Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089120 | sp|O23247|SYRM_ARATH | 70.741 | 540 | 155 | 3 | 1 | 540 | 106 | 642 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089120 | A0A072VRF3 | 99.074 | 540 | 5 | 0 | 1 | 540 | 57 | 596 | 0.0 | 1113 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089120 | Msa0604960 | 0.818767 | 1.650950e-52 | -8.615850e-47 |
| Msa0089120 | Msa0822580 | 0.824779 | 6.707639e-54 | -8.615850e-47 |
| Msa0089120 | Msa1082170 | 0.815010 | 1.150934e-51 | -8.615850e-47 |
| Msa0089120 | Msa1115590 | 0.803444 | 3.475410e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089120 | MtrunA17_Chr1g0206941 | 99.074 | 540 | 5 | 0 | 1 | 540 | 57 | 596 | 0.0 | 1113 |
| Msa0089120 | MtrunA17_Chr3g0140571 | 94.630 | 540 | 28 | 1 | 1 | 540 | 58 | 596 | 0.0 | 1067 |
| Msa0089120 | MtrunA17_Chr6g0487211 | 78.148 | 540 | 117 | 1 | 1 | 540 | 121 | 659 | 0.0 | 910 |
| Msa0089120 | MtrunA17_Chr4g0056881 | 72.770 | 426 | 56 | 3 | 1 | 394 | 58 | 455 | 0.0 | 627 |
| Msa0089120 | MtrunA17_Chr4g0056871 | 88.356 | 146 | 17 | 0 | 395 | 540 | 11 | 156 | 8.71e-88 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089120 | AT4G26300.1 | 70.741 | 540 | 155 | 3 | 1 | 540 | 106 | 642 | 0.0 | 807 |
| Msa0089120 | AT4G26300.2 | 70.741 | 540 | 155 | 3 | 1 | 540 | 80 | 616 | 0.0 | 807 |
| Msa0089120 | AT4G26300.5 | 70.741 | 540 | 155 | 3 | 1 | 540 | 117 | 653 | 0.0 | 806 |
| Msa0089120 | AT4G26300.3 | 70.741 | 540 | 155 | 3 | 1 | 540 | 93 | 629 | 0.0 | 805 |
| Msa0089120 | AT4G26300.4 | 70.741 | 540 | 155 | 3 | 1 | 540 | 54 | 590 | 0.0 | 805 |
| Msa0089120 | AT1G66530.1 | 69.259 | 540 | 163 | 3 | 1 | 540 | 54 | 590 | 0.0 | 787 |
Find 162 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTTAAATATTGTATTTC+TGG | 0.104256 | 1_2:-70538202 | None:intergenic |
| TCAGATTCCTTAACATCTTC+TGG | 0.172381 | 1_2:+70536273 | None:intergenic |
| TTGGAGAAACTGGAGAAATT+AGG | 0.196989 | 1_2:-70534841 | Msa0089120:CDS |
| TCCAAAGTTGGAGGGATTAA+TGG | 0.219730 | 1_2:+70534859 | None:intergenic |
| CTTCATTAAACACTTCATTA+AGG | 0.220024 | 1_2:+70531144 | None:intergenic |
| TGGAACACAAGCATCAATTA+AGG | 0.234845 | 1_2:+70538016 | None:intergenic |
| TTTACCAGATTTCCTGATAA+TGG | 0.236837 | 1_2:+70532413 | None:intergenic |
| ACATCAGAGGCAATTGGATA+TGG | 0.260123 | 1_2:-70533679 | Msa0089120:CDS |
| TTTCCATGCCGTGCGATACT+TGG | 0.265683 | 1_2:+70535430 | None:intergenic |
| CCCTCCAACTTTGGAGAAAC+TGG | 0.266401 | 1_2:-70534851 | Msa0089120:CDS |
| GCAATTGGCCACGTTGTTTC+GGG | 0.279977 | 1_2:-70538081 | Msa0089120:five_prime_UTR |
| TGCATTTCTTTGGCTATATT+CGG | 0.289640 | 1_2:+70536971 | None:intergenic |
| TGATCCTGATTTCAAGAAAA+AGG | 0.294382 | 1_2:-70535609 | Msa0089120:CDS |
| ATATGCACTCATATAGGTTT+TGG | 0.295018 | 1_2:-70534001 | Msa0089120:CDS |
| GGATATTCATTTGGATCCTT+TGG | 0.298860 | 1_2:+70534025 | None:intergenic |
| AGCAATTGGCCACGTTGTTT+CGG | 0.298871 | 1_2:-70538082 | Msa0089120:five_prime_UTR |
| TCGTGCTCGGTTGCGGGTCC+TGG | 0.308730 | 1_2:-70537238 | Msa0089120:CDS |
| CTAGGATCTGTTCCATTATC+AGG | 0.309543 | 1_2:-70532425 | Msa0089120:CDS |
| TCCATTAATCCCTCCAACTT+TGG | 0.322437 | 1_2:-70534860 | Msa0089120:CDS |
| GTGACCAACATGCATTTCTT+TGG | 0.327900 | 1_2:+70536961 | None:intergenic |
| TTCATTAAACACTTCATTAA+GGG | 0.330358 | 1_2:+70531145 | None:intergenic |
| GTAGAGTCGTGCTCGGTTGC+GGG | 0.333811 | 1_2:-70537244 | Msa0089120:CDS |
| TCCTTAACATCTTCTGGGTT+CGG | 0.355360 | 1_2:+70536279 | None:intergenic |
| CTTGTGACAGACTGGGAATT+TGG | 0.363232 | 1_2:-70532138 | Msa0089120:intron |
| ATTTACTTGATGAAGCTAAA+AGG | 0.368508 | 1_2:-70533913 | Msa0089120:CDS |
| TGGAGAAACTGGAGAAATTA+GGG | 0.368736 | 1_2:-70534840 | Msa0089120:CDS |
| GAACGAGGATTATTGAATTC+CGG | 0.368759 | 1_2:+70537405 | None:intergenic |
| AGTTTAAATATTGTATTTCT+GGG | 0.370612 | 1_2:-70538201 | None:intergenic |
| GTGCATATTGGATATTCATT+TGG | 0.374710 | 1_2:+70534016 | None:intergenic |
| AATATATATGTTACAGATGT+TGG | 0.383174 | 1_2:-70534191 | Msa0089120:CDS |
| GCGGATCATAACTTGTAAAC+TGG | 0.386985 | 1_2:+70531499 | None:intergenic |
| TTCTCCAGTTTCTCCAAAGT+TGG | 0.388161 | 1_2:+70534847 | None:intergenic |
| TGGAATCCGTTTGGAGGAAA+TGG | 0.396505 | 1_2:-70535357 | Msa0089120:intron |
| CAGATTCCTTAACATCTTCT+GGG | 0.400048 | 1_2:+70536274 | None:intergenic |
| GGAACACAAGCATCAATTAA+GGG | 0.401497 | 1_2:+70538017 | None:intergenic |
| ACTTCCAATCAAGAGGGTTA+TGG | 0.403068 | 1_2:-70537008 | Msa0089120:CDS |
| AAACCTATATGAGTGCATAT+TGG | 0.403279 | 1_2:+70534004 | None:intergenic |
| TGTTCCATTATCAGGAAATC+TGG | 0.404568 | 1_2:-70532417 | Msa0089120:CDS |
| CCCAGTCACCGATATGATTT+CGG | 0.405102 | 1_2:+70536867 | None:intergenic |
| GGTAGAGTCGTGCTCGGTTG+CGG | 0.406750 | 1_2:-70537245 | Msa0089120:CDS |
| TTGTCAGGTTGTTGGGTCGC+CGG | 0.409507 | 1_2:-70531599 | Msa0089120:intron |
| TTTCGGCGGATCAGACATTC+AGG | 0.411726 | 1_2:+70536884 | None:intergenic |
| CTTAATGAAGTGTTTAATGA+AGG | 0.420141 | 1_2:-70531143 | Msa0089120:three_prime_UTR |
| TATCCAATATGCACTCATAT+AGG | 0.421404 | 1_2:-70534007 | Msa0089120:CDS |
| GATGTTCGTTGTTTATATGT+AGG | 0.423982 | 1_2:-70538132 | Msa0089120:five_prime_UTR |
| TCCGAACCCAGAAGATGTTA+AGG | 0.424389 | 1_2:-70536280 | Msa0089120:CDS |
| CACCTGAGGTCAACAATTAT+CGG | 0.424572 | 1_2:-70536941 | Msa0089120:CDS |
| TAGATGCTCCTGCGAGTGTC+AGG | 0.425661 | 1_2:-70538106 | Msa0089120:five_prime_UTR |
| AATGCCTTTGTCAGGTTGTT+GGG | 0.425861 | 1_2:-70531606 | Msa0089120:intron |
| AATGGTTAGTACTGAAAGTT+GGG | 0.429033 | 1_2:-70531205 | Msa0089120:three_prime_UTR |
| AACGAATTTGCGATATTAGT+AGG | 0.429558 | 1_2:-70535409 | Msa0089120:CDS |
| CAATGGTTAGTACTGAAAGT+TGG | 0.430007 | 1_2:-70531206 | Msa0089120:three_prime_UTR |
| TCAATTAAGGGAACAACATC+AGG | 0.430936 | 1_2:+70538029 | None:intergenic |
| TCAGCGCCTTGGAATCCGTT+TGG | 0.437898 | 1_2:-70535366 | Msa0089120:CDS |
| ACCTGAGGTCAACAATTATC+GGG | 0.439320 | 1_2:-70536940 | Msa0089120:CDS |
| TCAACCATAACCCTCTTGAT+TGG | 0.439386 | 1_2:+70537004 | None:intergenic |
| GAATGCCTTTGTCAGGTTGT+TGG | 0.439548 | 1_2:-70531607 | Msa0089120:intron |
| TTACCGATGGTATTGATTCA+TGG | 0.440119 | 1_2:-70537039 | Msa0089120:CDS |
| ATCTAGACAATGCTAAAGAT+TGG | 0.441776 | 1_2:-70533723 | Msa0089120:intron |
| CCCTTACCATTTCCTCCAAA+CGG | 0.442984 | 1_2:+70535351 | None:intergenic |
| TCTACCTCTTCGGTTCTCTT+CGG | 0.444062 | 1_2:-70531371 | Msa0089120:three_prime_UTR |
| CACACAAACTGAAAATTTCA+AGG | 0.444098 | 1_2:+70531304 | None:intergenic |
| AAGCCACCCCGCACGCCTAA+AGG | 0.451097 | 1_2:+70534048 | None:intergenic |
| TGAATGTCGAAAAGCTTGAT+TGG | 0.453450 | 1_2:-70534214 | Msa0089120:CDS |
| CAAGAATCACTCTACCTCTT+CGG | 0.454499 | 1_2:-70531381 | Msa0089120:three_prime_UTR |
| GATGTTAAGGAATCTGATAT+TGG | 0.455532 | 1_2:-70536267 | Msa0089120:CDS |
| ATCTGATATTGGAGATCTAC+AGG | 0.455603 | 1_2:-70536256 | Msa0089120:intron |
| CATCAGAGGCAATTGGATAT+GGG | 0.465414 | 1_2:-70533678 | Msa0089120:CDS |
| ATATATATGTTACAGATGTT+GGG | 0.467733 | 1_2:-70534190 | Msa0089120:CDS |
| GAGAAAACATCAGAGGCAAT+TGG | 0.470928 | 1_2:-70533685 | Msa0089120:CDS |
| TACTAACCATTGCAAACAGC+GGG | 0.477612 | 1_2:+70531217 | None:intergenic |
| TGCGAGTGTCAGGAAGCAAT+TGG | 0.482845 | 1_2:-70538096 | Msa0089120:five_prime_UTR |
| TTCCATGCCGTGCGATACTT+GGG | 0.484384 | 1_2:+70535431 | None:intergenic |
| CCCCGATAATTGTTGACCTC+AGG | 0.486443 | 1_2:+70536939 | None:intergenic |
| TATCAGGCCTTTAGGCGTGC+GGG | 0.487968 | 1_2:-70534055 | Msa0089120:intron |
| TCCAGTTTCTCCAAAGTTGG+AGG | 0.488329 | 1_2:+70534850 | None:intergenic |
| AGGTATTCACATAACACGTT+TGG | 0.488794 | 1_2:+70531752 | None:intergenic |
| CATGAAGACGAGCGTACATT+GGG | 0.490201 | 1_2:-70532107 | Msa0089120:CDS |
| ATTTGTTGTATGCACATGCT+AGG | 0.493285 | 1_2:-70532443 | Msa0089120:CDS |
| CAACTGATCTAGCATCACTT+TGG | 0.494338 | 1_2:-70534720 | Msa0089120:intron |
| GCCGAAATCATATCGGTGAC+TGG | 0.496211 | 1_2:-70536868 | Msa0089120:CDS |
| CTGATCCGCCGAAATCATAT+CGG | 0.497619 | 1_2:-70536875 | Msa0089120:CDS |
| AACAAGGTCTATCAGCGCCT+TGG | 0.497835 | 1_2:-70535377 | Msa0089120:CDS |
| GGGAACAACATCAGGTTCAG+TGG | 0.503166 | 1_2:+70538037 | None:intergenic |
| TACCGATGGTATTGATTCAT+GGG | 0.505587 | 1_2:-70537038 | Msa0089120:CDS |
| AGATTTCAGACAAATTATAC+AGG | 0.506797 | 1_2:+70531732 | None:intergenic |
| CCTACACTTCTGTGCACTAA+AGG | 0.506816 | 1_2:+70531429 | None:intergenic |
| AAGCATCTGATCAAAGTTGA+AGG | 0.507230 | 1_2:+70532756 | None:intergenic |
| AATGGATTGAAGAAGCTCTC+TGG | 0.510485 | 1_2:+70534877 | None:intergenic |
| CCGAAATCATATCGGTGACT+GGG | 0.513250 | 1_2:-70536867 | Msa0089120:CDS |
| AAGACAATATTGACAAATCC+AGG | 0.513254 | 1_2:+70537220 | None:intergenic |
| CCTTTAGTGCACAGAAGTGT+AGG | 0.514175 | 1_2:-70531429 | Msa0089120:three_prime_UTR |
| TAAGATTAAAGGGAGGCAAC+CGG | 0.516804 | 1_2:-70537424 | Msa0089120:CDS |
| TTAAACATGCTGATTATCAA+TGG | 0.518948 | 1_2:-70537983 | Msa0089120:intron |
| CCAGTTTCTCCAAAGTTGGA+GGG | 0.527284 | 1_2:+70534851 | None:intergenic |
| CTAATTGCTGTGAAAAGAGA+TGG | 0.529201 | 1_2:-70534760 | Msa0089120:CDS |
| TTCAATAATCCTCGTTCAGT+CGG | 0.530105 | 1_2:-70537399 | Msa0089120:CDS |
| GCTCGTGTGATATTTGTTGA+GGG | 0.532483 | 1_2:-70534796 | Msa0089120:CDS |
| GCATGAAGACGAGCGTACAT+TGG | 0.535587 | 1_2:-70532108 | Msa0089120:CDS |
| GCGTGCGGGGTGGCTTCCAA+AGG | 0.540430 | 1_2:-70534041 | Msa0089120:CDS |
| GCGCCTTGGAATCCGTTTGG+AGG | 0.545677 | 1_2:-70535363 | Msa0089120:CDS |
| GCTGTCAGTAGTCGAGCTCC+AGG | 0.546111 | 1_2:-70535582 | Msa0089120:intron |
| CAGCAGCGAGACTGTTCGAT+TGG | 0.548830 | 1_2:-70533939 | Msa0089120:CDS |
| TATCGGTGACTGGGGTACTC+AGG | 0.552888 | 1_2:-70536858 | Msa0089120:intron |
| CTATCAGGCCTTTAGGCGTG+CGG | 0.564893 | 1_2:-70534056 | Msa0089120:intron |
| ACACAAACTGAAAATTTCAA+GGG | 0.566211 | 1_2:+70531305 | None:intergenic |
| TGCTCGTGTGATATTTGTTG+AGG | 0.567259 | 1_2:-70534797 | Msa0089120:CDS |
| ATCCCAAGTATCGCACGGCA+TGG | 0.567410 | 1_2:-70535433 | Msa0089120:CDS |
| AATTGCTTCCTGACACTCGC+AGG | 0.571008 | 1_2:+70538098 | None:intergenic |
| CACGACTCTACCATCTCTGA+TGG | 0.572859 | 1_2:+70537256 | None:intergenic |
| TTTCCTCCAAACGGATTCCA+AGG | 0.574025 | 1_2:+70535360 | None:intergenic |
| GGCGGATCAGACATTCAGGC+TGG | 0.575607 | 1_2:+70536888 | None:intergenic |
| GGTTCGGAAATTTCTCAAAG+AGG | 0.576696 | 1_2:+70536295 | None:intergenic |
| GGTCTTGTTTGTGGTGATGA+CGG | 0.578443 | 1_2:-70533980 | Msa0089120:CDS |
| TCAGGTTGTTGGGTCGCCGG+AGG | 0.579089 | 1_2:-70531596 | Msa0089120:intron |
| ATATTGTCTTATCAAAGAAG+TGG | 0.584478 | 1_2:-70537207 | Msa0089120:CDS |
| TGTATCCCCGCTGTTTGCAA+TGG | 0.585241 | 1_2:-70531223 | Msa0089120:three_prime_UTR |
| AAGAGTCTACTAGTTTCCTC+CGG | 0.585462 | 1_2:+70531580 | None:intergenic |
| ATCAGGCCTTTAGGCGTGCG+GGG | 0.588588 | 1_2:-70534054 | Msa0089120:intron |
| ATCAAAGAAGTGGATATCAA+AGG | 0.589439 | 1_2:-70537197 | Msa0089120:intron |
| TTCTTTGGCTATATTCGGTG+AGG | 0.589957 | 1_2:+70536976 | None:intergenic |
| GACTCTACCATCTCTGATGG+AGG | 0.594180 | 1_2:+70537259 | None:intergenic |
| ATCAGAGGCAATTGGATATG+GGG | 0.594771 | 1_2:-70533677 | Msa0089120:CDS |
| AAATCTCCCTCCATCAGAGA+TGG | 0.596307 | 1_2:-70537266 | Msa0089120:CDS |
| GGAACAACATCAGGTTCAGT+GGG | 0.600044 | 1_2:+70538038 | None:intergenic |
| ACAGACTGGGAATTTGGTGT+TGG | 0.602007 | 1_2:-70532132 | Msa0089120:intron |
| AGGCCTTTAGGCGTGCGGGG+TGG | 0.602232 | 1_2:-70534051 | Msa0089120:CDS |
| ATGTTACAGATGTTGGGCAA+TGG | 0.605623 | 1_2:-70534184 | Msa0089120:CDS |
| TGATCAGATGCTTAATGACA+AGG | 0.609952 | 1_2:-70532746 | Msa0089120:intron |
| TGCCCATGAATCAATACCAT+CGG | 0.610478 | 1_2:+70537036 | None:intergenic |
| TAAACTCCTCATTGAGATAG+CGG | 0.610749 | 1_2:+70531480 | None:intergenic |
| AGACAATGCTAAAGATTGGA+CGG | 0.612359 | 1_2:-70533719 | Msa0089120:CDS |
| TCATTTACTGCAATTTACTG+AGG | 0.613017 | 1_2:-70532081 | Msa0089120:intron |
| CGGGGATACAGCAAGACTGT+TGG | 0.622645 | 1_2:+70531236 | None:intergenic |
| ACCCTCTTGATTGGAAGTCG+AGG | 0.627107 | 1_2:+70537013 | None:intergenic |
| CACCTCGACTTCCAATCAAG+AGG | 0.630058 | 1_2:-70537015 | Msa0089120:CDS |
| ATTGCTGTGAAAAGAGATGG+AGG | 0.640685 | 1_2:-70534757 | Msa0089120:CDS |
| AGAGATTGAGAAAACATCAG+AGG | 0.641877 | 1_2:-70533692 | Msa0089120:CDS |
| AGAGATGGTAGAGTCGTGCT+CGG | 0.644017 | 1_2:-70537251 | Msa0089120:CDS |
| AAATGCATGTTGGTCACCTG+AGG | 0.645066 | 1_2:-70536955 | Msa0089120:CDS |
| ACCTCGACTTCCAATCAAGA+GGG | 0.646268 | 1_2:-70537014 | Msa0089120:CDS |
| AAAGTTGCTCTTCTTGAACG+TGG | 0.655376 | 1_2:-70533884 | Msa0089120:intron |
| ATAGCCAAAGAAATGCATGT+TGG | 0.656561 | 1_2:-70536965 | Msa0089120:CDS |
| ACTCTACCATCTCTGATGGA+GGG | 0.657588 | 1_2:+70537260 | None:intergenic |
| TTATCGGGGACACACTAGCA+CGG | 0.659549 | 1_2:-70536925 | Msa0089120:CDS |
| GGAGGATCCCAAGTATCGCA+CGG | 0.661368 | 1_2:-70535438 | Msa0089120:CDS |
| TAGTAGGACTGAATTTAACA+AGG | 0.663790 | 1_2:-70535393 | Msa0089120:CDS |
| TTACAGAAGATGCTTACCGA+TGG | 0.665354 | 1_2:-70537052 | Msa0089120:CDS |
| CGAAATCATATCGGTGACTG+GGG | 0.673339 | 1_2:-70536866 | Msa0089120:CDS |
| TATACCTCTCCGACTGAACG+AGG | 0.675464 | 1_2:+70537390 | None:intergenic |
| TAATCCTCGTTCAGTCGGAG+AGG | 0.677962 | 1_2:-70537394 | Msa0089120:intron |
| TGCACCGAAGAGAACCGAAG+AGG | 0.685731 | 1_2:+70531367 | None:intergenic |
| TATGATCCGCTATCTCAATG+AGG | 0.688130 | 1_2:-70531486 | Msa0089120:exon |
| AAGCAACACTTATTGTGATG+AGG | 0.689891 | 1_2:-70531549 | Msa0089120:CDS |
| GGGCTGATTGAAGACAATGA+TGG | 0.695452 | 1_2:-70534820 | Msa0089120:CDS |
| GTACTAACCATTGCAAACAG+CGG | 0.700380 | 1_2:+70531216 | None:intergenic |
| TGCATACAACAAATAAACAG+CGG | 0.707344 | 1_2:+70532452 | None:intergenic |
| AGTCACCGATATGATTTCGG+CGG | 0.710948 | 1_2:+70536870 | None:intergenic |
| CCTGAGGTCAACAATTATCG+GGG | 0.712112 | 1_2:-70536939 | Msa0089120:CDS |
| CAATGCTAAAGATTGGACGG+AGG | 0.726729 | 1_2:-70533716 | Msa0089120:CDS |
| GAGAGCTTCCCGAAACAACG+TGG | 0.734240 | 1_2:+70538073 | None:intergenic |
| ACTAACCATTGCAAACAGCG+GGG | 0.762719 | 1_2:+70531218 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATTTATTTATCATTTT+CGG | - | chr1_2:70531165-70531184 | Msa0089120:three_prime_UTR | 10.0% |
| !! | GTCAATAATTAATAAAAAAA+AGG | + | chr1_2:70531986-70532005 | None:intergenic | 10.0% |
| !!! | TTTTTATTAATTATTGACTT+TGG | - | chr1_2:70531988-70532007 | Msa0089120:intron | 10.0% |
| !! | TTTAATAGTTTATGTTTAAA+CGG | - | chr1_2:70532546-70532565 | Msa0089120:intron | 10.0% |
| !!! | AGTTTTTACTTTTAATTTTT+TGG | - | chr1_2:70534641-70534660 | Msa0089120:intron | 10.0% |
| !!! | TTGATATATACTTTATTTTA+AGG | - | chr1_2:70536021-70536040 | Msa0089120:intron | 10.0% |
| !!! | TGTATTTATTTATCATTTTC+GGG | - | chr1_2:70531166-70531185 | Msa0089120:three_prime_UTR | 15.0% |
| !! | TTACACAATTTCATTTAATT+TGG | + | chr1_2:70532804-70532823 | None:intergenic | 15.0% |
| !!! | TGTTTTTTCATATATTTTGT+CGG | - | chr1_2:70533150-70533169 | Msa0089120:intron | 15.0% |
| !!! | TTTTAATTAAAATGATGTCA+AGG | - | chr1_2:70533472-70533491 | Msa0089120:intron | 15.0% |
| !!! | TTTACTTATTCTGAAAATAT+TGG | - | chr1_2:70533652-70533671 | Msa0089120:intron | 15.0% |
| !! | AAAATGATATAAAATTTACC+TGG | + | chr1_2:70533775-70533794 | None:intergenic | 15.0% |
| !!! | TCTTTCTTTTCTTATAATTT+TGG | - | chr1_2:70534048-70534067 | Msa0089120:CDS | 15.0% |
| !!! | CTTTCTTTTCTTATAATTTT+GGG | - | chr1_2:70534049-70534068 | Msa0089120:CDS | 15.0% |
| !! | TTGATAGAATATGTTATATT+TGG | + | chr1_2:70534185-70534204 | None:intergenic | 15.0% |
| !! | ACAATTAGTAGTATTAATTA+AGG | - | chr1_2:70536263-70536282 | Msa0089120:CDS | 15.0% |
| !! | ATGTATTTAGTAATTTGAAA+TGG | - | chr1_2:70536308-70536327 | Msa0089120:CDS | 15.0% |
| !!! | AGATTTTTCTTTTATATTTC+AGG | - | chr1_2:70537532-70537551 | Msa0089120:intron | 15.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | + | chr1_2:70531696-70531715 | None:intergenic | 20.0% |
| !!! | TGATTACGTAAAATTGATTT+TGG | + | chr1_2:70531733-70531752 | None:intergenic | 20.0% |
| !! | ACATAAACTATTAAAACACA+CGG | + | chr1_2:70532541-70532560 | None:intergenic | 20.0% |
| !!! | TTTCATTTAATTTGGATGAA+TGG | + | chr1_2:70532796-70532815 | None:intergenic | 20.0% |
| !!! | GTAAGTAAACATTGTTATTT+TGG | + | chr1_2:70532896-70532915 | None:intergenic | 20.0% |
| !! | AAAATAATTCCTAGATATCT+AGG | + | chr1_2:70533263-70533282 | None:intergenic | 20.0% |
| !! | AAGTAATAACTAGTATCTAT+AGG | + | chr1_2:70533534-70533553 | None:intergenic | 20.0% |
| !! | TACAAAACCAAACATATATA+AGG | + | chr1_2:70534096-70534115 | None:intergenic | 20.0% |
| !! | TGTATCATTAATTATCAACA+AGG | - | chr1_2:70534847-70534866 | Msa0089120:CDS | 20.0% |
| !!! | ACCAAATTTTCAACAAAAAA+CGG | + | chr1_2:70534980-70534999 | None:intergenic | 20.0% |
| !!! | TATTTTTATGAGTATGGAAT+AGG | - | chr1_2:70535021-70535040 | Msa0089120:intron | 20.0% |
| !! | AATATATATGTTACAGATGT+TGG | - | chr1_2:70535145-70535164 | Msa0089120:intron | 20.0% |
| !! | ATATATATGTTACAGATGTT+GGG | - | chr1_2:70535146-70535165 | Msa0089120:intron | 20.0% |
| !! | TAAAAATTGCAATAGGAAAA+TGG | + | chr1_2:70535485-70535504 | None:intergenic | 20.0% |
| !! | GAAGAAATAAAAATTGCAAT+AGG | + | chr1_2:70535492-70535511 | None:intergenic | 20.0% |
| !! | AAACTTCATTTATTTGATTC+TGG | + | chr1_2:70535526-70535545 | None:intergenic | 20.0% |
| !! | GGTTATTATTATCCTTTAAT+GGG | + | chr1_2:70535719-70535738 | None:intergenic | 20.0% |
| !! | TGGTTATTATTATCCTTTAA+TGG | + | chr1_2:70535720-70535739 | None:intergenic | 20.0% |
| !! | TTCTAGCAATAATACATAAA+AGG | - | chr1_2:70535747-70535766 | Msa0089120:intron | 20.0% |
| !! | TCTAGCAATAATACATAAAA+GGG | - | chr1_2:70535748-70535767 | Msa0089120:intron | 20.0% |
| !! | TATCTAATTAAACTAATTGC+CGG | + | chr1_2:70536095-70536114 | None:intergenic | 20.0% |
| !!! | TTTTTTAATCCATGTGAAAT+TGG | + | chr1_2:70536147-70536166 | None:intergenic | 20.0% |
| !!! | TCACATGGATTAAAAAAAAT+AGG | - | chr1_2:70536150-70536169 | Msa0089120:intron | 20.0% |
| !! | TGAAATGGAGATTATATTTA+AGG | - | chr1_2:70536323-70536342 | Msa0089120:intron | 20.0% |
| !!! | ATACTTTTTTCTTTCAAAGA+AGG | - | chr1_2:70536346-70536365 | Msa0089120:intron | 20.0% |
| !!! | TTCATAAATATTTTCTGAGA+GGG | + | chr1_2:70536706-70536725 | None:intergenic | 20.0% |
| !!! | TTTCATAAATATTTTCTGAG+AGG | + | chr1_2:70536707-70536726 | None:intergenic | 20.0% |
| !! | ATTTATGACATTACATTAGT+TGG | + | chr1_2:70536826-70536845 | None:intergenic | 20.0% |
| !! | TAACTATAATATCATCATCA+TGG | + | chr1_2:70536986-70537005 | None:intergenic | 20.0% |
| !!! | TTTTATATTTCAGGTTTTTG+TGG | - | chr1_2:70537541-70537560 | Msa0089120:intron | 20.0% |
| !!! | GTAGGAAATTTTTTTAACAA+TGG | + | chr1_2:70537663-70537682 | None:intergenic | 20.0% |
| !! | TTCATTAAACACTTCATTAA+GGG | + | chr1_2:70538194-70538213 | None:intergenic | 20.0% |
| !!! | ATTTTCGGGTAATGAAATAA+CGG | - | chr1_2:70531180-70531199 | Msa0089120:three_prime_UTR | 25.0% |
| !! | TTAAACATGCTGATTATCAA+TGG | - | chr1_2:70531353-70531372 | Msa0089120:three_prime_UTR | 25.0% |
| ! | ATGATAGCTTATAGCTTATA+TGG | - | chr1_2:70531412-70531431 | Msa0089120:three_prime_UTR | 25.0% |
| ! | TGATAGCTTATAGCTTATAT+GGG | - | chr1_2:70531413-70531432 | Msa0089120:three_prime_UTR | 25.0% |
| ! | CAAACATATGCTTAATTAAG+TGG | + | chr1_2:70531478-70531497 | None:intergenic | 25.0% |
| !!! | TGTTTGCTTGTTTTCAATTT+TGG | - | chr1_2:70531492-70531511 | Msa0089120:exon | 25.0% |
| !!! | AGTTGTAGAGTTATTTTATC+AGG | - | chr1_2:70531536-70531555 | Msa0089120:CDS | 25.0% |
| !!! | TAGAGTTATTTTATCAGGTT+TGG | - | chr1_2:70531541-70531560 | Msa0089120:CDS | 25.0% |
| ! | CAAATAGAATCAATTCTACA+AGG | + | chr1_2:70531591-70531610 | None:intergenic | 25.0% |
| !! | AGTCTTTTTGCTAAGATTAA+AGG | - | chr1_2:70531901-70531920 | Msa0089120:intron | 25.0% |
| !! | GTCTTTTTGCTAAGATTAAA+GGG | - | chr1_2:70531902-70531921 | Msa0089120:intron | 25.0% |
| ! | ATATTGTCTTATCAAAGAAG+TGG | - | chr1_2:70532129-70532148 | Msa0089120:CDS | 25.0% |
| ! | AATAGTTTATGTTTAAACGG+AGG | - | chr1_2:70532549-70532568 | Msa0089120:intron | 25.0% |
| ! | AAAATTATAGCTCAAAGACA+AGG | + | chr1_2:70532650-70532669 | None:intergenic | 25.0% |
| !! | ATCTAGACTATTTTCTCTAT+GGG | + | chr1_2:70532852-70532871 | None:intergenic | 25.0% |
| !! | TATCTAGACTATTTTCTCTA+TGG | + | chr1_2:70532853-70532872 | None:intergenic | 25.0% |
| !!! | AGTAAACATTGTTATTTTGG+TGG | + | chr1_2:70532893-70532912 | None:intergenic | 25.0% |
| ! | TTATAGAACATTCTGTTATG+AGG | - | chr1_2:70532943-70532962 | Msa0089120:intron | 25.0% |
| !!! | GTTCAGATCTGATATTTTTT+TGG | - | chr1_2:70533181-70533200 | Msa0089120:intron | 25.0% |
| !! | TATTATCTATTTAGGTTCTG+TGG | + | chr1_2:70533296-70533315 | None:intergenic | 25.0% |
| ! | GCCTTAAAAAGATAACTAAT+CGG | - | chr1_2:70533348-70533367 | Msa0089120:intron | 25.0% |
| !!! | ACCGATTAGTTATCTTTTTA+AGG | + | chr1_2:70533352-70533371 | None:intergenic | 25.0% |
| !! | TATTCTGAAAATATTGGAGT+TGG | - | chr1_2:70533658-70533677 | Msa0089120:intron | 25.0% |
| !! | ACTATCAAACTTCAATTTTG+AGG | + | chr1_2:70533708-70533727 | None:intergenic | 25.0% |
| ! | AGAAACAAATCAGAAAAAGA+AGG | + | chr1_2:70533802-70533821 | None:intergenic | 25.0% |
| ! | TAGCTCATATATAATCTTGT+TGG | - | chr1_2:70534289-70534308 | Msa0089120:intron | 25.0% |
| !! | TAATAAGAAGTGTATGAGAT+AGG | - | chr1_2:70534762-70534781 | Msa0089120:CDS | 25.0% |
| ! | CAAATTTAAACGTTCCAAAT+TGG | - | chr1_2:70534873-70534892 | Msa0089120:CDS | 25.0% |
| ! | TTCCATACTCATAAAAATAC+AGG | + | chr1_2:70535020-70535039 | None:intergenic | 25.0% |
| ! | AATAGTTTATAGATCTACTG+TGG | - | chr1_2:70535045-70535064 | Msa0089120:intron | 25.0% |
| !!! | ACATTTTGACATGCTTTTTA+AGG | - | chr1_2:70535177-70535196 | Msa0089120:intron | 25.0% |
| ! | TGACAATATCTTAGTCAATT+TGG | + | chr1_2:70535208-70535227 | None:intergenic | 25.0% |
| ! | ATTTACTTGATGAAGCTAAA+AGG | - | chr1_2:70535423-70535442 | Msa0089120:CDS | 25.0% |
| ! | ATAAATGAAGTTTCTGTTTG+TGG | - | chr1_2:70535533-70535552 | Msa0089120:intron | 25.0% |
| !!! | CATACTTTATTGAGTTGAAT+TGG | - | chr1_2:70535909-70535928 | Msa0089120:intron | 25.0% |
| !!! | CTTTTAAAATTCAGTAAGCA+GGG | + | chr1_2:70535958-70535977 | None:intergenic | 25.0% |
| !!! | ACTTTTAAAATTCAGTAAGC+AGG | + | chr1_2:70535959-70535978 | None:intergenic | 25.0% |
| !! | AGTTAACAAGATTTTCTAAC+CGG | - | chr1_2:70536073-70536092 | Msa0089120:intron | 25.0% |
| !! | CAATGTGTCTATTTTGTATA+TGG | - | chr1_2:70536179-70536198 | Msa0089120:intron | 25.0% |
| ! | TTCAAAGAAGGCTTATATTT+AGG | - | chr1_2:70536358-70536377 | Msa0089120:intron | 25.0% |
| ! | TCAAAGAAGGCTTATATTTA+GGG | - | chr1_2:70536359-70536378 | Msa0089120:intron | 25.0% |
| !!! | TCATAAATATTTTCTGAGAG+GGG | + | chr1_2:70536705-70536724 | None:intergenic | 25.0% |
| ! | TTAACAAATGTTGATCTTGA+AGG | - | chr1_2:70536791-70536810 | Msa0089120:intron | 25.0% |
| !! | ATTACATTAGTTGGTTTCAT+GGG | + | chr1_2:70536817-70536836 | None:intergenic | 25.0% |
| ! | AGACATAGAAGAACTAAAAA+AGG | - | chr1_2:70536945-70536964 | Msa0089120:CDS | 25.0% |
| ! | TATATACATGTATTATGCCT+AGG | - | chr1_2:70537047-70537066 | Msa0089120:CDS | 25.0% |
| ! | AGATTTCAGACAAATTATAC+AGG | + | chr1_2:70537607-70537626 | None:intergenic | 25.0% |
| !!! | TTTTTTTAACAATGGATACC+TGG | + | chr1_2:70537655-70537674 | None:intergenic | 25.0% |
| ! | TACACATCAAATAGGAATAT+GGG | + | chr1_2:70537702-70537721 | None:intergenic | 25.0% |
| ! | ATACACATCAAATAGGAATA+TGG | + | chr1_2:70537703-70537722 | None:intergenic | 25.0% |
| ! | CACATTAATACACATCAAAT+AGG | + | chr1_2:70537710-70537729 | None:intergenic | 25.0% |
| !! | TGACACTAATTTTATTGACA+AGG | - | chr1_2:70538008-70538027 | Msa0089120:five_prime_UTR | 25.0% |
| ! | ACACAAACTGAAAATTTCAA+GGG | + | chr1_2:70538034-70538053 | None:intergenic | 25.0% |
| ! | CTTCATTAAACACTTCATTA+AGG | + | chr1_2:70538195-70538214 | None:intergenic | 25.0% |
| !! | CTTAATGAAGTGTTTAATGA+AGG | - | chr1_2:70538193-70538212 | Msa0089120:five_prime_UTR | 25.0% |
| GATGTTCGTTGTTTATATGT+AGG | - | chr1_2:70531204-70531223 | Msa0089120:three_prime_UTR | 30.0% | |
| !! | TTGCTTGTTTTCAATTTTGG+AGG | - | chr1_2:70531495-70531514 | Msa0089120:exon | 30.0% |
| !! | TGCTTGTTTTCAATTTTGGA+GGG | - | chr1_2:70531496-70531515 | Msa0089120:exon | 30.0% |
| ATCAGGTTTGGATGATTTAA+AGG | - | chr1_2:70531553-70531572 | Msa0089120:CDS | 30.0% | |
| TGGATGTATTTATGTCAAAG+TGG | + | chr1_2:70531676-70531695 | None:intergenic | 30.0% | |
| TAAACAGCTTAGTGTATGTA+TGG | + | chr1_2:70531789-70531808 | None:intergenic | 30.0% | |
| !!! | GTTTTAGTTGCACTATACAT+TGG | - | chr1_2:70531827-70531846 | Msa0089120:intron | 30.0% |
| ! | TTTTTGCTAAGATTAAAGGG+AGG | - | chr1_2:70531905-70531924 | Msa0089120:intron | 30.0% |
| AAGACAATATTGACAAATCC+AGG | + | chr1_2:70532119-70532138 | None:intergenic | 30.0% | |
| ATCAAAGAAGTGGATATCAA+AGG | - | chr1_2:70532139-70532158 | Msa0089120:intron | 30.0% | |
| CATAATCCAAACAACACATA+GGG | + | chr1_2:70532232-70532251 | None:intergenic | 30.0% | |
| TGCATTTCTTTGGCTATATT+CGG | + | chr1_2:70532368-70532387 | None:intergenic | 30.0% | |
| ATTCACAACCTTATGTCTTT+GGG | - | chr1_2:70532674-70532693 | Msa0089120:intron | 30.0% | |
| !! | AACCATTTCTAGTTGTCTTT+GGG | - | chr1_2:70532712-70532731 | Msa0089120:intron | 30.0% |
| ATAGCTGATGTAATGTAAGT+AGG | - | chr1_2:70532739-70532758 | Msa0089120:intron | 30.0% | |
| !!! | CATGCATTTATTTTGCAGTT+CGG | - | chr1_2:70533003-70533022 | Msa0089120:intron | 30.0% |
| !!! | ATGCATTTATTTTGCAGTTC+GGG | - | chr1_2:70533004-70533023 | Msa0089120:intron | 30.0% |
| GATGTTAAGGAATCTGATAT+TGG | - | chr1_2:70533069-70533088 | Msa0089120:intron | 30.0% | |
| ! | TCATACCAGTTTTCTTTTGT+AGG | - | chr1_2:70533127-70533146 | Msa0089120:intron | 30.0% |
| AAACACCTACAAAAGAAAAC+TGG | + | chr1_2:70533135-70533154 | None:intergenic | 30.0% | |
| GCGGCTTATATTATCTATTT+AGG | + | chr1_2:70533304-70533323 | None:intergenic | 30.0% | |
| !! | AGATAACTAATCGGTTTTCT+TGG | - | chr1_2:70533357-70533376 | Msa0089120:intron | 30.0% |
| AGGTGTGAATTCAGAAATAA+AGG | - | chr1_2:70533492-70533511 | Msa0089120:intron | 30.0% | |
| GAATTCAGAAATAAAGGTTC+AGG | - | chr1_2:70533498-70533517 | Msa0089120:intron | 30.0% | |
| CAATAAACATTGCAACTTCA+AGG | + | chr1_2:70533576-70533595 | None:intergenic | 30.0% | |
| CTTGAAGTTGCAATGTTTAT+TGG | - | chr1_2:70533574-70533593 | Msa0089120:intron | 30.0% | |
| !! | GCATTTTTAGGCATTCTATA+AGG | - | chr1_2:70533682-70533701 | Msa0089120:CDS | 30.0% |
| TGATCCTGATTTCAAGAAAA+AGG | - | chr1_2:70533727-70533746 | Msa0089120:intron | 30.0% | |
| !!! | CTGAATTTTGATTTCAGAGT+GGG | - | chr1_2:70533876-70533895 | Msa0089120:intron | 30.0% |
| !!! | TGAATTTTGATTTCAGAGTG+GGG | - | chr1_2:70533877-70533896 | Msa0089120:intron | 30.0% |
| AACGAATTTGCGATATTAGT+AGG | - | chr1_2:70533927-70533946 | Msa0089120:CDS | 30.0% | |
| TAGTAGGACTGAATTTAACA+AGG | - | chr1_2:70533943-70533962 | Msa0089120:CDS | 30.0% | |
| ATCTGTGCCTTATATATGTT+TGG | - | chr1_2:70534086-70534105 | Msa0089120:intron | 30.0% | |
| ! | GTAGAAATTCTGTCTGTTTT+TGG | - | chr1_2:70534113-70534132 | Msa0089120:intron | 30.0% |
| TGGTTGCTTGATTTAACATT+AGG | - | chr1_2:70534251-70534270 | Msa0089120:intron | 30.0% | |
| ! | TATGTTTTACTGTTCACTGA+TGG | - | chr1_2:70534417-70534436 | Msa0089120:intron | 30.0% |
| ! | ATGTTTTACTGTTCACTGAT+GGG | - | chr1_2:70534418-70534437 | Msa0089120:intron | 30.0% |
| !!! | TTCCAAATTGGTTTTGTGAT+AGG | - | chr1_2:70534885-70534904 | Msa0089120:intron | 30.0% |
| ATCCTATCACAAAACCAATT+TGG | + | chr1_2:70534890-70534909 | None:intergenic | 30.0% | |
| !!! | GCCGTTTTTTGTTGAAAATT+TGG | - | chr1_2:70534976-70534995 | Msa0089120:intron | 30.0% |
| !! | TGCCTGTATTTTTATGAGTA+TGG | - | chr1_2:70535015-70535034 | Msa0089120:intron | 30.0% |
| ! | TAAATGTCTAACTTCCCTTT+TGG | - | chr1_2:70535252-70535271 | Msa0089120:intron | 30.0% |
| GTGCATATTGGATATTCATT+TGG | + | chr1_2:70535323-70535342 | None:intergenic | 30.0% | |
| TATCCAATATGCACTCATAT+AGG | - | chr1_2:70535329-70535348 | Msa0089120:intron | 30.0% | |
| AAACCTATATGAGTGCATAT+TGG | + | chr1_2:70535335-70535354 | None:intergenic | 30.0% | |
| ! | ATATGCACTCATATAGGTTT+TGG | - | chr1_2:70535335-70535354 | Msa0089120:intron | 30.0% |
| AGATGAACATAGGATTTAGA+AGG | + | chr1_2:70535597-70535616 | None:intergenic | 30.0% | |
| ATCTAGACAATGCTAAAGAT+TGG | - | chr1_2:70535613-70535632 | Msa0089120:CDS | 30.0% | |
| ! | CACTAACATTTTCCCATTAA+AGG | - | chr1_2:70535704-70535723 | Msa0089120:intron | 30.0% |
| ! | ATTATTGCTAGAAAGCATGT+TGG | + | chr1_2:70535740-70535759 | None:intergenic | 30.0% |
| ! | GGAATTTTAAGCAGTATATC+TGG | + | chr1_2:70535937-70535956 | None:intergenic | 30.0% |
| ATCCATGTGAAATTGGAAAA+AGG | + | chr1_2:70536140-70536159 | None:intergenic | 30.0% | |
| GAACACACTCATATACAAAA+GGG | + | chr1_2:70536219-70536238 | None:intergenic | 30.0% | |
| TGAACACACTCATATACAAA+AGG | + | chr1_2:70536220-70536239 | None:intergenic | 30.0% | |
| ! | GTTGCTTCTATAAATGGTTT+TGG | - | chr1_2:70536410-70536429 | Msa0089120:intron | 30.0% |
| !! | CAAAAGCATTAACATGATGA+TGG | + | chr1_2:70536510-70536529 | None:intergenic | 30.0% |
| ! | CATCATCATGTTAATGCTTT+TGG | - | chr1_2:70536508-70536527 | Msa0089120:intron | 30.0% |
| GAAAGCAATTGTCAATCAAA+AGG | + | chr1_2:70536751-70536770 | None:intergenic | 30.0% | |
| ! | CATTACATTAGTTGGTTTCA+TGG | + | chr1_2:70536818-70536837 | None:intergenic | 30.0% |
| ! | GTAAGACAAAAAGCATAGAA+AGG | + | chr1_2:70536855-70536874 | None:intergenic | 30.0% |
| !! | TTCTATGCTTTTTGTCTTAC+AGG | - | chr1_2:70536855-70536874 | Msa0089120:intron | 30.0% |
| !! | TCTATGCTTTTTGTCTTACA+GGG | - | chr1_2:70536856-70536875 | Msa0089120:intron | 30.0% |
| TGCATACAACAAATAAACAG+CGG | + | chr1_2:70536887-70536906 | None:intergenic | 30.0% | |
| TTTACCAGATTTCCTGATAA+TGG | + | chr1_2:70536926-70536945 | None:intergenic | 30.0% | |
| ATGATCTACTCATAAAACCT+AGG | + | chr1_2:70537067-70537086 | None:intergenic | 30.0% | |
| !! | TAGGTTTTATGAGTAGATCA+TGG | - | chr1_2:70537066-70537085 | Msa0089120:intron | 30.0% |
| TCATTTACTGCAATTTACTG+AGG | - | chr1_2:70537255-70537274 | Msa0089120:CDS | 30.0% | |
| TTCTTGAGATTTAACCTTTC+AGG | - | chr1_2:70537284-70537303 | Msa0089120:intron | 30.0% | |
| ! | CAGTCTTTTCTTAAGGAAAA+TGG | + | chr1_2:70537345-70537364 | None:intergenic | 30.0% |
| ! | TTTTCCTTAAGAAAAGACTG+AGG | - | chr1_2:70537345-70537364 | Msa0089120:intron | 30.0% |
| ! | CTTGTAGTGTTTTACTTTGT+CGG | - | chr1_2:70537389-70537408 | Msa0089120:intron | 30.0% |
| !! | CCTTAGTCTTTTCATAAAGA+TGG | + | chr1_2:70537422-70537441 | None:intergenic | 30.0% |
| CCATCTTTATGAAAAGACTA+AGG | - | chr1_2:70537419-70537438 | Msa0089120:CDS | 30.0% | |
| !!! | GAAATTTTATTCAAGTTGCC+AGG | - | chr1_2:70537634-70537653 | Msa0089120:intron | 30.0% |
| ACACATCAAATAGGAATATG+GGG | + | chr1_2:70537701-70537720 | None:intergenic | 30.0% | |
| !!! | GAGTTTAAGAGCAAGTTTTT+TGG | - | chr1_2:70537872-70537891 | Msa0089120:intron | 30.0% |
| CACACAAACTGAAAATTTCA+AGG | + | chr1_2:70538035-70538054 | None:intergenic | 30.0% | |
| ! | CTTGAAATTTTCAGTTTGTG+TGG | - | chr1_2:70538033-70538052 | Msa0089120:five_prime_UTR | 30.0% |
| ! | AATGGTTAGTACTGAAAGTT+GGG | - | chr1_2:70538131-70538150 | Msa0089120:five_prime_UTR | 30.0% |
| TCAATTAAGGGAACAACATC+AGG | + | chr1_2:70531310-70531329 | None:intergenic | 35.0% | |
| GGAACACAAGCATCAATTAA+GGG | + | chr1_2:70531322-70531341 | None:intergenic | 35.0% | |
| TGGAACACAAGCATCAATTA+AGG | + | chr1_2:70531323-70531342 | None:intergenic | 35.0% | |
| GATGCTTGTGTTCCAAAAAA+CGG | - | chr1_2:70531328-70531347 | Msa0089120:three_prime_UTR | 35.0% | |
| !!! | GCATGTTTAACACCGTTTTT+TGG | + | chr1_2:70531343-70531362 | None:intergenic | 35.0% |
| TTAGTGTATGTATGGTTTCG+TGG | + | chr1_2:70531781-70531800 | None:intergenic | 35.0% | |
| GAACGAGGATTATTGAATTC+CGG | + | chr1_2:70531934-70531953 | None:intergenic | 35.0% | |
| TTCAATAATCCTCGTTCAGT+CGG | - | chr1_2:70531937-70531956 | Msa0089120:intron | 35.0% | |
| !! | GTGTGTGTTTTTGTTTGTGT+AGG | - | chr1_2:70532037-70532056 | Msa0089120:intron | 35.0% |
| ! | TGGAGGGAGATTTTTCATAA+TGG | + | chr1_2:70532063-70532082 | None:intergenic | 35.0% |
| TTGTGTGTCCTCAAATTTCT+AGG | - | chr1_2:70532181-70532200 | Msa0089120:intron | 35.0% | |
| GCATAATCCAAACAACACAT+AGG | + | chr1_2:70532233-70532252 | None:intergenic | 35.0% | |
| !! | TTACCGATGGTATTGATTCA+TGG | - | chr1_2:70532297-70532316 | Msa0089120:intron | 35.0% |
| !! | TACCGATGGTATTGATTCAT+GGG | - | chr1_2:70532298-70532317 | Msa0089120:intron | 35.0% |
| ATAGCCAAAGAAATGCATGT+TGG | - | chr1_2:70532371-70532390 | Msa0089120:intron | 35.0% | |
| CTCAAAGACAAGGTTATGTA+TGG | + | chr1_2:70532640-70532659 | None:intergenic | 35.0% | |
| CATTCACAACCTTATGTCTT+TGG | - | chr1_2:70532673-70532692 | Msa0089120:intron | 35.0% | |
| !! | CAACCATTTCTAGTTGTCTT+TGG | - | chr1_2:70532711-70532730 | Msa0089120:intron | 35.0% |
| ATCCCAAAGACAACTAGAAA+TGG | + | chr1_2:70532717-70532736 | None:intergenic | 35.0% | |
| ! | TAGACTATTTTCTCTATGGG+TGG | + | chr1_2:70532849-70532868 | None:intergenic | 35.0% |
| TGGTGGCAATTGAAATAGTT+CGG | + | chr1_2:70532876-70532895 | None:intergenic | 35.0% | |
| CGAACTGCAAAATAAATGCA+TGG | + | chr1_2:70533005-70533024 | None:intergenic | 35.0% | |
| CAGATTCCTTAACATCTTCT+GGG | + | chr1_2:70533065-70533084 | None:intergenic | 35.0% | |
| TCAGATTCCTTAACATCTTC+TGG | + | chr1_2:70533066-70533085 | None:intergenic | 35.0% | |
| ATCTGATATTGGAGATCTAC+AGG | - | chr1_2:70533080-70533099 | Msa0089120:intron | 35.0% | |
| !!! | TTTTTGGTTAACTAGCTGCA+TGG | - | chr1_2:70533197-70533216 | Msa0089120:intron | 35.0% |
| CTATGCATTCCTAGATATCT+AGG | - | chr1_2:70533251-70533270 | Msa0089120:intron | 35.0% | |
| !!! | TATAAGCCGCTACTTTTTCA+CGG | - | chr1_2:70533314-70533333 | Msa0089120:intron | 35.0% |
| TAGTATCTATAGGCAAACAC+AGG | + | chr1_2:70533524-70533543 | None:intergenic | 35.0% | |
| ! | TCATCGTTATTTAGCTTCGA+TGG | - | chr1_2:70533621-70533640 | Msa0089120:intron | 35.0% |
| !!! | ATTGGAGTTGGTGCATTTTT+AGG | - | chr1_2:70533670-70533689 | Msa0089120:CDS | 35.0% |
| ! | TGTGCCTTTTTCTTGAAATC+AGG | + | chr1_2:70533734-70533753 | None:intergenic | 35.0% |
| !! | CCACTCTGAAATCAAAATTC+AGG | + | chr1_2:70533878-70533897 | None:intergenic | 35.0% |
| !!! | CCTGAATTTTGATTTCAGAG+TGG | - | chr1_2:70533875-70533894 | Msa0089120:intron | 35.0% |
| ! | TTTCTTTTGTATCTCCGATG+AGG | - | chr1_2:70534014-70534033 | Msa0089120:CDS | 35.0% |
| AGAGATGAGAAATTCCTCAT+CGG | + | chr1_2:70534031-70534050 | None:intergenic | 35.0% | |
| !!! | AATTCTGTCTGTTTTTGGTG+TGG | - | chr1_2:70534118-70534137 | Msa0089120:intron | 35.0% |
| !! | GGCTTTTGTTTAATATGACG+TGG | - | chr1_2:70534139-70534158 | Msa0089120:intron | 35.0% |
| ATTTATGTTGCAGTCGTTAC+AGG | - | chr1_2:70534368-70534387 | Msa0089120:intron | 35.0% | |
| TTGGAGAAACTGGAGAAATT+AGG | - | chr1_2:70534495-70534514 | Msa0089120:intron | 35.0% | |
| TGGAGAAACTGGAGAAATTA+GGG | - | chr1_2:70534496-70534515 | Msa0089120:intron | 35.0% | |
| ! | TCTCTTTTCACAGCAATTAG+TGG | + | chr1_2:70534576-70534595 | None:intergenic | 35.0% |
| CTAATTGCTGTGAAAAGAGA+TGG | - | chr1_2:70534576-70534595 | Msa0089120:intron | 35.0% | |
| ! | AGAAGTGTATGAGATAGGTT+AGG | - | chr1_2:70534767-70534786 | Msa0089120:CDS | 35.0% |
| TTACCTTCAAGTCTGACTAT+CGG | + | chr1_2:70534812-70534831 | None:intergenic | 35.0% | |
| GACTTGAAGGTAAATCACAA+AGG | - | chr1_2:70534819-70534838 | Msa0089120:CDS | 35.0% | |
| !!! | TCCCTTTTGGTTTTTCTATC+AGG | - | chr1_2:70535265-70535284 | Msa0089120:intron | 35.0% |
| GCCTGATAGAAAAACCAAAA+GGG | + | chr1_2:70535269-70535288 | None:intergenic | 35.0% | |
| GGATATTCATTTGGATCCTT+TGG | + | chr1_2:70535314-70535333 | None:intergenic | 35.0% | |
| !!! | ATAGGTTTTGGTCTTGTTTG+TGG | - | chr1_2:70535347-70535366 | Msa0089120:intron | 35.0% |
| TTCTGTTTGTGGAAGATCTA+TGG | - | chr1_2:70535544-70535563 | Msa0089120:intron | 35.0% | |
| AGCATTGTCTAGATGAACAT+AGG | + | chr1_2:70535607-70535626 | None:intergenic | 35.0% | |
| AGACAATGCTAAAGATTGGA+CGG | - | chr1_2:70535617-70535636 | Msa0089120:CDS | 35.0% | |
| AGAGATTGAGAAAACATCAG+AGG | - | chr1_2:70535644-70535663 | Msa0089120:CDS | 35.0% | |
| TAATACATAAAAGGGCAACC+CGG | - | chr1_2:70535756-70535775 | Msa0089120:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1_2:70535848-70535867 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1_2:70535847-70535866 | Msa0089120:intron | 35.0% |
| ! | TGCTTTTCATTCTGCTCTAA+TGG | - | chr1_2:70535987-70536006 | Msa0089120:intron | 35.0% |
| AAAAAGGAGCTTATTTGCGA+AGG | + | chr1_2:70536124-70536143 | None:intergenic | 35.0% | |
| ! | CTCCTTTTTCCAATTTCACA+TGG | - | chr1_2:70536135-70536154 | Msa0089120:intron | 35.0% |
| AAGCATCTGATCAAAGTTGA+AGG | + | chr1_2:70536583-70536602 | None:intergenic | 35.0% | |
| TGATCAGATGCTTAATGACA+AGG | - | chr1_2:70536590-70536609 | Msa0089120:intron | 35.0% | |
| !! | ATTTGTTGTATGCACATGCT+AGG | - | chr1_2:70536893-70536912 | Msa0089120:CDS | 35.0% |
| TGTTCCATTATCAGGAAATC+TGG | - | chr1_2:70536919-70536938 | Msa0089120:CDS | 35.0% | |
| TTTCTTAAGGAAAATGGACC+AGG | + | chr1_2:70537339-70537358 | None:intergenic | 35.0% | |
| ATGTCAGTGCATATGTTGTT+TGG | + | chr1_2:70537511-70537530 | None:intergenic | 35.0% | |
| AGGTATTCACATAACACGTT+TGG | + | chr1_2:70537587-70537606 | None:intergenic | 35.0% | |
| ATCAAATAGGAATATGGGGA+GGG | + | chr1_2:70537697-70537716 | None:intergenic | 35.0% | |
| TTAATGTGAATGCCTTTGTC+AGG | - | chr1_2:70537722-70537741 | Msa0089120:intron | 35.0% | |
| AAGCAACACTTATTGTGATG+AGG | - | chr1_2:70537787-70537806 | Msa0089120:intron | 35.0% | |
| !! | AGGCATTGCTTTTATCTTCT+TGG | - | chr1_2:70537807-70537826 | Msa0089120:intron | 35.0% |
| TAAACTCCTCATTGAGATAG+CGG | + | chr1_2:70537859-70537878 | None:intergenic | 35.0% | |
| ! | CAATGGTTAGTACTGAAAGT+TGG | - | chr1_2:70538130-70538149 | Msa0089120:five_prime_UTR | 35.0% |
| TAAAACGCTAAGTGGGTGTT+TGG | + | chr1_2:70531813-70531832 | None:intergenic | 40.0% | |
| GTGCAACTAAAACGCTAAGT+GGG | + | chr1_2:70531820-70531839 | None:intergenic | 40.0% | |
| AGTGCAACTAAAACGCTAAG+TGG | + | chr1_2:70531821-70531840 | None:intergenic | 40.0% | |
| TAAGATTAAAGGGAGGCAAC+CGG | - | chr1_2:70531912-70531931 | Msa0089120:intron | 40.0% | |
| ! | AACGCTAGCCTAGAAATTTG+AGG | + | chr1_2:70532192-70532211 | None:intergenic | 40.0% |
| ! | TTGTCTCCCTATGTGTTGTT+TGG | - | chr1_2:70532223-70532242 | Msa0089120:intron | 40.0% |
| TTACAGAAGATGCTTACCGA+TGG | - | chr1_2:70532284-70532303 | Msa0089120:intron | 40.0% | |
| TGCCCATGAATCAATACCAT+CGG | + | chr1_2:70532303-70532322 | None:intergenic | 40.0% | |
| ACTTCCAATCAAGAGGGTTA+TGG | - | chr1_2:70532328-70532347 | Msa0089120:intron | 40.0% | |
| TCAACCATAACCCTCTTGAT+TGG | + | chr1_2:70532335-70532354 | None:intergenic | 40.0% | |
| ! | TTCTTTGGCTATATTCGGTG+AGG | + | chr1_2:70532363-70532382 | None:intergenic | 40.0% |
| GTGACCAACATGCATTTCTT+TGG | + | chr1_2:70532378-70532397 | None:intergenic | 40.0% | |
| CACCTGAGGTCAACAATTAT+CGG | - | chr1_2:70532395-70532414 | Msa0089120:CDS | 40.0% | |
| ACCTGAGGTCAACAATTATC+GGG | - | chr1_2:70532396-70532415 | Msa0089120:CDS | 40.0% | |
| TGCTATACACTGTCAAAGCT+AGG | - | chr1_2:70532606-70532625 | Msa0089120:intron | 40.0% | |
| AAGAATCGCCCAAAGACATA+AGG | + | chr1_2:70532685-70532704 | None:intergenic | 40.0% | |
| GGTTCGGAAATTTCTCAAAG+AGG | + | chr1_2:70533044-70533063 | None:intergenic | 40.0% | |
| TCCTTAACATCTTCTGGGTT+CGG | + | chr1_2:70533060-70533079 | None:intergenic | 40.0% | |
| TCTACAGGTGAGACAACATA+TGG | - | chr1_2:70533095-70533114 | Msa0089120:intron | 40.0% | |
| ACTGTTCCGTGAAAAAGTAG+CGG | + | chr1_2:70533323-70533342 | None:intergenic | 40.0% | |
| !!! | ATTTTGATTTCAGAGTGGGG+AGG | - | chr1_2:70533880-70533899 | Msa0089120:intron | 40.0% |
| ! | TCTTTTTCCTTGCTCTGTGA+TGG | - | chr1_2:70534215-70534234 | Msa0089120:CDS | 40.0% |
| CTCTGTGATGGTCATAAGTT+TGG | - | chr1_2:70534227-70534246 | Msa0089120:intron | 40.0% | |
| ! | TCACTGATGGGCGATATATT+TGG | - | chr1_2:70534430-70534449 | Msa0089120:intron | 40.0% |
| !! | AATGGATTGAAGAAGCTCTC+TGG | + | chr1_2:70534462-70534481 | None:intergenic | 40.0% |
| TCCATTAATCCCTCCAACTT+TGG | - | chr1_2:70534476-70534495 | Msa0089120:intron | 40.0% | |
| TCCAAAGTTGGAGGGATTAA+TGG | + | chr1_2:70534480-70534499 | None:intergenic | 40.0% | |
| TTCTCCAGTTTCTCCAAAGT+TGG | + | chr1_2:70534492-70534511 | None:intergenic | 40.0% | |
| ! | TGCTCGTGTGATATTTGTTG+AGG | - | chr1_2:70534539-70534558 | Msa0089120:intron | 40.0% |
| ! | GCTCGTGTGATATTTGTTGA+GGG | - | chr1_2:70534540-70534559 | Msa0089120:intron | 40.0% |
| ATTGCTGTGAAAAGAGATGG+AGG | - | chr1_2:70534579-70534598 | Msa0089120:intron | 40.0% | |
| CAACTGATCTAGCATCACTT+TGG | - | chr1_2:70534616-70534635 | Msa0089120:intron | 40.0% | |
| TGACTATCGGAATACCCTTT+GGG | + | chr1_2:70534799-70534818 | None:intergenic | 40.0% | |
| ATTCCGATAGTCAGACTTGA+AGG | - | chr1_2:70534806-70534825 | Msa0089120:CDS | 40.0% | |
| ATGCAAGGTTCAAGTGGTTA+AGG | + | chr1_2:70535090-70535109 | None:intergenic | 40.0% | |
| ATGTTACAGATGTTGGGCAA+TGG | - | chr1_2:70535152-70535171 | Msa0089120:intron | 40.0% | |
| GGCCTGATAGAAAAACCAAA+AGG | + | chr1_2:70535270-70535289 | None:intergenic | 40.0% | |
| ! | GGTTTTTCTATCAGGCCTTT+AGG | - | chr1_2:70535273-70535292 | Msa0089120:intron | 40.0% |
| AAAGTTGCTCTTCTTGAACG+TGG | - | chr1_2:70535452-70535471 | Msa0089120:intron | 40.0% | |
| !! | TTTGATTCTGGCTCACATGA+AGG | + | chr1_2:70535514-70535533 | None:intergenic | 40.0% |
| GAGAAAACATCAGAGGCAAT+TGG | - | chr1_2:70535651-70535670 | Msa0089120:intron | 40.0% | |
| ACATCAGAGGCAATTGGATA+TGG | - | chr1_2:70535657-70535676 | Msa0089120:intron | 40.0% | |
| CATCAGAGGCAATTGGATAT+GGG | - | chr1_2:70535658-70535677 | Msa0089120:intron | 40.0% | |
| ATCAGAGGCAATTGGATATG+GGG | - | chr1_2:70535659-70535678 | Msa0089120:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1_2:70535822-70535841 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1_2:70535853-70535872 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1_2:70535854-70535873 | None:intergenic | 40.0% | |
| AGGCTTATATTTAGGGACTG+AGG | - | chr1_2:70536366-70536385 | Msa0089120:intron | 40.0% | |
| GGTAGTTAAAAACCGACACA+CGG | - | chr1_2:70536387-70536406 | Msa0089120:intron | 40.0% | |
| GTAGTTAAAAACCGACACAC+GGG | - | chr1_2:70536388-70536407 | Msa0089120:intron | 40.0% | |
| ! | ACACGGGTTGCTTCTATAAA+TGG | - | chr1_2:70536404-70536423 | Msa0089120:intron | 40.0% |
| ATTCAGCATTCCAAGAACAG+AGG | + | chr1_2:70536470-70536489 | None:intergenic | 40.0% | |
| !! | AATATTTTCTGAGAGGGGAG+CGG | + | chr1_2:70536700-70536719 | None:intergenic | 40.0% |
| CTAGGATCTGTTCCATTATC+AGG | - | chr1_2:70536911-70536930 | Msa0089120:CDS | 40.0% | |
| TTTACCAACTTGTGACAGAC+TGG | - | chr1_2:70537190-70537209 | Msa0089120:intron | 40.0% | |
| TTACCAACTTGTGACAGACT+GGG | - | chr1_2:70537191-70537210 | Msa0089120:intron | 40.0% | |
| CTCTGCAAAAATAGCCTGAA+AGG | + | chr1_2:70537301-70537320 | None:intergenic | 40.0% | |
| TTAAGGAAAATGGACCAGGA+TGG | + | chr1_2:70537335-70537354 | None:intergenic | 40.0% | |
| ! | CATGCCTCAGTCTTTTCTTA+AGG | + | chr1_2:70537352-70537371 | None:intergenic | 40.0% |
| ! | AGTGTTTTACTTTGTCGGTC+TGG | - | chr1_2:70537394-70537413 | Msa0089120:intron | 40.0% |
| ! | GTGTTTTACTTTGTCGGTCT+GGG | - | chr1_2:70537395-70537414 | Msa0089120:CDS | 40.0% |
| TAAGCGACTATATGTTCACG+CGG | - | chr1_2:70537451-70537470 | Msa0089120:exon | 40.0% | |
| CATCAAATAGGAATATGGGG+AGG | + | chr1_2:70537698-70537717 | None:intergenic | 40.0% | |
| ! | AATGCCTTTGTCAGGTTGTT+GGG | - | chr1_2:70537730-70537749 | Msa0089120:intron | 40.0% |
| ! | AAGAGTCTACTAGTTTCCTC+CGG | + | chr1_2:70537759-70537778 | None:intergenic | 40.0% |
| ! | GCGGATCATAACTTGTAAAC+TGG | + | chr1_2:70537840-70537859 | None:intergenic | 40.0% |
| TATGATCCGCTATCTCAATG+AGG | - | chr1_2:70537850-70537869 | Msa0089120:intron | 40.0% | |
| CAAGAATCACTCTACCTCTT+CGG | - | chr1_2:70537955-70537974 | Msa0089120:intron | 40.0% | |
| TACTAACCATTGCAAACAGC+GGG | + | chr1_2:70538122-70538141 | None:intergenic | 40.0% | |
| GTACTAACCATTGCAAACAG+CGG | + | chr1_2:70538123-70538142 | None:intergenic | 40.0% | |
| AGCAATTGGCCACGTTGTTT+CGG | - | chr1_2:70531254-70531273 | Msa0089120:three_prime_UTR | 45.0% | |
| GGAACAACATCAGGTTCAGT+GGG | + | chr1_2:70531301-70531320 | None:intergenic | 45.0% | |
| AAATCTCCCTCCATCAGAGA+TGG | - | chr1_2:70532070-70532089 | Msa0089120:intron | 45.0% | |
| ACTCTACCATCTCTGATGGA+GGG | + | chr1_2:70532079-70532098 | None:intergenic | 45.0% | |
| TCTTCTGTAAGCTCTGCAGA+AGG | + | chr1_2:70532274-70532293 | None:intergenic | 45.0% | |
| ACCTCGACTTCCAATCAAGA+GGG | - | chr1_2:70532322-70532341 | Msa0089120:intron | 45.0% | |
| AAATGCATGTTGGTCACCTG+AGG | - | chr1_2:70532381-70532400 | Msa0089120:intron | 45.0% | |
| CCTGAGGTCAACAATTATCG+GGG | - | chr1_2:70532397-70532416 | Msa0089120:CDS | 45.0% | |
| CTGATCCGCCGAAATCATAT+CGG | - | chr1_2:70532461-70532480 | Msa0089120:CDS | 45.0% | |
| AGTCACCGATATGATTTCGG+CGG | + | chr1_2:70532469-70532488 | None:intergenic | 45.0% | |
| CCCAGTCACCGATATGATTT+CGG | + | chr1_2:70532472-70532491 | None:intergenic | 45.0% | |
| CCGAAATCATATCGGTGACT+GGG | - | chr1_2:70532469-70532488 | Msa0089120:intron | 45.0% | |
| CGAAATCATATCGGTGACTG+GGG | - | chr1_2:70532470-70532489 | Msa0089120:intron | 45.0% | |
| TCCGAACCCAGAAGATGTTA+AGG | - | chr1_2:70533056-70533075 | Msa0089120:intron | 45.0% | |
| ! | TTTCCTCCAAACGGATTCCA+AGG | + | chr1_2:70533979-70533998 | None:intergenic | 45.0% |
| TGGAATCCGTTTGGAGGAAA+TGG | - | chr1_2:70533979-70533998 | Msa0089120:CDS | 45.0% | |
| TCCGTTTGGAGGAAATGGTA+AGG | - | chr1_2:70533984-70534003 | Msa0089120:CDS | 45.0% | |
| CCCTTACCATTTCCTCCAAA+CGG | + | chr1_2:70533988-70534007 | None:intergenic | 45.0% | |
| CCGTTTGGAGGAAATGGTAA+GGG | - | chr1_2:70533985-70534004 | Msa0089120:CDS | 45.0% | |
| GGCACAGATAGAATTCTGAG+AGG | + | chr1_2:70534075-70534094 | None:intergenic | 45.0% | |
| CTTATGACCATCACAGAGCA+AGG | + | chr1_2:70534225-70534244 | None:intergenic | 45.0% | |
| GTGATGGTCATAAGTTTGGC+TGG | - | chr1_2:70534231-70534250 | Msa0089120:intron | 45.0% | |
| CCAGTTTCTCCAAAGTTGGA+GGG | + | chr1_2:70534488-70534507 | None:intergenic | 45.0% | |
| TCCAGTTTCTCCAAAGTTGG+AGG | + | chr1_2:70534489-70534508 | None:intergenic | 45.0% | |
| GGGCTGATTGAAGACAATGA+TGG | - | chr1_2:70534516-70534535 | Msa0089120:intron | 45.0% | |
| TAGGTTAGGTGAAGACCCAA+AGG | - | chr1_2:70534781-70534800 | Msa0089120:CDS | 45.0% | |
| AGGTTAGGTGAAGACCCAAA+GGG | - | chr1_2:70534782-70534801 | Msa0089120:CDS | 45.0% | |
| CTGACTATCGGAATACCCTT+TGG | + | chr1_2:70534800-70534819 | None:intergenic | 45.0% | |
| TAGTGTTTGCTTCGCGTATC+TGG | - | chr1_2:70534911-70534930 | Msa0089120:intron | 45.0% | |
| !! | GGTCTTGTTTGTGGTGATGA+CGG | - | chr1_2:70535356-70535375 | Msa0089120:intron | 45.0% |
| CAATGCTAAAGATTGGACGG+AGG | - | chr1_2:70535620-70535639 | Msa0089120:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1_2:70535823-70535842 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1_2:70535826-70535845 | None:intergenic | 45.0% | |
| CTGCTCTAATGGTTCGAATC+TGG | - | chr1_2:70535998-70536017 | Msa0089120:intron | 45.0% | |
| AAGGAGCTTATTTGCGAAGG+AGG | + | chr1_2:70536121-70536140 | None:intergenic | 45.0% | |
| TATAGAAGCAACCCGTGTGT+CGG | + | chr1_2:70536402-70536421 | None:intergenic | 45.0% | |
| TCTGCTTATGCCTCTGTTCT+TGG | - | chr1_2:70536457-70536476 | Msa0089120:intron | 45.0% | |
| !! | ATATTTTCTGAGAGGGGAGC+GGG | + | chr1_2:70536699-70536718 | None:intergenic | 45.0% |
| ATTCCCAGTCTGTCACAAGT+TGG | + | chr1_2:70537197-70537216 | None:intergenic | 45.0% | |
| CTTGTGACAGACTGGGAATT+TGG | - | chr1_2:70537198-70537217 | Msa0089120:CDS | 45.0% | |
| !! | ACAGACTGGGAATTTGGTGT+TGG | - | chr1_2:70537204-70537223 | Msa0089120:CDS | 45.0% |
| CATGAAGACGAGCGTACATT+GGG | - | chr1_2:70537229-70537248 | Msa0089120:CDS | 45.0% | |
| GAGTTCTTCTTTGTCCATCC+TGG | - | chr1_2:70537318-70537337 | Msa0089120:intron | 45.0% | |
| AAGCGACTATATGTTCACGC+GGG | - | chr1_2:70537452-70537471 | Msa0089120:intron | 45.0% | |
| ! | GAATGCCTTTGTCAGGTTGT+TGG | - | chr1_2:70537729-70537748 | Msa0089120:intron | 45.0% |
| CCTACACTTCTGTGCACTAA+AGG | + | chr1_2:70537910-70537929 | None:intergenic | 45.0% | |
| ! | CCTTTAGTGCACAGAAGTGT+AGG | - | chr1_2:70537907-70537926 | Msa0089120:intron | 45.0% |
| TCTACCTCTTCGGTTCTCTT+CGG | - | chr1_2:70537965-70537984 | Msa0089120:intron | 45.0% | |
| ACTAACCATTGCAAACAGCG+GGG | + | chr1_2:70538121-70538140 | None:intergenic | 45.0% | |
| !!! | TTTTAATTAAAAAATGAAAA+TGG | + | chr1_2:70533464-70533483 | None:intergenic | 5.0% |
| AATTGCTTCCTGACACTCGC+AGG | + | chr1_2:70531241-70531260 | None:intergenic | 50.0% | |
| TGCGAGTGTCAGGAAGCAAT+TGG | - | chr1_2:70531240-70531259 | Msa0089120:three_prime_UTR | 50.0% | |
| ! | GCAATTGGCCACGTTGTTTC+GGG | - | chr1_2:70531255-70531274 | Msa0089120:three_prime_UTR | 50.0% |
| GGGAACAACATCAGGTTCAG+TGG | + | chr1_2:70531302-70531321 | None:intergenic | 50.0% | |
| TAATCCTCGTTCAGTCGGAG+AGG | - | chr1_2:70531942-70531961 | Msa0089120:intron | 50.0% | |
| TATACCTCTCCGACTGAACG+AGG | + | chr1_2:70531949-70531968 | None:intergenic | 50.0% | |
| GACTCTACCATCTCTGATGG+AGG | + | chr1_2:70532080-70532099 | None:intergenic | 50.0% | |
| CACGACTCTACCATCTCTGA+TGG | + | chr1_2:70532083-70532102 | None:intergenic | 50.0% | |
| AGAGATGGTAGAGTCGTGCT+CGG | - | chr1_2:70532085-70532104 | Msa0089120:CDS | 50.0% | |
| CACCTCGACTTCCAATCAAG+AGG | - | chr1_2:70532321-70532340 | Msa0089120:intron | 50.0% | |
| ACCCTCTTGATTGGAAGTCG+AGG | + | chr1_2:70532326-70532345 | None:intergenic | 50.0% | |
| CCCCGATAATTGTTGACCTC+AGG | + | chr1_2:70532400-70532419 | None:intergenic | 50.0% | |
| TTATCGGGGACACACTAGCA+CGG | - | chr1_2:70532411-70532430 | Msa0089120:CDS | 50.0% | |
| TTTCGGCGGATCAGACATTC+AGG | + | chr1_2:70532455-70532474 | None:intergenic | 50.0% | |
| GCCGAAATCATATCGGTGAC+TGG | - | chr1_2:70532468-70532487 | Msa0089120:intron | 50.0% | |
| CTTTCTGCCCCCTATTTGCA+AGG | - | chr1_2:70533820-70533839 | Msa0089120:intron | 50.0% | |
| TCCCCACGACCTTGCAAATA+GGG | + | chr1_2:70533832-70533851 | None:intergenic | 50.0% | |
| TTCCCCACGACCTTGCAAAT+AGG | + | chr1_2:70533833-70533852 | None:intergenic | 50.0% | |
| TTTGCAAGGTCGTGGGGAAT+TGG | - | chr1_2:70533834-70533853 | Msa0089120:intron | 50.0% | |
| TTCCATGCCGTGCGATACTT+GGG | + | chr1_2:70533908-70533927 | None:intergenic | 50.0% | |
| TTTCCATGCCGTGCGATACT+TGG | + | chr1_2:70533909-70533928 | None:intergenic | 50.0% | |
| AACAAGGTCTATCAGCGCCT+TGG | - | chr1_2:70533959-70533978 | Msa0089120:CDS | 50.0% | |
| TTGAAGAAGCTCTCTGGCTG+TGG | + | chr1_2:70534456-70534475 | None:intergenic | 50.0% | |
| ! | CCCTCCAACTTTGGAGAAAC+TGG | - | chr1_2:70534485-70534504 | Msa0089120:intron | 50.0% |
| AAAAGCCTCTTTCCTTCCCG+AGG | + | chr1_2:70534937-70534956 | None:intergenic | 50.0% | |
| ACCACTTGAACCTTGCATGC+AGG | - | chr1_2:70535092-70535111 | Msa0089120:intron | 50.0% | |
| ACCTGCATGCAAGGTTCAAG+TGG | + | chr1_2:70535096-70535115 | None:intergenic | 50.0% | |
| TCAGACGATACCTGCATGCA+AGG | + | chr1_2:70535105-70535124 | None:intergenic | 50.0% | |
| GCATGAAGACGAGCGTACAT+TGG | - | chr1_2:70537228-70537247 | Msa0089120:CDS | 50.0% | |
| TGTATCCCCGCTGTTTGCAA+TGG | - | chr1_2:70538113-70538132 | Msa0089120:five_prime_UTR | 50.0% | |
| TAGATGCTCCTGCGAGTGTC+AGG | - | chr1_2:70531230-70531249 | Msa0089120:three_prime_UTR | 55.0% | |
| GAGAGCTTCCCGAAACAACG+TGG | + | chr1_2:70531266-70531285 | None:intergenic | 55.0% | |
| ! | TATCGGTGACTGGGGTACTC+AGG | - | chr1_2:70532478-70532497 | Msa0089120:intron | 55.0% |
| CCCACGACCTTGCAAATAGG+GGG | + | chr1_2:70533830-70533849 | None:intergenic | 55.0% | |
| CCCCCTATTTGCAAGGTCGT+GGG | - | chr1_2:70533827-70533846 | Msa0089120:intron | 55.0% | |
| CCCCACGACCTTGCAAATAG+GGG | + | chr1_2:70533831-70533850 | None:intergenic | 55.0% | |
| CCCCTATTTGCAAGGTCGTG+GGG | - | chr1_2:70533828-70533847 | Msa0089120:intron | 55.0% | |
| ! | GGAGGATCCCAAGTATCGCA+CGG | - | chr1_2:70533898-70533917 | Msa0089120:CDS | 55.0% |
| ! | ATCCCAAGTATCGCACGGCA+TGG | - | chr1_2:70533903-70533922 | Msa0089120:CDS | 55.0% |
| TCAGCGCCTTGGAATCCGTT+TGG | - | chr1_2:70533970-70533989 | Msa0089120:CDS | 55.0% | |
| TTGCTTCGCGTATCTGGCCT+CGG | - | chr1_2:70534917-70534936 | Msa0089120:intron | 55.0% | |
| CTATCAGGCCTTTAGGCGTG+CGG | - | chr1_2:70535280-70535299 | Msa0089120:intron | 55.0% | |
| TATCAGGCCTTTAGGCGTGC+GGG | - | chr1_2:70535281-70535300 | Msa0089120:intron | 55.0% | |
| CAGCAGCGAGACTGTTCGAT+TGG | - | chr1_2:70535397-70535416 | Msa0089120:CDS | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr1_2:70535782-70535801 | Msa0089120:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr1_2:70535783-70535802 | Msa0089120:intron | 55.0% | |
| !! | GGGAGGGCATTCAAACTCGT+AGG | + | chr1_2:70537681-70537700 | None:intergenic | 55.0% |
| GCGACCCAACAACCTGACAA+AGG | + | chr1_2:70537737-70537756 | None:intergenic | 55.0% | |
| ! | TTGTCAGGTTGTTGGGTCGC+CGG | - | chr1_2:70537737-70537756 | Msa0089120:intron | 55.0% |
| TGCACCGAAGAGAACCGAAG+AGG | + | chr1_2:70537972-70537991 | None:intergenic | 55.0% | |
| CGGGGATACAGCAAGACTGT+TGG | + | chr1_2:70538103-70538122 | None:intergenic | 55.0% | |
| GGTAGAGTCGTGCTCGGTTG+CGG | - | chr1_2:70532091-70532110 | Msa0089120:CDS | 60.0% | |
| GTAGAGTCGTGCTCGGTTGC+GGG | - | chr1_2:70532092-70532111 | Msa0089120:CDS | 60.0% | |
| GGCGGATCAGACATTCAGGC+TGG | + | chr1_2:70532451-70532470 | None:intergenic | 60.0% | |
| ! | GGTGACTGGGGTACTCAGGT+AGG | - | chr1_2:70532482-70532501 | Msa0089120:intron | 60.0% |
| GCTGTCAGTAGTCGAGCTCC+AGG | - | chr1_2:70533754-70533773 | Msa0089120:intron | 60.0% | |
| GCCCCCTATTTGCAAGGTCG+TGG | - | chr1_2:70533826-70533845 | Msa0089120:intron | 60.0% | |
| GCGCCTTGGAATCCGTTTGG+AGG | - | chr1_2:70533973-70533992 | Msa0089120:CDS | 60.0% | |
| TGCTTCGCGTATCTGGCCTC+GGG | - | chr1_2:70534918-70534937 | Msa0089120:intron | 60.0% | |
| TCTGGCCTCGGGAAGGAAAG+AGG | - | chr1_2:70534929-70534948 | Msa0089120:intron | 60.0% | |
| ATCAGGCCTTTAGGCGTGCG+GGG | - | chr1_2:70535282-70535301 | Msa0089120:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1_2:70535778-70535797 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr1_2:70535794-70535813 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr1_2:70535795-70535814 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr1_2:70535794-70535813 | Msa0089120:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr1_2:70535795-70535814 | Msa0089120:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1_2:70535810-70535829 | None:intergenic | 60.0% |
| TCGCGTATCTGGCCTCGGGA+AGG | - | chr1_2:70534922-70534941 | Msa0089120:intron | 65.0% | |
| AAGCCACCCCGCACGCCTAA+AGG | + | chr1_2:70535291-70535310 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1_2:70535777-70535796 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr1_2:70535788-70535807 | Msa0089120:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr1_2:70535789-70535808 | Msa0089120:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr1_2:70535793-70535812 | Msa0089120:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1_2:70535808-70535827 | Msa0089120:intron | 65.0% | |
| AGGGGAGCGGGACAGATCTG+GGG | + | chr1_2:70536687-70536706 | None:intergenic | 65.0% | |
| GAGGGGAGCGGGACAGATCT+GGG | + | chr1_2:70536688-70536707 | None:intergenic | 65.0% | |
| AGAGGGGAGCGGGACAGATC+TGG | + | chr1_2:70536689-70536708 | None:intergenic | 65.0% | |
| ! | TCAGGTTGTTGGGTCGCCGG+AGG | - | chr1_2:70537740-70537759 | Msa0089120:intron | 65.0% |
| TCGTGCTCGGTTGCGGGTCC+TGG | - | chr1_2:70532098-70532117 | Msa0089120:CDS | 70.0% | |
| AGGCCTTTAGGCGTGCGGGG+TGG | - | chr1_2:70535285-70535304 | Msa0089120:intron | 70.0% | |
| GCGTGCGGGGTGGCTTCCAA+AGG | - | chr1_2:70535295-70535314 | Msa0089120:intron | 70.0% | |
| GGGGAGCGGGACAGATCTGG+GGG | + | chr1_2:70536686-70536705 | None:intergenic | 70.0% | |
| ! | GCGGGCGTGCATGCGCGCGC+TGG | - | chr1_2:70537470-70537489 | Msa0089120:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 70531139 | 70538219 | 70531139 | ID=Msa0089120;Name=Msa0089120 |
| chr1_2 | mRNA | 70531139 | 70538219 | 70531139 | ID=Msa0089120-mRNA-1;Parent=Msa0089120;Name=Msa0089120-mRNA-1;_AED=0.19;_eAED=0.19;_QI=246|1|1|1|1|1|16|365|540 |
| chr1_2 | exon | 70531139 | 70531614 | 70531139 | ID=Msa0089120-mRNA-1:exon:24287;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70531703 | 70531804 | 70531703 | ID=Msa0089120-mRNA-1:exon:24286;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70532082 | 70532150 | 70532082 | ID=Msa0089120-mRNA-1:exon:24285;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70532392 | 70532481 | 70532392 | ID=Msa0089120-mRNA-1:exon:24284;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70532747 | 70532816 | 70532747 | ID=Msa0089120-mRNA-1:exon:24283;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70533670 | 70533739 | 70533670 | ID=Msa0089120-mRNA-1:exon:24282;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70533885 | 70534071 | 70533885 | ID=Msa0089120-mRNA-1:exon:24281;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70534160 | 70534244 | 70534160 | ID=Msa0089120-mRNA-1:exon:24280;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70534721 | 70534899 | 70534721 | ID=Msa0089120-mRNA-1:exon:24279;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70535358 | 70535465 | 70535358 | ID=Msa0089120-mRNA-1:exon:24278;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70535583 | 70535666 | 70535583 | ID=Msa0089120-mRNA-1:exon:24277;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70536257 | 70536337 | 70536257 | ID=Msa0089120-mRNA-1:exon:24276;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70536859 | 70537077 | 70536859 | ID=Msa0089120-mRNA-1:exon:24275;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70537198 | 70537299 | 70537198 | ID=Msa0089120-mRNA-1:exon:24274;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70537395 | 70537470 | 70537395 | ID=Msa0089120-mRNA-1:exon:24273;Parent=Msa0089120-mRNA-1 |
| chr1_2 | exon | 70537984 | 70538219 | 70537984 | ID=Msa0089120-mRNA-1:exon:24272;Parent=Msa0089120-mRNA-1 |
| chr1_2 | five_prime_UTR | 70537984 | 70538219 | 70537984 | ID=Msa0089120-mRNA-1:five_prime_utr;Parent=Msa0089120-mRNA-1 |
| chr1_2 | five_prime_UTR | 70537461 | 70537470 | 70537461 | ID=Msa0089120-mRNA-1:five_prime_utr;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70537395 | 70537460 | 70537395 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70537198 | 70537299 | 70537198 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70536859 | 70537077 | 70536859 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70536257 | 70536337 | 70536257 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70535583 | 70535666 | 70535583 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70535358 | 70535465 | 70535358 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70534721 | 70534899 | 70534721 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70534160 | 70534244 | 70534160 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70533885 | 70534071 | 70533885 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70533670 | 70533739 | 70533670 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70532747 | 70532816 | 70532747 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70532392 | 70532481 | 70532392 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70532082 | 70532150 | 70532082 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70531703 | 70531804 | 70531703 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | CDS | 70531504 | 70531614 | 70531504 | ID=Msa0089120-mRNA-1:cds;Parent=Msa0089120-mRNA-1 |
| chr1_2 | three_prime_UTR | 70531139 | 70531503 | 70531139 | ID=Msa0089120-mRNA-1:three_prime_utr;Parent=Msa0089120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
