AlfalfaGEDB | Msa0822580

M. sativa cultivar zhongmu-4 / Msa0822580

KEGG: K02882
GO: GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF01775.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0822580	NP_001365661.1	100.000	178	0	0	1	178	1	178	3.25e-129	370

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0822580	sp\|Q9ATF5\|RL18A_CASSA	89.888	178	18	0	1	178	1	178	4.25e-119	337

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0822580	B7FJC3	100.000	178	0	0	1	178	1	178	1.55e-129	370

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0822580	0.807039	6.141937e-50	-8.615850e-47
Msa0003330	Msa0822580	0.864584	1.094283e-64	-8.615850e-47
Msa0027590	Msa0822580	0.859631	3.618825e-63	-8.615850e-47
Msa0032780	Msa0822580	0.816904	4.347917e-52	-8.615850e-47
Msa0065110	Msa0822580	0.817398	3.367332e-52	-8.615850e-47
Msa0072570	Msa0822580	0.826930	2.069570e-54	-8.615850e-47
Msa0075350	Msa0822580	0.850203	1.976753e-60	-8.615850e-47
Msa0077320	Msa0822580	0.836965	6.869564e-57	-8.615850e-47
Msa0079590	Msa0822580	0.805874	1.081438e-49	-8.615850e-47
Msa0089120	Msa0822580	0.824779	6.707639e-54	-8.615850e-47
Msa0100420	Msa0822580	0.831431	1.676361e-55	-8.615850e-47
Msa0114570	Msa0822580	0.843358	1.472215e-58	-8.615850e-47
Msa0604960	Msa0822580	0.845475	3.969215e-59	-8.615850e-47
Msa0617540	Msa0822580	0.822864	1.885839e-53	-8.615850e-47
Msa0619230	Msa0822580	0.805913	1.061193e-49	-8.615850e-47
Msa0622230	Msa0822580	0.814806	1.277316e-51	-8.615850e-47
Msa0623370	Msa0822580	0.810160	1.323637e-50	-8.615850e-47
Msa0643820	Msa0822580	0.801594	8.364973e-49	-8.615850e-47
Msa0681220	Msa0822580	0.829044	6.415841e-55	-8.615850e-47
Msa0705800	Msa0822580	0.907478	4.854263e-81	-8.615850e-47
Msa0712610	Msa0822580	0.870382	1.522581e-66	-8.615850e-47
Msa0748350	Msa0822580	0.802710	4.930732e-49	-8.615850e-47
Msa0752910	Msa0822580	0.833425	5.371457e-56	-8.615850e-47
Msa0758420	Msa0822580	0.871113	8.747680e-67	-8.615850e-47
Msa0776890	Msa0822580	0.846718	1.821625e-59	-8.615850e-47
Msa0781080	Msa0822580	0.859723	3.395457e-63	-8.615850e-47
Msa0781310	Msa0822580	0.810949	8.936328e-51	-8.615850e-47
Msa0786650	Msa0822580	0.811108	8.255088e-51	-8.615850e-47
Msa0786660	Msa0822580	0.859455	4.088623e-63	-8.615850e-47
Msa0788380	Msa0822580	0.878855	2.002345e-69	-8.615850e-47
Msa0792420	Msa0822580	0.820168	7.907802e-53	-8.615850e-47
Msa0799830	Msa0822580	0.810314	1.225641e-50	-8.615850e-47
Msa0821070	Msa0822580	0.815429	9.286777e-52	-8.615850e-47
Msa0822580	Msa0838070	0.867307	1.506728e-65	-8.615850e-47
Msa0822580	Msa0858010	0.837155	6.142269e-57	-8.615850e-47
Msa0822580	Msa0861320	0.832640	8.425294e-56	-8.615850e-47
Msa0822580	Msa0915540	0.863987	1.680407e-64	-8.615850e-47
Msa0822580	Msa0929700	0.833123	6.388549e-56	-8.615850e-47
Msa0822580	Msa0929790	0.833580	4.914021e-56	-8.615850e-47
Msa0822580	Msa0945480	0.806084	9.767127e-50	-8.615850e-47
Msa0822580	Msa0966670	0.807370	5.225671e-50	-8.615850e-47
Msa0822580	Msa1021120	0.832910	7.216766e-56	-8.615850e-47
Msa0822580	Msa1037290	0.900988	4.219573e-78	-8.615850e-47
Msa0822580	Msa1040160	0.822776	1.977130e-53	-8.615850e-47
Msa0822580	Msa1041680	0.847802	9.181844e-60	-8.615850e-47
Msa0822580	Msa1042100	0.809972	1.452764e-50	-8.615850e-47
Msa0822580	Msa1054280	0.816569	5.169027e-52	-8.615850e-47
Msa0822580	Msa1058700	0.822582	2.193625e-53	-8.615850e-47
Msa0822580	Msa1080350	0.818228	2.187407e-52	-8.615850e-47
Msa0822580	Msa1082170	0.920833	7.749684e-88	-8.615850e-47
Msa0822580	Msa1083370	0.816886	4.387723e-52	-8.615850e-47
Msa0822580	Msa1096900	0.804103	2.536800e-49	-8.615850e-47
Msa0822580	Msa1115590	0.804971	1.672064e-49	-8.615850e-47
Msa0822580	Msa1125860	0.805654	1.202355e-49	-8.615850e-47
Msa0822580	Msa1126060	0.804119	2.516980e-49	-8.615850e-47
Msa0822580	Msa1126520	0.921499	3.306706e-88	-8.615850e-47
Msa0822580	Msa1164150	0.911207	7.894852e-83	-8.615850e-47
Msa0822580	Msa1165640	0.820855	5.501770e-53	-8.615850e-47
Msa0822580	Msa1166570	0.851161	1.062625e-60	-8.615850e-47
Msa0822580	Msa1186030	0.890694	7.812774e-74	-8.615850e-47
Msa0822580	Msa1218170	0.899240	2.411229e-77	-8.615850e-47
Msa0822580	Msa1236980	0.825616	4.254689e-54	-8.615850e-47
Msa0822580	Msa1240270	0.892835	1.099745e-74	-8.615850e-47
Msa0822580	Msa1256840	0.828738	7.609069e-55	-8.615850e-47
Msa0822580	Msa1258540	0.838633	2.560475e-57	-8.615850e-47
Msa0822580	Msa1263620	0.806710	7.207768e-50	-8.615850e-47
Msa0822580	Msa1278070	0.835155	1.978468e-56	-8.615850e-47
Msa0822580	Msa1301640	0.825190	5.365070e-54	-8.615850e-47
Msa0822580	Msa1311400	0.858521	7.779493e-63	-8.615850e-47
Msa0822580	Msa1332250	0.824708	6.974163e-54	-8.615850e-47
Msa0822580	Msa1351020	0.819275	1.264786e-52	-8.615850e-47
Msa0822580	Msa1352140	0.822797	1.954565e-53	-8.615850e-47
Msa0822580	Msa1356790	0.860992	1.402196e-63	-8.615850e-47
Msa0822580	Msa1362790	0.825107	5.614120e-54	-8.615850e-47
Msa0822580	Msa1368920	0.901713	2.027593e-78	-8.615850e-47
Msa0822580	Msa1374240	0.863831	1.879322e-64	-8.615850e-47
Msa0822580	Msa1374480	0.801583	8.409861e-49	-8.615850e-47
Msa0822580	Msa1390760	0.800605	1.332386e-48	-8.615850e-47
Msa0822580	Msa1392590	0.857156	1.977230e-62	-8.615850e-47
Msa0822580	Msa1403910	0.825831	3.782533e-54	-8.615850e-47
Msa0822580	Msa1406080	0.806929	6.478662e-50	-8.615850e-47
Msa0822580	Msa1418770	0.857560	1.501534e-62	-8.615850e-47
Msa0822580	Msa1446410	0.858980	5.674999e-63	-8.615850e-47
Msa0822580	Msa1449160	0.836054	1.171569e-56	-8.615850e-47
Msa0822580	Msa1463580	0.808399	3.157263e-50	-8.615850e-47
Msa0128750	Msa0822580	0.800204	1.608641e-48	-8.615850e-47
Msa0134580	Msa0822580	0.802929	4.442803e-49	-8.615850e-47
Msa0138890	Msa0822580	0.871669	5.730829e-67	-8.615850e-47
Msa0167860	Msa0822580	0.825764	3.923048e-54	-8.615850e-47
Msa0168320	Msa0822580	0.812905	3.350457e-51	-8.615850e-47
Msa0172930	Msa0822580	0.825394	4.801460e-54	-8.615850e-47
Msa0175000	Msa0822580	0.800714	1.266303e-48	-8.615850e-47
Msa0191450	Msa0822580	0.895721	7.323655e-76	-8.615850e-47
Msa0191550	Msa0822580	0.870373	1.532750e-66	-8.615850e-47
Msa0192750	Msa0822580	0.810939	8.981337e-51	-8.615850e-47
Msa0194940	Msa0822580	0.837185	6.033906e-57	-8.615850e-47
Msa0210360	Msa0822580	0.808387	3.174890e-50	-8.615850e-47
Msa0229150	Msa0822580	0.825293	5.072417e-54	-8.615850e-47
Msa0233550	Msa0822580	0.810124	1.347005e-50	-8.615850e-47
Msa0369410	Msa0822580	0.801000	1.107026e-48	-8.615850e-47
Msa0376830	Msa0822580	0.843015	1.816724e-58	-8.615850e-47
Msa0377520	Msa0822580	0.817151	3.826710e-52	-8.615850e-47
Msa0426090	Msa0822580	0.831347	1.757202e-55	-8.615850e-47
Msa0436750	Msa0822580	0.830896	2.267645e-55	-8.615850e-47
Msa0472480	Msa0822580	0.834028	3.798813e-56	-8.615850e-47
Msa0473570	Msa0822580	0.806085	9.761168e-50	-8.615850e-47
Msa0481520	Msa0822580	0.873553	1.344932e-67	-8.615850e-47
Msa0481850	Msa0822580	0.834457	2.964513e-56	-8.615850e-47
Msa0239420	Msa0822580	0.854024	1.620988e-61	-8.615850e-47
Msa0281370	Msa0822580	0.830613	2.660818e-55	-8.615850e-47
Msa0297830	Msa0822580	0.828472	8.821560e-55	-8.615850e-47
Msa0315430	Msa0822580	0.813953	1.971451e-51	-8.615850e-47
Msa0321270	Msa0822580	0.826186	3.114465e-54	-8.615850e-47
Msa0333910	Msa0822580	0.808149	3.568339e-50	-8.615850e-47
Msa0334030	Msa0822580	0.835604	1.523071e-56	-8.615850e-47
Msa0334140	Msa0822580	0.810493	1.121396e-50	-8.615850e-47
Msa0335840	Msa0822580	0.834664	2.630564e-56	-8.615850e-47
Msa0484730	Msa0822580	0.813510	2.468344e-51	-8.615850e-47
Msa0517480	Msa0822580	0.839924	1.184105e-57	-8.615850e-47
Msa0546030	Msa0822580	0.829515	4.930860e-55	-8.615850e-47
Msa0573550	Msa0822580	0.840802	6.981267e-58	-8.615850e-47
Msa0582070	Msa0822580	0.842354	2.722250e-58	-8.615850e-47
Msa0584030	Msa0822580	0.825948	3.547890e-54	-8.615850e-47
Msa0591050	Msa0822580	0.834310	3.228041e-56	-8.615850e-47
Msa0596370	Msa0822580	0.814282	1.668148e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0822580	MtrunA17_Chr5g0442931	100.000	178	0	1	178	1	178	2.99e-133	370
Msa0822580	MtrunA17_Chr5g0442901	100.000	178	0	1	178	1	178	2.99e-133	370
Msa0822580	MtrunA17_Chr2g0328821	100.000	178	0	1	178	17	194	3.33e-133	370
Msa0822580	MtrunA17_Chr3g0095911	94.382	178	10	1	178	1	178	2.58e-125	350
Msa0822580	MtrunA17_Chr2g0286131	62.353	85	32	92	176	1	85	2.93e-34	117

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0822580	AT2G34480.1	90.230	174	17	5	178	5	178	3.01e-119	335
Msa0822580	AT2G34480.2	90.230	174	17	5	178	44	217	3.24e-119	336
Msa0822580	AT1G29965.1	87.079	178	23	1	178	1	178	1.24e-117	330
Msa0822580	AT3G14600.1	87.079	178	23	1	178	1	178	4.20e-117	329
Msa0822580	AT1G29970.2	89.017	173	19	6	178	140	312	1.08e-114	328

Find 70 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACCAGAGGGAACTTGATTT+TGG	0.187302	5_3:-61010499	None:intergenic
AACAGAGACTTACCAGAATT+TGG	0.195659	5_3:-61008870	None:intergenic
CATAAACAGGTTGGGCTTCT+TGG	0.201042	5_3:-61010571	None:intergenic
AGATTAAGAACTATGGAATT+TGG	0.243479	5_3:+61010277	Msa0822580:CDS
GAAAAGCAATGGACAAGTTT+TGG	0.246012	5_3:+61009018	Msa0822580:CDS
GTTGGGCTTCTTGGCTTTGT+AGG	0.248408	5_3:-61010562	None:intergenic
AGTGGAGTTGCTTGATTTAT+CGG	0.302374	5_3:+61010618	Msa0822580:three_prime_UTR
GAAACAGTTTCACCAGTATC+AGG	0.313338	5_3:+61008757	Msa0822580:intron
AGATTTATCGTATGAAGCTT+TGG	0.340515	5_3:+61008822	Msa0822580:CDS
GACTTACCAGAATTTGGATT+TGG	0.342784	5_3:-61008864	None:intergenic
GCTCATTCGGTACGAGCATC+TGG	0.342905	5_3:-61010890	None:intergenic
GATTTATCGTATGAAGCTTT+GGG	0.356570	5_3:+61008823	Msa0822580:CDS
ACGAGATGGCATCTCGTCAT+AGG	0.358917	5_3:+61010388	Msa0822580:CDS
CCTACCAAGATTAAGAACTA+TGG	0.366976	5_3:+61010270	Msa0822580:CDS
TTCGTGCCAAATCCAAATTC+TGG	0.381119	5_3:+61008858	Msa0822580:CDS
CGATCACTTTGTTTCAAAGT+AGG	0.382486	5_3:+61010817	Msa0822580:three_prime_UTR
TCCCGGCTAATTTGTGCAAA+AGG	0.385678	5_3:+61010451	Msa0822580:CDS
GCTGGTTGTAGCTGTCTAAA+AGG	0.390634	5_3:-61008580	None:intergenic
AATTCCATAGTTCTTAATCT+TGG	0.403701	5_3:-61010274	None:intergenic
ATTCACTGAATCACATAAAC+AGG	0.404006	5_3:-61010584	None:intergenic
CCCTTCCGACAACCTGATAC+TGG	0.407388	5_3:-61008769	None:intergenic
GTAATTGTGTCCAGCCTTGT+AGG	0.407715	5_3:+61010949	Msa0822580:three_prime_UTR
AGCTTCATACGATAAATCTT+AGG	0.433968	5_3:-61008818	None:intergenic
TACCGTGATACTACTCTAAA+CGG	0.441043	5_3:+61010345	Msa0822580:CDS
GGATTTGGCACGAACCTCAT+TGG	0.442665	5_3:-61008849	None:intergenic
AGTCTTAATGATTTGAATGC+AGG	0.447032	5_3:-61010421	None:intergenic
GATCACTTTGTTTCAAAGTA+GGG	0.457736	5_3:+61010818	Msa0822580:three_prime_UTR
TTTCTTAAGGAAGTTGAAGA+AGG	0.460521	5_3:+61008991	Msa0822580:CDS
CTCTGGTGTACAAGAAGATT+AGG	0.461451	5_3:+61010514	Msa0822580:CDS
ATTGTTGTAGGTATTTCTTA+AGG	0.471637	5_3:+61008978	Msa0822580:intron
ATCGCAAAACCTAGCTCATT+CGG	0.473663	5_3:-61010903	None:intergenic
TTGATGTACTGTTATAAGCT+CGG	0.476925	5_3:+61010782	Msa0822580:three_prime_UTR
CTGAATCACATAAACAGGTT+GGG	0.486125	5_3:-61010579	None:intergenic
CGGCGGTTCTCAATCTGAAT+CGG	0.495473	5_3:+61008605	Msa0822580:five_prime_UTR
AGATTGAGAACCGCCGCCGC+TGG	0.496335	5_3:-61008598	None:intergenic
TGGCATCTCGTCATAGGGTC+AGG	0.497058	5_3:+61010394	Msa0822580:CDS
CCCGGCTAATTTGTGCAAAA+GGG	0.504144	5_3:+61010452	Msa0822580:CDS
AAATAAACAACCTACAAGGC+TGG	0.504987	5_3:-61010959	None:intergenic
TTGCGTTATCAGAGTCGTAC+TGG	0.505845	5_3:+61010300	Msa0822580:CDS
ATAAATCAAGCAACTCCACT+AGG	0.511786	5_3:-61010615	None:intergenic
GGGAATGAACAAAGCTGTGT+TGG	0.521610	5_3:+61010927	Msa0822580:three_prime_UTR
AAGGGCTCTTCCCACCGAAA+AGG	0.526516	5_3:+61008787	Msa0822580:CDS
ACAGCTACAACCAGCGGCGG+CGG	0.529482	5_3:+61008588	Msa0822580:five_prime_UTR
ACCAGTATCAGGTTGTCGGA+AGG	0.534682	5_3:+61008768	Msa0822580:CDS
TTTCACCAGTATCAGGTTGT+CGG	0.537041	5_3:+61008764	Msa0822580:CDS
CGAGATGGCATCTCGTCATA+GGG	0.544710	5_3:+61010389	Msa0822580:CDS
CCATAGTTCTTAATCTTGGT+AGG	0.548600	5_3:-61010270	None:intergenic
TTCCAAAATCAAGTTCCCTC+TGG	0.549470	5_3:+61010497	Msa0822580:CDS
TTTGCACAAATTAGCCGGGA+TGG	0.551631	5_3:-61010448	None:intergenic
CCAGTATCAGGTTGTCGGAA+GGG	0.551758	5_3:+61008769	Msa0822580:CDS
AAGAAGGTTAAGAAAAGCAA+TGG	0.552641	5_3:+61009007	Msa0822580:CDS
TCCTAGTTTGTTATTTACTG+AGG	0.554608	5_3:+61010716	Msa0822580:three_prime_UTR
ACTGAATCACATAAACAGGT+TGG	0.563649	5_3:-61010580	None:intergenic
GTCTTAATGATTTGAATGCA+GGG	0.566014	5_3:-61010420	None:intergenic
CATTAAGACTGCCACCATCC+CGG	0.574553	5_3:+61010434	Msa0822580:CDS
ATGCTCGTACCGAATGAGCT+AGG	0.585439	5_3:+61010894	Msa0822580:three_prime_UTR
AGTGAATCACATTTCCCTAG+TGG	0.598919	5_3:+61010600	Msa0822580:three_prime_UTR
TAAATCAAGCAACTCCACTA+GGG	0.601995	5_3:-61010614	None:intergenic
AGAAGATTAGGCCACCAACT+AGG	0.603627	5_3:+61010526	Msa0822580:CDS
TCCTCAGTAAATAACAAACT+AGG	0.604956	5_3:-61010717	None:intergenic
TGGTTATCACAATATGTACA+AGG	0.613559	5_3:+61010320	Msa0822580:CDS
GTCAAAATAAACAACCTACA+AGG	0.621628	5_3:-61010963	None:intergenic
GCACAAATTAGCCGGGATGG+TGG	0.625128	5_3:-61010445	None:intergenic
GAAGCTTTGGGCAACCAATG+AGG	0.631227	5_3:+61008835	Msa0822580:CDS
CTAATCTTCTTGTACACCAG+AGG	0.631597	5_3:-61010513	None:intergenic
TAATCTTCTTGTACACCAGA+GGG	0.642722	5_3:-61010512	None:intergenic
GGAGACAATGTACAACGAGA+TGG	0.663821	5_3:+61010374	Msa0822580:CDS
CGCCGTTTAGAGTAGTATCA+CGG	0.671590	5_3:-61010347	None:intergenic
TACTACTCTAAACGGCGCTG+TGG	0.679213	5_3:+61010353	Msa0822580:CDS
TAGACAGCTACAACCAGCGG+CGG	0.699423	5_3:+61008585	Msa0822580:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATAATGTTAATTGTTGT+AGG	+	chr5_3:61008966-61008985	Msa0822580:intron	15.0%
!!!	TTTTCAAAGAAGTTTTATTT+TGG	+	chr5_3:61009682-61009701	Msa0822580:intron	15.0%
!!!	TTTCAAAGAAGTTTTATTTT+GGG	+	chr5_3:61009683-61009702	Msa0822580:intron	15.0%
!!	TTAATAATGTTAATTGTTGT+AGG	+	chr5_3:61008966-61008985	Msa0822580:intron	15.0%
!!!	TTTTCAAAGAAGTTTTATTT+TGG	+	chr5_3:61009682-61009701	Msa0822580:intron	15.0%
!!!	TTTCAAAGAAGTTTTATTTT+GGG	+	chr5_3:61009683-61009702	Msa0822580:intron	15.0%
!!	AGTTGTTAAATGAAATTTGA+TGG	+	chr5_3:61009073-61009092	Msa0822580:intron	20.0%
!!	TTAAATGAAATTTGATGGAA+GGG	+	chr5_3:61009078-61009097	Msa0822580:intron	20.0%
!!	AAAAAAGAACAGAAAAACAT+AGG	-	chr5_3:61009710-61009729	None:intergenic	20.0%
!!	GATAAAAATTGAACACAAAA+TGG	-	chr5_3:61009841-61009860	None:intergenic	20.0%
!!	ATAAATGACAAAATATGCAA+TGG	-	chr5_3:61010111-61010130	None:intergenic	20.0%
!!	CATTTATTCTAGTAAAAGTA+AGG	+	chr5_3:61010124-61010143	Msa0822580:intron	20.0%
!!	AGTTGTTAAATGAAATTTGA+TGG	+	chr5_3:61009073-61009092	Msa0822580:intron	20.0%
!!	TTAAATGAAATTTGATGGAA+GGG	+	chr5_3:61009078-61009097	Msa0822580:intron	20.0%
!!	AAAAAAGAACAGAAAAACAT+AGG	-	chr5_3:61009710-61009729	None:intergenic	20.0%
!!	GATAAAAATTGAACACAAAA+TGG	-	chr5_3:61009841-61009860	None:intergenic	20.0%
!!	ATAAATGACAAAATATGCAA+TGG	-	chr5_3:61010111-61010130	None:intergenic	20.0%
!!	CATTTATTCTAGTAAAAGTA+AGG	+	chr5_3:61010124-61010143	Msa0822580:intron	20.0%
!	AAAAAAATATGAAGGAAGGA+AGG	-	chr5_3:61008699-61008718	None:intergenic	25.0%
!	CACAAAAAAAATATGAAGGA+AGG	-	chr5_3:61008703-61008722	None:intergenic	25.0%
!	CACACACAAAAAAAATATGA+AGG	-	chr5_3:61008707-61008726	None:intergenic	25.0%
!	ATTGTTGTAGGTATTTCTTA+AGG	+	chr5_3:61008978-61008997	Msa0822580:intron	25.0%
!	GTTAAATGAAATTTGATGGA+AGG	+	chr5_3:61009077-61009096	Msa0822580:intron	25.0%
!	AGATTTATACTTAGACTGTT+TGG	+	chr5_3:61009114-61009133	Msa0822580:intron	25.0%
!!	CATTAAGTTGTGTAAAAAAC+TGG	+	chr5_3:61009313-61009332	Msa0822580:intron	25.0%
!	CACCTTAACATTAGATTTAA+GGG	-	chr5_3:61009339-61009358	None:intergenic	25.0%
!	TCACCTTAACATTAGATTTA+AGG	-	chr5_3:61009340-61009359	None:intergenic	25.0%
!	AATCTAATGTTAAGGTGAAA+TGG	+	chr5_3:61009342-61009361	Msa0822580:intron	25.0%
!	ATCTAATGTTAAGGTGAAAT+GGG	+	chr5_3:61009343-61009362	Msa0822580:intron	25.0%
!	TTGAAAATATATCCATGCAA+AGG	+	chr5_3:61009390-61009409	Msa0822580:intron	25.0%
!	TGAAAATATATCCATGCAAA+GGG	+	chr5_3:61009391-61009410	Msa0822580:intron	25.0%
!	AAAGATAAGTCAATACAAAC+AGG	-	chr5_3:61009425-61009444	None:intergenic	25.0%
!!!	AGCTTTTATGTTACTTCATA+TGG	-	chr5_3:61009562-61009581	None:intergenic	25.0%
!!	AAACTTCTTTGAAAAAGTGA+CGG	-	chr5_3:61009677-61009696	None:intergenic	25.0%
!!!	GTATTTAACTTTTATAGCAG+CGG	-	chr5_3:61009819-61009838	None:intergenic	25.0%
!!	AAGTAGTTAGTACTTTTGTT+GGG	+	chr5_3:61009861-61009880	Msa0822580:intron	25.0%
!!!	GTTTTGATTTAAGACTGATT+TGG	+	chr5_3:61010010-61010029	Msa0822580:intron	25.0%
!!!	ATTTAAGACTGATTTGGAAA+GGG	+	chr5_3:61010016-61010035	Msa0822580:intron	25.0%
!	TAATAACTAAAGCTAACACA+TGG	-	chr5_3:61010174-61010193	None:intergenic	25.0%
!	AAAGATCTGCAAACAAAAAA+AGG	-	chr5_3:61010241-61010260	None:intergenic	25.0%
!	AATTCCATAGTTCTTAATCT+TGG	-	chr5_3:61010277-61010296	None:intergenic	25.0%
!	AGATTAAGAACTATGGAATT+TGG	+	chr5_3:61010277-61010296	Msa0822580:CDS	25.0%
!	AAAAAAATATGAAGGAAGGA+AGG	-	chr5_3:61008699-61008718	None:intergenic	25.0%
!	CACAAAAAAAATATGAAGGA+AGG	-	chr5_3:61008703-61008722	None:intergenic	25.0%
!	CACACACAAAAAAAATATGA+AGG	-	chr5_3:61008707-61008726	None:intergenic	25.0%
!	ATTGTTGTAGGTATTTCTTA+AGG	+	chr5_3:61008978-61008997	Msa0822580:intron	25.0%
!	GTTAAATGAAATTTGATGGA+AGG	+	chr5_3:61009077-61009096	Msa0822580:intron	25.0%
!	AGATTTATACTTAGACTGTT+TGG	+	chr5_3:61009114-61009133	Msa0822580:intron	25.0%
!!	CATTAAGTTGTGTAAAAAAC+TGG	+	chr5_3:61009313-61009332	Msa0822580:intron	25.0%
!	CACCTTAACATTAGATTTAA+GGG	-	chr5_3:61009339-61009358	None:intergenic	25.0%
!	TCACCTTAACATTAGATTTA+AGG	-	chr5_3:61009340-61009359	None:intergenic	25.0%
!	AATCTAATGTTAAGGTGAAA+TGG	+	chr5_3:61009342-61009361	Msa0822580:intron	25.0%
!	ATCTAATGTTAAGGTGAAAT+GGG	+	chr5_3:61009343-61009362	Msa0822580:intron	25.0%
!	TTGAAAATATATCCATGCAA+AGG	+	chr5_3:61009390-61009409	Msa0822580:intron	25.0%
!	TGAAAATATATCCATGCAAA+GGG	+	chr5_3:61009391-61009410	Msa0822580:intron	25.0%
!	AAAGATAAGTCAATACAAAC+AGG	-	chr5_3:61009425-61009444	None:intergenic	25.0%
!!!	AGCTTTTATGTTACTTCATA+TGG	-	chr5_3:61009562-61009581	None:intergenic	25.0%
!!	AAACTTCTTTGAAAAAGTGA+CGG	-	chr5_3:61009677-61009696	None:intergenic	25.0%
!!!	GTATTTAACTTTTATAGCAG+CGG	-	chr5_3:61009819-61009838	None:intergenic	25.0%
!!	AAGTAGTTAGTACTTTTGTT+GGG	+	chr5_3:61009861-61009880	Msa0822580:intron	25.0%
!!!	GTTTTGATTTAAGACTGATT+TGG	+	chr5_3:61010010-61010029	Msa0822580:intron	25.0%
!!!	ATTTAAGACTGATTTGGAAA+GGG	+	chr5_3:61010016-61010035	Msa0822580:intron	25.0%
!	TAATAACTAAAGCTAACACA+TGG	-	chr5_3:61010174-61010193	None:intergenic	25.0%
!	AAAGATCTGCAAACAAAAAA+AGG	-	chr5_3:61010241-61010260	None:intergenic	25.0%
!	AATTCCATAGTTCTTAATCT+TGG	-	chr5_3:61010277-61010296	None:intergenic	25.0%
!	AGATTAAGAACTATGGAATT+TGG	+	chr5_3:61010277-61010296	Msa0822580:CDS	25.0%
	AAGGAAATGAAAAGGATTAG+TGG	-	chr5_3:61008680-61008699	None:intergenic	30.0%
	AGCTTCATACGATAAATCTT+AGG	-	chr5_3:61008821-61008840	None:intergenic	30.0%
	AGATTTATCGTATGAAGCTT+TGG	+	chr5_3:61008822-61008841	Msa0822580:CDS	30.0%
	GATTTATCGTATGAAGCTTT+GGG	+	chr5_3:61008823-61008842	Msa0822580:CDS	30.0%
	TTTCTTAAGGAAGTTGAAGA+AGG	+	chr5_3:61008991-61009010	Msa0822580:CDS	30.0%
	AAGAAGGTTAAGAAAAGCAA+TGG	+	chr5_3:61009007-61009026	Msa0822580:CDS	30.0%
	TGGGAAAAATGATGTGAAAT+TGG	+	chr5_3:61009362-61009381	Msa0822580:intron	30.0%
	TATTATTGATCAGCTTGTCA+AGG	+	chr5_3:61009488-61009507	Msa0822580:intron	30.0%
	TTCACATGAATCACAGTTTA+GGG	-	chr5_3:61009754-61009773	None:intergenic	30.0%
	TTTCACATGAATCACAGTTT+AGG	-	chr5_3:61009755-61009774	None:intergenic	30.0%
!	CAAGTAGTTAGTACTTTTGT+TGG	+	chr5_3:61009860-61009879	Msa0822580:intron	30.0%
!	AGTAGTTAGTACTTTTGTTG+GGG	+	chr5_3:61009862-61009881	Msa0822580:intron	30.0%
	TTCTGTTTGTGATTATTGCT+GGG	+	chr5_3:61009921-61009940	Msa0822580:intron	30.0%
!!	GATTTAAGACTGATTTGGAA+AGG	+	chr5_3:61010015-61010034	Msa0822580:intron	30.0%
	AAAGTAAGGCTAATTGAACT+TGG	+	chr5_3:61010138-61010157	Msa0822580:intron	30.0%
	TAACTTCAATTGCAGTTTGT+TGG	+	chr5_3:61010197-61010216	Msa0822580:intron	30.0%
	TGGTTATCACAATATGTACA+AGG	+	chr5_3:61010320-61010339	Msa0822580:CDS	30.0%
	GTCTTAATGATTTGAATGCA+GGG	-	chr5_3:61010423-61010442	None:intergenic	30.0%
	AGTCTTAATGATTTGAATGC+AGG	-	chr5_3:61010424-61010443	None:intergenic	30.0%
	ATTCACTGAATCACATAAAC+AGG	-	chr5_3:61010587-61010606	None:intergenic	30.0%
!!	TCCTAGTTTGTTATTTACTG+AGG	+	chr5_3:61010716-61010735	Msa0822580:three_prime_UTR	30.0%
	TCCTCAGTAAATAACAAACT+AGG	-	chr5_3:61010720-61010739	None:intergenic	30.0%
	TTGATGTACTGTTATAAGCT+CGG	+	chr5_3:61010782-61010801	Msa0822580:three_prime_UTR	30.0%
!	GATCACTTTGTTTCAAAGTA+GGG	+	chr5_3:61010818-61010837	Msa0822580:three_prime_UTR	30.0%
	AAGGAAATGAAAAGGATTAG+TGG	-	chr5_3:61008680-61008699	None:intergenic	30.0%
	AGCTTCATACGATAAATCTT+AGG	-	chr5_3:61008821-61008840	None:intergenic	30.0%
	AGATTTATCGTATGAAGCTT+TGG	+	chr5_3:61008822-61008841	Msa0822580:CDS	30.0%
	GATTTATCGTATGAAGCTTT+GGG	+	chr5_3:61008823-61008842	Msa0822580:CDS	30.0%
	TTTCTTAAGGAAGTTGAAGA+AGG	+	chr5_3:61008991-61009010	Msa0822580:CDS	30.0%
	AAGAAGGTTAAGAAAAGCAA+TGG	+	chr5_3:61009007-61009026	Msa0822580:CDS	30.0%
	TGGGAAAAATGATGTGAAAT+TGG	+	chr5_3:61009362-61009381	Msa0822580:intron	30.0%
	TATTATTGATCAGCTTGTCA+AGG	+	chr5_3:61009488-61009507	Msa0822580:intron	30.0%
	TTCACATGAATCACAGTTTA+GGG	-	chr5_3:61009754-61009773	None:intergenic	30.0%
	TTTCACATGAATCACAGTTT+AGG	-	chr5_3:61009755-61009774	None:intergenic	30.0%
!	CAAGTAGTTAGTACTTTTGT+TGG	+	chr5_3:61009860-61009879	Msa0822580:intron	30.0%
!	AGTAGTTAGTACTTTTGTTG+GGG	+	chr5_3:61009862-61009881	Msa0822580:intron	30.0%
	TTCTGTTTGTGATTATTGCT+GGG	+	chr5_3:61009921-61009940	Msa0822580:intron	30.0%
!!	GATTTAAGACTGATTTGGAA+AGG	+	chr5_3:61010015-61010034	Msa0822580:intron	30.0%
	AAAGTAAGGCTAATTGAACT+TGG	+	chr5_3:61010138-61010157	Msa0822580:intron	30.0%
	TAACTTCAATTGCAGTTTGT+TGG	+	chr5_3:61010197-61010216	Msa0822580:intron	30.0%
	TGGTTATCACAATATGTACA+AGG	+	chr5_3:61010320-61010339	Msa0822580:CDS	30.0%
	GTCTTAATGATTTGAATGCA+GGG	-	chr5_3:61010423-61010442	None:intergenic	30.0%
	AGTCTTAATGATTTGAATGC+AGG	-	chr5_3:61010424-61010443	None:intergenic	30.0%
	ATTCACTGAATCACATAAAC+AGG	-	chr5_3:61010587-61010606	None:intergenic	30.0%
!!	TCCTAGTTTGTTATTTACTG+AGG	+	chr5_3:61010716-61010735	Msa0822580:three_prime_UTR	30.0%
	TCCTCAGTAAATAACAAACT+AGG	-	chr5_3:61010720-61010739	None:intergenic	30.0%
	TTGATGTACTGTTATAAGCT+CGG	+	chr5_3:61010782-61010801	Msa0822580:three_prime_UTR	30.0%
!	GATCACTTTGTTTCAAAGTA+GGG	+	chr5_3:61010818-61010837	Msa0822580:three_prime_UTR	30.0%
	AAGGAAGGAAGGAAATGAAA+AGG	-	chr5_3:61008688-61008707	None:intergenic	35.0%
	TGTGTGTGTGAATCTTAACA+CGG	+	chr5_3:61008719-61008738	Msa0822580:intron	35.0%
!	CTTAGGATGTTCATCCTTTT+CGG	-	chr5_3:61008804-61008823	None:intergenic	35.0%
	GACTTACCAGAATTTGGATT+TGG	-	chr5_3:61008867-61008886	None:intergenic	35.0%
	AACAGAGACTTACCAGAATT+TGG	-	chr5_3:61008873-61008892	None:intergenic	35.0%
!	GAAAAGCAATGGACAAGTTT+TGG	+	chr5_3:61009018-61009037	Msa0822580:CDS	35.0%
!!!	ACAAGTTTTGGCTATCAATG+AGG	+	chr5_3:61009030-61009049	Msa0822580:CDS	35.0%
	TATTTGTACTTATCGACCCA+TGG	+	chr5_3:61009156-61009175	Msa0822580:intron	35.0%
	TACCAAAGAAGTGATTCCAT+GGG	-	chr5_3:61009175-61009194	None:intergenic	35.0%
	ATACCAAAGAAGTGATTCCA+TGG	-	chr5_3:61009176-61009195	None:intergenic	35.0%
	GGCCCTTAAATCTAATGTTA+AGG	+	chr5_3:61009334-61009353	Msa0822580:intron	35.0%
!!	TTTGGTGCGGATTTGATTTT+GGG	+	chr5_3:61009640-61009659	Msa0822580:intron	35.0%
!	TTAGTACTTTTGTTGGGGAA+GGG	+	chr5_3:61009867-61009886	Msa0822580:intron	35.0%
	GTTCTGTTTGTGATTATTGC+TGG	+	chr5_3:61009920-61009939	Msa0822580:intron	35.0%
!!!	AACTTGTTTTGAGAAGTCAC+TGG	+	chr5_3:61009966-61009985	Msa0822580:intron	35.0%
	TCAACTATCAAAGTAGTCAC+TGG	-	chr5_3:61010055-61010074	None:intergenic	35.0%
	CCATAGTTCTTAATCTTGGT+AGG	-	chr5_3:61010273-61010292	None:intergenic	35.0%
	CCTACCAAGATTAAGAACTA+TGG	+	chr5_3:61010270-61010289	Msa0822580:CDS	35.0%
	TACCGTGATACTACTCTAAA+CGG	+	chr5_3:61010345-61010364	Msa0822580:CDS	35.0%
	TAATCTTCTTGTACACCAGA+GGG	-	chr5_3:61010515-61010534	None:intergenic	35.0%
!!!	TGGCTTTGTAGGTTGTTTTT+AGG	-	chr5_3:61010554-61010573	None:intergenic	35.0%
	CTGAATCACATAAACAGGTT+GGG	-	chr5_3:61010582-61010601	None:intergenic	35.0%
	ACTGAATCACATAAACAGGT+TGG	-	chr5_3:61010583-61010602	None:intergenic	35.0%
	TAAATCAAGCAACTCCACTA+GGG	-	chr5_3:61010617-61010636	None:intergenic	35.0%
	ATAAATCAAGCAACTCCACT+AGG	-	chr5_3:61010618-61010637	None:intergenic	35.0%
	AGTGGAGTTGCTTGATTTAT+CGG	+	chr5_3:61010618-61010637	Msa0822580:three_prime_UTR	35.0%
!	CGATCACTTTGTTTCAAAGT+AGG	+	chr5_3:61010817-61010836	Msa0822580:three_prime_UTR	35.0%
	TGCACTAATTGCTGCAAAAA+AGG	+	chr5_3:61010862-61010881	Msa0822580:three_prime_UTR	35.0%
	AAATAAACAACCTACAAGGC+TGG	-	chr5_3:61010962-61010981	None:intergenic	35.0%
	AAGGAAGGAAGGAAATGAAA+AGG	-	chr5_3:61008688-61008707	None:intergenic	35.0%
	TGTGTGTGTGAATCTTAACA+CGG	+	chr5_3:61008719-61008738	Msa0822580:intron	35.0%
!	CTTAGGATGTTCATCCTTTT+CGG	-	chr5_3:61008804-61008823	None:intergenic	35.0%
	GACTTACCAGAATTTGGATT+TGG	-	chr5_3:61008867-61008886	None:intergenic	35.0%
	AACAGAGACTTACCAGAATT+TGG	-	chr5_3:61008873-61008892	None:intergenic	35.0%
!	GAAAAGCAATGGACAAGTTT+TGG	+	chr5_3:61009018-61009037	Msa0822580:CDS	35.0%
!!!	ACAAGTTTTGGCTATCAATG+AGG	+	chr5_3:61009030-61009049	Msa0822580:CDS	35.0%
	TATTTGTACTTATCGACCCA+TGG	+	chr5_3:61009156-61009175	Msa0822580:intron	35.0%
	TACCAAAGAAGTGATTCCAT+GGG	-	chr5_3:61009175-61009194	None:intergenic	35.0%
	ATACCAAAGAAGTGATTCCA+TGG	-	chr5_3:61009176-61009195	None:intergenic	35.0%
	GGCCCTTAAATCTAATGTTA+AGG	+	chr5_3:61009334-61009353	Msa0822580:intron	35.0%
!!	TTTGGTGCGGATTTGATTTT+GGG	+	chr5_3:61009640-61009659	Msa0822580:intron	35.0%
!	TTAGTACTTTTGTTGGGGAA+GGG	+	chr5_3:61009867-61009886	Msa0822580:intron	35.0%
	GTTCTGTTTGTGATTATTGC+TGG	+	chr5_3:61009920-61009939	Msa0822580:intron	35.0%
!!!	AACTTGTTTTGAGAAGTCAC+TGG	+	chr5_3:61009966-61009985	Msa0822580:intron	35.0%
	TCAACTATCAAAGTAGTCAC+TGG	-	chr5_3:61010055-61010074	None:intergenic	35.0%
	CCATAGTTCTTAATCTTGGT+AGG	-	chr5_3:61010273-61010292	None:intergenic	35.0%
	CCTACCAAGATTAAGAACTA+TGG	+	chr5_3:61010270-61010289	Msa0822580:CDS	35.0%
	TACCGTGATACTACTCTAAA+CGG	+	chr5_3:61010345-61010364	Msa0822580:CDS	35.0%
	TAATCTTCTTGTACACCAGA+GGG	-	chr5_3:61010515-61010534	None:intergenic	35.0%
!!!	TGGCTTTGTAGGTTGTTTTT+AGG	-	chr5_3:61010554-61010573	None:intergenic	35.0%
	CTGAATCACATAAACAGGTT+GGG	-	chr5_3:61010582-61010601	None:intergenic	35.0%
	ACTGAATCACATAAACAGGT+TGG	-	chr5_3:61010583-61010602	None:intergenic	35.0%
	TAAATCAAGCAACTCCACTA+GGG	-	chr5_3:61010617-61010636	None:intergenic	35.0%
	ATAAATCAAGCAACTCCACT+AGG	-	chr5_3:61010618-61010637	None:intergenic	35.0%
	AGTGGAGTTGCTTGATTTAT+CGG	+	chr5_3:61010618-61010637	Msa0822580:three_prime_UTR	35.0%
!	CGATCACTTTGTTTCAAAGT+AGG	+	chr5_3:61010817-61010836	Msa0822580:three_prime_UTR	35.0%
	TGCACTAATTGCTGCAAAAA+AGG	+	chr5_3:61010862-61010881	Msa0822580:three_prime_UTR	35.0%
	AAATAAACAACCTACAAGGC+TGG	-	chr5_3:61010962-61010981	None:intergenic	35.0%
!	TTTTAGACAGCTACAACCAG+CGG	+	chr5_3:61008582-61008601	Msa0822580:five_prime_UTR	40.0%
!	ATCGGTGTTTGTCGCAAAAA+TGG	+	chr5_3:61008623-61008642	Msa0822580:exon	40.0%
	CGCAAAAATGGTTAACGCTA+AGG	+	chr5_3:61008635-61008654	Msa0822580:exon	40.0%
!	AAAGGATTAGTGGTAGTGCT+TGG	-	chr5_3:61008670-61008689	None:intergenic	40.0%
	GAAACAGTTTCACCAGTATC+AGG	+	chr5_3:61008757-61008776	Msa0822580:intron	40.0%
!	TTTCACCAGTATCAGGTTGT+CGG	+	chr5_3:61008764-61008783	Msa0822580:CDS	40.0%
	TTCGTGCCAAATCCAAATTC+TGG	+	chr5_3:61008858-61008877	Msa0822580:CDS	40.0%
	TCAAATCCGCACCAAACATA+GGG	-	chr5_3:61009636-61009655	None:intergenic	40.0%
	ATCAAATCCGCACCAAACAT+AGG	-	chr5_3:61009637-61009656	None:intergenic	40.0%
!!!	GTTTGGTGCGGATTTGATTT+TGG	+	chr5_3:61009639-61009658	Msa0822580:intron	40.0%
!	GTTAGTACTTTTGTTGGGGA+AGG	+	chr5_3:61009866-61009885	Msa0822580:intron	40.0%
	GAACAAGCTCTACTTGCAAT+CGG	-	chr5_3:61009904-61009923	None:intergenic	40.0%
	AGGCTAATTGAACTTGGAGT+AGG	+	chr5_3:61010144-61010163	Msa0822580:intron	40.0%
!!	TTGCAGTTTGTTGGACATAG+AGG	+	chr5_3:61010206-61010225	Msa0822580:intron	40.0%
!	TCCCTTTTGCACAAATTAGC+CGG	-	chr5_3:61010456-61010475	None:intergenic	40.0%
	TTCCAAAATCAAGTTCCCTC+TGG	+	chr5_3:61010497-61010516	Msa0822580:CDS	40.0%
	CTAATCTTCTTGTACACCAG+AGG	-	chr5_3:61010516-61010535	None:intergenic	40.0%
	CTCTGGTGTACAAGAAGATT+AGG	+	chr5_3:61010514-61010533	Msa0822580:CDS	40.0%
!!!	GTTGTTTTTAGGCTCCTAGT+TGG	-	chr5_3:61010543-61010562	None:intergenic	40.0%
	AGTGAATCACATTTCCCTAG+TGG	+	chr5_3:61010600-61010619	Msa0822580:three_prime_UTR	40.0%
	ATCGCAAAACCTAGCTCATT+CGG	-	chr5_3:61010906-61010925	None:intergenic	40.0%
!	AATGAGCTAGGTTTTGCGAT+AGG	+	chr5_3:61010906-61010925	Msa0822580:three_prime_UTR	40.0%
!	ATGAGCTAGGTTTTGCGATA+GGG	+	chr5_3:61010907-61010926	Msa0822580:three_prime_UTR	40.0%
!	TTTTAGACAGCTACAACCAG+CGG	+	chr5_3:61008582-61008601	Msa0822580:five_prime_UTR	40.0%
!	ATCGGTGTTTGTCGCAAAAA+TGG	+	chr5_3:61008623-61008642	Msa0822580:exon	40.0%
	CGCAAAAATGGTTAACGCTA+AGG	+	chr5_3:61008635-61008654	Msa0822580:exon	40.0%
!	AAAGGATTAGTGGTAGTGCT+TGG	-	chr5_3:61008670-61008689	None:intergenic	40.0%
	GAAACAGTTTCACCAGTATC+AGG	+	chr5_3:61008757-61008776	Msa0822580:intron	40.0%
!	TTTCACCAGTATCAGGTTGT+CGG	+	chr5_3:61008764-61008783	Msa0822580:CDS	40.0%
	TTCGTGCCAAATCCAAATTC+TGG	+	chr5_3:61008858-61008877	Msa0822580:CDS	40.0%
	TCAAATCCGCACCAAACATA+GGG	-	chr5_3:61009636-61009655	None:intergenic	40.0%
	ATCAAATCCGCACCAAACAT+AGG	-	chr5_3:61009637-61009656	None:intergenic	40.0%
!!!	GTTTGGTGCGGATTTGATTT+TGG	+	chr5_3:61009639-61009658	Msa0822580:intron	40.0%
!	GTTAGTACTTTTGTTGGGGA+AGG	+	chr5_3:61009866-61009885	Msa0822580:intron	40.0%
	GAACAAGCTCTACTTGCAAT+CGG	-	chr5_3:61009904-61009923	None:intergenic	40.0%
	AGGCTAATTGAACTTGGAGT+AGG	+	chr5_3:61010144-61010163	Msa0822580:intron	40.0%
!!	TTGCAGTTTGTTGGACATAG+AGG	+	chr5_3:61010206-61010225	Msa0822580:intron	40.0%
!	TCCCTTTTGCACAAATTAGC+CGG	-	chr5_3:61010456-61010475	None:intergenic	40.0%
	TTCCAAAATCAAGTTCCCTC+TGG	+	chr5_3:61010497-61010516	Msa0822580:CDS	40.0%
	CTAATCTTCTTGTACACCAG+AGG	-	chr5_3:61010516-61010535	None:intergenic	40.0%
	CTCTGGTGTACAAGAAGATT+AGG	+	chr5_3:61010514-61010533	Msa0822580:CDS	40.0%
!!!	GTTGTTTTTAGGCTCCTAGT+TGG	-	chr5_3:61010543-61010562	None:intergenic	40.0%
	AGTGAATCACATTTCCCTAG+TGG	+	chr5_3:61010600-61010619	Msa0822580:three_prime_UTR	40.0%
	ATCGCAAAACCTAGCTCATT+CGG	-	chr5_3:61010906-61010925	None:intergenic	40.0%
!	AATGAGCTAGGTTTTGCGAT+AGG	+	chr5_3:61010906-61010925	Msa0822580:three_prime_UTR	40.0%
!	ATGAGCTAGGTTTTGCGATA+GGG	+	chr5_3:61010907-61010926	Msa0822580:three_prime_UTR	40.0%
	GCTGGTTGTAGCTGTCTAAA+AGG	-	chr5_3:61008583-61008602	None:intergenic	45.0%
!	GGATGTTCATCCTTTTCGGT+GGG	-	chr5_3:61008800-61008819	None:intergenic	45.0%
!	AGGATGTTCATCCTTTTCGG+TGG	-	chr5_3:61008801-61008820	None:intergenic	45.0%
	GACCCATGGAATCACTTCTT+TGG	+	chr5_3:61009170-61009189	Msa0822580:intron	45.0%
	TATCCATGCAAAGGGAGACT+TGG	+	chr5_3:61009399-61009418	Msa0822580:intron	45.0%
	AACATAGGGCGCGAATGAAT+TGG	-	chr5_3:61009622-61009641	None:intergenic	45.0%
	ATTCATTCGCGCCCTATGTT+TGG	+	chr5_3:61009622-61009641	Msa0822580:intron	45.0%
!	TACTTTTGTTGGGGAAGGGA+AGG	+	chr5_3:61009871-61009890	Msa0822580:intron	45.0%
	TTGCGTTATCAGAGTCGTAC+TGG	+	chr5_3:61010300-61010319	Msa0822580:CDS	45.0%
!	CGCCGTTTAGAGTAGTATCA+CGG	-	chr5_3:61010350-61010369	None:intergenic	45.0%
	GGAGACAATGTACAACGAGA+TGG	+	chr5_3:61010374-61010393	Msa0822580:CDS	45.0%
	TTTGCACAAATTAGCCGGGA+TGG	-	chr5_3:61010451-61010470	None:intergenic	45.0%
!	TCCCGGCTAATTTGTGCAAA+AGG	+	chr5_3:61010451-61010470	Msa0822580:CDS	45.0%
!	CCCTTTTGCACAAATTAGCC+GGG	-	chr5_3:61010455-61010474	None:intergenic	45.0%
!	CCCGGCTAATTTGTGCAAAA+GGG	+	chr5_3:61010452-61010471	Msa0822580:CDS	45.0%
!	CACCAGAGGGAACTTGATTT+TGG	-	chr5_3:61010502-61010521	None:intergenic	45.0%
	AGAAGATTAGGCCACCAACT+AGG	+	chr5_3:61010526-61010545	Msa0822580:CDS	45.0%
!!	GTTTTTAGGCTCCTAGTTGG+TGG	-	chr5_3:61010540-61010559	None:intergenic	45.0%
!	CATAAACAGGTTGGGCTTCT+TGG	-	chr5_3:61010574-61010593	None:intergenic	45.0%
	GGGAATGAACAAAGCTGTGT+TGG	+	chr5_3:61010927-61010946	Msa0822580:three_prime_UTR	45.0%
!	GTAATTGTGTCCAGCCTTGT+AGG	+	chr5_3:61010949-61010968	Msa0822580:three_prime_UTR	45.0%
	GCTGGTTGTAGCTGTCTAAA+AGG	-	chr5_3:61008583-61008602	None:intergenic	45.0%
!	GGATGTTCATCCTTTTCGGT+GGG	-	chr5_3:61008800-61008819	None:intergenic	45.0%
!	AGGATGTTCATCCTTTTCGG+TGG	-	chr5_3:61008801-61008820	None:intergenic	45.0%
	GACCCATGGAATCACTTCTT+TGG	+	chr5_3:61009170-61009189	Msa0822580:intron	45.0%
	TATCCATGCAAAGGGAGACT+TGG	+	chr5_3:61009399-61009418	Msa0822580:intron	45.0%
	AACATAGGGCGCGAATGAAT+TGG	-	chr5_3:61009622-61009641	None:intergenic	45.0%
	ATTCATTCGCGCCCTATGTT+TGG	+	chr5_3:61009622-61009641	Msa0822580:intron	45.0%
!	TACTTTTGTTGGGGAAGGGA+AGG	+	chr5_3:61009871-61009890	Msa0822580:intron	45.0%
	TTGCGTTATCAGAGTCGTAC+TGG	+	chr5_3:61010300-61010319	Msa0822580:CDS	45.0%
!	CGCCGTTTAGAGTAGTATCA+CGG	-	chr5_3:61010350-61010369	None:intergenic	45.0%
	GGAGACAATGTACAACGAGA+TGG	+	chr5_3:61010374-61010393	Msa0822580:CDS	45.0%
	TTTGCACAAATTAGCCGGGA+TGG	-	chr5_3:61010451-61010470	None:intergenic	45.0%
!	TCCCGGCTAATTTGTGCAAA+AGG	+	chr5_3:61010451-61010470	Msa0822580:CDS	45.0%
!	CCCTTTTGCACAAATTAGCC+GGG	-	chr5_3:61010455-61010474	None:intergenic	45.0%
!	CCCGGCTAATTTGTGCAAAA+GGG	+	chr5_3:61010452-61010471	Msa0822580:CDS	45.0%
!	CACCAGAGGGAACTTGATTT+TGG	-	chr5_3:61010502-61010521	None:intergenic	45.0%
	AGAAGATTAGGCCACCAACT+AGG	+	chr5_3:61010526-61010545	Msa0822580:CDS	45.0%
!!	GTTTTTAGGCTCCTAGTTGG+TGG	-	chr5_3:61010540-61010559	None:intergenic	45.0%
!	CATAAACAGGTTGGGCTTCT+TGG	-	chr5_3:61010574-61010593	None:intergenic	45.0%
	GGGAATGAACAAAGCTGTGT+TGG	+	chr5_3:61010927-61010946	Msa0822580:three_prime_UTR	45.0%
!	GTAATTGTGTCCAGCCTTGT+AGG	+	chr5_3:61010949-61010968	Msa0822580:three_prime_UTR	45.0%
	CGGCGGTTCTCAATCTGAAT+CGG	+	chr5_3:61008605-61008624	Msa0822580:five_prime_UTR	50.0%
!	ACCAGTATCAGGTTGTCGGA+AGG	+	chr5_3:61008768-61008787	Msa0822580:CDS	50.0%
!	CCAGTATCAGGTTGTCGGAA+GGG	+	chr5_3:61008769-61008788	Msa0822580:CDS	50.0%
!!	GAAGCTTTGGGCAACCAATG+AGG	+	chr5_3:61008835-61008854	Msa0822580:CDS	50.0%
	GGATTTGGCACGAACCTCAT+TGG	-	chr5_3:61008852-61008871	None:intergenic	50.0%
	CAAGCTCTACTTGCAATCGG+AGG	-	chr5_3:61009901-61009920	None:intergenic	50.0%
	TACTACTCTAAACGGCGCTG+TGG	+	chr5_3:61010353-61010372	Msa0822580:CDS	50.0%
	ACGAGATGGCATCTCGTCAT+AGG	+	chr5_3:61010388-61010407	Msa0822580:CDS	50.0%
	CGAGATGGCATCTCGTCATA+GGG	+	chr5_3:61010389-61010408	Msa0822580:CDS	50.0%
	CATTAAGACTGCCACCATCC+CGG	+	chr5_3:61010434-61010453	Msa0822580:CDS	50.0%
!!	GTTGGGCTTCTTGGCTTTGT+AGG	-	chr5_3:61010565-61010584	None:intergenic	50.0%
	ATGCTCGTACCGAATGAGCT+AGG	+	chr5_3:61010894-61010913	Msa0822580:three_prime_UTR	50.0%
	CGGCGGTTCTCAATCTGAAT+CGG	+	chr5_3:61008605-61008624	Msa0822580:five_prime_UTR	50.0%
!	ACCAGTATCAGGTTGTCGGA+AGG	+	chr5_3:61008768-61008787	Msa0822580:CDS	50.0%
!	CCAGTATCAGGTTGTCGGAA+GGG	+	chr5_3:61008769-61008788	Msa0822580:CDS	50.0%
!!	GAAGCTTTGGGCAACCAATG+AGG	+	chr5_3:61008835-61008854	Msa0822580:CDS	50.0%
	GGATTTGGCACGAACCTCAT+TGG	-	chr5_3:61008852-61008871	None:intergenic	50.0%
	CAAGCTCTACTTGCAATCGG+AGG	-	chr5_3:61009901-61009920	None:intergenic	50.0%
	TACTACTCTAAACGGCGCTG+TGG	+	chr5_3:61010353-61010372	Msa0822580:CDS	50.0%
	ACGAGATGGCATCTCGTCAT+AGG	+	chr5_3:61010388-61010407	Msa0822580:CDS	50.0%
	CGAGATGGCATCTCGTCATA+GGG	+	chr5_3:61010389-61010408	Msa0822580:CDS	50.0%
	CATTAAGACTGCCACCATCC+CGG	+	chr5_3:61010434-61010453	Msa0822580:CDS	50.0%
!!	GTTGGGCTTCTTGGCTTTGT+AGG	-	chr5_3:61010565-61010584	None:intergenic	50.0%
	ATGCTCGTACCGAATGAGCT+AGG	+	chr5_3:61010894-61010913	Msa0822580:three_prime_UTR	50.0%
	TAGACAGCTACAACCAGCGG+CGG	+	chr5_3:61008585-61008604	Msa0822580:five_prime_UTR	55.0%
	CCCTTCCGACAACCTGATAC+TGG	-	chr5_3:61008772-61008791	None:intergenic	55.0%
	AAGGGCTCTTCCCACCGAAA+AGG	+	chr5_3:61008787-61008806	Msa0822580:CDS	55.0%
	AGGCCAAGTCTCCCTTTGCA+TGG	-	chr5_3:61009405-61009424	None:intergenic	55.0%
!	TTCGCGCCCTATGTTTGGTG+CGG	+	chr5_3:61009627-61009646	Msa0822580:intron	55.0%
	TGGCATCTCGTCATAGGGTC+AGG	+	chr5_3:61010394-61010413	Msa0822580:CDS	55.0%
	GCACAAATTAGCCGGGATGG+TGG	-	chr5_3:61010448-61010467	None:intergenic	55.0%
	GCTCATTCGGTACGAGCATC+TGG	-	chr5_3:61010893-61010912	None:intergenic	55.0%
	TAGACAGCTACAACCAGCGG+CGG	+	chr5_3:61008585-61008604	Msa0822580:five_prime_UTR	55.0%
	CCCTTCCGACAACCTGATAC+TGG	-	chr5_3:61008772-61008791	None:intergenic	55.0%
	AAGGGCTCTTCCCACCGAAA+AGG	+	chr5_3:61008787-61008806	Msa0822580:CDS	55.0%
	AGGCCAAGTCTCCCTTTGCA+TGG	-	chr5_3:61009405-61009424	None:intergenic	55.0%
!	TTCGCGCCCTATGTTTGGTG+CGG	+	chr5_3:61009627-61009646	Msa0822580:intron	55.0%
	TGGCATCTCGTCATAGGGTC+AGG	+	chr5_3:61010394-61010413	Msa0822580:CDS	55.0%
	GCACAAATTAGCCGGGATGG+TGG	-	chr5_3:61010448-61010467	None:intergenic	55.0%
	GCTCATTCGGTACGAGCATC+TGG	-	chr5_3:61010893-61010912	None:intergenic	55.0%
	ACAGCTACAACCAGCGGCGG+CGG	+	chr5_3:61008588-61008607	Msa0822580:five_prime_UTR	65.0%
	AGATTGAGAACCGCCGCCGC+TGG	-	chr5_3:61008601-61008620	None:intergenic	65.0%
	ACAGCTACAACCAGCGGCGG+CGG	+	chr5_3:61008588-61008607	Msa0822580:five_prime_UTR	65.0%
	AGATTGAGAACCGCCGCCGC+TGG	-	chr5_3:61008601-61008620	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	61008579	61010983	61008579	ID=Msa0822580;Name=Msa0822580
chr5_3	mRNA	61008579	61010983	61008579	ID=Msa0822580-mRNA-1;Parent=Msa0822580;Name=Msa0822580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=63\|1\|1\|1\|1\|1\|4\|387\|178
chr5_3	exon	61008579	61008656	61008579	ID=Msa0822580-mRNA-1:exon:18761;Parent=Msa0822580-mRNA-1
chr5_3	exon	61008764	61008879	61008764	ID=Msa0822580-mRNA-1:exon:18762;Parent=Msa0822580-mRNA-1
chr5_3	exon	61008988	61009051	61008988	ID=Msa0822580-mRNA-1:exon:18763;Parent=Msa0822580-mRNA-1
chr5_3	exon	61010255	61010983	61010255	ID=Msa0822580-mRNA-1:exon:18764;Parent=Msa0822580-mRNA-1
chr5_3	five_prime_UTR	61008579	61008641	61008579	ID=Msa0822580-mRNA-1:five_prime_utr;Parent=Msa0822580-mRNA-1
chr5_3	CDS	61008642	61008656	61008642	ID=Msa0822580-mRNA-1:cds;Parent=Msa0822580-mRNA-1
chr5_3	CDS	61008764	61008879	61008764	ID=Msa0822580-mRNA-1:cds;Parent=Msa0822580-mRNA-1
chr5_3	CDS	61008988	61009051	61008988	ID=Msa0822580-mRNA-1:cds;Parent=Msa0822580-mRNA-1
chr5_3	CDS	61010255	61010596	61010255	ID=Msa0822580-mRNA-1:cds;Parent=Msa0822580-mRNA-1
chr5_3	three_prime_UTR	61010597	61010983	61010597	ID=Msa0822580-mRNA-1:three_prime_utr;Parent=Msa0822580-mRNA-1

Gene Sequence

>Msa0822580

ATGGTTAACGCTAAGTTTCACCAGTATCAGGTTGTCGGAAGGGCTCTTCCCACCGAAAAGGATGAACATCCTAAGATTTATCGTATGAAGCTTTGGGCAACCAATGAGGTTCGTGCCAAATCCAAATTCTGGTATTTCTTAAGGAAGTTGAAGAAGGTTAAGAAAAGCAATGGACAAGTTTTGGCTATCAATGAGATCTTTGAGAAAAATCCTACCAAGATTAAGAACTATGGAATTTGGTTGCGTTATCAGAGTCGTACTGGTTATCACAATATGTACAAGGAATACCGTGATACTACTCTAAACGGCGCTGTGGAGACAATGTACAACGAGATGGCATCTCGTCATAGGGTCAGGTTTCCCTGCATTCAAATCATTAAGACTGCCACCATCCCGGCTAATTTGTGCAAAAGGGAGAGCACTAAGCAGTTTCACAATTCCAAAATCAAGTTCCCTCTGGTGTACAAGAAGATTAGGCCACCAACTAGGAGCCTAAAAACAACCTACAAAGCCAAGAAGCCCAACCTGTTTATGTGA

Protein sequence

>Msa0822580

MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRFPCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM*