 45.0% |
| ! | TGTCAGGGAACTAAGAGCAT+TGG | - | chr1_3:58306020-58306039 | Msa0128510:intron | 45.0% |
| !! | GTCAGGGAACTAAGAGCATT+GGG | - | chr1_3:58306021-58306040 | Msa0128510:intron | 45.0% |
| !! | GAGCGACTTGCTAAAAGATG+AGG | + | chr1_3:58306054-58306073 | None:intergenic | 45.0% |
| AAATGCATCTAGGCACCAAC+TGG | + | chr1_3:58306097-58306116 | None:intergenic | 45.0% | |
| GAGCCTGAATTTCGTAACTG+TGG | + | chr1_3:58306257-58306276 | None:intergenic | 45.0% | |
| GCTGCTGTAAAATTGAGTGG+TGG | + | chr1_3:58307340-58307359 | None:intergenic | 45.0% | |
| !! | TTTGCGGCAATGGACTGATA+TGG | - | chr1_3:58308020-58308039 | Msa0128510:intron | 45.0% |
| ! | GCCATGGTGGGAAAATATGT+TGG | - | chr1_3:58308170-58308189 | Msa0128510:intron | 45.0% |
| TGCAACACAAGCATGCAGTA+GGG | + | chr1_3:58308649-58308668 | None:intergenic | 45.0% | |
| GCTGCAATCCAGTCAATTGA+TGG | + | chr1_3:58308684-58308703 | None:intergenic | 45.0% | |
| TTCTCATTATGCAGGCAGTC+AGG | - | chr1_3:58308777-58308796 | Msa0128510:intron | 45.0% | |
| AAAACCGTCTAGCACATAGC+GGG | + | chr1_3:58308969-58308988 | None:intergenic | 45.0% | |
| ! | GCTATGTGCTAGACGGTTTT+TGG | - | chr1_3:58308969-58308988 | Msa0128510:intron | 45.0% |
| ACACACACCCTTTACGTTAC+TGG | - | chr1_3:58309175-58309194 | Msa0128510:intron | 45.0% | |
| TCATGTGGAGAGATCCACAT+TGG | + | chr1_3:58309335-58309354 | None:intergenic | 45.0% | |
| ! | TCCTTACTTGGGGATTTGCT+TGG | - | chr1_3:58309524-58309543 | Msa0128510:intron | 45.0% |
| ! | CCTTACTTGGGGATTTGCTT+GGG | - | chr1_3:58309525-58309544 | Msa0128510:intron | 45.0% |
| GAAACAAGTATGCGTACCTC+TGG | + | chr1_3:58309741-58309760 | None:intergenic | 45.0% | |
| AATGATTAGGGAAACTGGGG+AGG | + | chr1_3:58309768-58309787 | None:intergenic | 45.0% | |
| GATGCCTGCTAGTCATAAAC+AGG | - | chr1_3:58309799-58309818 | Msa0128510:intron | 45.0% | |
| GAACCCTGTTTATGACTAGC+AGG | + | chr1_3:58309806-58309825 | None:intergenic | 45.0% | |
| !! | ATGGGAAGTACCATGAGACT+TGG | - | chr1_3:58309836-58309855 | Msa0128510:intron | 45.0% |
| TCTTCGAGATCCAAGTCTCA+TGG | + | chr1_3:58309849-58309868 | None:intergenic | 45.0% | |
| GTCATTCAGAACAACCAGAC+AGG | + | chr1_3:58310084-58310103 | None:intergenic | 45.0% | |
| AGATAAGGGGTTTCAAGGGA+AGG | - | chr1_3:58310513-58310532 | Msa0128510:intron | 45.0% | |
| GATAAGGGGTTTCAAGGGAA+GGG | - | chr1_3:58310514-58310533 | Msa0128510:intron | 45.0% | |
| GGTTTCAAGGGAAGGGAAAT+GGG | - | chr1_3:58310521-58310540 | Msa0128510:CDS | 45.0% | |
| GAAGGGAAATGGGAAAGGTT+TGG | - | chr1_3:58310531-58310550 | Msa0128510:CDS | 45.0% | |
| ! | ACCTTTTGCTAGGAAGGGAA+GGG | + | chr1_3:58310594-58310613 | None:intergenic | 45.0% |
| ATACTCCGAATTGCCATACC+TGG | + | chr1_3:58311141-58311160 | None:intergenic | 45.0% | |
| GTATGGCAATTCGGAGTATG+TGG | - | chr1_3:58311142-58311161 | Msa0128510:intron | 45.0% | |
| !! | CTGGGCTAAAATTTGTTGGC+AGG | - | chr1_3:58311314-58311333 | Msa0128510:intron | 45.0% |
| TTTGTTGGCAGGGATGAAAG+CGG | - | chr1_3:58311325-58311344 | Msa0128510:intron | 45.0% | |
| CATGTCTAATTGAAACCGCC+AGG | + | chr1_3:58311419-58311438 | None:intergenic | 45.0% | |
| CTGGCGGTTTCAATTAGACA+TGG | - | chr1_3:58311417-58311436 | Msa0128510:intron | 45.0% | |
| !! | CAACAACAAGAGTGCTGTGA+AGG | + | chr1_3:58311773-58311792 | None:intergenic | 45.0% |
| TGATGCTGCACCTATACTGT+AGG | - | chr1_3:58311978-58311997 | Msa0128510:CDS | 45.0% | |
| AGGTCTCATATTGGCAGCAA+CGG | - | chr1_3:58311998-58312017 | Msa0128510:CDS | 45.0% | |
| GAACTAGGAACTGAAGTAGG+AGG | - | chr1_3:58312168-58312187 | Msa0128510:intron | 45.0% | |
| AGGAACTGAAGTAGGAGGAA+TGG | - | chr1_3:58312173-58312192 | Msa0128510:intron | 45.0% | |
| GGAACTGAAGTAGGAGGAAT+GGG | - | chr1_3:58312174-58312193 | Msa0128510:intron | 45.0% | |
| ! | ATCCAACCTAGAGAAGCATG+GGG | + | chr1_3:58312229-58312248 | None:intergenic | 45.0% |
| ! | GATCCAACCTAGAGAAGCAT+GGG | + | chr1_3:58312230-58312249 | None:intergenic | 45.0% |
| AGATCCAACCTAGAGAAGCA+TGG | + | chr1_3:58312231-58312250 | None:intergenic | 45.0% | |
| ACCATTAACCTGACACTCAC+AGG | - | chr1_3:58312707-58312726 | Msa0128510:intron | 45.0% | |
| !!! | AAAATAATTTCTAAAAAAAT+AGG | + | chr1_3:58305145-58305164 | None:intergenic | 5.0% |
| !!! | TATATTTTTCAATAAAAATA+TGG | + | chr1_3:58307934-58307953 | None:intergenic | 5.0% |
| !! | TTGAAAAATATATTAATAAT+TGG | - | chr1_3:58307942-58307961 | Msa0128510:intron | 5.0% |
| !!! | TTTCTAAAAAAATTAAAAAA+AGG | - | chr1_3:58308550-58308569 | Msa0128510:intron | 5.0% |
| !!! | TTCTAAAAAAATTAAAAAAA+GGG | - | chr1_3:58308551-58308570 | Msa0128510:intron | 5.0% |
| GTGTTTATATCCGAGCGGGA+AGG | + | chr1_3:58303516-58303535 | None:intergenic | 50.0% | |
| AAGTACGTTCTCATCTCCGG+CGG | - | chr1_3:58303585-58303604 | Msa0128510:three_prime_UTR | 50.0% | |
| !! | CGATTTTGATGGAGGTGACG+CGG | + | chr1_3:58303680-58303699 | None:intergenic | 50.0% |
| CGCGTCACCTCCATCAAAAT+CGG | - | chr1_3:58303678-58303697 | Msa0128510:three_prime_UTR | 50.0% | |
| !! | TGTTCTTGATGATGGCGGAG+AGG | - | chr1_3:58303845-58303864 | Msa0128510:intron | 50.0% |
| GAGCGCAAGGGAGATTATCT+CGG | - | chr1_3:58304187-58304206 | Msa0128510:intron | 50.0% | |
| !! | ATTGAGCTTGGAGGCACTGT+GGG | - | chr1_3:58304439-58304458 | Msa0128510:intron | 50.0% |
| CCTCGACAACAGTCAAAGGA+TGG | + | chr1_3:58305316-58305335 | None:intergenic | 50.0% | |
| CCATCCTTTGACTGTTGTCG+AGG | - | chr1_3:58305313-58305332 | Msa0128510:intron | 50.0% | |
| AAGGTTGCGGGACATTCACT+TGG | - | chr1_3:58305365-58305384 | Msa0128510:intron | 50.0% | |
| CTACACCCAACACTGGTATC+AGG | + | chr1_3:58305884-58305903 | None:intergenic | 50.0% | |
| ! | GATACCAGTGTTGGGTGTAG+TGG | - | chr1_3:58305884-58305903 | Msa0128510:intron | 50.0% |
| ! | TACCAGTGTTGGGTGTAGTG+GGG | - | chr1_3:58305886-58305905 | Msa0128510:intron | 50.0% |
| TCCCTGACACTGTGTTGTGT+CGG | + | chr1_3:58306009-58306028 | None:intergenic | 50.0% | |
| TTTAGCAAGTCGCTCTGCTG+AGG | - | chr1_3:58306059-58306078 | Msa0128510:intron | 50.0% | |
| TGTGATATTGGGCCTTACCG+AGG | - | chr1_3:58306629-58306648 | Msa0128510:intron | 50.0% | |
| TGGGCCTTACCGAGGAAATT+TGG | - | chr1_3:58306637-58306656 | Msa0128510:intron | 50.0% | |
| ATTCAATGTGCAGCCTCTGC+TGG | - | chr1_3:58307015-58307034 | Msa0128510:intron | 50.0% | |
| TCCTTGGTACTTTCCAGCAG+AGG | + | chr1_3:58307031-58307050 | None:intergenic | 50.0% | |
| AAGTTGACAACGGGATGCAG+GGG | + | chr1_3:58307629-58307648 | None:intergenic | 50.0% | |
| ! | CAAGTTGACAACGGGATGCA+GGG | + | chr1_3:58307630-58307649 | None:intergenic | 50.0% |
| !! | TCAAGTTGACAACGGGATGC+AGG | + | chr1_3:58307631-58307650 | None:intergenic | 50.0% |
| CATACTTGGGAAGGTTCTGC+TGG | - | chr1_3:58307888-58307907 | Msa0128510:intron | 50.0% | |
| ! | GCAAATCAGGAGGTGTAGCA+CGG | + | chr1_3:58308005-58308024 | None:intergenic | 50.0% |
| ! | GTGCTACACCTCCTGATTTG+CGG | - | chr1_3:58308004-58308023 | Msa0128510:intron | 50.0% |
| TCAGTCCATTGCCGCAAATC+AGG | + | chr1_3:58308018-58308037 | None:intergenic | 50.0% | |
| ACAGGTTAGGATTGCCATGG+TGG | - | chr1_3:58308157-58308176 | Msa0128510:intron | 50.0% | |
| CAGGTTAGGATTGCCATGGT+GGG | - | chr1_3:58308158-58308177 | Msa0128510:intron | 50.0% | |
| GTGCAACACAAGCATGCAGT+AGG | + | chr1_3:58308650-58308669 | None:intergenic | 50.0% | |
| CTTCAGAGTCTTCCATGCTG+CGG | + | chr1_3:58308855-58308874 | None:intergenic | 50.0% | |
| TGATCCCGCTATGTGCTAGA+CGG | - | chr1_3:58308962-58308981 | Msa0128510:intron | 50.0% | |
| GTCTTGGTTCCAGGAGGATT+TGG | - | chr1_3:58309444-58309463 | Msa0128510:intron | 50.0% | |
| TTTGGAGATCGTGGTGTGAG+AGG | - | chr1_3:58309462-58309481 | Msa0128510:intron | 50.0% | |
| CCCAAGCAAATCCCCAAGTA+AGG | + | chr1_3:58309528-58309547 | None:intergenic | 50.0% | |
| ATTAGGGAAACTGGGGAGGA+GGG | + | chr1_3:58309764-58309783 | None:intergenic | 50.0% | |
| GACTAGCAGGCATCACAACA+AGG | + | chr1_3:58309793-58309812 | None:intergenic | 50.0% | |
| !! | ACAGGGTTCTAGGACTCACA+TGG | - | chr1_3:58309817-58309836 | Msa0128510:intron | 50.0% |
| !! | CAGGGTTCTAGGACTCACAT+GGG | - | chr1_3:58309818-58309837 | Msa0128510:intron | 50.0% |
| ! | TTTCTTGTTCTGGGCCTGTC+TGG | - | chr1_3:58310067-58310086 | Msa0128510:intron | 50.0% |
| ATGTCTGGTCGTTGACCATC+AGG | - | chr1_3:58310118-58310137 | Msa0128510:intron | 50.0% | |
| TGTCTGGTCGTTGACCATCA+GGG | - | chr1_3:58310119-58310138 | Msa0128510:intron | 50.0% | |
| !!! | GGCACTCGTTTTGAAACGGA+GGG | + | chr1_3:58310198-58310217 | None:intergenic | 50.0% |
| GGGTTTCAAGGGAAGGGAAA+TGG | - | chr1_3:58310520-58310539 | Msa0128510:CDS | 50.0% | |
| CAAGGGAAGGGAAATGGGAA+AGG | - | chr1_3:58310526-58310545 | Msa0128510:CDS | 50.0% | |
| GGGATGTAGGTTTGGACAGT+CGG | + | chr1_3:58310570-58310589 | None:intergenic | 50.0% | |
| ! | TTTTGCTAGGAAGGGAAGGG+GGG | + | chr1_3:58310591-58310610 | None:intergenic | 50.0% |
| ! | CTTTTGCTAGGAAGGGAAGG+GGG | + | chr1_3:58310592-58310611 | None:intergenic | 50.0% |
| ! | CCTTTTGCTAGGAAGGGAAG+GGG | + | chr1_3:58310593-58310612 | None:intergenic | 50.0% |
| ! | CACCTTTTGCTAGGAAGGGA+AGG | + | chr1_3:58310595-58310614 | None:intergenic | 50.0% |
| ACGGCATCGTCATAGATACG+AGG | - | chr1_3:58311169-58311188 | Msa0128510:intron | 50.0% | |
| GGATGAAAGCGGAAGACGAA+TGG | - | chr1_3:58311336-58311355 | Msa0128510:intron | 50.0% | |
| TGAAAGCGGAAGACGAATGG+AGG | - | chr1_3:58311339-58311358 | Msa0128510:intron | 50.0% | |
| CCAGGCCGAGATTTGAATTC+GGG | + | chr1_3:58311609-58311628 | None:intergenic | 50.0% | |
| CCCAGGCCGAGATTTGAATT+CGG | + | chr1_3:58311610-58311629 | None:intergenic | 50.0% | |
| CCGAATTCAAATCTCGGCCT+GGG | - | chr1_3:58311607-58311626 | Msa0128510:intron | 50.0% | |
| AACAAAGCAGATGGTCTCCC+AGG | + | chr1_3:58311627-58311646 | None:intergenic | 50.0% | |
| CAGATGGTGTAAACGGCTCT+TGG | + | chr1_3:58311715-58311734 | None:intergenic | 50.0% | |
| GGTCTCATATTGGCAGCAAC+GGG | - | chr1_3:58311999-58312018 | Msa0128510:CDS | 50.0% | |
| GTCTCATATTGGCAGCAACG+GGG | - | chr1_3:58312000-58312019 | Msa0128510:CDS | 50.0% | |
| GAGGAATGGGAATCCTGAAG+TGG | - | chr1_3:58312187-58312206 | Msa0128510:intron | 50.0% | |
| TACCCCATGCTTCTCTAGGT+TGG | - | chr1_3:58312224-58312243 | Msa0128510:CDS | 50.0% | |
| GCCTGTGAGTGTCAGGTTAA+TGG | + | chr1_3:58312711-58312730 | None:intergenic | 50.0% | |
| ! | AAAAGGAGCACGCACGTTTG+GGG | + | chr1_3:58312787-58312806 | None:intergenic | 50.0% |
| ! | GAAAAGGAGCACGCACGTTT+GGG | + | chr1_3:58312788-58312807 | None:intergenic | 50.0% |
| ! | AGAAAAGGAGCACGCACGTT+TGG | + | chr1_3:58312789-58312808 | None:intergenic | 50.0% |
| ! | TTTTGATGGAGGTGACGCGG+AGG | + | chr1_3:58303677-58303696 | None:intergenic | 55.0% |
| ! | TGTGCTTGAGAAGGAGCGCA+AGG | - | chr1_3:58304174-58304193 | Msa0128510:intron | 55.0% |
| ! | GTGCTTGAGAAGGAGCGCAA+GGG | - | chr1_3:58304175-58304194 | Msa0128510:intron | 55.0% |
| TGAGTCGGTTGCTGTGATCC+CGG | - | chr1_3:58304381-58304400 | Msa0128510:CDS | 55.0% | |
| GTTGCTGTGATCCCGGTTGA+TGG | - | chr1_3:58304388-58304407 | Msa0128510:CDS | 55.0% | |
| !! | GATTGAGCTTGGAGGCACTG+TGG | - | chr1_3:58304438-58304457 | Msa0128510:intron | 55.0% |
| GAAGTTGTCAGGCCCTGAGA+AGG | + | chr1_3:58305844-58305863 | None:intergenic | 55.0% | |
| ! | ACCAGTGTTGGGTGTAGTGG+GGG | - | chr1_3:58305887-58305906 | Msa0128510:intron | 55.0% |
| AGCCGACACAACACAGTGTC+AGG | - | chr1_3:58306004-58306023 | Msa0128510:intron | 55.0% | |
| GCCGACACAACACAGTGTCA+GGG | - | chr1_3:58306005-58306024 | Msa0128510:intron | 55.0% | |
| GCACTCAGCTTCAACCCCTT+TGG | + | chr1_3:58306702-58306721 | None:intergenic | 55.0% | |
| !! | GCCTCTGCTGGAAAGTACCA+AGG | - | chr1_3:58307027-58307046 | Msa0128510:intron | 55.0% |
| GAGGTGTAGCACGGCTGAAA+AGG | + | chr1_3:58307996-58308015 | None:intergenic | 55.0% | |
| ! | CACCTCCTGATTTGCGGCAA+TGG | - | chr1_3:58308010-58308029 | Msa0128510:intron | 55.0% |
| GTCCATTGCCGCAAATCAGG+AGG | + | chr1_3:58308015-58308034 | None:intergenic | 55.0% | |
| CGCAGCATGGAAGACTCTGA+AGG | - | chr1_3:58308853-58308872 | Msa0128510:intron | 55.0% | |
| GCAGAGTGCAGCTTGTGTCT+TGG | - | chr1_3:58309428-58309447 | Msa0128510:intron | 55.0% | |
| GCAGCTTGTGTCTTGGTTCC+AGG | - | chr1_3:58309435-58309454 | Msa0128510:intron | 55.0% | |
| GCTTGTGTCTTGGTTCCAGG+AGG | - | chr1_3:58309438-58309457 | Msa0128510:intron | 55.0% | |
| CCACGATCTCCAAATCCTCC+TGG | + | chr1_3:58309456-58309475 | None:intergenic | 55.0% | |
| CCAGGAGGATTTGGAGATCG+TGG | - | chr1_3:58309453-58309472 | Msa0128510:intron | 55.0% | |
| TTAGGGAAACTGGGGAGGAG+GGG | + | chr1_3:58309763-58309782 | None:intergenic | 55.0% | |
| GATTAGGGAAACTGGGGAGG+AGG | + | chr1_3:58309765-58309784 | None:intergenic | 55.0% | |
| !!! | CGGCACTCGTTTTGAAACGG+AGG | + | chr1_3:58310199-58310218 | None:intergenic | 55.0% |
| TTTGCTAGGAAGGGAAGGGG+GGG | + | chr1_3:58310590-58310609 | None:intergenic | 55.0% | |
| CCCCTTCCCTTCCTAGCAAA+AGG | - | chr1_3:58310590-58310609 | Msa0128510:intron | 55.0% | |
| ATGGAGGACACATCACACGC+TGG | + | chr1_3:58310986-58311005 | None:intergenic | 55.0% | |
| CCCGAATTCAAATCTCGGCC+TGG | - | chr1_3:58311606-58311625 | Msa0128510:intron | 55.0% | |
| ATTGGCAGCAACGGGGAAGT+TGG | - | chr1_3:58312007-58312026 | Msa0128510:CDS | 55.0% | |
| ATTGGGAGCAAGGGAATGGG+AGG | - | chr1_3:58312142-58312161 | Msa0128510:intron | 55.0% | |
| GGGAATGGGAGGTAGGAACT+AGG | - | chr1_3:58312153-58312172 | Msa0128510:intron | 55.0% | |
| CTGCACGCATACTCCACTTC+AGG | + | chr1_3:58312203-58312222 | None:intergenic | 55.0% | |
| CAGCTACCCCATGCTTCTCT+AGG | - | chr1_3:58312220-58312239 | Msa0128510:CDS | 55.0% | |
| GGGGCATGGTGAACTGAACA+AGG | + | chr1_3:58312768-58312787 | None:intergenic | 55.0% | |
| ATCTCCGGCGGAGTCGTTAG+CGG | - | chr1_3:58303597-58303616 | Msa0128510:three_prime_UTR | 60.0% | |
| TCCCCCACTACACCCAACAC+TGG | + | chr1_3:58305891-58305910 | None:intergenic | 60.0% | |
| AACGGGATGCAGGGGACAGT+TGG | + | chr1_3:58307621-58307640 | None:intergenic | 60.0% | |
| CATGCTGCGGCATGTGCTTC+TGG | + | chr1_3:58308842-58308861 | None:intergenic | 60.0% | |
| ! | CAGAAGCACATGCCGCAGCA+TGG | - | chr1_3:58308840-58308859 | Msa0128510:intron | 60.0% |
| GGAAGGGGGGGATGTAGGTT+TGG | + | chr1_3:58310578-58310597 | None:intergenic | 60.0% | |
| GGAGCAAGGGAATGGGAGGT+AGG | - | chr1_3:58312146-58312165 | Msa0128510:intron | 60.0% | |
| GTCGTTAGCGGCCTCGGCAA+AGG | - | chr1_3:58303609-58303628 | Msa0128510:three_prime_UTR | 65.0% | |
| GGCGTCGTCCTCAAAGCCTG+CGG | - | chr1_3:58303651-58303670 | Msa0128510:three_prime_UTR | 65.0% | |
| GGAAGGGAAGGGGGGGATGT+AGG | + | chr1_3:58310583-58310602 | None:intergenic | 65.0% | |
| ! | GAGCACGCACGTTTGGGGCA+TGG | + | chr1_3:58312782-58312801 | None:intergenic | 65.0% |
| GAGGCCGCTAACGACTCCGC+CGG | + | chr1_3:58303604-58303623 | None:intergenic | 70.0% | |
| GGCGGAGTCGTTAGCGGCCT+CGG | - | chr1_3:58303603-58303622 | Msa0128510:three_prime_UTR | 70.0% | |
| TGGCGGTGACGCCTTTGCCG+AGG | + | chr1_3:58303623-58303642 | None:intergenic | 70.0% | |
| GGCGTCACCGCCAGCAGCAT+CGG | - | chr1_3:58303630-58303649 | Msa0128510:three_prime_UTR | 70.0% | |
| GACGACGCCGATGCTGCTGG+CGG | + | chr1_3:58303640-58303659 | None:intergenic | 70.0% | |
| GAGGACGACGCCGATGCTGC+TGG | + | chr1_3:58303643-58303662 | None:intergenic | 70.0% | |
| CGCGGAGGCCGCAGGCTTTG+AGG | + | chr1_3:58303662-58303681 | None:intergenic | 75.0% | |
| ! | GGAGGTGACGCGGAGGCCGC+AGG | + | chr1_3:58303670-58303689 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 58303431 | 58312999 | 58303431 | ID=Msa0128510;Name=Msa0128510 |
| chr1_3 | mRNA | 58303431 | 58312999 | 58303431 | ID=Msa0128510-mRNA-1;Parent=Msa0128510;Name=Msa0128510-mRNA-1;_AED=0.18;_eAED=0.18;_QI=151|1|1|1|0.95|0.91|23|447|562 |
| chr1_3 | exon | 58303431 | 58303830 | 58303431 | ID=Msa0128510-mRNA-1:exon:18767;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58304316 | 58304430 | 58304316 | ID=Msa0128510-mRNA-1:exon:18766;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58304779 | 58304872 | 58304779 | ID=Msa0128510-mRNA-1:exon:18765;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58305070 | 58305150 | 58305070 | ID=Msa0128510-mRNA-1:exon:18764;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58305240 | 58305288 | 58305240 | ID=Msa0128510-mRNA-1:exon:18763;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58306524 | 58306609 | 58306524 | ID=Msa0128510-mRNA-1:exon:18762;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58306687 | 58306764 | 58306687 | ID=Msa0128510-mRNA-1:exon:18761;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58306849 | 58306998 | 58306849 | ID=Msa0128510-mRNA-1:exon:18760;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58307556 | 58307594 | 58307556 | ID=Msa0128510-mRNA-1:exon:18759;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58307696 | 58307785 | 58307696 | ID=Msa0128510-mRNA-1:exon:18758;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58308207 | 58308269 | 58308207 | ID=Msa0128510-mRNA-1:exon:18757;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58308359 | 58308428 | 58308359 | ID=Msa0128510-mRNA-1:exon:18756;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58309058 | 58309104 | 58309058 | ID=Msa0128510-mRNA-1:exon:18755;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58309198 | 58309260 | 58309198 | ID=Msa0128510-mRNA-1:exon:18754;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58309352 | 58309402 | 58309352 | ID=Msa0128510-mRNA-1:exon:18753;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58310350 | 58310433 | 58310350 | ID=Msa0128510-mRNA-1:exon:18752;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58310516 | 58310580 | 58310516 | ID=Msa0128510-mRNA-1:exon:18751;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58311809 | 58311865 | 58311809 | ID=Msa0128510-mRNA-1:exon:18750;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58311970 | 58312087 | 58311970 | ID=Msa0128510-mRNA-1:exon:18749;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58312208 | 58312258 | 58312208 | ID=Msa0128510-mRNA-1:exon:18748;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58312354 | 58312440 | 58312354 | ID=Msa0128510-mRNA-1:exon:18747;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58312564 | 58312643 | 58312564 | ID=Msa0128510-mRNA-1:exon:18746;Parent=Msa0128510-mRNA-1 |
| chr1_3 | exon | 58312731 | 58312999 | 58312731 | ID=Msa0128510-mRNA-1:exon:18745;Parent=Msa0128510-mRNA-1 |
| chr1_3 | five_prime_UTR | 58312849 | 58312999 | 58312849 | ID=Msa0128510-mRNA-1:five_prime_utr;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58312731 | 58312848 | 58312731 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58312564 | 58312643 | 58312564 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58312354 | 58312440 | 58312354 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58312208 | 58312258 | 58312208 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58311970 | 58312087 | 58311970 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58311809 | 58311865 | 58311809 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58310516 | 58310580 | 58310516 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58310350 | 58310433 | 58310350 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58309352 | 58309402 | 58309352 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58309198 | 58309260 | 58309198 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58309058 | 58309104 | 58309058 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58308359 | 58308428 | 58308359 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58308207 | 58308269 | 58308207 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58307696 | 58307785 | 58307696 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58307556 | 58307594 | 58307556 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58306849 | 58306998 | 58306849 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58306687 | 58306764 | 58306687 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58306524 | 58306609 | 58306524 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58305240 | 58305288 | 58305240 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58305070 | 58305150 | 58305070 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58304779 | 58304872 | 58304779 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | CDS | 58304363 | 58304430 | 58304363 | ID=Msa0128510-mRNA-1:cds;Parent=Msa0128510-mRNA-1 |
| chr1_3 | three_prime_UTR | 58304316 | 58304362 | 58304316 | ID=Msa0128510-mRNA-1:three_prime_utr;Parent=Msa0128510-mRNA-1 |
| chr1_3 | three_prime_UTR | 58303431 | 58303830 | 58303431 | ID=Msa0128510-mRNA-1:three_prime_utr;Parent=Msa0128510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
