AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0084540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084540 MtrunA17_Chr1g0198931 97.938 679 14 0 1 679 1 679 0.0 1379
Msa0084540 MtrunA17_Chr5g0408061 60.984 610 218 6 71 676 42 635 0.0 745
Msa0084540 MtrunA17_Chr8g0359931 53.094 614 267 9 73 681 34 631 0.0 630
Msa0084540 MtrunA17_Chr1g0200651 51.205 664 283 13 42 676 14 665 0.0 612
Msa0084540 MtrunA17_Chr1g0176441 46.119 657 297 12 41 676 117 737 0.0 572
Msa0084540 MtrunA17_Chr1g0176451 47.791 611 280 9 76 676 1 582 0.0 564
Msa0084540 MtrunA17_Chr7g0267971 46.870 623 281 11 73 676 135 726 0.0 545
Msa0084540 MtrunA17_Chr3g0102731 44.485 544 272 8 73 596 54 587 1.50e-147 441
Msa0084540 MtrunA17_Chr5g0446901 43.407 546 280 8 73 596 64 602 3.43e-143 431
Msa0084540 MtrunA17_Chr2g0318061 55.330 394 158 6 74 466 1 377 2.49e-142 420
Msa0084540 MtrunA17_Chr1g0208391 30.732 615 378 14 42 640 46 628 2.03e-84 281
Msa0084540 MtrunA17_Chr2g0318071 55.947 227 96 3 458 681 12 237 9.08e-81 256
Msa0084540 MtrunA17_Chr1g0213091 30.941 627 375 19 45 624 44 659 6.51e-76 259
Msa0084540 MtrunA17_Chr7g0263351 30.703 583 367 13 73 626 82 656 8.45e-74 253
Msa0084540 MtrunA17_Chr4g0039251 31.335 517 310 11 104 594 90 587 1.59e-69 241
Msa0084540 MtrunA17_Chr6g0477811 28.903 647 374 19 76 679 47 650 3.93e-68 236
Msa0084540 MtrunA17_Chr4g0050251 29.285 601 382 19 104 679 70 652 1.15e-67 235
Msa0084540 MtrunA17_Chr4g0039261 30.882 544 316 15 104 613 48 565 3.53e-66 231
Msa0084540 MtrunA17_Chr4g0050261 28.594 640 377 18 104 679 70 693 9.05e-66 231
Msa0084540 MtrunA17_Chr2g0316301 28.660 642 390 19 62 675 26 627 5.80e-65 226
Msa0084540 MtrunA17_Chr4g0050291 29.827 637 383 23 72 676 24 628 5.37e-64 224
Msa0084540 MtrunA17_Chr4g0065231 31.250 592 352 19 107 675 75 634 2.50e-63 222
Msa0084540 MtrunA17_Chr1g0171351 27.448 623 398 17 10 608 797 1389 2.94e-62 226
Msa0084540 MtrunA17_Chr1g0171351 27.531 563 331 19 102 609 171 711 2.38e-42 166
Msa0084540 MtrunA17_Chr4g0050221 29.883 599 369 19 98 670 25 598 7.45e-62 218
Msa0084540 MtrunA17_Chr1g0148841 29.066 578 366 14 66 626 842 1392 1.51e-60 220
Msa0084540 MtrunA17_Chr1g0148841 28.120 569 341 17 107 627 166 714 2.99e-37 150
Msa0084540 MtrunA17_Chr1g0199471 32.649 536 299 19 69 570 493 1000 4.35e-60 218
Msa0084540 MtrunA17_Chr8g0384391 27.751 627 394 16 81 676 36 634 1.16e-59 212
Msa0084540 MtrunA17_Chr7g0265991 27.411 591 366 15 49 608 7 565 1.66e-59 211
Msa0084540 MtrunA17_Chr3g0104621 30.070 572 336 21 66 607 729 1266 4.61e-59 216
Msa0084540 MtrunA17_Chr3g0104621 28.873 568 325 19 86 595 28 574 4.05e-41 162
Msa0084540 MtrunA17_Chr7g0262251 27.711 664 401 23 66 684 792 1421 4.38e-58 213
Msa0084540 MtrunA17_Chr7g0262251 27.323 538 346 16 107 615 175 696 7.37e-42 164
Msa0084540 MtrunA17_Chr7g0262231 28.376 585 355 17 66 623 848 1395 6.67e-58 213
Msa0084540 MtrunA17_Chr7g0262231 27.390 544 320 20 107 597 162 683 4.26e-42 164
Msa0084540 MtrunA17_Chr8g0340651 26.870 655 409 21 5 627 806 1422 3.34e-57 210
Msa0084540 MtrunA17_Chr8g0340651 27.165 589 345 24 99 632 172 731 1.39e-37 150
Msa0084540 MtrunA17_Chr1g0202431 29.506 627 393 17 68 675 5 601 5.57e-57 204
Msa0084540 MtrunA17_Chr1g0148811 28.547 578 369 15 66 626 819 1369 2.22e-56 208
Msa0084540 MtrunA17_Chr1g0148811 27.835 582 326 24 107 627 154 702 1.33e-32 135
Msa0084540 MtrunA17_Chr7g0262241 28.799 566 353 17 66 612 844 1378 1.15e-55 206
Msa0084540 MtrunA17_Chr7g0262241 26.607 560 340 18 107 615 162 701 8.71e-40 157
Msa0084540 MtrunA17_Chr2g0332221 27.807 561 362 15 66 611 820 1352 1.27e-55 206
Msa0084540 MtrunA17_Chr2g0332221 26.937 542 325 17 107 597 167 688 2.65e-41 162
Msa0084540 MtrunA17_Chr8g0393191 41.237 291 160 7 76 363 43 325 1.51e-55 203
Msa0084540 MtrunA17_Chr7g0265981 27.243 613 385 17 31 617 810 1387 2.33e-55 205
Msa0084540 MtrunA17_Chr7g0265981 26.056 568 343 18 97 609 174 719 4.59e-31 130
Msa0084540 MtrunA17_Chr2g0332241 27.036 614 396 19 16 611 774 1353 4.03e-55 204
Msa0084540 MtrunA17_Chr2g0332241 25.865 607 366 19 42 597 115 688 1.60e-41 163
Msa0084540 MtrunA17_Chr7g0262261 28.893 578 344 18 66 610 768 1311 8.24e-55 203
Msa0084540 MtrunA17_Chr7g0262261 26.643 563 348 16 82 597 110 654 8.24e-46 176
Msa0084540 MtrunA17_Chr1g0198291 27.184 618 399 17 13 608 801 1389 8.35e-55 203
Msa0084540 MtrunA17_Chr1g0198291 28.942 501 275 20 106 550 188 663 6.49e-37 149
Msa0084540 MtrunA17_Chr2g0332211 27.629 561 363 15 66 611 904 1436 9.16e-55 203
Msa0084540 MtrunA17_Chr2g0332211 27.539 581 350 20 107 635 248 809 1.67e-41 163
Msa0084540 MtrunA17_Chr3g0130331 27.863 585 405 10 104 676 55 634 1.35e-54 197
Msa0084540 MtrunA17_Chr5g0411621 38.957 326 170 10 72 390 17 320 1.61e-54 199
Msa0084540 MtrunA17_Chr4g0003981 27.000 600 392 16 27 608 789 1360 2.58e-54 202
Msa0084540 MtrunA17_Chr4g0003981 33.127 323 164 11 42 328 121 427 6.99e-36 145
Msa0084540 MtrunA17_Chr7g0265971 27.778 594 347 19 66 617 840 1393 6.04e-54 201
Msa0084540 MtrunA17_Chr7g0265971 25.704 568 345 19 97 609 168 713 6.31e-37 149
Msa0084540 MtrunA17_Chr3g0138261 27.922 616 394 18 66 663 835 1418 1.09e-53 200
Msa0084540 MtrunA17_Chr3g0138261 27.018 570 357 16 81 605 140 695 4.93e-43 167
Msa0084540 MtrunA17_Chr0c20g0493841 27.987 611 385 18 34 623 794 1370 1.25e-53 199
Msa0084540 MtrunA17_Chr0c20g0493841 33.213 277 143 10 107 346 168 439 2.61e-32 134
Msa0084540 MtrunA17_Chr2g0331081 27.478 575 373 15 66 623 856 1403 2.40e-53 199
Msa0084540 MtrunA17_Chr2g0331081 27.179 585 360 22 94 632 168 732 3.69e-36 146
Msa0084540 MtrunA17_Chr7g0261971 28.416 644 388 22 66 677 840 1442 2.60e-52 196
Msa0084540 MtrunA17_Chr7g0261971 27.387 555 342 18 107 615 158 697 1.93e-39 156
Msa0084540 MtrunA17_Chr5g0429871 30.077 522 317 17 31 535 599 1089 5.19e-52 194
Msa0084540 MtrunA17_Chr5g0429871 24.950 497 311 16 147 597 20 500 2.01e-31 131
Msa0084540 MtrunA17_Chr7g0262221 27.474 586 345 20 66 612 819 1363 3.32e-51 192
Msa0084540 MtrunA17_Chr7g0262221 28.000 525 323 17 107 597 163 666 2.15e-44 172
Msa0084540 MtrunA17_Chr7g0264441 39.130 322 181 8 105 420 277 589 5.54e-51 190
Msa0084540 MtrunA17_Chr7g0261951 27.866 567 356 16 66 612 844 1377 8.20e-51 191
Msa0084540 MtrunA17_Chr7g0261951 27.807 561 332 18 107 615 162 701 8.19e-38 151
Msa0084540 MtrunA17_Chr1g0180971 43.952 248 133 5 105 349 411 655 9.07e-51 189
Msa0084540 MtrunA17_Chr4g0062871 28.164 561 349 20 66 604 809 1337 2.07e-50 190
Msa0084540 MtrunA17_Chr4g0062871 28.801 559 323 19 99 604 144 680 1.23e-33 138
Msa0084540 MtrunA17_Chr4g0003971 28.369 564 357 17 66 612 790 1323 5.52e-50 189
Msa0084540 MtrunA17_Chr4g0003971 28.265 559 320 21 94 597 150 682 2.35e-42 165
Msa0084540 MtrunA17_Chr7g0261981 27.180 688 432 23 3 677 771 1402 1.65e-49 187
Msa0084540 MtrunA17_Chr7g0261981 27.807 561 332 19 107 615 162 701 4.28e-40 158
Msa0084540 MtrunA17_Chr4g0004021 29.526 464 287 14 66 515 828 1265 1.97e-48 184
Msa0084540 MtrunA17_Chr4g0004021 28.378 518 316 17 107 581 171 676 5.74e-36 145
Msa0084540 MtrunA17_Chr4g0028621 43.463 283 136 9 72 349 486 749 2.79e-48 183
Msa0084540 MtrunA17_Chr7g0265961 25.719 556 358 14 66 608 796 1309 1.08e-47 182
Msa0084540 MtrunA17_Chr7g0265961 26.808 567 340 20 97 609 172 717 9.30e-39 154
Msa0084540 MtrunA17_Chr2g0327241 24.928 690 454 19 15 675 46 700 1.91e-46 176
Msa0084540 MtrunA17_Chr4g0039231 35.430 302 158 9 146 427 1 285 7.60e-44 167
Msa0084540 MtrunA17_Chr4g0026731 26.782 519 335 17 140 623 12 520 2.24e-43 165
Msa0084540 MtrunA17_Chr7g0262321 35.417 288 165 8 70 346 535 812 4.28e-43 167
Msa0084540 MtrunA17_Chr7g0262321 27.889 398 241 17 212 589 24 395 3.57e-22 102
Msa0084540 MtrunA17_Chr4g0050201 27.648 557 341 19 145 670 2 527 4.81e-41 157
Msa0084540 MtrunA17_Chr6g0472481 38.889 198 117 3 107 302 13 208 3.62e-37 140
Msa0084540 MtrunA17_Chr4g0069211 35.294 272 161 7 34 302 782 1041 6.62e-37 148
Msa0084540 MtrunA17_Chr4g0069211 30.686 277 139 11 107 346 167 427 1.53e-24 109
Msa0084540 MtrunA17_Chr7g0266001 26.631 567 341 21 97 609 53 598 1.46e-36 146
Msa0084540 MtrunA17_Chr3g0093331 40.580 207 115 5 127 328 18 221 3.52e-35 134
Msa0084540 MtrunA17_Chr4g0047831 62.500 80 30 0 228 307 5 84 4.62e-26 102
Msa0084540 MtrunA17_Chr7g0215001 24.250 400 234 14 255 612 1 373 8.40e-21 95.1
Msa0084540 MtrunA17_Chr5g0433051 32.618 233 132 10 105 324 479 699 1.62e-18 90.1
Msa0084540 MtrunA17_Chr7g0249091 29.185 233 131 7 105 314 98 319 2.81e-18 87.0
Msa0084540 MtrunA17_Chr1g0178481 33.014 209 122 9 107 308 396 593 1.05e-16 84.0
Msa0084540 MtrunA17_Chr7g0227391 29.384 211 123 9 116 315 451 646 3.69e-16 82.4
Msa0084540 MtrunA17_Chr7g0238421 33.333 147 81 4 117 259 14 147 3.80e-16 78.6
Msa0084540 MtrunA17_Chr4g0061601 28.631 241 153 9 101 334 398 626 5.74e-16 81.6
Msa0084540 MtrunA17_Chr5g0410921 30.660 212 125 9 117 320 383 580 5.08e-15 79.3
Msa0084540 MtrunA17_Chr5g0410921 28.095 210 133 8 118 321 1017 1214 6.10e-13 72.8
Msa0084540 MtrunA17_Chr6g0451911 30.093 216 130 8 107 314 1032 1234 5.84e-15 79.3
Msa0084540 MtrunA17_Chr5g0433071 30.222 225 136 8 105 318 481 695 6.78e-15 78.6
Msa0084540 MtrunA17_Chr3g0093041 27.572 243 155 8 119 356 207 433 3.28e-14 76.3
Msa0084540 MtrunA17_Chr8g0390471 39.175 97 57 2 107 201 5 101 3.53e-14 69.3
Msa0084540 MtrunA17_Chr6g0453051 29.665 209 123 9 116 315 1034 1227 3.66e-14 76.6
Msa0084540 MtrunA17_Chr6g0453051 30.244 205 123 9 117 314 390 581 4.48e-11 66.6
Msa0084540 MtrunA17_Chr8g0344651 27.984 243 142 11 107 338 615 835 5.47e-14 76.3
Msa0084540 MtrunA17_Chr3g0123411 27.477 222 141 9 107 321 922 1130 7.56e-14 75.5
Msa0084540 MtrunA17_Chr7g0257341 27.604 192 125 4 119 308 584 763 1.23e-13 75.1
Msa0084540 MtrunA17_Chr7g0257341 26.667 210 136 8 85 289 1458 1654 6.80e-11 66.2
Msa0084540 MtrunA17_Chr6g0474071 31.122 196 117 7 106 293 229 414 1.57e-13 73.6
Msa0084540 MtrunA17_Chr7g0264631 30.189 212 122 9 107 308 443 638 1.81e-13 74.3
Msa0084540 MtrunA17_Chr6g0452141 29.907 214 128 9 107 308 1034 1237 2.75e-13 73.6
Msa0084540 MtrunA17_Chr6g0452171 27.830 212 141 6 107 314 1037 1240 4.05e-13 73.2
Msa0084540 MtrunA17_Chr6g0452041 27.619 210 138 6 107 308 1036 1239 7.12e-13 72.4
Msa0084540 MtrunA17_Chr1g0180601 30.846 201 113 9 118 308 427 611 7.38e-13 72.4
Msa0084540 MtrunA17_Chr1g0180601 27.500 200 127 8 115 308 1080 1267 2.48e-11 67.4
Msa0084540 MtrunA17_Chr3g0102741 37.647 85 52 1 593 676 2 86 7.42e-13 64.7
Msa0084540 MtrunA17_Chr3g0128381 25.108 231 149 8 104 321 404 623 7.46e-13 72.0
Msa0084540 MtrunA17_Chr7g0233901 28.000 225 139 9 107 321 1012 1223 9.45e-13 72.0
Msa0084540 MtrunA17_Chr6g0451881 28.000 200 130 6 117 308 1034 1227 9.50e-13 72.0
Msa0084540 MtrunA17_Chr3g0132711 23.482 247 168 6 119 359 221 452 1.18e-12 71.2
Msa0084540 MtrunA17_Chr6g0452061 27.358 212 142 6 107 314 546 749 1.40e-12 71.2
Msa0084540 MtrunA17_Chr1g0156821 27.778 216 138 8 117 326 1021 1224 1.89e-12 70.9
Msa0084540 MtrunA17_Chr6g0452071 27.619 210 138 6 107 308 230 433 2.09e-12 70.1
Msa0084540 MtrunA17_Chr6g0452111 26.887 212 143 6 107 314 1035 1238 5.05e-12 69.7
Msa0084540 MtrunA17_Chr2g0285311 27.313 227 146 9 106 325 385 599 5.17e-12 69.7
Msa0084540 MtrunA17_Chr4g0041871 25.000 260 174 10 64 315 979 1225 8.31e-12 68.9
Msa0084540 MtrunA17_Chr4g0041871 28.037 214 140 8 118 327 371 574 8.83e-12 68.9
Msa0084540 MtrunA17_Chr2g0285191 27.442 215 138 8 106 314 414 616 1.51e-11 68.2
Msa0084540 MtrunA17_Chr4g0060421 26.667 195 127 6 118 308 163 345 1.84e-11 67.0
Msa0084540 MtrunA17_Chr6g0472531 26.293 232 130 10 100 320 581 782 2.22e-11 67.8
Msa0084540 MtrunA17_Chr3g0093091 27.841 176 112 5 118 289 648 812 2.32e-11 67.4
Msa0084540 MtrunA17_Chr4g0060401 26.291 213 140 7 81 289 606 805 3.34e-11 67.0
Msa0084540 MtrunA17_Chr4g0060431 25.532 235 156 7 118 348 628 847 3.52e-11 66.6
Msa0084540 MtrunA17_Chr4g0060471 24.561 228 153 7 123 346 1 213 3.60e-11 64.7
Msa0084540 MtrunA17_Chr1g0194031 27.570 214 137 8 107 314 401 602 8.07e-11 65.5
Msa0084540 MtrunA17_Chr4g0060501 27.273 176 113 5 118 289 643 807 9.67e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084540 AT3G25620.2 66.325 683 210 9 1 676 1 670 0.0 856
Msa0084540 AT1G31770.1 57.364 645 262 8 31 675 11 642 0.0 741
Msa0084540 AT4G27420.1 53.994 626 266 8 64 681 25 636 0.0 642
Msa0084540 AT5G06530.2 47.673 623 276 11 73 676 154 745 0.0 585
Msa0084540 AT5G06530.1 47.673 623 276 11 73 676 154 745 0.0 585
Msa0084540 AT1G71960.1 48.244 655 293 13 54 676 18 658 0.0 567
Msa0084540 AT3G25620.1 61.945 473 160 9 1 466 1 460 0.0 551
Msa0084540 AT5G06530.3 48.644 553 251 8 73 607 154 691 0.0 534
Msa0084540 AT5G06530.4 50.199 502 226 8 124 607 1 496 1.67e-172 502
Msa0084540 AT3G13220.1 42.136 674 345 12 32 682 32 683 6.41e-172 508
Msa0084540 AT2G01320.1 31.181 635 377 18 70 681 64 661 4.41e-91 299
Msa0084540 AT2G01320.4 31.181 635 377 18 70 681 64 661 4.41e-91 299
Msa0084540 AT2G01320.3 31.181 635 377 18 70 681 64 661 4.61e-91 299
Msa0084540 AT2G01320.2 31.181 635 377 18 70 681 64 661 4.96e-91 299
Msa0084540 AT2G01320.8 32.027 587 346 16 70 634 64 619 7.99e-91 296
Msa0084540 AT2G01320.5 32.027 587 346 16 70 634 64 619 7.99e-91 296
Msa0084540 AT2G01320.7 34.221 488 275 14 70 542 64 520 9.87e-82 268
Msa0084540 AT2G01320.6 34.221 488 275 14 70 542 64 520 9.87e-82 268
Msa0084540 AT3G55100.1 32.513 569 345 14 73 623 19 566 1.77e-78 264
Msa0084540 AT3G55100.2 32.513 569 345 14 73 623 19 566 1.77e-78 264
Msa0084540 AT2G37360.1 32.686 566 351 16 73 616 95 652 2.83e-76 260
Msa0084540 AT3G55090.1 30.822 584 372 15 73 631 70 646 1.30e-73 252
Msa0084540 AT3G55110.1 31.972 563 347 14 73 616 60 605 1.76e-73 251
Msa0084540 AT5G13580.1 31.952 579 350 13 68 616 60 624 4.16e-73 251
Msa0084540 AT3G55130.1 31.199 609 364 20 34 616 43 622 1.78e-72 249
Msa0084540 AT2G39350.1 31.525 590 358 15 73 624 64 645 9.92e-72 247
Msa0084540 AT3G21090.1 30.177 623 355 21 104 679 42 631 1.93e-71 245
Msa0084540 AT3G53510.1 32.734 556 352 12 76 616 88 636 8.22e-71 245
Msa0084540 AT1G17840.1 30.944 572 330 17 76 616 50 587 5.07e-69 239
Msa0084540 AT1G51460.1 29.402 619 369 17 104 676 27 623 9.86e-69 238
Msa0084540 AT1G51500.1 29.527 613 374 20 104 679 41 632 3.41e-68 236
Msa0084540 AT2G13610.1 30.581 654 407 21 43 676 10 636 1.75e-67 234
Msa0084540 AT1G53270.1 30.707 622 367 22 76 685 19 588 1.30e-66 230
Msa0084540 AT2G37280.1 28.413 630 399 18 10 623 759 1352 4.44e-66 237
Msa0084540 AT2G37280.1 26.763 553 329 19 106 604 153 683 3.48e-38 153
Msa0084540 AT2G37280.3 28.413 630 399 18 10 623 788 1381 5.22e-66 237
Msa0084540 AT2G37280.3 25.258 582 330 19 106 604 153 712 3.15e-34 140
Msa0084540 AT2G37280.4 28.526 631 397 19 10 623 601 1194 6.46e-66 236
Msa0084540 AT2G37280.4 26.160 539 322 19 120 604 9 525 2.43e-33 138
Msa0084540 AT3G53480.1 29.791 574 361 17 66 623 842 1389 2.03e-65 235
Msa0084540 AT3G53480.1 28.036 560 326 25 100 607 184 718 5.11e-36 146
Msa0084540 AT2G37280.2 28.738 602 379 17 10 597 759 1324 3.08e-63 229
Msa0084540 AT2G37280.2 27.125 553 327 20 106 604 153 683 3.65e-38 153
Msa0084540 AT4G15236.1 28.908 595 373 14 46 623 768 1329 2.39e-62 226
Msa0084540 AT4G15236.1 27.986 561 324 22 99 604 147 682 3.44e-43 168
Msa0084540 AT4G15233.1 29.123 570 354 14 71 623 795 1331 6.14e-62 225
Msa0084540 AT4G15233.1 27.778 558 315 21 107 604 155 684 1.34e-42 167
Msa0084540 AT4G15233.7 29.123 570 354 14 71 623 777 1313 6.41e-62 225
Msa0084540 AT4G15233.7 28.519 540 316 21 107 604 155 666 7.20e-44 171
Msa0084540 AT4G15233.8 29.123 570 354 14 71 623 786 1322 8.06e-62 224
Msa0084540 AT4G15233.8 27.061 558 310 22 107 604 155 675 3.18e-37 150
Msa0084540 AT4G15233.3 28.862 589 369 14 71 642 733 1288 9.49e-62 224
Msa0084540 AT4G15233.3 27.768 551 324 19 107 604 93 622 1.91e-42 166
Msa0084540 AT4G15233.6 28.862 589 369 14 71 642 733 1288 9.49e-62 224
Msa0084540 AT4G15233.6 27.768 551 324 19 107 604 93 622 1.91e-42 166
Msa0084540 AT3G16340.1 29.928 558 343 18 66 604 806 1334 3.92e-61 223
Msa0084540 AT3G16340.1 28.381 599 335 24 94 632 151 715 1.09e-40 160
Msa0084540 AT3G16340.2 29.928 558 343 18 66 604 801 1329 5.32e-61 222
Msa0084540 AT3G16340.2 27.759 598 335 23 94 632 151 710 4.19e-38 153
Msa0084540 AT1G59870.1 28.596 577 364 16 66 623 859 1406 1.43e-60 221
Msa0084540 AT1G59870.1 26.711 599 345 23 94 632 175 739 1.57e-35 145
Msa0084540 AT4G15233.2 29.107 560 344 14 71 610 795 1321 1.44e-60 221
Msa0084540 AT4G15233.2 27.778 558 315 21 107 604 155 684 1.05e-42 167
Msa0084540 AT1G15210.1 29.167 576 362 18 66 623 832 1379 1.60e-60 221
Msa0084540 AT1G15210.1 26.510 596 350 25 94 632 173 737 6.41e-34 140
Msa0084540 AT1G53390.1 31.365 542 283 18 76 570 507 1006 1.16e-59 218
Msa0084540 AT4G15230.4 28.214 599 380 13 41 623 696 1260 1.27e-59 218
Msa0084540 AT4G15230.4 28.086 559 326 21 99 604 71 606 1.64e-44 172
Msa0084540 AT4G15230.3 28.381 599 379 14 41 623 775 1339 1.35e-59 218
Msa0084540 AT4G15230.3 28.086 559 326 21 99 604 150 685 2.07e-44 172
Msa0084540 AT4G15230.1 28.381 599 379 14 41 623 775 1339 1.35e-59 218
Msa0084540 AT4G15230.1 28.086 559 326 21 99 604 150 685 2.07e-44 172
Msa0084540 AT5G19410.1 29.452 584 357 15 107 672 66 612 1.96e-59 211
Msa0084540 AT5G19410.2 29.452 584 357 15 107 672 75 621 2.67e-59 211
Msa0084540 AT2G37010.2 30.627 542 322 19 105 615 498 1016 2.27e-58 214
Msa0084540 AT2G37010.1 30.627 542 322 19 105 615 498 1016 2.27e-58 214
Msa0084540 AT2G29940.1 29.558 565 342 20 66 607 818 1349 7.40e-58 213
Msa0084540 AT2G29940.1 28.722 571 331 20 99 615 167 715 6.37e-45 174
Msa0084540 AT4G15215.8 28.986 621 381 17 19 623 750 1326 1.68e-57 212
Msa0084540 AT4G15215.8 27.094 561 322 21 99 604 144 672 3.80e-40 159
Msa0084540 AT4G15215.10 28.986 621 381 17 19 623 750 1326 1.68e-57 212
Msa0084540 AT4G15215.10 27.094 561 322 21 99 604 144 672 3.80e-40 159
Msa0084540 AT4G15215.6 28.986 621 381 17 19 623 750 1326 1.68e-57 212
Msa0084540 AT4G15215.6 27.094 561 322 21 99 604 144 672 3.80e-40 159
Msa0084540 AT4G15215.7 28.986 621 381 17 19 623 750 1326 1.68e-57 212
Msa0084540 AT4G15215.7 27.094 561 322 21 99 604 144 672 3.80e-40 159
Msa0084540 AT4G15215.11 28.986 621 381 17 19 623 760 1336 1.96e-57 211
Msa0084540 AT4G15215.11 27.580 562 325 22 99 604 147 682 2.37e-42 166
Msa0084540 AT4G15215.1 28.986 621 381 17 19 623 753 1329 2.01e-57 211
Msa0084540 AT4G15215.1 27.094 561 322 21 99 604 147 675 4.24e-40 159
Msa0084540 AT4G15215.9 28.986 621 381 17 19 623 757 1333 2.31e-57 211
Msa0084540 AT4G15215.9 27.580 562 325 22 99 604 144 679 2.66e-42 166
Msa0084540 AT4G15215.4 28.986 621 381 17 19 623 757 1333 2.31e-57 211
Msa0084540 AT4G15215.4 27.580 562 325 22 99 604 144 679 2.66e-42 166
Msa0084540 AT4G15215.5 28.986 621 381 17 19 623 757 1333 2.31e-57 211
Msa0084540 AT4G15215.5 27.580 562 325 22 99 604 144 679 2.66e-42 166
Msa0084540 AT4G15215.3 28.986 621 381 17 19 623 757 1333 2.31e-57 211
Msa0084540 AT4G15215.3 27.580 562 325 22 99 604 144 679 2.66e-42 166
Msa0084540 AT4G15215.2 28.986 621 381 17 19 623 757 1333 2.31e-57 211
Msa0084540 AT4G15215.2 27.580 562 325 22 99 604 144 679 2.66e-42 166
Msa0084540 AT1G66950.1 27.482 564 360 15 66 611 845 1377 1.72e-56 209
Msa0084540 AT1G66950.1 27.207 555 335 19 106 609 189 725 6.59e-40 158
Msa0084540 AT4G25750.1 29.195 596 338 16 107 675 30 568 2.54e-56 201
Msa0084540 AT4G15230.2 28.371 571 361 13 41 597 775 1311 1.17e-55 206
Msa0084540 AT4G15230.2 28.086 559 326 21 99 604 150 685 1.82e-44 172
Msa0084540 AT4G15233.5 28.626 524 338 12 116 623 685 1188 1.40e-55 206
Msa0084540 AT4G15233.5 28.143 533 327 19 107 604 93 604 1.30e-43 169
Msa0084540 AT4G15233.4 28.626 524 338 12 116 623 685 1188 1.40e-55 206
Msa0084540 AT4G15233.4 28.143 533 327 19 107 604 93 604 1.30e-43 169
Msa0084540 AT1G15520.1 28.850 565 345 20 66 608 817 1346 3.38e-54 202
Msa0084540 AT1G15520.1 26.902 539 329 19 107 597 169 690 4.13e-35 143
Msa0084540 AT3G30842.1 28.648 562 346 18 71 610 816 1344 9.46e-54 200
Msa0084540 AT3G30842.1 27.574 544 319 22 107 597 161 682 7.43e-41 161
Msa0084540 AT2G36380.1 28.000 575 363 18 66 621 844 1386 1.26e-53 200
Msa0084540 AT2G36380.1 27.304 586 352 22 99 634 182 743 1.28e-40 160
Msa0084540 AT2G26910.1 28.811 597 364 23 66 636 810 1371 1.28e-53 200
Msa0084540 AT2G26910.1 28.214 560 327 18 98 604 143 680 1.05e-37 151
Msa0084540 AT5G52860.1 28.640 625 383 17 67 675 3 580 7.91e-52 189
Msa0084540 AT5G60740.1 31.852 540 303 17 72 572 494 1007 5.47e-50 189
Msa0084540 AT2G28070.2 27.169 703 435 27 15 681 52 713 3.54e-48 181
Msa0084540 AT2G28070.1 27.169 703 435 27 15 681 52 713 3.54e-48 181
Msa0084540 AT1G15520.2 29.873 472 275 19 66 515 817 1254 3.07e-47 181
Msa0084540 AT1G15520.2 26.902 539 329 19 107 597 169 690 1.27e-35 145
Msa0084540 AT5G58270.1 32.407 216 128 8 105 314 492 695 1.76e-18 90.5
Msa0084540 AT3G28390.1 30.693 202 128 6 118 315 1008 1201 2.88e-16 84.0
Msa0084540 AT3G28390.1 24.555 281 173 9 118 392 375 622 4.89e-12 70.1
Msa0084540 AT5G39040.1 32.558 215 126 9 101 308 407 609 1.79e-15 80.9
Msa0084540 AT4G25960.1 32.039 206 118 9 118 315 429 620 2.19e-15 80.9
Msa0084540 AT4G25960.1 28.365 208 131 8 114 315 1054 1249 3.25e-12 70.9
Msa0084540 AT4G28620.1 29.630 216 134 8 105 314 452 655 2.95e-15 80.1
Msa0084540 AT5G61690.2 24.399 291 183 11 119 393 559 828 5.03e-15 79.7
Msa0084540 AT1G10680.1 30.638 235 139 9 93 315 358 580 5.55e-15 79.7
Msa0084540 AT1G10680.1 30.882 204 123 8 118 315 1010 1201 1.91e-13 74.7
Msa0084540 AT1G10680.2 30.638 235 139 9 93 315 358 580 5.62e-15 79.7
Msa0084540 AT4G28630.1 28.704 216 136 8 105 314 450 653 6.31e-15 79.0
Msa0084540 AT3G28860.1 29.612 206 127 8 116 315 1036 1229 6.58e-15 79.3
Msa0084540 AT4G25450.1 29.915 234 144 8 106 331 486 707 1.36e-14 78.2
Msa0084540 AT4G25450.3 29.915 234 144 8 106 331 317 538 1.41e-14 77.4
Msa0084540 AT1G27940.1 30.000 210 131 8 116 320 397 595 1.42e-14 78.2
Msa0084540 AT1G27940.1 27.586 203 133 6 117 315 1031 1223 1.07e-12 72.4
Msa0084540 AT1G27940.2 30.000 210 131 8 116 320 183 381 1.66e-14 78.2
Msa0084540 AT1G27940.2 27.723 202 132 6 118 315 818 1009 1.18e-12 72.0
Msa0084540 AT3G47730.1 23.875 289 193 8 86 368 526 793 1.97e-14 77.8
Msa0084540 AT3G28380.1 28.846 208 136 6 118 321 1023 1222 8.57e-14 75.9
Msa0084540 AT3G28380.1 27.805 205 130 8 117 315 386 578 8.34e-12 69.3
Msa0084540 AT5G61730.1 26.786 224 143 8 119 336 550 758 8.89e-14 75.5
Msa0084540 AT5G61730.2 26.786 224 143 8 119 336 560 768 9.17e-14 75.5
Msa0084540 AT1G28010.1 31.000 200 114 9 118 308 400 584 1.28e-13 75.1
Msa0084540 AT1G65410.1 26.180 233 138 7 105 314 97 318 1.87e-13 72.8
Msa0084540 AT3G47740.1 23.443 273 194 6 39 308 563 823 1.97e-13 74.3
Msa0084540 AT3G28415.1 30.622 209 117 10 118 314 1004 1196 1.99e-13 74.7
Msa0084540 AT3G28415.1 28.095 210 133 8 118 321 366 563 4.72e-12 70.1
Msa0084540 AT3G28415.2 30.622 209 117 10 118 314 1012 1204 2.16e-13 74.3
Msa0084540 AT3G28415.2 28.095 210 133 8 118 321 374 571 4.90e-12 70.1
Msa0084540 AT5G61690.1 23.711 291 184 11 119 393 559 827 3.41e-13 73.6
Msa0084540 AT2G36910.1 30.516 213 122 9 106 308 384 580 5.51e-13 73.2
Msa0084540 AT3G47780.1 25.217 230 156 7 82 308 610 826 9.08e-13 72.4
Msa0084540 AT2G41700.2 32.258 155 89 5 119 269 509 651 9.93e-13 72.4
Msa0084540 AT2G41700.2 27.807 187 119 7 108 289 1432 1607 4.86e-11 67.0
Msa0084540 AT2G41700.1 32.258 155 89 5 119 269 579 721 1.02e-12 72.4
Msa0084540 AT2G41700.1 27.807 187 119 7 108 289 1474 1649 5.17e-11 67.0
Msa0084540 AT1G70610.2 26.697 221 135 9 107 315 291 496 1.75e-12 70.9
Msa0084540 AT3G28345.1 27.619 210 134 8 118 321 387 584 1.87e-12 71.6
Msa0084540 AT3G28345.1 31.220 205 121 9 118 314 1023 1215 2.72e-12 70.9
Msa0084540 AT3G47750.1 22.628 274 191 8 48 315 577 835 2.61e-12 70.9
Msa0084540 AT5G61700.2 25.641 195 133 4 98 289 606 791 2.98e-12 70.5
Msa0084540 AT5G61700.4 25.641 195 133 4 98 289 606 791 2.98e-12 70.5
Msa0084540 AT3G47790.1 24.215 223 137 5 98 308 597 799 3.21e-12 70.5
Msa0084540 AT1G70610.1 26.697 221 135 9 107 315 472 677 4.04e-12 70.1
Msa0084540 AT3G28360.1 29.224 219 129 10 107 314 998 1201 4.13e-12 70.5
Msa0084540 AT5G61700.1 24.766 214 147 6 98 308 606 808 1.37e-11 68.6
Msa0084540 AT3G47790.3 24.752 202 122 4 98 287 597 780 2.73e-11 67.4
Msa0084540 AT3G47790.2 24.752 202 122 4 98 287 478 661 3.26e-11 67.0
Msa0084540 AT5G46540.1 28.922 204 127 8 118 315 385 576 4.99e-11 67.0
Msa0084540 AT4G18050.1 29.612 206 121 10 118 314 383 573 5.24e-11 66.6
Msa0084540 AT4G18050.2 29.612 206 121 10 118 314 393 583 5.81e-11 66.6
Msa0084540 AT5G61740.2 25.773 194 130 6 118 308 584 766 6.84e-11 66.2
Msa0084540 AT3G47760.1 24.686 239 158 9 83 315 572 794 7.15e-11 66.2
Msa0084540 AT5G61740.3 25.773 194 130 6 118 308 479 661 8.05e-11 65.9
Msa0084540 AT5G61740.1 25.773 194 130 6 118 308 618 800 8.46e-11 65.9
Msa0084540 AT3G47760.3 24.686 239 158 9 83 315 612 834 9.48e-11 65.9

Find 204 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCTTCTTCTCCATCTTT+TGG 0.148365 1_2:+64091096 Msa0084540:CDS
AATTTAGTCCAAATTCTTTA+TGG 0.155481 1_2:+64092080 Msa0084540:three_prime_UTR
AATTCAAGGTTCTGCTTAAA+AGG 0.168055 1_2:+64090702 Msa0084540:CDS
GTGATTTGATTCGAATTAAA+AGG 0.169086 1_2:+64091992 Msa0084540:three_prime_UTR
CATTAAGTCCTTAGGCATTT+AGG 0.238994 1_2:-64091728 None:intergenic
TAACAAAGTTAAACCAAGTT+TGG 0.258097 1_2:+64087837 Msa0084540:CDS
CTAAATGCCTAAGGACTTAA+TGG 0.273442 1_2:+64091729 Msa0084540:CDS
TGGATCCGTTGGGTTTGTTC+CGG 0.291288 1_2:+64089312 Msa0084540:CDS
TCGGGTTCACCAACATTTCT+TGG 0.309741 1_2:-64089072 None:intergenic
CTCTCCGTTCTGTTTGTGTT+GGG 0.321758 1_2:-64087778 None:intergenic
TCTCCGGTGGGGAGAGAAAA+AGG 0.331729 1_2:+64089038 Msa0084540:CDS
AGCCTTGTTTCTTCATAGTT+AGG 0.342213 1_2:+64087641 Msa0084540:five_prime_UTR
GTGTTGGGTGAGTTGTTATT+TGG 0.343433 1_2:-64087763 None:intergenic
TTTCTCCTTGATCTTGCTAA+TGG 0.346709 1_2:+64089361 Msa0084540:CDS
GCCCTAGCCGGAAGACTTGC+CGG 0.348608 1_2:+64088752 Msa0084540:CDS
GTACTTACTTTGAGTGTAAC+TGG 0.353627 1_2:-64087943 None:intergenic
TTTCCCTGCCGTAAAATGTT+TGG 0.357311 1_2:+64091613 Msa0084540:CDS
TCAAATGAACTAACTCTAAC+TGG 0.358651 1_2:-64092119 None:intergenic
TTCTTCACGCGTAAGTGTCT+TGG 0.363853 1_2:-64088921 None:intergenic
TTGAGGTGAATTCCATTGTT+TGG 0.365263 1_2:+64092233 Msa0084540:three_prime_UTR
GGATCCGTTGGGTTTGTTCC+GGG 0.369435 1_2:+64089313 Msa0084540:CDS
GTAGAGAAGGGTTGCATTGT+AGG 0.372689 1_2:+64091582 Msa0084540:CDS
TCCTGCATGAAACGCAAAAT+AGG 0.375269 1_2:+64088818 Msa0084540:CDS
TGGATGAGAAGGAATATTAA+TGG 0.381396 1_2:-64087875 None:intergenic
TTCCGGCTAGGGCCGTTAGT+AGG 0.384985 1_2:-64088742 None:intergenic
ACTATACTATGATTTATGTT+TGG 0.388718 1_2:+64092160 Msa0084540:three_prime_UTR
ACTGCCTCAGTTAAATTAAG+AGG 0.392645 1_2:+64091970 Msa0084540:three_prime_UTR
CACGGCTCAACTTATTGTTT+CGG 0.395239 1_2:+64089138 Msa0084540:CDS
ATCCTATACAACCGACTTGA+AGG 0.395418 1_2:-64089214 None:intergenic
CACTCCGGTTGGAGGATGTA+TGG 0.395662 1_2:+64089000 Msa0084540:CDS
TGTAGTTTACCCTCACTTAA+CGG 0.403323 1_2:+64088859 Msa0084540:CDS
TGTTTCGGTTCTTCGAGGTT+TGG 0.404999 1_2:+64089153 Msa0084540:CDS
GACACTTACGCGTGAAGAAA+AGG 0.407846 1_2:+64088925 Msa0084540:CDS
CATTGAAAAGCATGATCAAA+AGG 0.408097 1_2:-64091334 None:intergenic
CTAACTCTAACTGGCACATC+TGG 0.409598 1_2:-64092110 None:intergenic
GGATGAACCGACTTCCGGTT+TGG 0.410736 1_2:+64089108 Msa0084540:CDS
TACTGTTATAAGCTGCTTGT+AGG 0.412477 1_2:+64091527 Msa0084540:CDS
TCCGGCAAGTCTTCCGGCTA+GGG 0.416322 1_2:-64088753 None:intergenic
TCTTCACGCGTAAGTGTCTT+GGG 0.418551 1_2:-64088920 None:intergenic
TTGTCTGTTTCCATTCTCTC+AGG 0.422014 1_2:+64090779 Msa0084540:CDS
GTTCTGGTCTCTCAAGGAAT+AGG 0.424448 1_2:+64091356 Msa0084540:CDS
CCCACCAACTTGTGTTCCAT+TGG 0.424808 1_2:-64090676 None:intergenic
CCATTCTCTCAGGACTCCTC+TGG 0.430280 1_2:+64090789 Msa0084540:CDS
TCCGTTGTAAGTTATTGTTC+CGG 0.431399 1_2:-64088783 None:intergenic
CAACATAGTATGATGATAGA+TGG 0.433604 1_2:-64091202 None:intergenic
ATTCAAGGTTCTGCTTAAAA+GGG 0.434766 1_2:+64090703 Msa0084540:CDS
GCTCTCCGTTCTGTTTGTGT+TGG 0.436595 1_2:-64087779 None:intergenic
TTATAGTGGTAATGCGGGTC+GGG 0.436666 1_2:+64089276 Msa0084540:CDS
CCAGAGGAGTCCTGAGAGAA+TGG 0.440248 1_2:-64090789 None:intergenic
TGGTAATGCGGGTCGGGTAA+TGG 0.440894 1_2:+64089282 Msa0084540:CDS
GAGTGTTCCGGCACCGTGTA+AGG 0.441193 1_2:-64088982 None:intergenic
GGTGAATTCCATTGTTTGGA+TGG 0.441405 1_2:+64092237 Msa0084540:three_prime_UTR
GCATTGACTATAATGTTTGT+TGG 0.442314 1_2:+64091665 Msa0084540:CDS
TTGTTGCATATTTAGCTTTG+AGG 0.443906 1_2:+64091696 Msa0084540:CDS
ATGGATTATCTTGGATCCGT+TGG 0.445882 1_2:+64089301 Msa0084540:CDS
CTTCGAGGTTTGGCTCGGTC+CGG 0.448611 1_2:+64089163 Msa0084540:CDS
GTATAGGATGTTTGATAAAG+TGG 0.449267 1_2:+64089228 Msa0084540:CDS
TTCCGGCAAGTCTTCCGGCT+AGG 0.449427 1_2:-64088754 None:intergenic
CATATTTAGCTTTGAGGATG+GGG 0.450017 1_2:+64091702 Msa0084540:CDS
GAGGGAATTCAAATACTTTG+AGG 0.450814 1_2:+64092216 Msa0084540:intron
ACTGTTATAAGCTGCTTGTA+GGG 0.453743 1_2:+64091528 Msa0084540:CDS
TAATTGACATGAAAATGAAA+TGG 0.457548 1_2:+64092038 Msa0084540:three_prime_UTR
CGGTTCTTCGAGGTTTGGCT+CGG 0.465676 1_2:+64089158 Msa0084540:CDS
CGGCACTTACACTTCCATAC+TGG 0.466112 1_2:-64091876 None:intergenic
GCCGTAAAATGTTTGGAGCT+TGG 0.466643 1_2:+64091620 Msa0084540:CDS
TGAATATCTTCTTTAAGAGC+AGG 0.467009 1_2:-64090482 None:intergenic
CTTATTGTTTCGGTTCTTCG+AGG 0.467582 1_2:+64089148 Msa0084540:CDS
TTCAATGTTCTGGTCTCTCA+AGG 0.468386 1_2:+64091350 Msa0084540:CDS
TGGATTATCTTGGATCCGTT+GGG 0.469927 1_2:+64089302 Msa0084540:CDS
AGCCTTCAAGTCGGTTGTAT+AGG 0.470038 1_2:+64089212 Msa0084540:CDS
CTCTCCCGGTCTTGCCACTC+CGG 0.472165 1_2:-64088678 None:intergenic
ACAGCAATGCTAGGACCCTC+AGG 0.475554 1_2:+64088704 Msa0084540:CDS
AATGATGTGAGTGGTGTAGT+TGG 0.475914 1_2:-64087895 None:intergenic
CCCGCATTACCACTATAAAT+CGG 0.476218 1_2:-64089271 None:intergenic
AGTCACCGGAGTGGCAAGAC+CGG 0.477564 1_2:+64088673 Msa0084540:CDS
CAAAGTACAATGAGAATTGA+AGG 0.480373 1_2:-64087606 None:intergenic
TGATTTGATTCGAATTAAAA+GGG 0.482278 1_2:+64091993 Msa0084540:three_prime_UTR
TGCAATCTTTGCATTTCCGC+TGG 0.482627 1_2:+64091139 Msa0084540:CDS
TATCATCATACTATGTTGCT+AGG 0.484472 1_2:+64091207 Msa0084540:CDS
GTGAATTCCATTGTTTGGAT+GGG 0.488356 1_2:+64092238 Msa0084540:three_prime_UTR
AGCATTGCTGTTAACTCTCC+CGG 0.489375 1_2:-64088692 None:intergenic
ACCATCTGGTTCACCATGGA+TGG 0.489910 1_2:-64087806 None:intergenic
TGCATATTTAGCTTTGAGGA+TGG 0.490680 1_2:+64091700 Msa0084540:CDS
TTTCATGTCAATTATTTACA+AGG 0.494843 1_2:-64092029 None:intergenic
GCAAAGATTGCATTGAAGAG+AGG 0.497435 1_2:-64091128 None:intergenic
ATCCTCCAACCGGAGTGTTC+CGG 0.498291 1_2:-64088994 None:intergenic
TGTAACTATCACCTACTGGA+TGG 0.499220 1_2:+64091274 Msa0084540:CDS
TTACCCTCACTTAACGGTGT+TGG 0.499552 1_2:+64088865 Msa0084540:CDS
ACGCATTTAATTCGAAGTGT+TGG 0.501332 1_2:-64091770 None:intergenic
AAGTTGGTGGGAGCAATTCA+AGG 0.501653 1_2:+64090688 Msa0084540:CDS
TGAATTCCATTGTTTGGATG+GGG 0.501764 1_2:+64092239 Msa0084540:three_prime_UTR
GAATGGAAACAGACAAGACT+TGG 0.502369 1_2:-64090772 None:intergenic
GAGGTTTATGAATGTAGAGA+AGG 0.503307 1_2:+64091569 Msa0084540:CDS
GCATATTTAGCTTTGAGGAT+GGG 0.503455 1_2:+64091701 Msa0084540:CDS
GCACATTAACACTGAACCAC+TGG 0.505606 1_2:+64090505 Msa0084540:CDS
TTGTTAGAAGAAGAACCATC+TGG 0.507820 1_2:-64087820 None:intergenic
GGTCGGGTAATGGATTATCT+TGG 0.509125 1_2:+64089292 Msa0084540:CDS
TGCCGGAACACTCCGGTTGG+AGG 0.510189 1_2:+64088992 Msa0084540:CDS
ATCATACTATGTTGCTAGGA+TGG 0.510933 1_2:+64091211 Msa0084540:CDS
TCTCCCCACCGGAGATTCCC+CGG 0.511975 1_2:-64089030 None:intergenic
ACATGAGAGAAGAGATGTAA+AGG 0.514300 1_2:-64087568 None:intergenic
AGGGAAGAATCCCCAAAAGA+TGG 0.517414 1_2:-64091108 None:intergenic
GTAACTATCACCTACTGGAT+GGG 0.517772 1_2:+64091275 Msa0084540:CDS
GGTTCAGTATTCAGTAAATG+AGG 0.517781 1_2:+64091550 Msa0084540:CDS
ATGCTAGGACCCTCAGGGAG+CGG 0.518715 1_2:+64088710 Msa0084540:CDS
TCCGGCTAGGGCCGTTAGTA+GGG 0.518752 1_2:-64088741 None:intergenic
TCCCTCACACATACAAGATC+AGG 0.520206 1_2:+64090823 Msa0084540:CDS
AGCACTTGGTGCAATTCTCA+TGG 0.521935 1_2:+64091382 Msa0084540:CDS
TTGTGATCAATATCCAAACT+TGG 0.522631 1_2:-64087850 None:intergenic
GTAGGAAGAACAAGCTCCAT+TGG 0.522983 1_2:-64091245 None:intergenic
CAAAGATTGCATTGAAGAGA+GGG 0.524564 1_2:-64091127 None:intergenic
AATTCTCATGGATGTTAAGC+AGG 0.526442 1_2:+64091394 Msa0084540:CDS
TTTAACCAAGCTATAAAAGA+AGG 0.526780 1_2:-64091485 None:intergenic
TAGAGAAGGGTTGCATTGTA+GGG 0.528803 1_2:+64091583 Msa0084540:CDS
ACTTACCATTAGCAAGATCA+AGG 0.536943 1_2:-64089366 None:intergenic
AAAATCCTCAACGGAGTCAC+CGG 0.537973 1_2:+64088659 Msa0084540:CDS
GAGAGGATAATCACCGAGCT+TGG 0.538376 1_2:+64088959 Msa0084540:CDS
CCGATTTATAGTGGTAATGC+GGG 0.539048 1_2:+64089271 Msa0084540:CDS
AGCCGTGGTTGAGTCCAAAC+CGG 0.541248 1_2:-64089122 None:intergenic
GTAACTGGTCGCAACGATTG+AGG 0.541770 1_2:-64087928 None:intergenic
AAGTCTCAAGAGTGCGGTGT+AGG 0.547476 1_2:-64088897 None:intergenic
TTCTCTCAGGACTCCTCTGG+TGG 0.547528 1_2:+64090792 Msa0084540:CDS
ATTGAAAAGCATGATCAAAA+GGG 0.548030 1_2:-64091333 None:intergenic
GATGGGTATCCGATTTATAG+TGG 0.550612 1_2:+64089262 Msa0084540:CDS
TTCTAATCCATTAAGTCCTT+AGG 0.552424 1_2:-64091736 None:intergenic
GTCACCGGAGTGGCAAGACC+GGG 0.552629 1_2:+64088674 Msa0084540:CDS
AGGTTTATGAATGTAGAGAA+GGG 0.554104 1_2:+64091570 Msa0084540:CDS
AGTCCCATACATCCTCCAAC+CGG 0.557425 1_2:-64089004 None:intergenic
GTTTGGAGCTTGGTAATATG+TGG 0.558037 1_2:+64091630 Msa0084540:CDS
AATACAAATGTAACTAGTGA+AGG 0.561597 1_2:-64091308 None:intergenic
TCAGTAACACTAACACATGT+TGG 0.561684 1_2:-64091802 None:intergenic
AGTAGTAACAACTGTTCGAC+CGG 0.562855 1_2:-64089182 None:intergenic
AGCTTGGCCTTACACGGTGC+CGG 0.564050 1_2:+64088975 Msa0084540:CDS
TACTATGTTGCTAGGATGGT+AGG 0.565684 1_2:+64091215 Msa0084540:CDS
CCACTCCGGTGACTCCGTTG+AGG 0.567544 1_2:-64088664 None:intergenic
ACCCTACTAACGGCCCTAGC+CGG 0.569697 1_2:+64088740 Msa0084540:CDS
TTTATAGTGGTAATGCGGGT+CGG 0.569799 1_2:+64089275 Msa0084540:CDS
ACGGAGAGCAACTCCATCCA+TGG 0.570220 1_2:+64087793 Msa0084540:CDS
TGGGGCAGCCTAAATGCCTA+AGG 0.571809 1_2:+64091720 Msa0084540:CDS
GGCTAGGGCCGTTAGTAGGG+TGG 0.573601 1_2:-64088738 None:intergenic
TAGGTTCTTCTGATAACCAA+TGG 0.574040 1_2:+64090660 Msa0084540:intron
ACTCCGGTTGGAGGATGTAT+GGG 0.574193 1_2:+64089001 Msa0084540:CDS
CAAGGAATAGGCTTAGCACT+TGG 0.574720 1_2:+64091368 Msa0084540:CDS
ATAACCAATGGAACACAAGT+TGG 0.575523 1_2:+64090672 Msa0084540:CDS
TTTGGAGCTTGGTAATATGT+GGG 0.577127 1_2:+64091631 Msa0084540:CDS
ACCAATGGAACACAAGTTGG+TGG 0.578578 1_2:+64090675 Msa0084540:CDS
TGGTAATATGTGGGGAGATG+TGG 0.581182 1_2:+64091640 Msa0084540:CDS
CTGTTATAAGCTGCTTGTAG+GGG 0.582384 1_2:+64091529 Msa0084540:CDS
AGATCAAGGAGAAAATCAGC+AGG 0.584836 1_2:-64089352 None:intergenic
TCCGATTTATAGTGGTAATG+CGG 0.585845 1_2:+64089270 Msa0084540:CDS
GTTTCCAACACCGTTAAGTG+AGG 0.585941 1_2:-64088869 None:intergenic
GATCTATATTGACACATACA+TGG 0.588711 1_2:-64091907 None:intergenic
CGGCAAAACCACCCTACTAA+CGG 0.588956 1_2:+64088730 Msa0084540:CDS
TTCAAGGTTCTGCTTAAAAG+GGG 0.590163 1_2:+64090704 Msa0084540:CDS
GAATATCTTCTTTAAGAGCA+GGG 0.592877 1_2:-64090481 None:intergenic
AGTGGTGTAGTTGGATGAGA+AGG 0.594250 1_2:-64087886 None:intergenic
GAATTCCATTGTTTGGATGG+GGG 0.595396 1_2:+64092240 Msa0084540:three_prime_UTR
GCACCGTGTAAGGCCAAGCT+CGG 0.596232 1_2:-64088972 None:intergenic
GGAGAGTTAACAGCAATGCT+AGG 0.597991 1_2:+64088695 Msa0084540:CDS
TCTAGCTTCAGTGACAATGT+TGG 0.599945 1_2:+64091424 Msa0084540:CDS
AGACTTGCCGGAAAAGTCAC+CGG 0.603239 1_2:+64088764 Msa0084540:CDS
TTAAAAGGGGTTTACAAGAG+AGG 0.604021 1_2:+64090717 Msa0084540:CDS
AAAGGGGTTTACAAGAGAGG+AGG 0.611686 1_2:+64090720 Msa0084540:CDS
TCACCGAGCTTGGCCTTACA+CGG 0.613858 1_2:+64088969 Msa0084540:CDS
AAAAGGTCGAACACGCGGAG+AGG 0.614805 1_2:+64088942 Msa0084540:CDS
TACACGGTGCCGGAACACTC+CGG 0.615135 1_2:+64088985 Msa0084540:CDS
TCCATCCATGGTGAACCAGA+TGG 0.616065 1_2:+64087805 Msa0084540:CDS
ATCACCTCTTAATTTAACTG+AGG 0.620944 1_2:-64091974 None:intergenic
TTTAGCATTGGTCTATCCAG+CGG 0.622162 1_2:-64091155 None:intergenic
ACCTGATCTTGTATGTGTGA+GGG 0.626328 1_2:-64090824 None:intergenic
TTTCCGGGGAATCTCCGGTG+GGG 0.629242 1_2:+64089027 Msa0084540:CDS
CTATGAAGAAACAAGGCTAG+AGG 0.633416 1_2:-64087636 None:intergenic
CCAATGGAACACAAGTTGGT+GGG 0.633918 1_2:+64090676 Msa0084540:CDS
CTTAAGACCACCCATCCAGT+AGG 0.634783 1_2:-64091285 None:intergenic
AGGGATCAGAGTGCCACCAG+AGG 0.637865 1_2:-64090805 None:intergenic
GAGTATTGGCCAAGAAATGT+TGG 0.639195 1_2:+64089063 Msa0084540:CDS
TCGCAACGATTGAGGAAGAA+CGG 0.640584 1_2:-64087920 None:intergenic
TTTCCAACACCGTTAAGTGA+GGG 0.642376 1_2:-64088868 None:intergenic
CGAAACAATAAGTTGAGCCG+TGG 0.642687 1_2:-64089137 None:intergenic
GTTGAGTCCAAACCGGAAGT+CGG 0.642816 1_2:-64089115 None:intergenic
TACCTGATCTTGTATGTGTG+AGG 0.644183 1_2:-64090825 None:intergenic
ACTATCACCTACTGGATGGG+TGG 0.645064 1_2:+64091278 Msa0084540:CDS
CTCACCCAACACAAACAGAA+CGG 0.646890 1_2:+64087774 Msa0084540:CDS
ACACATACATGGCTCAACAT+CGG 0.647348 1_2:-64091896 None:intergenic
CGGTGCCGGAACACTCCGGT+TGG 0.647421 1_2:+64088989 Msa0084540:CDS
TTCCGGTTTGGACTCAACCA+CGG 0.648488 1_2:+64089120 Msa0084540:CDS
CAGCAATGCTAGGACCCTCA+GGG 0.651059 1_2:+64088705 Msa0084540:CDS
TAGGATGTTTGATAAAGTGG+TGG 0.654029 1_2:+64089231 Msa0084540:CDS
ACCGGAACAATAACTTACAA+CGG 0.657334 1_2:+64088782 Msa0084540:CDS
CTTGGGAAGTCTCAAGAGTG+CGG 0.673648 1_2:-64088903 None:intergenic
TGAAGAAAAGGTCGAACACG+CGG 0.674001 1_2:+64088937 Msa0084540:CDS
ATCCTAACTATGAAGAAACA+AGG 0.674355 1_2:-64087643 None:intergenic
TTGGAGCTTGGTAATATGTG+GGG 0.676443 1_2:+64091632 Msa0084540:CDS
GATGGTAGGAGACTTACCAA+TGG 0.680493 1_2:+64091229 Msa0084540:CDS
AAGAACCATCTGGTTCACCA+TGG 0.682189 1_2:-64087810 None:intergenic
TTAGTGTTACTGACACGACA+CGG 0.683897 1_2:+64091812 Msa0084540:three_prime_UTR
GGATTAACAAAGTTAAAACC+CGG 0.685148 1_2:-64089331 None:intergenic
CTATTCATCAGCCTTCAAGT+CGG 0.687174 1_2:+64089203 Msa0084540:CDS
TAGTTATAAAGTGATGAACA+AGG 0.693065 1_2:-64087537 None:intergenic
AGTACAATGAGAATTGAAGG+AGG 0.708640 1_2:-64087603 None:intergenic
CCTCAACGGAGTCACCGGAG+TGG 0.710656 1_2:+64088664 Msa0084540:CDS
AAAACCCGGAACAAACCCAA+CGG 0.714085 1_2:-64089317 None:intergenic
AATTAGTGACTGTTTCACTG+AGG 0.725096 1_2:-64090435 None:intergenic
AGAACGGAAAATGATGTGAG+TGG 0.728579 1_2:-64087904 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CCTAAATTATTAAATATAAA+AGG - chr1_2:64089480-64089499 None:intergenic 10.0%
!!! CCTTTTATATTTAATAATTT+AGG + chr1_2:64089477-64089496 Msa0084540:intron 10.0%
!! TAAATAATTAATAATAAAGG+AGG + chr1_2:64089849-64089868 Msa0084540:intron 10.0%
!!! GATAATTATTAATTTTTGAT+AGG + chr1_2:64090641-64090660 Msa0084540:intron 10.0%
!!! TTAAATAATGGATAAAACTT+AGG - chr1_2:64088202-64088221 None:intergenic 15.0%
!!! TATTTTGGAGAATTAAATAA+TGG - chr1_2:64088214-64088233 None:intergenic 15.0%
!! TATTTAATAATTTAGGGATT+TGG + chr1_2:64089484-64089503 Msa0084540:intron 15.0%
!!! TCAGATTTTAAAATAGTTAT+AGG - chr1_2:64089514-64089533 None:intergenic 15.0%
!!! TTTTAAAATCTGATAGTTTT+TGG + chr1_2:64089521-64089540 Msa0084540:intron 15.0%
!!! TTTCTCTAGATTTTTTTTTT+TGG + chr1_2:64089544-64089563 Msa0084540:intron 15.0%
!!! ATTTATGTTTGTTGTTTTAT+TGG + chr1_2:64089675-64089694 Msa0084540:intron 15.0%
!! TTTCATGTAAAAAAAAAAGA+TGG + chr1_2:64090238-64090257 Msa0084540:intron 15.0%
!!! AAGTTCTCTATAGAATATTT+TGG + chr1_2:64089569-64089588 Msa0084540:intron 20.0%
!!! TTGTTTTATTGGTATATAAG+TGG + chr1_2:64089686-64089705 Msa0084540:intron 20.0%
!!! AATCAAACAAGTATATGTTT+TGG - chr1_2:64089975-64089994 None:intergenic 20.0%
!!! CATATCTACTAATCTTTTTA+AGG - chr1_2:64090297-64090316 None:intergenic 20.0%
!! ACTTCTAATTATTAAGACTA+TGG + chr1_2:64090348-64090367 Msa0084540:intron 20.0%
!! CTTCTAATTATTAAGACTAT+GGG + chr1_2:64090349-64090368 Msa0084540:intron 20.0%
!!! TTAATGTTGCTTTTACTTTA+AGG + chr1_2:64090582-64090601 Msa0084540:intron 20.0%
!! TTATGTTGTACAAAATCATA+TGG + chr1_2:64090612-64090631 Msa0084540:intron 20.0%
!! GGATCAAATTCAAATATAAA+TGG + chr1_2:64090878-64090897 Msa0084540:intron 20.0%
!! ACATTAGTACATATAAATGA+TGG + chr1_2:64090903-64090922 Msa0084540:intron 20.0%
!! TAAAAAAAGAAAGATCATCA+GGG + chr1_2:64091174-64091193 Msa0084540:CDS 20.0%
!!! CGTATTATTATTTTCAAGAT+CGG + chr1_2:64091936-64091955 Msa0084540:three_prime_UTR 20.0%
!!! TGATTTGATTCGAATTAAAA+GGG + chr1_2:64091993-64092012 Msa0084540:three_prime_UTR 20.0%
!! TTTCATGTCAATTATTTACA+AGG - chr1_2:64092032-64092051 None:intergenic 20.0%
!! TAATTGACATGAAAATGAAA+TGG + chr1_2:64092038-64092057 Msa0084540:three_prime_UTR 20.0%
!! AATTTAGTCCAAATTCTTTA+TGG + chr1_2:64092080-64092099 Msa0084540:three_prime_UTR 20.0%
!! ACTATACTATGATTTATGTT+TGG + chr1_2:64092160-64092179 Msa0084540:three_prime_UTR 20.0%
! TAGTTATAAAGTGATGAACA+AGG - chr1_2:64087540-64087559 None:intergenic 25.0%
!!! TAATAGTTTTTTCTTGCTCA+GGG - chr1_2:64087738-64087757 None:intergenic 25.0%
!!! TTAATAGTTTTTTCTTGCTC+AGG - chr1_2:64087739-64087758 None:intergenic 25.0%
! TAACAAAGTTAAACCAAGTT+TGG + chr1_2:64087837-64087856 Msa0084540:CDS 25.0%
! AGTAAAAGCTATAGTAAGTT+GGG + chr1_2:64088080-64088099 Msa0084540:intron 25.0%
!!! GCATTTTTTTAGCTACTTTT+CGG + chr1_2:64088356-64088375 Msa0084540:intron 25.0%
!! ACATAAATTTCACGTTTTGT+GGG - chr1_2:64088456-64088475 None:intergenic 25.0%
!! AAATTTAAGTGTTTTTCACG+TGG - chr1_2:64088485-64088504 None:intergenic 25.0%
! ATGACAAACCAAAAGAAAAA+CGG + chr1_2:64088602-64088621 Msa0084540:CDS 25.0%
! TCATCCAAAAACAATAAACT+CGG - chr1_2:64089094-64089113 None:intergenic 25.0%
!! TAAGTTCTTGTTTGTTAATC+CGG + chr1_2:64089384-64089403 Msa0084540:intron 25.0%
!!! GTCCTTTTTTTTTGAGTAAT+TGG + chr1_2:64089453-64089472 Msa0084540:intron 25.0%
! GACCAATTACTCAAAAAAAA+AGG - chr1_2:64089458-64089477 None:intergenic 25.0%
!!! TATTTTGGTCTACAATATGA+TGG + chr1_2:64089584-64089603 Msa0084540:intron 25.0%
!! TCTACAATATGATGGAAATA+GGG + chr1_2:64089592-64089611 Msa0084540:intron 25.0%
! TAAATACCAAAAAAGAGCAA+AGG - chr1_2:64089649-64089668 None:intergenic 25.0%
! GTATATAAGTGGAAAGTAAA+AGG + chr1_2:64089697-64089716 Msa0084540:intron 25.0%
!! CTTCTTTTGACAATTTGAAA+AGG + chr1_2:64089910-64089929 Msa0084540:intron 25.0%
! CATGTAAAAAAAAAAGATGG+TGG + chr1_2:64090241-64090260 Msa0084540:intron 25.0%
! AAAAGATTAGTAGATATGCT+TGG + chr1_2:64090299-64090318 Msa0084540:intron 25.0%
!! GAAATTTTTGTGAGATATGA+TGG + chr1_2:64090321-64090340 Msa0084540:intron 25.0%
!! AGGGTATAAGTTTTTCTTAT+AGG - chr1_2:64090465-64090484 None:intergenic 25.0%
!!! TACCTTATAGTCTGTTTTTT+TGG + chr1_2:64090856-64090875 Msa0084540:intron 25.0%
!!! ACCTTATAGTCTGTTTTTTT+GGG + chr1_2:64090857-64090876 Msa0084540:intron 25.0%
! AACAATATAACCATTGTAAC+AGG + chr1_2:64091064-64091083 Msa0084540:intron 25.0%
!!! GATCTTTCTTTTTTTAGCAT+TGG - chr1_2:64091170-64091189 None:intergenic 25.0%
! CTAAAAAAAGAAAGATCATC+AGG + chr1_2:64091173-64091192 Msa0084540:CDS 25.0%
! GTGATAGTTACAAAAATTGT+AGG - chr1_2:64091266-64091285 None:intergenic 25.0%
! AATACAAATGTAACTAGTGA+AGG - chr1_2:64091311-64091330 None:intergenic 25.0%
!! ATTGAAAAGCATGATCAAAA+GGG - chr1_2:64091336-64091355 None:intergenic 25.0%
! TTTAACCAAGCTATAAAAGA+AGG - chr1_2:64091488-64091507 None:intergenic 25.0%
!!! CTCAAATTATTTTACCAGTA+TGG + chr1_2:64091862-64091881 Msa0084540:three_prime_UTR 25.0%
!! GTGATTTGATTCGAATTAAA+AGG + chr1_2:64091992-64092011 Msa0084540:three_prime_UTR 25.0%
!! GTTTTTCTCCATAAAGAATT+TGG - chr1_2:64092091-64092110 None:intergenic 25.0%
! TACTATGATTTATGTTTGGA+TGG + chr1_2:64092164-64092183 Msa0084540:intron 25.0%
! ACTATGATTTATGTTTGGAT+GGG + chr1_2:64092165-64092184 Msa0084540:intron 25.0%
CAAAGTACAATGAGAATTGA+AGG - chr1_2:64087609-64087628 None:intergenic 30.0%
ATCCTAACTATGAAGAAACA+AGG - chr1_2:64087646-64087665 None:intergenic 30.0%
!!! AATAGTTTTTTCTTGCTCAG+GGG - chr1_2:64087737-64087756 None:intergenic 30.0%
TTGTGATCAATATCCAAACT+TGG - chr1_2:64087853-64087872 None:intergenic 30.0%
TGGATGAGAAGGAATATTAA+TGG - chr1_2:64087878-64087897 None:intergenic 30.0%
! CTATAGCTTTTACTGTTCAT+TGG - chr1_2:64088074-64088093 None:intergenic 30.0%
CAGTAAAAGCTATAGTAAGT+TGG + chr1_2:64088079-64088098 Msa0084540:intron 30.0%
GTAAAAGCTATAGTAAGTTG+GGG + chr1_2:64088081-64088100 Msa0084540:intron 30.0%
CTCTTGATTTCTTAGCTATT+AGG + chr1_2:64088172-64088191 Msa0084540:intron 30.0%
TTGATTTCTTAGCTATTAGG+TGG + chr1_2:64088175-64088194 Msa0084540:intron 30.0%
TTCTCCAAAATATGAAACAC+TGG + chr1_2:64088222-64088241 Msa0084540:intron 30.0%
! ATGACCAGTGTTTCATATTT+TGG - chr1_2:64088229-64088248 None:intergenic 30.0%
! CACATAAATTTCACGTTTTG+TGG - chr1_2:64088457-64088476 None:intergenic 30.0%
!!! GTTTTTCTTTTGGTTTGTCA+TGG - chr1_2:64088603-64088622 None:intergenic 30.0%
GTAACTAGAAAAATCCTCAA+CGG + chr1_2:64088650-64088669 Msa0084540:CDS 30.0%
CATCCAAAAACAATAAACTC+GGG - chr1_2:64089093-64089112 None:intergenic 30.0%
GTATAGGATGTTTGATAAAG+TGG + chr1_2:64089228-64089247 Msa0084540:CDS 30.0%
GGATTAACAAAGTTAAAACC+CGG - chr1_2:64089334-64089353 None:intergenic 30.0%
GCATGCAATTAAGCTAAATA+AGG - chr1_2:64089426-64089445 None:intergenic 30.0%
! GTCTACAATATGATGGAAAT+AGG + chr1_2:64089591-64089610 Msa0084540:intron 30.0%
!!! TTCAAACCTTTGCTCTTTTT+TGG + chr1_2:64089640-64089659 Msa0084540:intron 30.0%
ATAAGTGGAAAGTAAAAGGT+TGG + chr1_2:64089701-64089720 Msa0084540:intron 30.0%
TAAGTGGAAAGTAAAAGGTT+GGG + chr1_2:64089702-64089721 Msa0084540:intron 30.0%
AACAAAATTGACACCCAATT+TGG + chr1_2:64089754-64089773 Msa0084540:intron 30.0%
ACAAAATTGACACCCAATTT+GGG + chr1_2:64089755-64089774 Msa0084540:intron 30.0%
TTACACTTGTCGTTATTTGT+TGG + chr1_2:64089804-64089823 Msa0084540:intron 30.0%
TACACTTGTCGTTATTTGTT+GGG + chr1_2:64089805-64089824 Msa0084540:intron 30.0%
TTTGACAATTTGAAAAGGAC+TGG + chr1_2:64089915-64089934 Msa0084540:intron 30.0%
TTGACAATTTGAAAAGGACT+GGG + chr1_2:64089916-64089935 Msa0084540:intron 30.0%
!! ATGAGTGCTTTTGAAAATTG+AGG + chr1_2:64090028-64090047 Msa0084540:intron 30.0%
CAAGTTGCAATGAAACTATT+AGG - chr1_2:64090111-64090130 None:intergenic 30.0%
GTGGAAACATATTAAAAGCA+TGG + chr1_2:64090260-64090279 Msa0084540:intron 30.0%
! TTAAGACTATGGGATTTTTC+AGG + chr1_2:64090359-64090378 Msa0084540:intron 30.0%
! GAATATCTTCTTTAAGAGCA+GGG - chr1_2:64090484-64090503 None:intergenic 30.0%
! TGAATATCTTCTTTAAGAGC+AGG - chr1_2:64090485-64090504 None:intergenic 30.0%
AATTCAAGGTTCTGCTTAAA+AGG + chr1_2:64090702-64090721 Msa0084540:CDS 30.0%
ATTCAAGGTTCTGCTTAAAA+GGG + chr1_2:64090703-64090722 Msa0084540:CDS 30.0%
TCCCAAAAAAACAGACTATA+AGG - chr1_2:64090861-64090880 None:intergenic 30.0%
! TACATATAAATGATGGAGAC+TGG + chr1_2:64090910-64090929 Msa0084540:intron 30.0%
ATGTGAGACTGATAAGTATT+GGG - chr1_2:64090979-64090998 None:intergenic 30.0%
AATGTGAGACTGATAAGTAT+TGG - chr1_2:64090980-64090999 None:intergenic 30.0%
ATATAACCATTGTAACAGGT+AGG + chr1_2:64091068-64091087 Msa0084540:intron 30.0%
! TATTCTTCTTCTCCATCTTT+TGG + chr1_2:64091096-64091115 Msa0084540:CDS 30.0%
! ATTCTTCTTCTCCATCTTTT+GGG + chr1_2:64091097-64091116 Msa0084540:CDS 30.0%
CAACATAGTATGATGATAGA+TGG - chr1_2:64091205-64091224 None:intergenic 30.0%
TATCATCATACTATGTTGCT+AGG + chr1_2:64091207-64091226 Msa0084540:CDS 30.0%
! TTTTTGTAACTATCACCTAC+TGG + chr1_2:64091270-64091289 Msa0084540:CDS 30.0%
! CATTGAAAAGCATGATCAAA+AGG - chr1_2:64091337-64091356 None:intergenic 30.0%
!!! ATGTTGGTTTTTCTTTTAGC+TGG + chr1_2:64091440-64091459 Msa0084540:CDS 30.0%
! AAATGCCTTCTTTTATAGCT+TGG + chr1_2:64091480-64091499 Msa0084540:CDS 30.0%
AGGTTTATGAATGTAGAGAA+GGG + chr1_2:64091570-64091589 Msa0084540:CDS 30.0%
!! GCATTGACTATAATGTTTGT+TGG + chr1_2:64091665-64091684 Msa0084540:CDS 30.0%
!! TTGTTGCATATTTAGCTTTG+AGG + chr1_2:64091696-64091715 Msa0084540:CDS 30.0%
TTCTAATCCATTAAGTCCTT+AGG - chr1_2:64091739-64091758 None:intergenic 30.0%
GATCTATATTGACACATACA+TGG - chr1_2:64091910-64091929 None:intergenic 30.0%
ATCACCTCTTAATTTAACTG+AGG - chr1_2:64091977-64091996 None:intergenic 30.0%
TCAAATGAACTAACTCTAAC+TGG - chr1_2:64092122-64092141 None:intergenic 30.0%
CTATGATTTATGTTTGGATG+GGG + chr1_2:64092166-64092185 Msa0084540:intron 30.0%
TATGATTTATGTTTGGATGG+GGG + chr1_2:64092167-64092186 Msa0084540:intron 30.0%
ACATGAGAGAAGAGATGTAA+AGG - chr1_2:64087571-64087590 None:intergenic 35.0%
AGTACAATGAGAATTGAAGG+AGG - chr1_2:64087606-64087625 None:intergenic 35.0%
!! AGCCTTGTTTCTTCATAGTT+AGG + chr1_2:64087641-64087660 Msa0084540:five_prime_UTR 35.0%
!!! ATAGTTTTTTCTTGCTCAGG+GGG - chr1_2:64087736-64087755 None:intergenic 35.0%
TTGTTAGAAGAAGAACCATC+TGG - chr1_2:64087823-64087842 None:intergenic 35.0%
GTACTTACTTTGAGTGTAAC+TGG - chr1_2:64087946-64087965 None:intergenic 35.0%
ACCGGAACAATAACTTACAA+CGG + chr1_2:64088782-64088801 Msa0084540:CDS 35.0%
TCCGTTGTAAGTTATTGTTC+CGG - chr1_2:64088786-64088805 None:intergenic 35.0%
TGTAGTTTACCCTCACTTAA+CGG + chr1_2:64088859-64088878 Msa0084540:CDS 35.0%
GAGAGAAAAAGGATGAGTAT+TGG + chr1_2:64089049-64089068 Msa0084540:CDS 35.0%
! GAACCCGAGTTTATTGTTTT+TGG + chr1_2:64089087-64089106 Msa0084540:CDS 35.0%
TAGGATGTTTGATAAAGTGG+TGG + chr1_2:64089231-64089250 Msa0084540:CDS 35.0%
! TCCGATTTATAGTGGTAATG+CGG + chr1_2:64089270-64089289 Msa0084540:CDS 35.0%
TTTCTCCTTGATCTTGCTAA+TGG + chr1_2:64089361-64089380 Msa0084540:CDS 35.0%
ACTTACCATTAGCAAGATCA+AGG - chr1_2:64089369-64089388 None:intergenic 35.0%
AGGTCAAAGAGAAAATCAAC+CGG - chr1_2:64089406-64089425 None:intergenic 35.0%
! AGTAAAAGGTTGGGATTTTG+TGG + chr1_2:64089711-64089730 Msa0084540:intron 35.0%
TTCAGTATCACTCCCAAATT+GGG - chr1_2:64089770-64089789 None:intergenic 35.0%
TTTCAGTATCACTCCCAAAT+TGG - chr1_2:64089771-64089790 None:intergenic 35.0%
AATTTGGGAGTGATACTGAA+AGG + chr1_2:64089770-64089789 Msa0084540:intron 35.0%
ATTTGGGAGTGATACTGAAA+GGG + chr1_2:64089771-64089790 Msa0084540:intron 35.0%
!! TGCTTTTGAAAATTGAGGTG+TGG + chr1_2:64090033-64090052 Msa0084540:intron 35.0%
CATTATGTCTGTCTGAATCT+TGG - chr1_2:64090063-64090082 None:intergenic 35.0%
AGACATAATGATACCATGCA+CGG + chr1_2:64090073-64090092 Msa0084540:intron 35.0%
AATTAGTGACTGTTTCACTG+AGG - chr1_2:64090438-64090457 None:intergenic 35.0%
!!! GTTGCTTTTACTTTAAGGCA+TGG + chr1_2:64090587-64090606 Msa0084540:intron 35.0%
TAGGTTCTTCTGATAACCAA+TGG + chr1_2:64090660-64090679 Msa0084540:intron 35.0%
ATAACCAATGGAACACAAGT+TGG + chr1_2:64090672-64090691 Msa0084540:CDS 35.0%
TTCAAGGTTCTGCTTAAAAG+GGG + chr1_2:64090704-64090723 Msa0084540:CDS 35.0%
TTAAAAGGGGTTTACAAGAG+AGG + chr1_2:64090717-64090736 Msa0084540:CDS 35.0%
ACGTCTTCAATGTGAATTGT+CGG - chr1_2:64090948-64090967 None:intergenic 35.0%
ATTCACATTGAAGACGTGTT+AGG + chr1_2:64090951-64090970 Msa0084540:intron 35.0%
! TTCTTCTTCTCCATCTTTTG+GGG + chr1_2:64091098-64091117 Msa0084540:CDS 35.0%
CAAAGATTGCATTGAAGAGA+GGG - chr1_2:64091130-64091149 None:intergenic 35.0%
ATCATACTATGTTGCTAGGA+TGG + chr1_2:64091211-64091230 Msa0084540:CDS 35.0%
! GATCATGCTTTTCAATGTTC+TGG + chr1_2:64091340-64091359 Msa0084540:CDS 35.0%
AATTCTCATGGATGTTAAGC+AGG + chr1_2:64091394-64091413 Msa0084540:CDS 35.0%
!! TTGGTTTTTCTTTTAGCTGG+TGG + chr1_2:64091443-64091462 Msa0084540:CDS 35.0%
TACTGTTATAAGCTGCTTGT+AGG + chr1_2:64091527-64091546 Msa0084540:CDS 35.0%
ACTGTTATAAGCTGCTTGTA+GGG + chr1_2:64091528-64091547 Msa0084540:CDS 35.0%
GGTTCAGTATTCAGTAAATG+AGG + chr1_2:64091550-64091569 Msa0084540:CDS 35.0%
GAGGTTTATGAATGTAGAGA+AGG + chr1_2:64091569-64091588 Msa0084540:CDS 35.0%
! ACCAAGCTCCAAACATTTTA+CGG - chr1_2:64091624-64091643 None:intergenic 35.0%
! TTTGGAGCTTGGTAATATGT+GGG + chr1_2:64091631-64091650 Msa0084540:CDS 35.0%
!! TGCATATTTAGCTTTGAGGA+TGG + chr1_2:64091700-64091719 Msa0084540:CDS 35.0%
!! GCATATTTAGCTTTGAGGAT+GGG + chr1_2:64091701-64091720 Msa0084540:CDS 35.0%
!! CATATTTAGCTTTGAGGATG+GGG + chr1_2:64091702-64091721 Msa0084540:CDS 35.0%
CATTAAGTCCTTAGGCATTT+AGG - chr1_2:64091731-64091750 None:intergenic 35.0%
CTAAATGCCTAAGGACTTAA+TGG + chr1_2:64091729-64091748 Msa0084540:CDS 35.0%
ACGCATTTAATTCGAAGTGT+TGG - chr1_2:64091773-64091792 None:intergenic 35.0%
TCAGTAACACTAACACATGT+TGG - chr1_2:64091805-64091824 None:intergenic 35.0%
ACTGCCTCAGTTAAATTAAG+AGG + chr1_2:64091970-64091989 Msa0084540:three_prime_UTR 35.0%
TGAGGGAATGTAATGTTATG+AGG + chr1_2:64092197-64092216 Msa0084540:intron 35.0%
GAGGGAATGTAATGTTATGA+GGG + chr1_2:64092198-64092217 Msa0084540:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG + chr1_2:64092216-64092235 Msa0084540:intron 35.0%
TTGAGGTGAATTCCATTGTT+TGG + chr1_2:64092233-64092252 Msa0084540:three_prime_UTR 35.0%
GTGAATTCCATTGTTTGGAT+GGG + chr1_2:64092238-64092257 Msa0084540:three_prime_UTR 35.0%
TGAATTCCATTGTTTGGATG+GGG + chr1_2:64092239-64092258 Msa0084540:three_prime_UTR 35.0%
CTATGAAGAAACAAGGCTAG+AGG - chr1_2:64087639-64087658 None:intergenic 40.0%
! GTGTTGGGTGAGTTGTTATT+TGG - chr1_2:64087766-64087785 None:intergenic 40.0%
AATGATGTGAGTGGTGTAGT+TGG - chr1_2:64087898-64087917 None:intergenic 40.0%
AGAACGGAAAATGATGTGAG+TGG - chr1_2:64087907-64087926 None:intergenic 40.0%
ATTGGTCGCTTATCAACACA+TGG - chr1_2:64088056-64088075 None:intergenic 40.0%
! AAGCTATAGTAAGTTGGGGA+AGG + chr1_2:64088085-64088104 Msa0084540:intron 40.0%
!!! AAACGCAGCCGTTTTTCTTT+TGG - chr1_2:64088613-64088632 None:intergenic 40.0%
! AAAGAAAAACGGCTGCGTTT+TGG + chr1_2:64088613-64088632 Msa0084540:CDS 40.0%
! AAGAAAAACGGCTGCGTTTT+GGG + chr1_2:64088614-64088633 Msa0084540:CDS 40.0%
! TATTGTTCCGGTGACTTTTC+CGG - chr1_2:64088774-64088793 None:intergenic 40.0%
TCCTGCATGAAACGCAAAAT+AGG + chr1_2:64088818-64088837 Msa0084540:CDS 40.0%
! TCCTATTTTGCGTTTCATGC+AGG - chr1_2:64088822-64088841 None:intergenic 40.0%
TTTCCAACACCGTTAAGTGA+GGG - chr1_2:64088871-64088890 None:intergenic 40.0%
!! GAGTATTGGCCAAGAAATGT+TGG + chr1_2:64089063-64089082 Msa0084540:CDS 40.0%
!! TTTTTGGATGAACCGACTTC+CGG + chr1_2:64089103-64089122 Msa0084540:CDS 40.0%
CACGGCTCAACTTATTGTTT+CGG + chr1_2:64089138-64089157 Msa0084540:CDS 40.0%
CTTATTGTTTCGGTTCTTCG+AGG + chr1_2:64089148-64089167 Msa0084540:CDS 40.0%
AGTAGTAACAACTGTTCGAC+CGG - chr1_2:64089185-64089204 None:intergenic 40.0%
CTATTCATCAGCCTTCAAGT+CGG + chr1_2:64089203-64089222 Msa0084540:CDS 40.0%
!! ATCCTATACAACCGACTTGA+AGG - chr1_2:64089217-64089236 None:intergenic 40.0%
!!! AAAGTGGTGGTTTTGTCTGA+TGG + chr1_2:64089244-64089263 Msa0084540:CDS 40.0%
!!! AAGTGGTGGTTTTGTCTGAT+GGG + chr1_2:64089245-64089264 Msa0084540:CDS 40.0%
GATGGGTATCCGATTTATAG+TGG + chr1_2:64089262-64089281 Msa0084540:CDS 40.0%
CCCGCATTACCACTATAAAT+CGG - chr1_2:64089274-64089293 None:intergenic 40.0%
! CCGATTTATAGTGGTAATGC+GGG + chr1_2:64089271-64089290 Msa0084540:CDS 40.0%
! TTTATAGTGGTAATGCGGGT+CGG + chr1_2:64089275-64089294 Msa0084540:CDS 40.0%
! ATGGATTATCTTGGATCCGT+TGG + chr1_2:64089301-64089320 Msa0084540:CDS 40.0%
TGGATTATCTTGGATCCGTT+GGG + chr1_2:64089302-64089321 Msa0084540:CDS 40.0%
AGATCAAGGAGAAAATCAGC+AGG - chr1_2:64089355-64089374 None:intergenic 40.0%
TTTGGGAGTGATACTGAAAG+GGG + chr1_2:64089772-64089791 Msa0084540:intron 40.0%
! TGTCGTTATTTGTTGGGTGA+AGG + chr1_2:64089811-64089830 Msa0084540:intron 40.0%
!! GAGGTGCTGAAAAAAGATTG+AGG + chr1_2:64089868-64089887 Msa0084540:intron 40.0%
GAAAAGATAGATTCCGTGCA+TGG - chr1_2:64090089-64090108 None:intergenic 40.0%
!! AGGAGGCATGAATCTTTTTC+TGG + chr1_2:64090737-64090756 Msa0084540:CDS 40.0%
GAATGGAAACAGACAAGACT+TGG - chr1_2:64090775-64090794 None:intergenic 40.0%
TTGTCTGTTTCCATTCTCTC+AGG + chr1_2:64090779-64090798 Msa0084540:CDS 40.0%
ACCTGATCTTGTATGTGTGA+GGG - chr1_2:64090827-64090846 None:intergenic 40.0%
TACCTGATCTTGTATGTGTG+AGG - chr1_2:64090828-64090847 None:intergenic 40.0%
AGAAGTCCTACCTGTTACAA+TGG - chr1_2:64091077-64091096 None:intergenic 40.0%
GCAAAGATTGCATTGAAGAG+AGG - chr1_2:64091131-64091150 None:intergenic 40.0%
!! TTTAGCATTGGTCTATCCAG+CGG - chr1_2:64091158-64091177 None:intergenic 40.0%
TACTATGTTGCTAGGATGGT+AGG + chr1_2:64091215-64091234 Msa0084540:CDS 40.0%
TGTAACTATCACCTACTGGA+TGG + chr1_2:64091274-64091293 Msa0084540:CDS 40.0%
GTAACTATCACCTACTGGAT+GGG + chr1_2:64091275-64091294 Msa0084540:CDS 40.0%
TTCAATGTTCTGGTCTCTCA+AGG + chr1_2:64091350-64091369 Msa0084540:CDS 40.0%
! TCTAGCTTCAGTGACAATGT+TGG + chr1_2:64091424-64091443 Msa0084540:CDS 40.0%
CTGTTATAAGCTGCTTGTAG+GGG + chr1_2:64091529-64091548 Msa0084540:CDS 40.0%
TAGAGAAGGGTTGCATTGTA+GGG + chr1_2:64091583-64091602 Msa0084540:CDS 40.0%
TTTCCCTGCCGTAAAATGTT+TGG + chr1_2:64091613-64091632 Msa0084540:CDS 40.0%
! GTTTGGAGCTTGGTAATATG+TGG + chr1_2:64091630-64091649 Msa0084540:CDS 40.0%
! TTGGAGCTTGGTAATATGTG+GGG + chr1_2:64091632-64091651 Msa0084540:CDS 40.0%
! TTAGTGTTACTGACACGACA+CGG + chr1_2:64091812-64091831 Msa0084540:three_prime_UTR 40.0%
ACACATACATGGCTCAACAT+CGG - chr1_2:64091899-64091918 None:intergenic 40.0%
GGTGAATTCCATTGTTTGGA+TGG + chr1_2:64092237-64092256 Msa0084540:three_prime_UTR 40.0%
GAATTCCATTGTTTGGATGG+GGG + chr1_2:64092240-64092259 Msa0084540:three_prime_UTR 40.0%
CTCACCCAACACAAACAGAA+CGG + chr1_2:64087774-64087793 Msa0084540:CDS 45.0%
CTCTCCGTTCTGTTTGTGTT+GGG - chr1_2:64087781-64087800 None:intergenic 45.0%
! AAGAACCATCTGGTTCACCA+TGG - chr1_2:64087813-64087832 None:intergenic 45.0%
AGTGGTGTAGTTGGATGAGA+AGG - chr1_2:64087889-64087908 None:intergenic 45.0%
TCGCAACGATTGAGGAAGAA+CGG - chr1_2:64087923-64087942 None:intergenic 45.0%
AAAATCCTCAACGGAGTCAC+CGG + chr1_2:64088659-64088678 Msa0084540:CDS 45.0%
! AGCATTGCTGTTAACTCTCC+CGG - chr1_2:64088695-64088714 None:intergenic 45.0%
GGAGAGTTAACAGCAATGCT+AGG + chr1_2:64088695-64088714 Msa0084540:CDS 45.0%
TTACCCTCACTTAACGGTGT+TGG + chr1_2:64088865-64088884 Msa0084540:CDS 45.0%
GTTTCCAACACCGTTAAGTG+AGG - chr1_2:64088872-64088891 None:intergenic 45.0%
TCTTCACGCGTAAGTGTCTT+GGG - chr1_2:64088923-64088942 None:intergenic 45.0%
TTCTTCACGCGTAAGTGTCT+TGG - chr1_2:64088924-64088943 None:intergenic 45.0%
GACACTTACGCGTGAAGAAA+AGG + chr1_2:64088925-64088944 Msa0084540:CDS 45.0%
TGAAGAAAAGGTCGAACACG+CGG + chr1_2:64088937-64088956 Msa0084540:CDS 45.0%
! GAGGATGTATGGGACTTTTC+CGG + chr1_2:64089011-64089030 Msa0084540:CDS 45.0%
! AGGATGTATGGGACTTTTCC+GGG + chr1_2:64089012-64089031 Msa0084540:CDS 45.0%
TCGGGTTCACCAACATTTCT+TGG - chr1_2:64089075-64089094 None:intergenic 45.0%
! CGAAACAATAAGTTGAGCCG+TGG - chr1_2:64089140-64089159 None:intergenic 45.0%
TGTTTCGGTTCTTCGAGGTT+TGG + chr1_2:64089153-64089172 Msa0084540:CDS 45.0%
AGCCTTCAAGTCGGTTGTAT+AGG + chr1_2:64089212-64089231 Msa0084540:CDS 45.0%
! TTATAGTGGTAATGCGGGTC+GGG + chr1_2:64089276-64089295 Msa0084540:CDS 45.0%
!! GGTCGGGTAATGGATTATCT+TGG + chr1_2:64089292-64089311 Msa0084540:CDS 45.0%
AAAACCCGGAACAAACCCAA+CGG - chr1_2:64089320-64089339 None:intergenic 45.0%
TTGGGAGTGATACTGAAAGG+GGG + chr1_2:64089773-64089792 Msa0084540:intron 45.0%
GCACATTAACACTGAACCAC+TGG + chr1_2:64090505-64090524 Msa0084540:CDS 45.0%
CCTCTTGATGCAAAAACCAG+TGG - chr1_2:64090524-64090543 None:intergenic 45.0%
!!! CCACTGGTTTTTGCATCAAG+AGG + chr1_2:64090521-64090540 Msa0084540:CDS 45.0%
! ACCAATGGAACACAAGTTGG+TGG + chr1_2:64090675-64090694 Msa0084540:CDS 45.0%
!! CCAATGGAACACAAGTTGGT+GGG + chr1_2:64090676-64090695 Msa0084540:CDS 45.0%
!! AAGTTGGTGGGAGCAATTCA+AGG + chr1_2:64090688-64090707 Msa0084540:CDS 45.0%
AAAGGGGTTTACAAGAGAGG+AGG + chr1_2:64090720-64090739 Msa0084540:CDS 45.0%
TCCCTCACACATACAAGATC+AGG + chr1_2:64090823-64090842 Msa0084540:CDS 45.0%
AGGGAAGAATCCCCAAAAGA+TGG - chr1_2:64091111-64091130 None:intergenic 45.0%
TGCAATCTTTGCATTTCCGC+TGG + chr1_2:64091139-64091158 Msa0084540:CDS 45.0%
GATGGTAGGAGACTTACCAA+TGG + chr1_2:64091229-64091248 Msa0084540:CDS 45.0%
GTAGGAAGAACAAGCTCCAT+TGG - chr1_2:64091248-64091267 None:intergenic 45.0%
GTTCTGGTCTCTCAAGGAAT+AGG + chr1_2:64091356-64091375 Msa0084540:CDS 45.0%
CAAGGAATAGGCTTAGCACT+TGG + chr1_2:64091368-64091387 Msa0084540:CDS 45.0%
!! AGCACTTGGTGCAATTCTCA+TGG + chr1_2:64091382-64091401 Msa0084540:CDS 45.0%
GTAGAGAAGGGTTGCATTGT+AGG + chr1_2:64091582-64091601 Msa0084540:CDS 45.0%
! GCTCCAAACATTTTACGGCA+GGG - chr1_2:64091619-64091638 None:intergenic 45.0%
! AGCTCCAAACATTTTACGGC+AGG - chr1_2:64091620-64091639 None:intergenic 45.0%
! GCCGTAAAATGTTTGGAGCT+TGG + chr1_2:64091620-64091639 Msa0084540:CDS 45.0%
TGGTAATATGTGGGGAGATG+TGG + chr1_2:64091640-64091659 Msa0084540:CDS 45.0%
CTAACTCTAACTGGCACATC+TGG - chr1_2:64092113-64092132 None:intergenic 45.0%
! TTGGATGGGGGAATGTTTTG+AGG + chr1_2:64092179-64092198 Msa0084540:intron 45.0%
!! TGGATGGGGGAATGTTTTGA+GGG + chr1_2:64092180-64092199 Msa0084540:intron 45.0%
ACATTCCCCCATCCAAACAA+TGG - chr1_2:64092248-64092267 None:intergenic 45.0%
!!! CTTTTATATTTAATAATTTA+GGG + chr1_2:64089478-64089497 Msa0084540:intron 5.0%
!! TGTTAAATAATTAATAATAA+AGG + chr1_2:64089846-64089865 Msa0084540:intron 5.0%
GCTCTCCGTTCTGTTTGTGT+TGG - chr1_2:64087782-64087801 None:intergenic 50.0%
TCCATCCATGGTGAACCAGA+TGG + chr1_2:64087805-64087824 Msa0084540:CDS 50.0%
! ACCATCTGGTTCACCATGGA+TGG - chr1_2:64087809-64087828 None:intergenic 50.0%
GTAACTGGTCGCAACGATTG+AGG - chr1_2:64087931-64087950 None:intergenic 50.0%
CGGCAAAACCACCCTACTAA+CGG + chr1_2:64088730-64088749 Msa0084540:CDS 50.0%
! GACTTTTCCGGCAAGTCTTC+CGG - chr1_2:64088762-64088781 None:intergenic 50.0%
AGACTTGCCGGAAAAGTCAC+CGG + chr1_2:64088764-64088783 Msa0084540:CDS 50.0%
! AAGTCTCAAGAGTGCGGTGT+AGG - chr1_2:64088900-64088919 None:intergenic 50.0%
CTTGGGAAGTCTCAAGAGTG+CGG - chr1_2:64088906-64088925 None:intergenic 50.0%
GAGAGGATAATCACCGAGCT+TGG + chr1_2:64088959-64088978 Msa0084540:CDS 50.0%
ACTCCGGTTGGAGGATGTAT+GGG + chr1_2:64089001-64089020 Msa0084540:CDS 50.0%
AGTCCCATACATCCTCCAAC+CGG - chr1_2:64089007-64089026 None:intergenic 50.0%
! GGATGTATGGGACTTTTCCG+GGG + chr1_2:64089013-64089032 Msa0084540:CDS 50.0%
! CATCCTTTTTCTCTCCCCAC+CGG - chr1_2:64089044-64089063 None:intergenic 50.0%
GTTGAGTCCAAACCGGAAGT+CGG - chr1_2:64089118-64089137 None:intergenic 50.0%
!! TTCCGGTTTGGACTCAACCA+CGG + chr1_2:64089120-64089139 Msa0084540:CDS 50.0%
! TGGATCCGTTGGGTTTGTTC+CGG + chr1_2:64089312-64089331 Msa0084540:CDS 50.0%
CCCACCAACTTGTGTTCCAT+TGG - chr1_2:64090679-64090698 None:intergenic 50.0%
ACTATCACCTACTGGATGGG+TGG + chr1_2:64091278-64091297 Msa0084540:CDS 50.0%
CTTAAGACCACCCATCCAGT+AGG - chr1_2:64091288-64091307 None:intergenic 50.0%
CGGCACTTACACTTCCATAC+TGG - chr1_2:64091879-64091898 None:intergenic 50.0%
ACGGAGAGCAACTCCATCCA+TGG + chr1_2:64087793-64087812 Msa0084540:CDS 55.0%
ACAGCAATGCTAGGACCCTC+AGG + chr1_2:64088704-64088723 Msa0084540:CDS 55.0%
CAGCAATGCTAGGACCCTCA+GGG + chr1_2:64088705-64088724 Msa0084540:CDS 55.0%
AAAAGGTCGAACACGCGGAG+AGG + chr1_2:64088942-64088961 Msa0084540:CDS 55.0%
!! TCACCGAGCTTGGCCTTACA+CGG + chr1_2:64088969-64088988 Msa0084540:CDS 55.0%
! ATCCTCCAACCGGAGTGTTC+CGG - chr1_2:64088997-64089016 None:intergenic 55.0%
CACTCCGGTTGGAGGATGTA+TGG + chr1_2:64089000-64089019 Msa0084540:CDS 55.0%
! GGACTTTTCCGGGGAATCTC+CGG + chr1_2:64089022-64089041 Msa0084540:CDS 55.0%
! TTTTCCGGGGAATCTCCGGT+GGG + chr1_2:64089026-64089045 Msa0084540:CDS 55.0%
TCTCCGGTGGGGAGAGAAAA+AGG + chr1_2:64089038-64089057 Msa0084540:CDS 55.0%
! GGATGAACCGACTTCCGGTT+TGG + chr1_2:64089108-64089127 Msa0084540:CDS 55.0%
AGCCGTGGTTGAGTCCAAAC+CGG - chr1_2:64089125-64089144 None:intergenic 55.0%
CGGTTCTTCGAGGTTTGGCT+CGG + chr1_2:64089158-64089177 Msa0084540:CDS 55.0%
! TGGTAATGCGGGTCGGGTAA+TGG + chr1_2:64089282-64089301 Msa0084540:CDS 55.0%
! GGATCCGTTGGGTTTGTTCC+GGG + chr1_2:64089313-64089332 Msa0084540:CDS 55.0%
CCAGAGGAGTCCTGAGAGAA+TGG - chr1_2:64090792-64090811 None:intergenic 55.0%
CCATTCTCTCAGGACTCCTC+TGG + chr1_2:64090789-64090808 Msa0084540:CDS 55.0%
TTCTCTCAGGACTCCTCTGG+TGG + chr1_2:64090792-64090811 Msa0084540:CDS 55.0%
TGGGGCAGCCTAAATGCCTA+AGG + chr1_2:64091720-64091739 Msa0084540:CDS 55.0%
AGTCACCGGAGTGGCAAGAC+CGG + chr1_2:64088673-64088692 Msa0084540:CDS 60.0%
ATGCTAGGACCCTCAGGGAG+CGG + chr1_2:64088710-64088729 Msa0084540:CDS 60.0%
!! GTGGTTTTGCCGCTCCCTGA+GGG - chr1_2:64088722-64088741 None:intergenic 60.0%
ACCCTACTAACGGCCCTAGC+CGG + chr1_2:64088740-64088759 Msa0084540:CDS 60.0%
TCCGGCTAGGGCCGTTAGTA+GGG - chr1_2:64088744-64088763 None:intergenic 60.0%
TTCCGGCTAGGGCCGTTAGT+AGG - chr1_2:64088745-64088764 None:intergenic 60.0%
TCCGGCAAGTCTTCCGGCTA+GGG - chr1_2:64088756-64088775 None:intergenic 60.0%
TTCCGGCAAGTCTTCCGGCT+AGG - chr1_2:64088757-64088776 None:intergenic 60.0%
GCACCGTGTAAGGCCAAGCT+CGG - chr1_2:64088975-64088994 None:intergenic 60.0%
!! AGCTTGGCCTTACACGGTGC+CGG + chr1_2:64088975-64088994 Msa0084540:CDS 60.0%
GAGTGTTCCGGCACCGTGTA+AGG - chr1_2:64088985-64089004 None:intergenic 60.0%
! TACACGGTGCCGGAACACTC+CGG + chr1_2:64088985-64089004 Msa0084540:CDS 60.0%
! CTTTTCCGGGGAATCTCCGG+TGG + chr1_2:64089025-64089044 Msa0084540:CDS 60.0%
TTTCCGGGGAATCTCCGGTG+GGG + chr1_2:64089027-64089046 Msa0084540:CDS 60.0%
!! CTTCGAGGTTTGGCTCGGTC+CGG + chr1_2:64089163-64089182 Msa0084540:CDS 60.0%
! AGGGATCAGAGTGCCACCAG+AGG - chr1_2:64090808-64090827 None:intergenic 60.0%
CCACTCCGGTGACTCCGTTG+AGG - chr1_2:64088667-64088686 None:intergenic 65.0%
CCTCAACGGAGTCACCGGAG+TGG + chr1_2:64088664-64088683 Msa0084540:CDS 65.0%
GTCACCGGAGTGGCAAGACC+GGG + chr1_2:64088674-64088693 Msa0084540:CDS 65.0%
CTCTCCCGGTCTTGCCACTC+CGG - chr1_2:64088681-64088700 None:intergenic 65.0%
!! GGTGGTTTTGCCGCTCCCTG+AGG - chr1_2:64088723-64088742 None:intergenic 65.0%
GGCTAGGGCCGTTAGTAGGG+TGG - chr1_2:64088741-64088760 None:intergenic 65.0%
GCCCTAGCCGGAAGACTTGC+CGG + chr1_2:64088752-64088771 Msa0084540:CDS 65.0%
TGCCGGAACACTCCGGTTGG+AGG + chr1_2:64088992-64089011 Msa0084540:CDS 65.0%
TCTCCCCACCGGAGATTCCC+CGG - chr1_2:64089033-64089052 None:intergenic 65.0%
! CGGTGCCGGAACACTCCGGT+TGG + chr1_2:64088989-64089008 Msa0084540:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 64087530 64092267 64087530 ID=Msa0084540;Name=Msa0084540
chr1_2 mRNA 64087530 64092267 64087530 ID=Msa0084540-mRNA-1;Parent=Msa0084540;Name=Msa0084540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=197|1|1|1|0.8|0.66|6|481|685
chr1_2 exon 64087530 64087957 64087530 ID=Msa0084540-mRNA-1:exon:21535;Parent=Msa0084540-mRNA-1
chr1_2 exon 64088575 64089382 64088575 ID=Msa0084540-mRNA-1:exon:21536;Parent=Msa0084540-mRNA-1
chr1_2 exon 64090381 64090554 64090381 ID=Msa0084540-mRNA-1:exon:21537;Parent=Msa0084540-mRNA-1
chr1_2 exon 64090663 64090844 64090663 ID=Msa0084540-mRNA-1:exon:21538;Parent=Msa0084540-mRNA-1
chr1_2 exon 64091086 64092180 64091086 ID=Msa0084540-mRNA-1:exon:21539;Parent=Msa0084540-mRNA-1
chr1_2 exon 64092219 64092267 64092219 ID=Msa0084540-mRNA-1:exon:21540;Parent=Msa0084540-mRNA-1
chr1_2 five_prime_UTR 64087530 64087726 64087530 ID=Msa0084540-mRNA-1:five_prime_utr;Parent=Msa0084540-mRNA-1
chr1_2 CDS 64087727 64087957 64087727 ID=Msa0084540-mRNA-1:cds;Parent=Msa0084540-mRNA-1
chr1_2 CDS 64088575 64089382 64088575 ID=Msa0084540-mRNA-1:cds;Parent=Msa0084540-mRNA-1
chr1_2 CDS 64090381 64090554 64090381 ID=Msa0084540-mRNA-1:cds;Parent=Msa0084540-mRNA-1
chr1_2 CDS 64090663 64090844 64090663 ID=Msa0084540-mRNA-1:cds;Parent=Msa0084540-mRNA-1
chr1_2 CDS 64091086 64091748 64091086 ID=Msa0084540-mRNA-1:cds;Parent=Msa0084540-mRNA-1
chr1_2 three_prime_UTR 64091749 64092180 64091749 ID=Msa0084540-mRNA-1:three_prime_utr;Parent=Msa0084540-mRNA-1
chr1_2 three_prime_UTR 64092219 64092267 64092219 ID=Msa0084540-mRNA-1:three_prime_utr;Parent=Msa0084540-mRNA-1
Gene Sequence

>Msa0084540

ATGATGCCCCCTGAGCAAGAAAAAACTATTAATGCACCAAATAACAACTCACCCAACACAAACAGAACGGAGAGCAACTCCATCCATGGTGAACCAGATGGTTCTTCTTCTAACAAAGTTAAACCAAGTTTGGATATTGATCACAACGCCATTAATATTCCTTCTCATCCAACTACACCACTCACATCATTTTCCGTTCTTCCTCAATCGTTGCGACCAGTTACACTCAAATTTGAAGATGTTTCATACAGCATAACCATGACAAACCAAAAGAAAAACGGCTGCGTTTTGGGCAAAGAATCAAAAGTAACTAGAAAAATCCTCAACGGAGTCACCGGAGTGGCAAGACCGGGAGAGTTAACAGCAATGCTAGGACCCTCAGGGAGCGGCAAAACCACCCTACTAACGGCCCTAGCCGGAAGACTTGCCGGAAAAGTCACCGGAACAATAACTTACAACGGAAACTCAGACTCATCCTGCATGAAACGCAAAATAGGATTTGTTTCTCAAGACGATGTAGTTTACCCTCACTTAACGGTGTTGGAAACATTAACCTACACCGCACTCTTGAGACTTCCCAAGACACTTACGCGTGAAGAAAAGGTCGAACACGCGGAGAGGATAATCACCGAGCTTGGCCTTACACGGTGCCGGAACACTCCGGTTGGAGGATGTATGGGACTTTTCCGGGGAATCTCCGGTGGGGAGAGAAAAAGGATGAGTATTGGCCAAGAAATGTTGGTGAACCCGAGTTTATTGTTTTTGGATGAACCGACTTCCGGTTTGGACTCAACCACGGCTCAACTTATTGTTTCGGTTCTTCGAGGTTTGGCTCGGTCCGGTCGAACAGTTGTTACTACTATTCATCAGCCTTCAAGTCGGTTGTATAGGATGTTTGATAAAGTGGTGGTTTTGTCTGATGGGTATCCGATTTATAGTGGTAATGCGGGTCGGGTAATGGATTATCTTGGATCCGTTGGGTTTGTTCCGGGTTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGATCTTGCTAATGGCATAGTTGCTGATGTTAAACATGATGAGATAGAGCAGCATGATCATGATCAAGCCTCAGTGAAACAGTCACTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCACATTAACACTGAACCACTGGTTTTTGCATCAAGAGGAACATCTAGACGTTCTTCTGATAACCAATGGAACACAAGTTGGTGGGAGCAATTCAAGGTTCTGCTTAAAAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGTTTAAAGATTTTCCAAGTCTTGTCTGTTTCCATTCTCTCAGGACTCCTCTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTTCTATTCTTCTTCTCCATCTTTTGGGGATTCTTCCCTCTCTTCAATGCAATCTTTGCATTTCCGCTGGATAGACCAATGCTAAAAAAAGAAAGATCATCAGGGATGTACCATCTATCATCATACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACAATTTTTGTAACTATCACCTACTGGATGGGTGGTCTTAAGCCTTCACTAGTTACATTTGTATTAACCCTTTTGATCATGCTTTTCAATGTTCTGGTCTCTCAAGGAATAGGCTTAGCACTTGGTGCAATTCTCATGGATGTTAAGCAGGCAACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGTTACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGTTAAAGTACTTTTCTTTCAGTCATTACTGTTATAAGCTGCTTGTAGGGGTTCAGTATTCAGTAAATGAGGTTTATGAATGTAGAGAAGGGTTGCATTGTAGGGCAAGAGATTTCCCTGCCGTAAAATGTTTGGAGCTTGGTAATATGTGGGGAGATGTGGCTGCATTGACTATAATGTTTGTTGGATACAGAGTTGTTGCATATTTAGCTTTGAGGATGGGGCAGCCTAAATGCCTAAGGACTTAA
Protein sequence

>Msa0084540

MMPPEQEKTINAPNNNSPNTNRTESNSIHGEPDGSSSNKVKPSLDIDHNAINIPSHPTTPLTSFSVLPQSLRPVTLKFEDVSYSITMTNQKKNGCVLGKESKVTRKILNGVTGVARPGELTAMLGPSGSGKTTLLTALAGRLAGKVTGTITYNGNSDSSCMKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTREEKVEHAERIITELGLTRCRNTPVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLFLDEPTSGLDSTTAQLIVSVLRGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIVADVKHDEIEQHDHDQASVKQSLISSYKKNLYPALKEDIQHINTEPLVFASRGTSRRSSDNQWNTSWWEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEVYECREGLHCRARDFPAVKCLELGNMWGDVAALTIMFVGYRVVAYLALRMGQPKCLRT*