Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132950 | AEE00202.1 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132950 | sp|A7VLV1|SGRW_PEA | 86.364 | 264 | 29 | 3 | 1 | 262 | 1 | 259 | 1.86e-166 | 463 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132950 | F8TCY0 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008050 | Msa1132950 | 0.853225 | 2.751371e-61 | -8.615850e-47 |
| Msa0034310 | Msa1132950 | -0.807144 | 5.833250e-50 | -8.615850e-47 |
| Msa0036470 | Msa1132950 | 0.800948 | 1.134117e-48 | -8.615850e-47 |
| Msa0051460 | Msa1132950 | 0.808853 | 2.524616e-50 | -8.615850e-47 |
| Msa0057520 | Msa1132950 | 0.804806 | 1.810323e-49 | -8.615850e-47 |
| Msa0071550 | Msa1132950 | 0.806181 | 9.318648e-50 | -8.615850e-47 |
| Msa0081310 | Msa1132950 | -0.800147 | 1.651914e-48 | -8.615850e-47 |
| Msa0084540 | Msa1132950 | 0.802534 | 5.359197e-49 | -8.615850e-47 |
| Msa0094940 | Msa1132950 | -0.805022 | 1.631202e-49 | -8.615850e-47 |
| Msa0105340 | Msa1132950 | 0.809257 | 2.068951e-50 | -8.615850e-47 |
| Msa0616910 | Msa1132950 | 0.822246 | 2.625467e-53 | -8.615850e-47 |
| Msa0621750 | Msa1132950 | -0.812850 | 3.445434e-51 | -8.615850e-47 |
| Msa0626230 | Msa1132950 | 0.841179 | 5.559999e-58 | -8.615850e-47 |
| Msa0640380 | Msa1132950 | 0.870125 | 1.848289e-66 | -8.615850e-47 |
| Msa0647830 | Msa1132950 | 0.801237 | 9.900984e-49 | -8.615850e-47 |
| Msa0651190 | Msa1132950 | 0.806560 | 7.752508e-50 | -8.615850e-47 |
| Msa0651790 | Msa1132950 | 0.815965 | 7.053792e-52 | -8.615850e-47 |
| Msa0667890 | Msa1132950 | 0.801252 | 9.829098e-49 | -8.615850e-47 |
| Msa0678820 | Msa1132950 | 0.848851 | 4.708781e-60 | -8.615850e-47 |
| Msa0690440 | Msa1132950 | 0.804366 | 2.236052e-49 | -8.615850e-47 |
| Msa0697140 | Msa1132950 | 0.815296 | 9.944082e-52 | -8.615850e-47 |
| Msa0699460 | Msa1132950 | 0.813957 | 1.967417e-51 | -8.615850e-47 |
| Msa0700070 | Msa1132950 | 0.800854 | 1.185630e-48 | -8.615850e-47 |
| Msa0714340 | Msa1132950 | 0.819822 | 9.490746e-53 | -8.615850e-47 |
| Msa0714380 | Msa1132950 | 0.816520 | 5.301647e-52 | -8.615850e-47 |
| Msa0715720 | Msa1132950 | 0.808091 | 3.672465e-50 | -8.615850e-47 |
| Msa0722930 | Msa1132950 | 0.856991 | 2.211711e-62 | -8.615850e-47 |
| Msa0723140 | Msa1132950 | 0.848898 | 4.570082e-60 | -8.615850e-47 |
| Msa0749930 | Msa1132950 | 0.807828 | 4.176919e-50 | -8.615850e-47 |
| Msa0753980 | Msa1132950 | 0.833068 | 6.594468e-56 | -8.615850e-47 |
| Msa0756310 | Msa1132950 | 0.808531 | 2.958630e-50 | -8.615850e-47 |
| Msa0756800 | Msa1132950 | -0.811395 | 7.152852e-51 | -8.615850e-47 |
| Msa0767080 | Msa1132950 | 0.805681 | 1.187255e-49 | -8.615850e-47 |
| Msa0807050 | Msa1132950 | 0.993914 | 3.670262e-203 | -8.615850e-47 |
| Msa0830420 | Msa1132950 | 0.804087 | 2.556424e-49 | -8.615850e-47 |
| Msa0832990 | Msa1132950 | 0.993815 | 2.004382e-202 | -8.615850e-47 |
| Msa0835730 | Msa1132950 | 0.819837 | 9.415555e-53 | -8.615850e-47 |
| Msa0124110 | Msa1132950 | 0.815481 | 9.045384e-52 | -8.615850e-47 |
| Msa0128320 | Msa1132950 | -0.847204 | 1.340782e-59 | -8.615850e-47 |
| Msa0143920 | Msa1132950 | 0.800676 | 1.288979e-48 | -8.615850e-47 |
| Msa0149360 | Msa1132950 | 0.819482 | 1.135155e-52 | -8.615850e-47 |
| Msa0200370 | Msa1132950 | 0.840626 | 7.765991e-58 | -8.615850e-47 |
| Msa0200870 | Msa1132950 | 0.818285 | 2.123482e-52 | -8.615850e-47 |
| Msa0205400 | Msa1132950 | 0.815372 | 9.564496e-52 | -8.615850e-47 |
| Msa0222340 | Msa1132950 | 0.836102 | 1.139247e-56 | -8.615850e-47 |
| Msa0371420 | Msa1132950 | -0.837787 | 4.229662e-57 | -8.615850e-47 |
| Msa0379820 | Msa1132950 | 0.832014 | 1.203829e-55 | -8.615850e-47 |
| Msa0379850 | Msa1132950 | 0.835255 | 1.865951e-56 | -8.615850e-47 |
| Msa0385920 | Msa1132950 | 0.801404 | 9.150420e-49 | -8.615850e-47 |
| Msa0389810 | Msa1132950 | 0.801921 | 7.168692e-49 | -8.615850e-47 |
| Msa0401570 | Msa1132950 | 0.823844 | 1.113144e-53 | -8.615850e-47 |
| Msa0411000 | Msa1132950 | 0.833108 | 6.444939e-56 | -8.615850e-47 |
| Msa0419620 | Msa1132950 | -0.861688 | 8.607125e-64 | -8.615850e-47 |
| Msa0429170 | Msa1132950 | 0.842147 | 3.087653e-58 | -8.615850e-47 |
| Msa0438050 | Msa1132950 | 0.826121 | 3.228203e-54 | -8.615850e-47 |
| Msa0448400 | Msa1132950 | 0.810306 | 1.231020e-50 | -8.615850e-47 |
| Msa0455230 | Msa1132950 | 0.843186 | 1.635629e-58 | -8.615850e-47 |
| Msa0462380 | Msa1132950 | 0.835451 | 1.665648e-56 | -8.615850e-47 |
| Msa0462420 | Msa1132950 | 0.833247 | 5.952081e-56 | -8.615850e-47 |
| Msa0462470 | Msa1132950 | 0.827073 | 1.913571e-54 | -8.615850e-47 |
| Msa0465680 | Msa1132950 | -0.865987 | 3.960962e-65 | -8.615850e-47 |
| Msa0467740 | Msa1132950 | -0.803581 | 3.255339e-49 | -8.615850e-47 |
| Msa0482190 | Msa1132950 | -0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0982270 | Msa1132950 | 0.805046 | 1.612635e-49 | -8.615850e-47 |
| Msa1000020 | Msa1132950 | 0.837491 | 5.037786e-57 | -8.615850e-47 |
| Msa1031810 | Msa1132950 | 0.826574 | 2.517826e-54 | -8.615850e-47 |
| Msa1034710 | Msa1132950 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa1055430 | Msa1132950 | 0.808803 | 2.587552e-50 | -8.615850e-47 |
| Msa1068200 | Msa1132950 | -0.803775 | 2.967188e-49 | -8.615850e-47 |
| Msa1070850 | Msa1132950 | 0.848174 | 7.249116e-60 | -8.615850e-47 |
| Msa1075080 | Msa1132950 | -0.839553 | 1.479411e-57 | -8.615850e-47 |
| Msa1080770 | Msa1132950 | 0.831404 | 1.701676e-55 | -8.615850e-47 |
| Msa1080790 | Msa1132950 | 0.900507 | 6.839105e-78 | -8.615850e-47 |
| Msa1082310 | Msa1132950 | 0.801268 | 9.755091e-49 | -8.615850e-47 |
| Msa1092090 | Msa1132950 | 0.807931 | 3.971632e-50 | -8.615850e-47 |
| Msa0243470 | Msa1132950 | 0.825828 | 3.788154e-54 | -8.615850e-47 |
| Msa0243820 | Msa1132950 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0248600 | Msa1132950 | 0.813850 | 2.076839e-51 | -8.615850e-47 |
| Msa0260270 | Msa1132950 | -0.830321 | 3.137408e-55 | -8.615850e-47 |
| Msa0263840 | Msa1132950 | 0.822420 | 2.391272e-53 | -8.615850e-47 |
| Msa0281270 | Msa1132950 | 0.835911 | 1.273605e-56 | -8.615850e-47 |
| Msa0281940 | Msa1132950 | 0.823958 | 1.046392e-53 | -8.615850e-47 |
| Msa0282500 | Msa1132950 | 0.821715 | 3.484177e-53 | -8.615850e-47 |
| Msa0286860 | Msa1132950 | 0.834441 | 2.991359e-56 | -8.615850e-47 |
| Msa0286880 | Msa1132950 | 0.850989 | 1.188129e-60 | -8.615850e-47 |
| Msa0301680 | Msa1132950 | 0.829088 | 6.259770e-55 | -8.615850e-47 |
| Msa0304270 | Msa1132950 | -0.810380 | 1.186400e-50 | -8.615850e-47 |
| Msa0304310 | Msa1132950 | -0.806212 | 9.177461e-50 | -8.615850e-47 |
| Msa0309550 | Msa1132950 | 0.812315 | 4.508913e-51 | -8.615850e-47 |
| Msa0320440 | Msa1132950 | 0.832078 | 1.160463e-55 | -8.615850e-47 |
| Msa0325510 | Msa1132950 | 0.816354 | 5.773677e-52 | -8.615850e-47 |
| Msa0339070 | Msa1132950 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa0342340 | Msa1132950 | -0.801129 | 1.041447e-48 | -8.615850e-47 |
| Msa0358730 | Msa1132950 | 0.801149 | 1.031610e-48 | -8.615850e-47 |
| Msa0363460 | Msa1132950 | 0.844175 | 8.895415e-59 | -8.615850e-47 |
| Msa1118750 | Msa1132950 | 0.852491 | 4.459663e-61 | -8.615850e-47 |
| Msa1118930 | Msa1132950 | 0.898531 | 4.845399e-77 | -8.615850e-47 |
| Msa1124540 | Msa1132950 | -0.809695 | 1.666490e-50 | -8.615850e-47 |
| Msa1132950 | Msa1143270 | 0.806521 | 7.900970e-50 | -8.615850e-47 |
| Msa1132950 | Msa1156340 | -0.803147 | 4.005034e-49 | -8.615850e-47 |
| Msa1132950 | Msa1158670 | 0.837994 | 3.742676e-57 | -8.615850e-47 |
| Msa1132950 | Msa1203360 | 0.801406 | 9.139555e-49 | -8.615850e-47 |
| Msa1132950 | Msa1203380 | 0.818642 | 1.762118e-52 | -8.615850e-47 |
| Msa1132950 | Msa1205680 | 0.811018 | 8.632868e-51 | -8.615850e-47 |
| Msa1132950 | Msa1208810 | 0.805707 | 1.171999e-49 | -8.615850e-47 |
| Msa1132950 | Msa1217810 | 0.848972 | 4.358541e-60 | -8.615850e-47 |
| Msa1132950 | Msa1230830 | 0.855887 | 4.666595e-62 | -8.615850e-47 |
| Msa1132950 | Msa1256710 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa1132950 | Msa1258380 | -0.802418 | 5.664506e-49 | -8.615850e-47 |
| Msa1132950 | Msa1279210 | 0.806715 | 7.190130e-50 | -8.615850e-47 |
| Msa1132950 | Msa1292730 | 0.825121 | 5.571963e-54 | -8.615850e-47 |
| Msa1132950 | Msa1296960 | -0.800297 | 1.539903e-48 | -8.615850e-47 |
| Msa1132950 | Msa1297750 | 0.811316 | 7.442242e-51 | -8.615850e-47 |
| Msa1132950 | Msa1306700 | 0.808128 | 3.606004e-50 | -8.615850e-47 |
| Msa1132950 | Msa1322190 | 0.808261 | 3.378537e-50 | -8.615850e-47 |
| Msa1132950 | Msa1370630 | 0.874773 | 5.194418e-68 | -8.615850e-47 |
| Msa1132950 | Msa1370650 | 0.806415 | 8.317518e-50 | -8.615850e-47 |
| Msa1132950 | Msa1370910 | -0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa1132950 | Msa1377070 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
| Msa1132950 | Msa1378230 | 0.859355 | 4.379835e-63 | -8.615850e-47 |
| Msa1132950 | Msa1382930 | 0.802187 | 6.317662e-49 | -8.615850e-47 |
| Msa1132950 | Msa1396090 | 0.833711 | 4.557450e-56 | -8.615850e-47 |
| Msa1132950 | Msa1412760 | -0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa1132950 | Msa1428560 | 0.808191 | 3.496329e-50 | -8.615850e-47 |
| Msa1132950 | Msa1432790 | 0.823717 | 1.191806e-53 | -8.615850e-47 |
| Msa1132950 | Msa1432800 | 0.812456 | 4.201261e-51 | -8.615850e-47 |
| Msa1132950 | Msa1437680 | 0.814248 | 1.697156e-51 | -8.615850e-47 |
| Msa1132950 | Msa1438910 | 0.802458 | 5.557149e-49 | -8.615850e-47 |
| Msa1132950 | Msa1449670 | -0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa1132950 | Msa1451620 | -0.810149 | 1.330273e-50 | -8.615850e-47 |
| Msa1132950 | Msa1457670 | -0.800285 | 1.548106e-48 | -8.615850e-47 |
| Msa0485500 | Msa1132950 | -0.805818 | 1.110829e-49 | -8.615850e-47 |
| Msa0496460 | Msa1132950 | 0.834988 | 2.178959e-56 | -8.615850e-47 |
| Msa0498230 | Msa1132950 | 0.807375 | 5.212834e-50 | -8.615850e-47 |
| Msa0502910 | Msa1132950 | 0.815715 | 8.019526e-52 | -8.615850e-47 |
| Msa0511720 | Msa1132950 | -0.839975 | 1.148840e-57 | -8.615850e-47 |
| Msa0514130 | Msa1132950 | -0.800664 | 1.295859e-48 | -8.615850e-47 |
| Msa0536220 | Msa1132950 | 0.804081 | 2.563858e-49 | -8.615850e-47 |
| Msa0543900 | Msa1132950 | 0.850193 | 1.989791e-60 | -8.615850e-47 |
| Msa0564510 | Msa1132950 | 0.831323 | 1.781219e-55 | -8.615850e-47 |
| Msa0578970 | Msa1132950 | 0.805523 | 1.280908e-49 | -8.615850e-47 |
| Msa0599770 | Msa1132950 | 0.836379 | 9.688958e-57 | -8.615850e-47 |
| Msa0599890 | Msa1132950 | 0.801332 | 9.465068e-49 | -8.615850e-47 |
| Msa0843280 | Msa1132950 | 0.832278 | 1.035645e-55 | -8.615850e-47 |
| Msa0846810 | Msa1132950 | 0.811695 | 6.157107e-51 | -8.615850e-47 |
| Msa0894500 | Msa1132950 | 0.857209 | 1.907163e-62 | -8.615850e-47 |
| Msa0900200 | Msa1132950 | 0.848571 | 5.630047e-60 | -8.615850e-47 |
| Msa0921080 | Msa1132950 | 0.807697 | 4.453470e-50 | -8.615850e-47 |
| Msa0951720 | Msa1132950 | 0.801471 | 8.862849e-49 | -8.615850e-47 |
| Msa0961420 | Msa1132950 | -0.811384 | 7.193503e-51 | -8.615850e-47 |
| Msa0965520 | Msa1132950 | 0.844939 | 5.539042e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132950 | MtrunA17_Chr5g0398211 | 98.099 | 263 | 5 | 0 | 1 | 263 | 1 | 263 | 0.0 | 540 |
| Msa1132950 | MtrunA17_Chr3g0125521 | 48.864 | 176 | 85 | 3 | 38 | 212 | 50 | 221 | 7.97e-53 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132950 | AT4G22920.2 | 67.704 | 257 | 69 | 4 | 11 | 260 | 9 | 258 | 2.06e-122 | 350 |
| Msa1132950 | AT4G22920.1 | 67.704 | 257 | 69 | 4 | 11 | 260 | 9 | 258 | 2.06e-122 | 350 |
| Msa1132950 | AT4G11910.1 | 63.889 | 252 | 86 | 4 | 11 | 257 | 9 | 260 | 1.50e-108 | 315 |
| Msa1132950 | AT4G11911.1 | 64.069 | 231 | 80 | 2 | 11 | 239 | 9 | 238 | 1.80e-102 | 299 |
| Msa1132950 | AT4G11911.2 | 69.849 | 199 | 59 | 1 | 41 | 239 | 1 | 198 | 2.08e-98 | 288 |
| Msa1132950 | AT1G44000.1 | 51.913 | 183 | 79 | 5 | 38 | 216 | 57 | 234 | 3.77e-57 | 184 |
Find 95 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATAACCGTCTTCTATT+TGG | 0.148851 | 7_3:+85835318 | None:intergenic |
| CATTCTACCTTCTTGAATTC+TGG | 0.156627 | 7_3:+85833391 | None:intergenic |
| GAACAGGTTGCTAGGTTATT+TGG | 0.187592 | 7_3:-85835173 | Msa1132950:intron |
| TAAGATTGAGCTAAGAAAAT+TGG | 0.198138 | 7_3:+85835623 | None:intergenic |
| CCAAAGGGACCACCAAAATT+TGG | 0.219438 | 7_3:-85833326 | Msa1132950:CDS |
| ATTTACATTGAAAAGGGTTT+TGG | 0.242894 | 7_3:+85833106 | None:intergenic |
| ACCAATGCTTCCTGTAATTC+AGG | 0.279537 | 7_3:+85833439 | None:intergenic |
| CTTCTCTATCATCATAATAA+TGG | 0.299208 | 7_3:+85835925 | None:intergenic |
| GCTGAGGTAGGGCCAAATTT+TGG | 0.301168 | 7_3:+85833314 | None:intergenic |
| TGTTGAGAAGAATCTTCTTT+AGG | 0.306442 | 7_3:+85835591 | None:intergenic |
| CTTTGTGAGTCCACAAAGAT+TGG | 0.315178 | 7_3:-85835443 | Msa1132950:five_prime_UTR |
| AAATACCTGAGAGTTATTAA+TGG | 0.325107 | 7_3:+85835010 | None:intergenic |
| CACCAACTATCCTGAATTAC+AGG | 0.327258 | 7_3:-85833449 | Msa1132950:CDS |
| TTATTGTTATGTATGACTTT+TGG | 0.331658 | 7_3:+85835691 | None:intergenic |
| TGAGTTTCAATTCCATCAAT+AGG | 0.352407 | 7_3:+85833202 | None:intergenic |
| TAAGTCCTTGGAAGATTTCC+TGG | 0.366121 | 7_3:+85835086 | None:intergenic |
| TTCTTATATTTACATTGAAA+AGG | 0.368902 | 7_3:+85833099 | None:intergenic |
| GGTTGGGAAGCCTCCTTTAG+TGG | 0.373904 | 7_3:+85833361 | None:intergenic |
| ATTCAAGAAGGTAGAATGTT+GGG | 0.383024 | 7_3:-85833386 | Msa1132950:CDS |
| AACTTACCACGTGGTCTTGT+TGG | 0.385436 | 7_3:+85835839 | None:intergenic |
| CACATACAGGAACAATTGAT+TGG | 0.393271 | 7_3:+85835289 | None:intergenic |
| TTCCAAATAGAAGACGGTTA+TGG | 0.397479 | 7_3:-85835320 | Msa1132950:CDS |
| GATACTTATGAACCTATTGA+TGG | 0.400985 | 7_3:-85833214 | Msa1132950:CDS |
| TTGGGTCCCACTAGTAGGTT+GGG | 0.401919 | 7_3:+85833345 | None:intergenic |
| CATGTTCATTGTCACATTAG+TGG | 0.407387 | 7_3:-85834741 | Msa1132950:CDS |
| TGATTTGGTTTAGGTATTGA+AGG | 0.414490 | 7_3:-85833500 | Msa1132950:intron |
| AATTACAGGAAGCATTGGTT+TGG | 0.424733 | 7_3:-85833435 | Msa1132950:CDS |
| ATTACAGGAAGCATTGGTTT+GGG | 0.429267 | 7_3:-85833434 | Msa1132950:CDS |
| ATTTGAAGCATCAAAATTGA+AGG | 0.430414 | 7_3:-85835141 | Msa1132950:CDS |
| TCCCTTTGGGTCCCACTAGT+AGG | 0.437715 | 7_3:+85833340 | None:intergenic |
| AGGTTTATGTTGAGGTGAAA+AGG | 0.439529 | 7_3:+85835347 | None:intergenic |
| ATAGTTAGATCCAATCTTTG+TGG | 0.443621 | 7_3:+85835433 | None:intergenic |
| ACCTCATTAGAGCACGGCAT+TGG | 0.445650 | 7_3:+85833244 | None:intergenic |
| TTCCTGTAATTCAGGATAGT+TGG | 0.452404 | 7_3:+85833447 | None:intergenic |
| CCTCATTAGAGCACGGCATT+GGG | 0.453522 | 7_3:+85833245 | None:intergenic |
| TCCTGAATTACAGGAAGCAT+TGG | 0.454594 | 7_3:-85833440 | Msa1132950:CDS |
| CAATGGTCTATTCAATTCCT+AGG | 0.455657 | 7_3:+85832969 | None:intergenic |
| TCTTATATTTACATTGAAAA+GGG | 0.457222 | 7_3:+85833100 | None:intergenic |
| TTTGGGTCCCACTAGTAGGT+TGG | 0.459521 | 7_3:+85833344 | None:intergenic |
| TTTGATGCTTCAAATATAGC+TGG | 0.465176 | 7_3:+85835149 | None:intergenic |
| TCAAACCATTAATAACTCTC+AGG | 0.470517 | 7_3:-85835015 | Msa1132950:intron |
| TTCAATTGCAGTTGCAGGGA+TGG | 0.488186 | 7_3:-85834830 | Msa1132950:intron |
| AACTTAGAAGTGAGCATAGG+AGG | 0.493060 | 7_3:+85835378 | None:intergenic |
| CAATGTAAATATAAGAAAAG+TGG | 0.494441 | 7_3:-85833093 | Msa1132950:three_prime_UTR |
| TTCTTGACATGGCTGAGGTA+GGG | 0.498887 | 7_3:+85833303 | None:intergenic |
| TTTGATGAGTATAAGAATGA+AGG | 0.500949 | 7_3:+85835516 | None:intergenic |
| AGAATGTTGGGGTCCACTAA+AGG | 0.517602 | 7_3:-85833374 | Msa1132950:CDS |
| GAATTGAATAGACCATTGTA+AGG | 0.518903 | 7_3:-85832964 | Msa1132950:three_prime_UTR |
| ATGGTATAATAGATTGCAAA+GGG | 0.522358 | 7_3:-85834811 | Msa1132950:CDS |
| CCCAATGCCGTGCTCTAATG+AGG | 0.522660 | 7_3:-85833245 | Msa1132950:CDS |
| ACCTACTAGTGGGACCCAAA+GGG | 0.523997 | 7_3:-85833341 | Msa1132950:CDS |
| TTTCTTGACATGGCTGAGGT+AGG | 0.526253 | 7_3:+85833302 | None:intergenic |
| ATTGATGAAGACAAACATCC+AGG | 0.527903 | 7_3:-85835104 | Msa1132950:CDS |
| TGTGTTAACGTATAAGTCCT+TGG | 0.528432 | 7_3:+85835074 | None:intergenic |
| TGTAACCTCAAAACTCACTT+TGG | 0.528670 | 7_3:-85835045 | Msa1132950:CDS |
| TTATGTTGAGGTGAAAAGGA+AGG | 0.536070 | 7_3:+85835351 | None:intergenic |
| GGCATTGGGCTCAACTTCAA+CGG | 0.552318 | 7_3:+85833259 | None:intergenic |
| CTCTATCATCATAATAATGG+AGG | 0.557142 | 7_3:+85835928 | None:intergenic |
| AACCTACTAGTGGGACCCAA+AGG | 0.558097 | 7_3:-85833342 | Msa1132950:CDS |
| GGAATTCAATTGCAGTTGCA+GGG | 0.565695 | 7_3:-85834834 | Msa1132950:intron |
| CACTAATGTGACAATGAACA+TGG | 0.571160 | 7_3:+85834742 | None:intergenic |
| AAAGATTCCAGAATTCAAGA+AGG | 0.574918 | 7_3:-85833398 | Msa1132950:CDS |
| AATTCAAGAAGGTAGAATGT+TGG | 0.577576 | 7_3:-85833387 | Msa1132950:CDS |
| TTGAACTTAGAAGTGAGCAT+AGG | 0.579985 | 7_3:+85835375 | None:intergenic |
| GAGCATAGGAGGAGGAGCAG+TGG | 0.585361 | 7_3:+85835389 | None:intergenic |
| TCTATACGTTGCTCATTGTG+AGG | 0.590137 | 7_3:-85833135 | Msa1132950:three_prime_UTR |
| TTTGGGTTTGTGATTGCTTG+CGG | 0.595033 | 7_3:+85835709 | None:intergenic |
| TTAGAAGTGAGCATAGGAGG+AGG | 0.595572 | 7_3:+85835381 | None:intergenic |
| AGTTGTGGCGCAGTGGAAGA+AGG | 0.597675 | 7_3:-85834784 | Msa1132950:CDS |
| CTAATTTGTCTCTAATCCAA+CGG | 0.599107 | 7_3:+85835863 | None:intergenic |
| ATTGCAAAGGGATGAAGTTG+TGG | 0.601150 | 7_3:-85834799 | Msa1132950:CDS |
| TAAGTAGTAGTCTTGTGCAA+TGG | 0.603108 | 7_3:+85835738 | None:intergenic |
| TTCAAGAAGGTAGAATGTTG+GGG | 0.609386 | 7_3:-85833385 | Msa1132950:CDS |
| AACATCCAGGAAATCTTCCA+AGG | 0.610037 | 7_3:-85835091 | Msa1132950:CDS |
| TTTGCTTGTAACAAGTGATG+TGG | 0.612852 | 7_3:+85835562 | None:intergenic |
| GACAAAGAATTAACGTTACG+TGG | 0.612859 | 7_3:+85835465 | None:intergenic |
| GATCTAACTATACAAGAACA+TGG | 0.615433 | 7_3:-85835421 | Msa1132950:exon |
| GTTCATTGTCACATTAGTGG+TGG | 0.617241 | 7_3:-85834738 | Msa1132950:CDS |
| GAGGCTTCCCAACCTACTAG+TGG | 0.619748 | 7_3:-85833352 | Msa1132950:CDS |
| TTGCTTGTAACAAGTGATGT+GGG | 0.620900 | 7_3:+85835563 | None:intergenic |
| GGCGCAGTGGAAGAAGGTGA+AGG | 0.625074 | 7_3:-85834778 | Msa1132950:CDS |
| TTGATGAGTATAAGAATGAA+GGG | 0.626743 | 7_3:+85835517 | None:intergenic |
| GCGCAGTGGAAGAAGGTGAA+GGG | 0.627737 | 7_3:-85834777 | Msa1132950:CDS |
| AAAAGAAACGTGTCTTAGAG+AGG | 0.630491 | 7_3:-85835811 | Msa1132950:five_prime_UTR |
| GGGATGAAGTTGTGGCGCAG+TGG | 0.632593 | 7_3:-85834791 | Msa1132950:CDS |
| GATGGTATAATAGATTGCAA+AGG | 0.636493 | 7_3:-85834812 | Msa1132950:CDS |
| ATTGGGCTCAACTTCAACGG+TGG | 0.639681 | 7_3:+85833262 | None:intergenic |
| AGGCTTCCCAACCTACTAGT+GGG | 0.640121 | 7_3:-85833351 | Msa1132950:CDS |
| ATGTTGGGGTCCACTAAAGG+AGG | 0.649589 | 7_3:-85833371 | Msa1132950:CDS |
| TTGTGAACCTCATTAGAGCA+CGG | 0.658169 | 7_3:+85833238 | None:intergenic |
| ATCTAACTATACAAGAACAT+GGG | 0.661857 | 7_3:-85835420 | Msa1132950:exon |
| TAAGAAATGAGACTTTCGTG+TGG | 0.719120 | 7_3:+85833159 | None:intergenic |
| ATTTGTCTCTAATCCAACGG+TGG | 0.720023 | 7_3:+85835866 | None:intergenic |
| CTTCTGCAAAGAGTTACCCG+TGG | 0.735433 | 7_3:-85834673 | Msa1132950:intron |
| ATTAGTCCAACAAGACCACG+TGG | 0.792998 | 7_3:-85835845 | Msa1132950:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATCAATATTGAATTTT+AGG | - | chr7_3:85833980-85833999 | Msa1132950:intron | 10.0% |
| !! | TTAAGTTTGATAAAATATAA+GGG | - | chr7_3:85835084-85835103 | Msa1132950:CDS | 10.0% |
| !! | AAAAATAATAAATATTGCAT+TGG | - | chr7_3:85835119-85835138 | Msa1132950:CDS | 10.0% |
| !!! | GATTTTAATTCATAAAAATT+AGG | - | chr7_3:85835833-85835852 | Msa1132950:five_prime_UTR | 10.0% |
| !! | AATTTAGAAAGATTAAAGAA+AGG | - | chr7_3:85833610-85833629 | Msa1132950:intron | 15.0% |
| !!! | AATAAAAAAGTATACAAACA+TGG | - | chr7_3:85834003-85834022 | Msa1132950:intron | 15.0% |
| !!! | ATAAAAAAGTATACAAACAT+GGG | - | chr7_3:85834004-85834023 | Msa1132950:intron | 15.0% |
| !! | CTAAATTTAAACTACATATA+TGG | - | chr7_3:85834550-85834569 | Msa1132950:intron | 15.0% |
| !! | CAATTCAAATGAAAAAAAAT+TGG | + | chr7_3:85834639-85834658 | None:intergenic | 15.0% |
| !! | GTTAAGTTTGATAAAATATA+AGG | - | chr7_3:85835083-85835102 | Msa1132950:CDS | 15.0% |
| !!! | AAAATATAAGGGTATAATAA+AGG | - | chr7_3:85835095-85835114 | Msa1132950:CDS | 15.0% |
| !!! | ATTTTGAGAAAATGAAAAAA+TGG | - | chr7_3:85835160-85835179 | Msa1132950:CDS | 15.0% |
| !! | TCTTATATTTACATTGAAAA+GGG | + | chr7_3:85835762-85835781 | None:intergenic | 15.0% |
| !! | TTCTTATATTTACATTGAAA+AGG | + | chr7_3:85835763-85835782 | None:intergenic | 15.0% |
| !!! | TATTGTTATGTATGACTTTT+GGG | + | chr7_3:85833170-85833189 | None:intergenic | 20.0% |
| !!! | TTATTGTTATGTATGACTTT+TGG | + | chr7_3:85833171-85833190 | None:intergenic | 20.0% |
| !! | TATTGAAAAAACTCACAAAT+TGG | + | chr7_3:85834740-85834759 | None:intergenic | 20.0% |
| !! | TTAAAATCCCCTATTAATTT+AGG | - | chr7_3:85834774-85834793 | Msa1132950:CDS | 20.0% |
| !! | TAAAATCCCCTATTAATTTA+GGG | - | chr7_3:85834775-85834794 | Msa1132950:CDS | 20.0% |
| !!! | TTTTCACCTTAATTAATAGT+GGG | - | chr7_3:85834829-85834848 | Msa1132950:intron | 20.0% |
| !! | TTAAAACCCACTATTAATTA+AGG | + | chr7_3:85834838-85834857 | None:intergenic | 20.0% |
| !! | AAACAACTATTATTTAGAGA+CGG | + | chr7_3:85834958-85834977 | None:intergenic | 20.0% |
| !!! | TACAATTAATAAGGGTATTT+TGG | + | chr7_3:85835051-85835070 | None:intergenic | 20.0% |
| !! | CAATTCAAATGATAAAAAGT+TGG | + | chr7_3:85835231-85835250 | None:intergenic | 20.0% |
| !! | GACATGAAAAATATATGATT+AGG | - | chr7_3:85835267-85835286 | Msa1132950:intron | 20.0% |
| !! | TTAACAATATGTGTTTGATT+TGG | - | chr7_3:85835344-85835363 | Msa1132950:CDS | 20.0% |
| !! | CAATGTAAATATAAGAAAAG+TGG | - | chr7_3:85835766-85835785 | Msa1132950:intron | 20.0% |
| ! | CTTCTCTATCATCATAATAA+TGG | + | chr7_3:85832937-85832956 | None:intergenic | 25.0% |
| !!! | TTTTTGGTATAGCAAACTTT+AGG | + | chr7_3:85832964-85832983 | None:intergenic | 25.0% |
| !!! | AGTTTGCTATACCAAAAAAT+TGG | - | chr7_3:85832966-85832985 | Msa1132950:three_prime_UTR | 25.0% |
| !!! | TGTCTTTTTTTCCATAGTTT+TGG | + | chr7_3:85833101-85833120 | None:intergenic | 25.0% |
| ! | TAAGATTGAGCTAAGAAAAT+TGG | + | chr7_3:85833239-85833258 | None:intergenic | 25.0% |
| ! | TTGATGAGTATAAGAATGAA+GGG | + | chr7_3:85833345-85833364 | None:intergenic | 25.0% |
| ! | TTTGATGAGTATAAGAATGA+AGG | + | chr7_3:85833346-85833365 | None:intergenic | 25.0% |
| ! | ATCTAACTATACAAGAACAT+GGG | - | chr7_3:85833439-85833458 | Msa1132950:CDS | 25.0% |
| !! | TTGATTTGACTTTCTATTTG+TGG | - | chr7_3:85833646-85833665 | Msa1132950:intron | 25.0% |
| !! | TGATTTGACTTTCTATTTGT+GGG | - | chr7_3:85833647-85833666 | Msa1132950:intron | 25.0% |
| !! | ATTTGAAGCATCAAAATTGA+AGG | - | chr7_3:85833718-85833737 | Msa1132950:intron | 25.0% |
| !!! | AAATTGAAGGTTTTGTTCTT+AGG | - | chr7_3:85833731-85833750 | Msa1132950:intron | 25.0% |
| ! | AAATACCTGAGAGTTATTAA+TGG | + | chr7_3:85833852-85833871 | None:intergenic | 25.0% |
| ! | TTACTTCCATCAAATGATTA+GGG | + | chr7_3:85833918-85833937 | None:intergenic | 25.0% |
| ! | ATGGTATAATAGATTGCAAA+GGG | - | chr7_3:85834048-85834067 | Msa1132950:intron | 25.0% |
| ! | CGAATATATCCAACAAAAAA+TGG | + | chr7_3:85834147-85834166 | None:intergenic | 25.0% |
| ! | TAAAAAAGGTAAAGTAAGTG+TGG | + | chr7_3:85834346-85834365 | None:intergenic | 25.0% |
| ! | TATTTCGGATCTTGTAAAAA+AGG | + | chr7_3:85834360-85834379 | None:intergenic | 25.0% |
| ! | TAAGGTGAAAATTCATATTG+AGG | + | chr7_3:85834492-85834511 | None:intergenic | 25.0% |
| ! | AACCTACTATCAATCAATTA+AGG | + | chr7_3:85834510-85834529 | None:intergenic | 25.0% |
| !!! | ATAATTTGTTGACCAAATTG+CGG | + | chr7_3:85834584-85834603 | None:intergenic | 25.0% |
| ! | ATTTGGTCAACAAATTATCA+AGG | - | chr7_3:85834586-85834605 | Msa1132950:intron | 25.0% |
| ! | TTTGGTCAACAAATTATCAA+GGG | - | chr7_3:85834587-85834606 | Msa1132950:intron | 25.0% |
| ! | GAGACATGACTAATATAATT+AGG | - | chr7_3:85834673-85834692 | Msa1132950:intron | 25.0% |
| !!! | AGTTTTTTCAATACGTACAA+AGG | - | chr7_3:85834747-85834766 | Msa1132950:CDS | 25.0% |
| ! | AAAATCCCCTATTAATTTAG+GGG | - | chr7_3:85834776-85834795 | Msa1132950:CDS | 25.0% |
| ! | TAAAACCCCTAAATTAATAG+GGG | + | chr7_3:85834784-85834803 | None:intergenic | 25.0% |
| ! | CTAAAACCCCTAAATTAATA+GGG | + | chr7_3:85834785-85834804 | None:intergenic | 25.0% |
| !! | TCTAAAACCCCTAAATTAAT+AGG | + | chr7_3:85834786-85834805 | None:intergenic | 25.0% |
| !! | GTTTTCACCTTAATTAATAG+TGG | - | chr7_3:85834828-85834847 | Msa1132950:intron | 25.0% |
| ! | TATGACAATACTTAGCAATT+TGG | - | chr7_3:85834892-85834911 | Msa1132950:intron | 25.0% |
| ! | ATTTGGTCAACAAATTATCA+AGG | - | chr7_3:85834586-85834605 | Msa1132950:intron | 25.0% |
| ! | TTTGGTCAACAAATTATCAA+GGG | - | chr7_3:85834587-85834606 | Msa1132950:intron | 25.0% |
| ! | AAGTTTGTGCATGATTATTA+AGG | - | chr7_3:85834979-85834998 | Msa1132950:intron | 25.0% |
| !!! | ATTAATCGTGTTGATTTTGA+TGG | - | chr7_3:85835007-85835026 | Msa1132950:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr7_3:85835059-85835078 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr7_3:85835060-85835079 | None:intergenic | 25.0% |
| !!! | ATATGTGTTTGATTTGGTTT+AGG | - | chr7_3:85835350-85835369 | Msa1132950:CDS | 25.0% |
| !! | ATTTACATTGAAAAGGGTTT+TGG | + | chr7_3:85835756-85835775 | None:intergenic | 25.0% |
| !!! | GTAAACAAGTATTTTTACCT+AGG | - | chr7_3:85835873-85835892 | Msa1132950:five_prime_UTR | 25.0% |
| CTCTATCATCATAATAATGG+AGG | + | chr7_3:85832934-85832953 | None:intergenic | 30.0% | |
| ! | CTAATTTGTCTCTAATCCAA+CGG | + | chr7_3:85832999-85833018 | None:intergenic | 30.0% |
| !!! | TCCATAGTTTTGGCTATTTT+CGG | + | chr7_3:85833091-85833110 | None:intergenic | 30.0% |
| TGTTGAGAAGAATCTTCTTT+AGG | + | chr7_3:85833271-85833290 | None:intergenic | 30.0% | |
| ATAGTTAGATCCAATCTTTG+TGG | + | chr7_3:85833429-85833448 | None:intergenic | 30.0% | |
| GATCTAACTATACAAGAACA+TGG | - | chr7_3:85833438-85833457 | Msa1132950:CDS | 30.0% | |
| ! | CTCTTTTTCCAAATAGAAGA+CGG | - | chr7_3:85833533-85833552 | Msa1132950:intron | 30.0% |
| AAAGAGAAAGAAACACATAC+AGG | + | chr7_3:85833586-85833605 | None:intergenic | 30.0% | |
| TTTGATGCTTCAAATATAGC+TGG | + | chr7_3:85833713-85833732 | None:intergenic | 30.0% | |
| TCAAACCATTAATAACTCTC+AGG | - | chr7_3:85833844-85833863 | Msa1132950:intron | 30.0% | |
| GTTACTTCCATCAAATGATT+AGG | + | chr7_3:85833919-85833938 | None:intergenic | 30.0% | |
| GATGGTATAATAGATTGCAA+AGG | - | chr7_3:85834047-85834066 | Msa1132950:intron | 30.0% | |
| AAAAAAAGACATGCTTACCA+CGG | + | chr7_3:85834206-85834225 | None:intergenic | 30.0% | |
| TGAGTTTGAAAGGGTAAATA+TGG | - | chr7_3:85834285-85834304 | Msa1132950:intron | 30.0% | |
| GAGTTTGAAAGGGTAAATAT+GGG | - | chr7_3:85834286-85834305 | Msa1132950:intron | 30.0% | |
| AGTTTGAAAGGGTAAATATG+GGG | - | chr7_3:85834287-85834306 | Msa1132950:intron | 30.0% | |
| ACAAGAAAAAACTCGCAAAT+TGG | + | chr7_3:85834398-85834417 | None:intergenic | 30.0% | |
| !!! | GAGTTTTTTCTTGTACCTTA+AGG | - | chr7_3:85834404-85834423 | Msa1132950:intron | 30.0% |
| ATCTTTGTACATGTTCCTTA+AGG | + | chr7_3:85834422-85834441 | None:intergenic | 30.0% | |
| TTAAAACCCCCTATTAATTG+AGG | - | chr7_3:85834444-85834463 | Msa1132950:intron | 30.0% | |
| TAAAACCCCCTATTAATTGA+GGG | - | chr7_3:85834445-85834464 | Msa1132950:intron | 30.0% | |
| TAAAACCCCTCAATTAATAG+GGG | + | chr7_3:85834454-85834473 | None:intergenic | 30.0% | |
| CTAAAACCCCTCAATTAATA+GGG | + | chr7_3:85834455-85834474 | None:intergenic | 30.0% | |
| ! | TCTAAAACCCCTCAATTAAT+AGG | + | chr7_3:85834456-85834475 | None:intergenic | 30.0% |
| GTGAAAATTCATATTGAGGT+GGG | + | chr7_3:85834488-85834507 | None:intergenic | 30.0% | |
| ! | CACCTTAATTGATTGATAGT+AGG | - | chr7_3:85834505-85834524 | Msa1132950:intron | 30.0% |
| TTGGTCAACAAATTATCAAG+GGG | - | chr7_3:85834588-85834607 | Msa1132950:intron | 30.0% | |
| TTCATTTGAATTGTACCTAC+CGG | - | chr7_3:85834646-85834665 | Msa1132950:intron | 30.0% | |
| !! | AAACTCACAAATTGGTCTTT+AGG | + | chr7_3:85834732-85834751 | None:intergenic | 30.0% |
| AACTATTATTTAGAGACGGA+GGG | + | chr7_3:85834954-85834973 | None:intergenic | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr7_3:85835056-85835075 | Msa1132950:CDS | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr7_3:85835185-85835204 | Msa1132950:intron | 30.0% | |
| TTATCATTTGAATTGCACCT+AGG | - | chr7_3:85835236-85835255 | Msa1132950:intron | 30.0% | |
| !! | TGATTTGGTTTAGGTATTGA+AGG | - | chr7_3:85835359-85835378 | Msa1132950:CDS | 30.0% |
| AAAGATTCCAGAATTCAAGA+AGG | - | chr7_3:85835461-85835480 | Msa1132950:five_prime_UTR | 30.0% | |
| AATTCAAGAAGGTAGAATGT+TGG | - | chr7_3:85835472-85835491 | Msa1132950:five_prime_UTR | 30.0% | |
| ATTCAAGAAGGTAGAATGTT+GGG | - | chr7_3:85835473-85835492 | Msa1132950:five_prime_UTR | 30.0% | |
| GATACTTATGAACCTATTGA+TGG | - | chr7_3:85835645-85835664 | Msa1132950:five_prime_UTR | 30.0% | |
| TGAGTTTCAATTCCATCAAT+AGG | + | chr7_3:85835660-85835679 | None:intergenic | 30.0% | |
| GAATTGAATAGACCATTGTA+AGG | - | chr7_3:85835895-85835914 | Msa1132950:five_prime_UTR | 30.0% | |
| ! | TGCAATTTTGAACCTTACAA+TGG | + | chr7_3:85835910-85835929 | None:intergenic | 30.0% |
| ! | TTTTGTGTTAACTTACCACG+TGG | + | chr7_3:85833032-85833051 | None:intergenic | 35.0% |
| AAAAGAAACGTGTCTTAGAG+AGG | - | chr7_3:85833048-85833067 | Msa1132950:three_prime_UTR | 35.0% | |
| ACCGAAAATAGCCAAAACTA+TGG | - | chr7_3:85833087-85833106 | Msa1132950:three_prime_UTR | 35.0% | |
| !! | TAAGTAGTAGTCTTGTGCAA+TGG | + | chr7_3:85833124-85833143 | None:intergenic | 35.0% |
| TTGCTTGTAACAAGTGATGT+GGG | + | chr7_3:85833299-85833318 | None:intergenic | 35.0% | |
| TTTGCTTGTAACAAGTGATG+TGG | + | chr7_3:85833300-85833319 | None:intergenic | 35.0% | |
| GACAAAGAATTAACGTTACG+TGG | + | chr7_3:85833397-85833416 | None:intergenic | 35.0% | |
| TTGAACTTAGAAGTGAGCAT+AGG | + | chr7_3:85833487-85833506 | None:intergenic | 35.0% | |
| TTATGTTGAGGTGAAAAGGA+AGG | + | chr7_3:85833511-85833530 | None:intergenic | 35.0% | |
| AGGTTTATGTTGAGGTGAAA+AGG | + | chr7_3:85833515-85833534 | None:intergenic | 35.0% | |
| GGAAAAAGAGGTTTATGTTG+AGG | + | chr7_3:85833523-85833542 | None:intergenic | 35.0% | |
| CGTCTTCTATTTGGAAAAAG+AGG | + | chr7_3:85833535-85833554 | None:intergenic | 35.0% | |
| TTCCAAATAGAAGACGGTTA+TGG | - | chr7_3:85833539-85833558 | Msa1132950:intron | 35.0% | |
| TTCCATAACCGTCTTCTATT+TGG | + | chr7_3:85833544-85833563 | None:intergenic | 35.0% | |
| CACATACAGGAACAATTGAT+TGG | + | chr7_3:85833573-85833592 | None:intergenic | 35.0% | |
| TGACTTTCTATTTGTGGGTT+TGG | - | chr7_3:85833652-85833671 | Msa1132950:intron | 35.0% | |
| ! | TTCTATTTGTGGGTTTGGTT+TGG | - | chr7_3:85833657-85833676 | Msa1132950:intron | 35.0% |
| !!! | TTTGGTTTGGATTTTGGAAC+AGG | - | chr7_3:85833670-85833689 | Msa1132950:intron | 35.0% |
| ATTGATGAAGACAAACATCC+AGG | - | chr7_3:85833755-85833774 | Msa1132950:intron | 35.0% | |
| TGTGTTAACGTATAAGTCCT+TGG | + | chr7_3:85833788-85833807 | None:intergenic | 35.0% | |
| TGTAACCTCAAAACTCACTT+TGG | - | chr7_3:85833814-85833833 | Msa1132950:intron | 35.0% | |
| ! | AATTGCCAAAGTGAGTTTTG+AGG | + | chr7_3:85833822-85833841 | None:intergenic | 35.0% |
| TGTCTTCCCTAATCATTTGA+TGG | - | chr7_3:85833909-85833928 | Msa1132950:intron | 35.0% | |
| GTAACAAAACAGAGTTGAAG+AGG | - | chr7_3:85833934-85833953 | Msa1132950:intron | 35.0% | |
| CACTAATGTGACAATGAACA+TGG | + | chr7_3:85834120-85834139 | None:intergenic | 35.0% | |
| CATGTTCATTGTCACATTAG+TGG | - | chr7_3:85834118-85834137 | Msa1132950:intron | 35.0% | |
| AAAAAAGACATGCTTACCAC+GGG | + | chr7_3:85834205-85834224 | None:intergenic | 35.0% | |
| ACACACTTGATGCATGTAAT+AGG | - | chr7_3:85834255-85834274 | Msa1132950:intron | 35.0% | |
| CACACTTGATGCATGTAATA+GGG | - | chr7_3:85834256-85834275 | Msa1132950:intron | 35.0% | |
| ACACTTGATGCATGTAATAG+GGG | - | chr7_3:85834257-85834276 | Msa1132950:intron | 35.0% | |
| !! | AGGGGTATTATGAGTTTGAA+AGG | - | chr7_3:85834275-85834294 | Msa1132950:intron | 35.0% |
| ! | GGGGTATTATGAGTTTGAAA+GGG | - | chr7_3:85834276-85834295 | Msa1132950:intron | 35.0% |
| AAAACCCCCTATTAATTGAG+GGG | - | chr7_3:85834446-85834465 | Msa1132950:intron | 35.0% | |
| AAAACCCCTCAATTAATAGG+GGG | + | chr7_3:85834453-85834472 | None:intergenic | 35.0% | |
| GGTGAAAATTCATATTGAGG+TGG | + | chr7_3:85834489-85834508 | None:intergenic | 35.0% | |
| TATTAGTCATGTCTCATGTC+CGG | + | chr7_3:85834668-85834687 | None:intergenic | 35.0% | |
| CAACTATTATTTAGAGACGG+AGG | + | chr7_3:85834955-85834974 | None:intergenic | 35.0% | |
| ! | GTATTGAAGGCTTTTGTACA+CGG | - | chr7_3:85835372-85835391 | Msa1132950:CDS | 35.0% |
| TTCCTGTAATTCAGGATAGT+TGG | + | chr7_3:85835415-85835434 | None:intergenic | 35.0% | |
| !! | AATTACAGGAAGCATTGGTT+TGG | - | chr7_3:85835424-85835443 | Msa1132950:exon | 35.0% |
| !! | ATTACAGGAAGCATTGGTTT+GGG | - | chr7_3:85835425-85835444 | Msa1132950:five_prime_UTR | 35.0% |
| CATTCTACCTTCTTGAATTC+TGG | + | chr7_3:85835471-85835490 | None:intergenic | 35.0% | |
| TTCAAGAAGGTAGAATGTTG+GGG | - | chr7_3:85835474-85835493 | Msa1132950:five_prime_UTR | 35.0% | |
| TAAGAAATGAGACTTTCGTG+TGG | + | chr7_3:85835703-85835722 | None:intergenic | 35.0% | |
| CAATGGTCTATTCAATTCCT+AGG | + | chr7_3:85835893-85835912 | None:intergenic | 35.0% | |
| !!! | ACGGTGGTAGACCAATTTTT+TGG | + | chr7_3:85832980-85832999 | None:intergenic | 40.0% |
| ! | AAAAATTGGTCTACCACCGT+TGG | - | chr7_3:85832980-85832999 | Msa1132950:three_prime_UTR | 40.0% |
| ATTTGTCTCTAATCCAACGG+TGG | + | chr7_3:85832996-85833015 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTGTGATTGCTTG+CGG | + | chr7_3:85833153-85833172 | None:intergenic | 40.0% |
| CTTTGTGAGTCCACAAAGAT+TGG | - | chr7_3:85833416-85833435 | Msa1132950:CDS | 40.0% | |
| AACTTAGAAGTGAGCATAGG+AGG | + | chr7_3:85833484-85833503 | None:intergenic | 40.0% | |
| !!! | TGTGGGTTTGGTTTGGATTT+TGG | - | chr7_3:85833664-85833683 | Msa1132950:intron | 40.0% |
| GAACAGGTTGCTAGGTTATT+TGG | - | chr7_3:85833686-85833705 | Msa1132950:intron | 40.0% | |
| AACATCCAGGAAATCTTCCA+AGG | - | chr7_3:85833768-85833787 | Msa1132950:intron | 40.0% | |
| TAAGTCCTTGGAAGATTTCC+TGG | + | chr7_3:85833776-85833795 | None:intergenic | 40.0% | |
| GGAATTCAATTGCAGTTGCA+GGG | - | chr7_3:85834025-85834044 | Msa1132950:intron | 40.0% | |
| ATTGCAAAGGGATGAAGTTG+TGG | - | chr7_3:85834060-85834079 | Msa1132950:intron | 40.0% | |
| GTTCATTGTCACATTAGTGG+TGG | - | chr7_3:85834121-85834140 | Msa1132950:intron | 40.0% | |
| !!! | TAGTGGTGGCCATTTTTTGT+TGG | - | chr7_3:85834135-85834154 | Msa1132950:intron | 40.0% |
| TCGCTAGGACAACGATATTT+CGG | + | chr7_3:85834375-85834394 | None:intergenic | 40.0% | |
| ATGGCAATAACTCCGCAATT+TGG | - | chr7_3:85834569-85834588 | Msa1132950:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+TGG | - | chr7_3:85835189-85835208 | Msa1132950:intron | 40.0% | |
| TGAATTGCACCTAGGAGATA+TGG | - | chr7_3:85835244-85835263 | Msa1132950:intron | 40.0% | |
| GAATTGCACCTAGGAGATAT+GGG | - | chr7_3:85835245-85835264 | Msa1132950:intron | 40.0% | |
| TTTCATGTCCCATATCTCCT+AGG | + | chr7_3:85835256-85835275 | None:intergenic | 40.0% | |
| CACCAACTATCCTGAATTAC+AGG | - | chr7_3:85835410-85835429 | Msa1132950:exon | 40.0% | |
| ! | TCCTGAATTACAGGAAGCAT+TGG | - | chr7_3:85835419-85835438 | Msa1132950:exon | 40.0% |
| ACCAATGCTTCCTGTAATTC+AGG | + | chr7_3:85835423-85835442 | None:intergenic | 40.0% | |
| !! | CAAATTTTGGTGGTCCCTTT+GGG | + | chr7_3:85835535-85835554 | None:intergenic | 40.0% |
| ! | CAATTTTCTTGACATGGCTG+AGG | + | chr7_3:85835564-85835583 | None:intergenic | 40.0% |
| ! | CACTCGCAATTTTCTTGACA+TGG | + | chr7_3:85835570-85835589 | None:intergenic | 40.0% |
| TTGTGAACCTCATTAGAGCA+CGG | + | chr7_3:85835624-85835643 | None:intergenic | 40.0% | |
| TCTATACGTTGCTCATTGTG+AGG | - | chr7_3:85835724-85835743 | Msa1132950:five_prime_UTR | 40.0% | |
| ATTAGTCCAACAAGACCACG+TGG | - | chr7_3:85833014-85833033 | Msa1132950:three_prime_UTR | 45.0% | |
| !! | AACTTACCACGTGGTCTTGT+TGG | + | chr7_3:85833023-85833042 | None:intergenic | 45.0% |
| TTAGAAGTGAGCATAGGAGG+AGG | + | chr7_3:85833481-85833500 | None:intergenic | 45.0% | |
| !!! | GGATTTTGGAACAGGTTGCT+AGG | - | chr7_3:85833678-85833697 | Msa1132950:intron | 45.0% |
| GGGAATTCAATTGCAGTTGC+AGG | - | chr7_3:85834024-85834043 | Msa1132950:intron | 45.0% | |
| TTCAATTGCAGTTGCAGGGA+TGG | - | chr7_3:85834029-85834048 | Msa1132950:intron | 45.0% | |
| AAACTCGCAAATTGGTCGCT+AGG | + | chr7_3:85834390-85834409 | None:intergenic | 45.0% | |
| ! | AAGGCTTTTGTACACGGTGA+CGG | - | chr7_3:85835378-85835397 | Msa1132950:CDS | 45.0% |
| AGAATGTTGGGGTCCACTAA+AGG | - | chr7_3:85835485-85835504 | Msa1132950:five_prime_UTR | 45.0% | |
| !! | CCAAATTTTGGTGGTCCCTT+TGG | + | chr7_3:85835536-85835555 | None:intergenic | 45.0% |
| CCAAAGGGACCACCAAAATT+TGG | - | chr7_3:85835533-85835552 | Msa1132950:five_prime_UTR | 45.0% | |
| TTCTTGACATGGCTGAGGTA+GGG | + | chr7_3:85835559-85835578 | None:intergenic | 45.0% | |
| TTTCTTGACATGGCTGAGGT+AGG | + | chr7_3:85835560-85835579 | None:intergenic | 45.0% | |
| !!! | TTATTTTACTTTTTTTTTTT+TGG | - | chr7_3:85835805-85835824 | Msa1132950:five_prime_UTR | 5.0% |
| CTTCTGCAAAGAGTTACCCG+TGG | - | chr7_3:85834186-85834205 | Msa1132950:intron | 50.0% | |
| AGTCATGTCTCATGTCCGGT+AGG | + | chr7_3:85834664-85834683 | None:intergenic | 50.0% | |
| ATGTTGGGGTCCACTAAAGG+AGG | - | chr7_3:85835488-85835507 | Msa1132950:five_prime_UTR | 50.0% | |
| AGGCTTCCCAACCTACTAGT+GGG | - | chr7_3:85835508-85835527 | Msa1132950:five_prime_UTR | 50.0% | |
| TTGGGTCCCACTAGTAGGTT+GGG | + | chr7_3:85835517-85835536 | None:intergenic | 50.0% | |
| TTTGGGTCCCACTAGTAGGT+TGG | + | chr7_3:85835518-85835537 | None:intergenic | 50.0% | |
| AACCTACTAGTGGGACCCAA+AGG | - | chr7_3:85835517-85835536 | Msa1132950:five_prime_UTR | 50.0% | |
| ACCTACTAGTGGGACCCAAA+GGG | - | chr7_3:85835518-85835537 | Msa1132950:five_prime_UTR | 50.0% | |
| ! | GAGGTAGGGCCAAATTTTGG+TGG | + | chr7_3:85835545-85835564 | None:intergenic | 50.0% |
| ! | GCTGAGGTAGGGCCAAATTT+TGG | + | chr7_3:85835548-85835567 | None:intergenic | 50.0% |
| ATTGGGCTCAACTTCAACGG+TGG | + | chr7_3:85835600-85835619 | None:intergenic | 50.0% | |
| ! | GGCATTGGGCTCAACTTCAA+CGG | + | chr7_3:85835603-85835622 | None:intergenic | 50.0% |
| CCTCATTAGAGCACGGCATT+GGG | + | chr7_3:85835617-85835636 | None:intergenic | 50.0% | |
| ACCTCATTAGAGCACGGCAT+TGG | + | chr7_3:85835618-85835637 | None:intergenic | 50.0% | |
| AGTTGTGGCGCAGTGGAAGA+AGG | - | chr7_3:85834075-85834094 | Msa1132950:intron | 55.0% | |
| GCGCAGTGGAAGAAGGTGAA+GGG | - | chr7_3:85834082-85834101 | Msa1132950:intron | 55.0% | |
| GGTTGGGAAGCCTCCTTTAG+TGG | + | chr7_3:85835501-85835520 | None:intergenic | 55.0% | |
| GAGGCTTCCCAACCTACTAG+TGG | - | chr7_3:85835507-85835526 | Msa1132950:five_prime_UTR | 55.0% | |
| TCCCTTTGGGTCCCACTAGT+AGG | + | chr7_3:85835522-85835541 | None:intergenic | 55.0% | |
| CCCAATGCCGTGCTCTAATG+AGG | - | chr7_3:85835614-85835633 | Msa1132950:five_prime_UTR | 55.0% | |
| GAGCATAGGAGGAGGAGCAG+TGG | + | chr7_3:85833473-85833492 | None:intergenic | 60.0% | |
| GGGATGAAGTTGTGGCGCAG+TGG | - | chr7_3:85834068-85834087 | Msa1132950:intron | 60.0% | |
| GGCGCAGTGGAAGAAGGTGA+AGG | - | chr7_3:85834081-85834100 | Msa1132950:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 85832905 | 85835976 | 85832905 | ID=Msa1132950;Name=Msa1132950 |
| chr7_3 | mRNA | 85832905 | 85835976 | 85832905 | ID=Msa1132950-mRNA-1;Parent=Msa1132950;Name=Msa1132950-mRNA-1;_AED=0.19;_eAED=0.19;_QI=532|1|1|1|0.75|0.6|5|284|263 |
| chr7_3 | exon | 85832905 | 85833509 | 85832905 | ID=Msa1132950-mRNA-1:exon:25802;Parent=Msa1132950-mRNA-1 |
| chr7_3 | exon | 85834674 | 85834841 | 85834674 | ID=Msa1132950-mRNA-1:exon:25801;Parent=Msa1132950-mRNA-1 |
| chr7_3 | exon | 85835016 | 85835189 | 85835016 | ID=Msa1132950-mRNA-1:exon:25800;Parent=Msa1132950-mRNA-1 |
| chr7_3 | exon | 85835296 | 85835763 | 85835296 | ID=Msa1132950-mRNA-1:exon:25799;Parent=Msa1132950-mRNA-1 |
| chr7_3 | exon | 85835784 | 85835976 | 85835784 | ID=Msa1132950-mRNA-1:exon:25798;Parent=Msa1132950-mRNA-1 |
| chr7_3 | five_prime_UTR | 85835784 | 85835976 | 85835784 | ID=Msa1132950-mRNA-1:five_prime_utr;Parent=Msa1132950-mRNA-1 |
| chr7_3 | five_prime_UTR | 85835425 | 85835763 | 85835425 | ID=Msa1132950-mRNA-1:five_prime_utr;Parent=Msa1132950-mRNA-1 |
| chr7_3 | CDS | 85835296 | 85835424 | 85835296 | ID=Msa1132950-mRNA-1:cds;Parent=Msa1132950-mRNA-1 |
| chr7_3 | CDS | 85835016 | 85835189 | 85835016 | ID=Msa1132950-mRNA-1:cds;Parent=Msa1132950-mRNA-1 |
| chr7_3 | CDS | 85834674 | 85834841 | 85834674 | ID=Msa1132950-mRNA-1:cds;Parent=Msa1132950-mRNA-1 |
| chr7_3 | CDS | 85833189 | 85833509 | 85833189 | ID=Msa1132950-mRNA-1:cds;Parent=Msa1132950-mRNA-1 |
| chr7_3 | three_prime_UTR | 85832905 | 85833188 | 85832905 | ID=Msa1132950-mRNA-1:three_prime_utr;Parent=Msa1132950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
