AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0139300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139300 MtrunA17_Chr4g0039611 95.541 1099 21 4 1 1093 1 1077 0.0 2149
Msa0139300 MtrunA17_Chr5g0395621 88.000 1100 103 5 1 1093 1 1078 0.0 1972
Msa0139300 MtrunA17_Chr8g0340191 81.395 258 48 0 576 833 1 258 3.15e-147 440
Msa0139300 MtrunA17_Chr8g0340201 69.524 210 53 1 839 1048 2 200 2.74e-92 293
Msa0139300 MtrunA17_Chr8g0340181 50.323 310 105 7 247 550 1 267 8.61e-77 254
Msa0139300 MtrunA17_Chr8g0340171 60.294 204 47 1 1 204 1 170 1.51e-71 236
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0139300 AT5G17020.1 82.712 1099 160 4 1 1093 1 1075 0.0 1871
Msa0139300 AT5G17020.2 82.891 1093 154 3 1 1093 1 1060 0.0 1866
Msa0139300 AT3G03110.1 79.254 1099 199 4 1 1093 1 1076 0.0 1783

Find 263 sgRNAs with CRISPR-Local

Find 754 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAGTCCATTAACAAAT+TGG 0.194943 1_3:-72950946 None:intergenic
TGAAAACATGAATATATATT+AGG 0.200961 1_3:+72952077 Msa0139300:three_prime_UTR
ACAAGTGTTGCATCTTCTTT+AGG 0.217241 1_3:+72948781 Msa0139300:CDS
TGATGTTCTTGTTCAATATA+AGG 0.232496 1_3:+72944898 Msa0139300:CDS
CTCATAGTTGAAGATGAAAA+TGG 0.234394 1_3:+72944845 Msa0139300:CDS
GAATATAACAACTTTGCTTT+TGG 0.253627 1_3:+72943841 Msa0139300:CDS
TGTTTACTATTGTAGCAAAA+AGG 0.257518 1_3:-72949311 None:intergenic
CAGGTGGCATCCCTTCAATT+TGG 0.261199 1_3:+72943200 Msa0139300:intron
AAAATAATATCCTCTCTATT+TGG 0.262760 1_3:-72951996 None:intergenic
GTATCAGGAAATCTCGTATA+TGG 0.269276 1_3:-72951000 None:intergenic
TAAATTGATCGAGACATTCT+TGG 0.269912 1_3:+72949173 Msa0139300:CDS
AGCAAGCAAAAGACCTGATT+TGG 0.273590 1_3:-72948059 None:intergenic
TATTCTCTTGAGTGGATTCC+AGG 0.283589 1_3:-72943823 None:intergenic
CAGGTTACCCAATTTGTTAA+TGG 0.289036 1_3:+72950938 Msa0139300:intron
GAAGAAAAGGAAAACGTAAT+TGG 0.300431 1_3:-72939379 None:intergenic
CAAAGAATGCTTTCTATTCC+AGG 0.320623 1_3:+72951422 Msa0139300:CDS
CGGAGTGATGATGACTCTTT+AGG 0.322684 1_3:+72951818 Msa0139300:three_prime_UTR
CATCTCCGACATCATTGTTC+AGG 0.324705 1_3:+72941221 Msa0139300:CDS
TACCGAGAGCACTTACTATA+TGG 0.330512 1_3:+72951932 Msa0139300:three_prime_UTR
CAAGTGTTGCATCTTCTTTA+GGG 0.333806 1_3:+72948782 Msa0139300:CDS
TCGGGGAGAGAGAAGAGTTC+GGG 0.340174 1_3:-72939550 None:intergenic
CACGTATCAGCTCAGCCCTT+TGG 0.340622 1_3:-72942887 None:intergenic
CAGGTATCGGCAATGCTTCC+TGG 0.341710 1_3:+72944710 Msa0139300:intron
GGAGATGCTGAAGAAGTTTC+AGG 0.344422 1_3:+72950267 Msa0139300:CDS
TGCGAACTTGATGGGACTTC+AGG 0.345750 1_3:+72944079 Msa0139300:CDS
AATAGGTCTGTTTGGACTAC+TGG 0.348346 1_3:+72943997 Msa0139300:intron
AGGTGGCATCCCTTCAATTT+GGG 0.357467 1_3:+72943201 Msa0139300:intron
GTTTGAGCCACATCGAAGTT+TGG 0.357770 1_3:+72944040 Msa0139300:CDS
TTGAAAATAATAGGTCTGTT+TGG 0.359269 1_3:+72943989 Msa0139300:intron
AATACACTCTGCTGGGCAAT+TGG 0.360947 1_3:+72945568 Msa0139300:CDS
ACGTATCAGCTCAGCCCTTT+GGG 0.361354 1_3:-72942886 None:intergenic
CATTGCATGCCTTCTTATCA+TGG 0.362756 1_3:+72942922 Msa0139300:CDS
GTGTGCTAACTGAGCCCCTT+TGG 0.363467 1_3:+72950740 Msa0139300:CDS
TTGACCTTTCAGCTGGAAAC+TGG 0.366423 1_3:+72950718 Msa0139300:intron
TAGCTGGTCTGAGTGCTAAT+TGG 0.367437 1_3:-72952103 None:intergenic
GACTGTGCTTAATATATTGC+AGG 0.367551 1_3:+72948264 Msa0139300:CDS
GAAAACATGAATATATATTA+GGG 0.369931 1_3:+72952078 Msa0139300:three_prime_UTR
TCAGCAATTGAAGCTTGTTA+TGG 0.371534 1_3:+72950177 Msa0139300:CDS
ATTCAATCATGTGGGCATTT+CGG 0.372536 1_3:+72950200 Msa0139300:CDS
TATATTCATGGGCCAATTGC+AGG 0.373962 1_3:+72943259 Msa0139300:CDS
CAGAAATGGATGGAAATTAT+AGG 0.375812 1_3:+72948193 Msa0139300:intron
AGATTTCGATATGCTGGAAC+TGG 0.377398 1_3:-72943085 None:intergenic
TTCGATGCAGTTCGGTTAAG+AGG 0.380505 1_3:+72949142 Msa0139300:intron
ACCAATGATGGATCCTGTTC+TGG 0.380819 1_3:+72949239 Msa0139300:CDS
ACCTCAGCTGTTGTCATGTT+CGG 0.382138 1_3:-72950847 None:intergenic
GATTATTGATTTACTAATTG+AGG 0.382141 1_3:+72951727 Msa0139300:three_prime_UTR
TTCTTATCATGGATCCCCTT+GGG 0.383666 1_3:+72942933 Msa0139300:CDS
GCTCAACATTATATTAGTTC+AGG 0.386914 1_3:+72941411 Msa0139300:CDS
ATAAAGCTTCGCCATCTTGC+TGG 0.392745 1_3:-72941593 None:intergenic
GAGGGAGACTCTTATTTACT+TGG 0.392816 1_3:+72945095 Msa0139300:CDS
TCAACTATGAGAACCTCTTC+GGG 0.394916 1_3:-72944833 None:intergenic
GAAAGGAATATTGCTGAAAC+AGG 0.395957 1_3:+72950229 Msa0139300:CDS
AAGGCGTAATTAAATATAGA+TGG 0.397062 1_3:+72941157 Msa0139300:CDS
CTAGAGATTTGAAGCTAGAA+AGG 0.397708 1_3:-72952035 None:intergenic
ACAATTTGTGCCACCAATGA+TGG 0.397908 1_3:+72949227 Msa0139300:CDS
CAAGATGTATGGTATATTCA+TGG 0.397963 1_3:+72943247 Msa0139300:CDS
AAGAACATCATTGTCCTTCA+AGG 0.398870 1_3:-72944885 None:intergenic
ATGACTTGAAGCCACATATC+AGG 0.399612 1_3:-72940136 None:intergenic
CAGTACCTGCTCTTCTATCA+TGG 0.400683 1_3:-72945605 None:intergenic
TTCAACTATGAGAACCTCTT+CGG 0.400992 1_3:-72944834 None:intergenic
TTTGTATCTGAACTTCTATC+AGG 0.404322 1_3:+72947796 Msa0139300:CDS
TGCACAAACCGCCAGAAGTT+AGG 0.404664 1_3:-72951846 None:intergenic
AAGAACTTAAGCCGGTGCTC+AGG 0.405513 1_3:-72949959 None:intergenic
TGTGCTAACTGAGCCCCTTT+GGG 0.407002 1_3:+72950741 Msa0139300:CDS
TGTTTACTTGACAGATTATG+AGG 0.407197 1_3:+72945076 Msa0139300:intron
ATGCTTCCTGGTATGGTTGA+TGG 0.407442 1_3:+72944722 Msa0139300:CDS
TGGGCAATTGGATCTATATC+TGG 0.409569 1_3:+72945580 Msa0139300:CDS
TGAGACACATCCTGGAGTTC+AGG 0.412850 1_3:+72946613 Msa0139300:CDS
ATCTCGCTGCTCGGCAGGTA+AGG 0.415514 1_3:-72941184 None:intergenic
TCCTCTCTATTTGGAGGGAT+GGG 0.418180 1_3:-72951987 None:intergenic
CTTCTTATCATGGATCCCCT+TGG 0.418863 1_3:+72942932 Msa0139300:CDS
TGCAGCTTCTGCGAACTTGA+TGG 0.419691 1_3:+72944070 Msa0139300:CDS
CTTAGATCCAGTGCCGTAGA+AGG 0.421045 1_3:-72939747 None:intergenic
GATCCAAACACACCTGCAAT+TGG 0.423360 1_3:-72943271 None:intergenic
TTAGCCGCTGCGACAAGATC+AGG 0.425401 1_3:-72941617 None:intergenic
TGAAGGATCAAGATGTAATA+CGG 0.426213 1_3:+72948242 Msa0139300:CDS
TGAGTGAGTTTGAAAGAAGA+GGG 0.429009 1_3:-72939427 None:intergenic
TTCGGGGAGAGAGAAGAGTT+CGG 0.431570 1_3:-72939551 None:intergenic
TTGCCATGTGCATATGCCTC+GGG 0.433269 1_3:-72943420 None:intergenic
GAGTGTATTCAAATTGTTCC+AGG 0.433903 1_3:-72945554 None:intergenic
ACTGATCTGTTTGTCAAGCC+AGG 0.438397 1_3:+72950021 Msa0139300:CDS
TGAATTTCTTCAGCGGTTGA+TGG 0.438441 1_3:+72948031 Msa0139300:CDS
ATTCACTCTACTCTCGCTCT+AGG 0.440316 1_3:+72939629 Msa0139300:five_prime_UTR
TTTAGGTGTGACCTAACTTC+TGG 0.441541 1_3:+72951835 Msa0139300:three_prime_UTR
TCTTTCACTCAGGTTCTTGA+AGG 0.445088 1_3:+72941138 Msa0139300:intron
GTTGATGGAGCTCCCAAATC+AGG 0.445324 1_3:+72948046 Msa0139300:CDS
AAATAGTCCATTAACAAATT+GGG 0.445619 1_3:-72950945 None:intergenic
TCAAGATCTGCAATAGTGAT+TGG 0.450448 1_3:-72947823 None:intergenic
AGCTTAAACAATCATTGAAC+AGG 0.451004 1_3:+72941815 Msa0139300:CDS
TACTAATTGAGGATTATGTT+GGG 0.451908 1_3:+72951738 Msa0139300:three_prime_UTR
ATCCTCTCTATTTGGAGGGA+TGG 0.452697 1_3:-72951988 None:intergenic
ATCGGCAATGCTTCCTGGTA+TGG 0.453160 1_3:+72944715 Msa0139300:CDS
AGATGAAATGGTGGACTCAT+AGG 0.454147 1_3:+72951469 Msa0139300:CDS
GATCGAGACATTCTTGGATA+AGG 0.455063 1_3:+72949179 Msa0139300:CDS
GCATCTCCAACAACAGGTTC+AGG 0.456467 1_3:-72950252 None:intergenic
TGTGAACCTGCATTAATAGA+AGG 0.457382 1_3:-72943793 None:intergenic
ACAATTTGAATACACTCTGC+TGG 0.457803 1_3:+72945560 Msa0139300:CDS
CTAGCATAATCTCCCAGAAC+AGG 0.458405 1_3:-72949252 None:intergenic
ACCTCAGATTCCCTTGCATC+AGG 0.459982 1_3:-72949282 None:intergenic
TTTCATCTTGCAACTCGATA+GGG 0.460559 1_3:-72951454 None:intergenic
AATCTCCTCCGAGCGAGTCT+AGG 0.461260 1_3:+72939590 Msa0139300:five_prime_UTR
TGCTTCCTGGTATGGTTGAT+GGG 0.462235 1_3:+72944723 Msa0139300:CDS
TCTTCAGCATCTCCAACAAC+AGG 0.463831 1_3:-72950258 None:intergenic
TCGATAGGGGCAATCAGCCC+TGG 0.464759 1_3:-72951440 None:intergenic
TATCGAGTTGCAAGATGAAA+TGG 0.464848 1_3:+72951457 Msa0139300:CDS
ATTCCATCTCGCTGCTCGGC+AGG 0.465981 1_3:-72941189 None:intergenic
TTACTAATTGAGGATTATGT+TGG 0.467235 1_3:+72951737 Msa0139300:three_prime_UTR
GCCACCGTCGCCGCCTTCTA+CGG 0.469747 1_3:+72939734 Msa0139300:CDS
TTTATGCATGAGACACATCC+TGG 0.470454 1_3:+72946605 Msa0139300:CDS
AACAGGCCTGAACCTGTTGT+TGG 0.470757 1_3:+72950246 Msa0139300:CDS
CCAATGATGGATCCTGTTCT+GGG 0.470966 1_3:+72949240 Msa0139300:CDS
TCACTCTTCTTCTTCTCCGA+TGG 0.473964 1_3:+72939658 Msa0139300:exon
CCCAGAACAGGATCCATCAT+TGG 0.482264 1_3:-72949240 None:intergenic
CAACCTTTCCGTTCGAAATG+AGG 0.482971 1_3:-72941377 None:intergenic
GCTGAAGATCAACCACAGAT+TGG 0.484039 1_3:+72949201 Msa0139300:CDS
ATCTCCTCCGAGCGAGTCTA+GGG 0.484275 1_3:+72939591 Msa0139300:five_prime_UTR
ATTTCATCTTGCAACTCGAT+AGG 0.485254 1_3:-72951455 None:intergenic
GACGCTACTAAGCTATATAT+AGG 0.486822 1_3:-72939342 None:intergenic
GCAAGCAAAAGACCTGATTT+GGG 0.487434 1_3:-72948058 None:intergenic
TATTGTGTTAGGCGGCAGTA+TGG 0.488558 1_3:-72943395 None:intergenic
CATTGTCCTTCAAGGTTTCA+CGG 0.489746 1_3:-72944877 None:intergenic
GCAGGTTCACATCCGCATCC+TGG 0.490283 1_3:+72943805 Msa0139300:CDS
TTTGGACTACTGGAATTCCT+TGG 0.490547 1_3:+72944007 Msa0139300:CDS
TGATAGCCTTCTATTAATGC+AGG 0.490921 1_3:+72943787 Msa0139300:intron
ATTTACATATCAACAATAGC+TGG 0.491788 1_3:-72952119 None:intergenic
AAGGCATACAGATTCGTAGA+AGG 0.492583 1_3:-72947863 None:intergenic
ATAATATCCTCTCTATTTGG+AGG 0.496349 1_3:-72951993 None:intergenic
AGTTCTGTAATCAGTTCTAC+AGG 0.497293 1_3:+72950514 Msa0139300:CDS
GCAGCTTCTGCGAACTTGAT+GGG 0.497457 1_3:+72944071 Msa0139300:CDS
TGGGTTCAAATTACATGTCC+TGG 0.499157 1_3:+72950599 Msa0139300:CDS
AGCGTAAGATTTCGATATGC+TGG 0.500147 1_3:-72943091 None:intergenic
TTCACTCTACTCTCGCTCTA+GGG 0.501547 1_3:+72939630 Msa0139300:five_prime_UTR
CATCTTATGTGAAACTTCTA+CGG 0.502876 1_3:+72949049 Msa0139300:CDS
TCGCTTGATAGGTATGTTGT+TGG 0.504977 1_3:+72946515 Msa0139300:intron
TCATAGTTGAAGATGAAAAT+GGG 0.505293 1_3:+72944846 Msa0139300:CDS
AGAATAATAGGTATTTATAG+AGG 0.505983 1_3:-72939494 None:intergenic
TATCAGGAAATCTCGTATAT+GGG 0.506963 1_3:-72950999 None:intergenic
AACAACTCAGTGGTGAGGAT+TGG 0.507258 1_3:+72945530 Msa0139300:CDS
AAATGCTGATAAGATATTCA+AGG 0.507542 1_3:-72943865 None:intergenic
CAACGTCGTCAGCTTTATGC+TGG 0.507554 1_3:+72944764 Msa0139300:CDS
GTGAGTGAGTTTGAAAGAAG+AGG 0.508087 1_3:-72939428 None:intergenic
TGCCTCGGGGATATTGTGTT+AGG 0.509775 1_3:-72943406 None:intergenic
AGATCATTGTGATTTGAGGC+AGG 0.510406 1_3:-72948813 None:intergenic
AGTTGTTATATTCTCTTGAG+TGG 0.513869 1_3:-72943831 None:intergenic
CCTGGTATGGTTGATGGGCA+CGG 0.514902 1_3:+72944728 Msa0139300:CDS
CCATGATGATACTGAAAAGC+AGG 0.516021 1_3:+72945128 Msa0139300:CDS
TGGACATGTTGAATGTGTAC+AGG 0.517694 1_3:+72948839 Msa0139300:CDS
GTCGCCGCCTTCTACGGCAC+TGG 0.520083 1_3:+72939740 Msa0139300:CDS
ATGAGGTGAAGAACAGCGCC+AGG 0.521707 1_3:-72943554 None:intergenic
CTGAGCTTCTCAGCGGCCAT+CGG 0.521732 1_3:-72939674 None:intergenic
ATCAAGTTCGCAGAAGCTGC+AGG 0.523514 1_3:-72944068 None:intergenic
AGTGAGTTTGAAAGAAGAGG+GGG 0.528376 1_3:-72939425 None:intergenic
ACTCGCACGGAATGAAGAAA+AGG 0.528494 1_3:-72939392 None:intergenic
TGTGCTATCGGCATCCCAAA+GGG 0.529449 1_3:+72942872 Msa0139300:CDS
CAAAGATCTCTATGCTGAAG+AGG 0.531854 1_3:+72951373 Msa0139300:CDS
GCCGTAGAAGGCGGCGACGG+TGG 0.532551 1_3:-72939735 None:intergenic
TATTGTCCGTGAAACCTTGA+AGG 0.534873 1_3:+72944871 Msa0139300:CDS
TGGTTCCATGATAGAAGAGC+AGG 0.535654 1_3:+72945600 Msa0139300:CDS
CAAGGGGATCCATGATAAGA+AGG 0.538201 1_3:-72942931 None:intergenic
GAAGAGAGAAGAACTTAAGC+CGG 0.538221 1_3:-72949967 None:intergenic
ACTTGTAGCAACATCCCAAA+GGG 0.539515 1_3:-72950755 None:intergenic
GATAGAAGTTCAGATACAAA+TGG 0.542603 1_3:-72947793 None:intergenic
GACTTGTAGCAACATCCCAA+AGG 0.543415 1_3:-72950756 None:intergenic
TTAGGCATTTATACAGAACC+TGG 0.546070 1_3:+72943536 Msa0139300:intron
AGCATTCTCAACTTTGACAT+GGG 0.546626 1_3:-72944788 None:intergenic
GGGCATTTCGGCACACAGAA+AGG 0.547271 1_3:+72950212 Msa0139300:CDS
TTTCATTCCATCTCGCTGCT+CGG 0.547958 1_3:-72941193 None:intergenic
CAATTTGAATACACTCTGCT+GGG 0.548023 1_3:+72945561 Msa0139300:CDS
CCGTGCCCATCAACCATACC+AGG 0.548181 1_3:-72944728 None:intergenic
ATGGATGGAAATTATAGGCC+AGG 0.548256 1_3:+72948198 Msa0139300:CDS
CTAGGAATGCTCCTGATGCA+AGG 0.552257 1_3:+72949271 Msa0139300:CDS
AAGATGTATGGTATATTCAT+GGG 0.555548 1_3:+72943248 Msa0139300:CDS
GGGGAACGCTCGCACTCGCA+CGG 0.557084 1_3:-72939405 None:intergenic
TCGATGCAGTTCGGTTAAGA+GGG 0.559242 1_3:+72949143 Msa0139300:intron
TTGAAGATTACCCTGAGCAC+CGG 0.559648 1_3:+72949948 Msa0139300:CDS
GTGCAATATGTCAAGATGTA+TGG 0.559915 1_3:+72943236 Msa0139300:CDS
CTGTTCTGGGAGATTATGCT+AGG 0.561609 1_3:+72949253 Msa0139300:CDS
TGCAAAACAATCCTGATATG+TGG 0.562075 1_3:+72940125 Msa0139300:CDS
CTACTGGAATTCCTTGGTGT+CGG 0.563467 1_3:+72944013 Msa0139300:CDS
CTTGACAAACAGATCAGTGC+AGG 0.563746 1_3:-72950016 None:intergenic
CCCAGGCTTATGAAAAGTAT+CGG 0.564406 1_3:-72950580 None:intergenic
CCTCTCTATTTGGAGGGATG+GGG 0.565359 1_3:-72951986 None:intergenic
TCGAGTAACGGAACATCGAT+CGG 0.565699 1_3:-72939710 None:intergenic
AGGAAAACAATGAGTAGCTA+TGG 0.566018 1_3:-72949996 None:intergenic
GATCTGCAATAGTGATTGGA+AGG 0.567155 1_3:-72947819 None:intergenic
GCGACGGTGGCGTCGAGTAA+CGG 0.567435 1_3:-72939722 None:intergenic
TTCATCTTGCAACTCGATAG+GGG 0.569366 1_3:-72951453 None:intergenic
AAAGAATGCTTTCTATTCCA+GGG 0.571488 1_3:+72951423 Msa0139300:CDS
CTTGAGTGGATTCCAGGATG+CGG 0.572251 1_3:-72943817 None:intergenic
TTATATATTTGAATCACCGT+TGG 0.573963 1_3:+72942956 Msa0139300:CDS
GTTATGCTTATATGTGCTAT+CGG 0.574920 1_3:+72942860 Msa0139300:CDS
TTACCTGCCGAGCAGCGAGA+TGG 0.576301 1_3:+72941186 Msa0139300:CDS
AGAACTTAAGCCGGTGCTCA+GGG 0.577552 1_3:-72949958 None:intergenic
AGCATGAGTGGCCAGCAAGA+TGG 0.577675 1_3:+72941582 Msa0139300:CDS
GTAGAAGGAGTGTATCTGAT+GGG 0.578468 1_3:-72947848 None:intergenic
ATTGCCATGTGCATATGCCT+CGG 0.578592 1_3:-72943421 None:intergenic
AACCATATAGTAAGTGCTCT+CGG 0.579003 1_3:-72951934 None:intergenic
TCTCTATGCTGAAGAGGCTG+CGG 0.580599 1_3:+72951379 Msa0139300:CDS
ATGGACAAGTCTATATCCCC+TGG 0.582635 1_3:-72951692 None:intergenic
TCCTGATGCAAGGGAATCTG+AGG 0.583164 1_3:+72949281 Msa0139300:CDS
TTGTTATGGATTCAATCATG+TGG 0.583890 1_3:+72950191 Msa0139300:CDS
ATGTGCTATCGGCATCCCAA+AGG 0.587524 1_3:+72942871 Msa0139300:CDS
GAGTGAGTTTGAAAGAAGAG+GGG 0.588426 1_3:-72939426 None:intergenic
AAAACAAATGCTGAAGCACC+AGG 0.588693 1_3:-72950617 None:intergenic
CGTAGAAGGAGTGTATCTGA+TGG 0.588720 1_3:-72947849 None:intergenic
TGATTCAAATATATAACCCA+AGG 0.590786 1_3:-72942949 None:intergenic
CGTGTAATCTGCAGATGCTG+AGG 0.591084 1_3:+72945497 Msa0139300:intron
TAATATCCTCTCTATTTGGA+GGG 0.596427 1_3:-72951992 None:intergenic
AAGCATTCTCAACTTTGACA+TGG 0.596752 1_3:-72944789 None:intergenic
CTCGGGGATATTGTGTTAGG+CGG 0.598215 1_3:-72943403 None:intergenic
AGGCCTCATTTCGAACGGAA+AGG 0.600634 1_3:+72941374 Msa0139300:CDS
TAGGAATGCTCCTGATGCAA+GGG 0.607736 1_3:+72949272 Msa0139300:CDS
TGTTATGGATTCAATCATGT+GGG 0.609757 1_3:+72950192 Msa0139300:CDS
AGTGCCGTAGAAGGCGGCGA+CGG 0.612587 1_3:-72939738 None:intergenic
GTTTACTTGACAGATTATGA+GGG 0.612625 1_3:+72945077 Msa0139300:intron
CGGCTCAGAGAGAAAGAGAA+CGG 0.616816 1_3:+72951399 Msa0139300:CDS
GATTCAAATATATAACCCAA+GGG 0.617377 1_3:-72942948 None:intergenic
GGCATGCAATGTAGATAGTG+TGG 0.618242 1_3:-72942910 None:intergenic
AAGAGTCATCATCACTCCGA+AGG 0.619001 1_3:-72951814 None:intergenic
GATTTCGATATGCTGGAACT+GGG 0.620969 1_3:-72943084 None:intergenic
ATCCCCGAGGCATATGCACA+TGG 0.622830 1_3:+72943417 Msa0139300:CDS
AATCTATGTGAAATCACGAA+GGG 0.623585 1_3:+72946382 Msa0139300:CDS
GTGAGTTTGAAAGAAGAGGG+GGG 0.626996 1_3:-72939424 None:intergenic
CCCCATCCCTCCAAATAGAG+AGG 0.629051 1_3:+72951986 Msa0139300:three_prime_UTR
AATAATCTACACTCACCACA+TGG 0.630833 1_3:-72951711 None:intergenic
AACAATGAGTAGCTATGGCG+CGG 0.631317 1_3:-72949991 None:intergenic
GTTTGTGCAGAAAACCCTTG+TGG 0.633463 1_3:+72951860 Msa0139300:three_prime_UTR
AGAGAGATGAATTTCTTCAG+CGG 0.635384 1_3:+72948024 Msa0139300:CDS
AGGTGTGACCTAACTTCTGG+CGG 0.636299 1_3:+72951838 Msa0139300:three_prime_UTR
AATGCTTATGATCTGTCGAA+TGG 0.640679 1_3:+72944805 Msa0139300:CDS
CGGGGAGAGAGAAGAGTTCG+GGG 0.641232 1_3:-72939549 None:intergenic
AGATCCAGTGCCGTAGAAGG+CGG 0.642341 1_3:-72939744 None:intergenic
AAGTAAACAACTCAGTGGTG+AGG 0.642832 1_3:+72945525 Msa0139300:CDS
TAATACCTGAACAATGATGT+CGG 0.643354 1_3:-72941226 None:intergenic
CAACGAGGCCTCATTTCGAA+CGG 0.643519 1_3:+72941369 Msa0139300:CDS
TATTCCTGATCTTGTCGCAG+CGG 0.643593 1_3:+72941613 Msa0139300:CDS
AGAACAGGATCCATCATTGG+TGG 0.644463 1_3:-72949237 None:intergenic
TCCGAACATGACAACAGCTG+AGG 0.645401 1_3:+72950846 Msa0139300:CDS
TCGAATGGCTAAACCCGAAG+AGG 0.647046 1_3:+72944820 Msa0139300:CDS
AGGACATGTAATTTGAACCC+AGG 0.648020 1_3:-72950597 None:intergenic
GCATTACTTGGGTATGACTG+TGG 0.648596 1_3:-72950778 None:intergenic
CGGCACTGGATCTAAGCAAG+AGG 0.649693 1_3:+72939754 Msa0139300:CDS
TCAGTGGTGAGGATTGGACC+TGG 0.651890 1_3:+72945536 Msa0139300:CDS
CTCAAACAGCTCCGACACCA+AGG 0.652968 1_3:-72944024 None:intergenic
AAATCTATGTGAAATCACGA+AGG 0.654119 1_3:+72946381 Msa0139300:CDS
CGAGTTGCAAGATGAAATGG+TGG 0.657463 1_3:+72951460 Msa0139300:CDS
TAGAAGGAGTGTATCTGATG+GGG 0.661038 1_3:-72947847 None:intergenic
TACGCTGCAATGTTTAACAG+AGG 0.663731 1_3:+72943108 Msa0139300:CDS
TGCATAGCTTTCTAGCAACG+AGG 0.670460 1_3:+72941354 Msa0139300:intron
TGCCATGTGCATATGCCTCG+GGG 0.678438 1_3:-72943419 None:intergenic
AACGATCTGTGAGAATTGCA+TGG 0.684162 1_3:+72941649 Msa0139300:CDS
ATACAAAATATAAAACCACA+AGG 0.688621 1_3:-72951875 None:intergenic
GGGATATAGACTTGTCCATG+TGG 0.697397 1_3:+72951696 Msa0139300:three_prime_UTR
GCGTAAGTTTGTGATCACCC+AGG 0.698935 1_3:+72947668 Msa0139300:CDS
GGATTATCCAAACTTCGATG+TGG 0.699508 1_3:-72944047 None:intergenic
ATTCAAATATATAACCCAAG+GGG 0.700367 1_3:-72942947 None:intergenic
AAAACGGCTTCAAATATGCG+AGG 0.702127 1_3:-72949526 None:intergenic
CGCCTAACACAATATCCCCG+AGG 0.707369 1_3:+72943404 Msa0139300:CDS
TACAAAATATAAAACCACAA+GGG 0.707514 1_3:-72951874 None:intergenic
AAATTAAGTAAACAACTCAG+TGG 0.731890 1_3:+72945520 Msa0139300:CDS
CTTGTAGCAACATCCCAAAG+GGG 0.739875 1_3:-72950754 None:intergenic
AAAACCCTAGACTCGCTCGG+AGG 0.756554 1_3:-72939595 None:intergenic
CAAATCTCTGAGCTTCTCAG+CGG 0.769266 1_3:-72939681 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAGTTAAGAATAAT+AGG - chr1_3:72939509-72939528 None:intergenic 10.0%
!!! TTACGTAAAAAAATAATTTT+TGG + chr1_3:72942207-72942226 Msa0139300:intron 10.0%
!!! TAATATTACATTACATTTTT+AGG - chr1_3:72945385-72945404 None:intergenic 10.0%
!! ACAAATATTAAAAAAAAAGT+TGG - chr1_3:72947328-72947347 None:intergenic 10.0%
!!! TAATTTTTAATTCTTTTTTC+TGG + chr1_3:72947404-72947423 Msa0139300:intron 10.0%
!!! AAATTTCATTTAATGTTTTA+TGG + chr1_3:72948349-72948368 Msa0139300:intron 10.0%
!! TGAACATAAAAAATAAAAAA+AGG - chr1_3:72949352-72949371 None:intergenic 10.0%
!! AACATAATCTAATGAAAAAT+GGG - chr1_3:72941696-72941715 None:intergenic 15.0%
!! AAACATAATCTAATGAAAAA+TGG - chr1_3:72941697-72941716 None:intergenic 15.0%
!! TAAATGGTAAAATTTAACAA+CGG - chr1_3:72942468-72942487 None:intergenic 15.0%
!!! CTTAATTATTTGTTAAGTAT+CGG + chr1_3:72943489-72943508 Msa0139300:intron 15.0%
!!! ATCAGTTTTAAATTTATTGT+TGG + chr1_3:72945220-72945239 Msa0139300:intron 15.0%
!!! TCAGTTTTAAATTTATTGTT+GGG + chr1_3:72945221-72945240 Msa0139300:intron 15.0%
!! TGTTCAAAAAAAATTATTGT+CGG + chr1_3:72945249-72945268 Msa0139300:intron 15.0%
!! ATATCAACTTTCTTTAAATA+TGG + chr1_3:72945330-72945349 Msa0139300:intron 15.0%
!!! AGATTTGTTATTGTAAATTT+TGG + chr1_3:72945990-72946009 Msa0139300:intron 15.0%
!! ATGATAAATAATATCATTAG+AGG - chr1_3:72946685-72946704 None:intergenic 15.0%
!!! ATTAATACTACAAATTTTCT+TGG + chr1_3:72947088-72947107 Msa0139300:intron 15.0%
!! TGTGTATAACTATTATTAAA+GGG - chr1_3:72947282-72947301 None:intergenic 15.0%
!! TTGTGTATAACTATTATTAA+AGG - chr1_3:72947283-72947302 None:intergenic 15.0%
!!! TATTTTTATATGAATTCAAG+AGG - chr1_3:72947727-72947746 None:intergenic 15.0%
!! ATGAAATTTCAAAATTCAAA+TGG - chr1_3:72948338-72948357 None:intergenic 15.0%
!!! ATTTCTAAAAGTATTTTAGA+AGG + chr1_3:72949006-72949025 Msa0139300:CDS 15.0%
!!! TTTCTAAAAGTATTTTAGAA+GGG + chr1_3:72949007-72949026 Msa0139300:CDS 15.0%
!! TCGAAAAGAATAAATAAAAA+GGG - chr1_3:72949127-72949146 None:intergenic 15.0%
!! ATCGAAAAGAATAAATAAAA+AGG - chr1_3:72949128-72949147 None:intergenic 15.0%
!! AACTAAATATTCAAATCAAA+GGG - chr1_3:72949675-72949694 None:intergenic 15.0%
!! AAACTAAATATTCAAATCAA+AGG - chr1_3:72949676-72949695 None:intergenic 15.0%
!! ATATATAAAATGATATATGC+AGG - chr1_3:72950460-72950479 None:intergenic 15.0%
!! ATTTATATTTCAATATGTAC+TGG - chr1_3:72951160-72951179 None:intergenic 15.0%
!!! TCTTTCCAATATTTTATATT+GGG + chr1_3:72951627-72951646 Msa0139300:intron 15.0%
!! TGAAAACATGAATATATATT+AGG + chr1_3:72952077-72952096 Msa0139300:three_prime_UTR 15.0%
!! GAAAACATGAATATATATTA+GGG + chr1_3:72952078-72952097 Msa0139300:three_prime_UTR 15.0%
!! GTAAAAAATGAAGAGAAAAA+AGG - chr1_3:72939475-72939494 None:intergenic 20.0%
!! AGAATAATAGGTATTTATAG+AGG - chr1_3:72939497-72939516 None:intergenic 20.0%
!! TCAATTATTATCAACAACAT+TGG - chr1_3:72939947-72939966 None:intergenic 20.0%
!!! GTATTCGTATTTGTTTTATA+TGG + chr1_3:72940966-72940985 Msa0139300:intron 20.0%
!! TAAAAAACATGTACTAAGAA+AGG - chr1_3:72941107-72941126 None:intergenic 20.0%
!! TCAAAATCTGTTTATAGAAA+AGG - chr1_3:72941562-72941581 None:intergenic 20.0%
!! TAGGAATTATCACTAAAAAA+TGG + chr1_3:72942261-72942280 Msa0139300:intron 20.0%
!! AATTATCAGAACTTAAAAGA+TGG - chr1_3:72943140-72943159 None:intergenic 20.0%
!! ATAAAAATTCCCAAATTGAA+GGG - chr1_3:72943213-72943232 None:intergenic 20.0%
!! AAATCTAACCTTAAAAAATG+AGG - chr1_3:72943574-72943593 None:intergenic 20.0%
!!! AATATAACAACTTTGCTTTT+GGG + chr1_3:72943842-72943861 Msa0139300:CDS 20.0%
!! TGAATGTTAAAATCAAGAAT+TGG + chr1_3:72944129-72944148 Msa0139300:intron 20.0%
!! GCACTTAATAAATTTGAAAA+TGG - chr1_3:72944508-72944527 None:intergenic 20.0%
!! TTTCAAATTTATTAAGTGCA+TGG + chr1_3:72944509-72944528 Msa0139300:intron 20.0%
!! TTTAGTATAAATATTGGTCA+TGG - chr1_3:72944551-72944570 None:intergenic 20.0%
!!! TCTTTTCTTATTTCTAACAA+AGG + chr1_3:72944641-72944660 Msa0139300:intron 20.0%
!! TAAAAGTAGAATATGCAAAA+GGG - chr1_3:72945003-72945022 None:intergenic 20.0%
!! ATAAAAGTAGAATATGCAAA+AGG - chr1_3:72945004-72945023 None:intergenic 20.0%
!! GTTCAAAAAAAATTATTGTC+GGG + chr1_3:72945250-72945269 Msa0139300:intron 20.0%
!!! TTTAAAGAAAGTTGATATTG+TGG - chr1_3:72945328-72945347 None:intergenic 20.0%
!!! AAAGATTGATTCTGTTATTA+TGG - chr1_3:72945850-72945869 None:intergenic 20.0%
!! TACTAAAACTGATAAAACAA+TGG - chr1_3:72946279-72946298 None:intergenic 20.0%
!!! GTATTTTATTTCCCTATTTA+TGG + chr1_3:72946296-72946315 Msa0139300:intron 20.0%
!! GGTTAATCATATTCAAATTA+TGG - chr1_3:72946772-72946791 None:intergenic 20.0%
!!! TTTTGACTTGTTATTCATTA+CGG + chr1_3:72946796-72946815 Msa0139300:intron 20.0%
!!! TAGAGACAATTTTTTTCAAT+AGG - chr1_3:72947008-72947027 None:intergenic 20.0%
!! TAATATTTGTGAAATATGCA+AGG + chr1_3:72947338-72947357 Msa0139300:intron 20.0%
!! TTACAAGGTAAATATAGATT+AGG - chr1_3:72947496-72947515 None:intergenic 20.0%
!! TAACTTACAAGAACAAATAT+AGG - chr1_3:72947949-72947968 None:intergenic 20.0%
!! GTTATATTGTTGAAAATTGT+AGG + chr1_3:72947965-72947984 Msa0139300:intron 20.0%
!! CAGACATTAATTATAATACT+TGG - chr1_3:72948150-72948169 None:intergenic 20.0%
!!! TCAAAATGTTGATTTTTTGA+AGG + chr1_3:72948225-72948244 Msa0139300:CDS 20.0%
!!! TCATTTTTTATGTAATTTCG+TGG + chr1_3:72948295-72948314 Msa0139300:intron 20.0%
!!! TTTTGTTGTATTTACATAGT+TGG + chr1_3:72948489-72948508 Msa0139300:intron 20.0%
!! ATGTTTGAACAATTAACAAT+GGG - chr1_3:72948589-72948608 None:intergenic 20.0%
!! TTAATTGTTCAAACATCTAA+GGG + chr1_3:72948593-72948612 Msa0139300:intron 20.0%
!!! TTCTAAAAGTATTTTAGAAG+GGG + chr1_3:72949008-72949027 Msa0139300:CDS 20.0%
!! TTTATGTTCATTTATTTCCT+TGG + chr1_3:72949362-72949381 Msa0139300:intron 20.0%
!!! AAAATAATATCAGTCTTGTA+TGG + chr1_3:72949699-72949718 Msa0139300:intron 20.0%
!!! ACTTGATGACAAATAATTAT+TGG + chr1_3:72949851-72949870 Msa0139300:intron 20.0%
!!! CTTGATGACAAATAATTATT+GGG + chr1_3:72949852-72949871 Msa0139300:intron 20.0%
!! AAATAGTCCATTAACAAATT+GGG - chr1_3:72950948-72950967 None:intergenic 20.0%
!! ATACAATCAAACAATTTACA+AGG - chr1_3:72951260-72951279 None:intergenic 20.0%
!! ATATAAAATATTGGAAAGAG+AGG - chr1_3:72951626-72951645 None:intergenic 20.0%
!!! CTCTTTCCAATATTTTATAT+TGG + chr1_3:72951626-72951645 Msa0139300:intron 20.0%
!!! GATTATTGATTTACTAATTG+AGG + chr1_3:72951727-72951746 Msa0139300:three_prime_UTR 20.0%
!!! ATTTTTGTTCAATACAAAGA+TGG - chr1_3:72951786-72951805 None:intergenic 20.0%
!! ATCTTTGTATTGAACAAAAA+TGG + chr1_3:72951785-72951804 Msa0139300:three_prime_UTR 20.0%
!! TACAAAATATAAAACCACAA+GGG - chr1_3:72951877-72951896 None:intergenic 20.0%
!! ATACAAAATATAAAACCACA+AGG - chr1_3:72951878-72951897 None:intergenic 20.0%
!!! TTTTCCTTCAATTGATTTTT+AGG + chr1_3:72951899-72951918 Msa0139300:three_prime_UTR 20.0%
!!! TTTCCTTCAATTGATTTTTA+GGG + chr1_3:72951900-72951919 Msa0139300:three_prime_UTR 20.0%
!! AAAATAATATCCTCTCTATT+TGG - chr1_3:72951999-72952018 None:intergenic 20.0%
!! AATGAATTACACGCATTTTA+GGG + chr1_3:72939825-72939844 Msa0139300:intron 25.0%
!!! TTGTTGGATTTTTGGATTTA+CGG + chr1_3:72940235-72940254 Msa0139300:intron 25.0%
! ACAACGACAAAAATTACTAT+CGG - chr1_3:72940324-72940343 None:intergenic 25.0%
!!! AAGCTATCTTTTCAAGATAT+TGG - chr1_3:72940524-72940543 None:intergenic 25.0%
! AAGGCGTAATTAAATATAGA+TGG + chr1_3:72941157-72941176 Msa0139300:CDS 25.0%
! AAAGTAATGTTAAGAAACTG+CGG - chr1_3:72941443-72941462 None:intergenic 25.0%
! ATCATTGAACTATAAGTTTC+AGG - chr1_3:72941482-72941501 None:intergenic 25.0%
!! ACTGAACTTGTTTATAGAAA+AGG - chr1_3:72941520-72941539 None:intergenic 25.0%
! AAGGTATAAAAGATCTTAAG+AGG - chr1_3:72941543-72941562 None:intergenic 25.0%
! TAACTAAAACTCAATCTTTC+AGG - chr1_3:72941875-72941894 None:intergenic 25.0%
!!! TGTACAGTAATGGATTTATA+AGG + chr1_3:72941900-72941919 Msa0139300:intron 25.0%
!!! TGTGATGGTCTATAATTTTT+TGG + chr1_3:72941945-72941964 Msa0139300:intron 25.0%
!!! GTGATGGTCTATAATTTTTT+GGG + chr1_3:72941946-72941965 Msa0139300:intron 25.0%
! GTTGGAAAATATATTGTAGT+TGG + chr1_3:72942073-72942092 Msa0139300:intron 25.0%
!! TATTGTAGTTGGTATTAGTA+TGG + chr1_3:72942084-72942103 Msa0139300:intron 25.0%
! CAAATACTCTTATAGATGAT+CGG + chr1_3:72942168-72942187 Msa0139300:intron 25.0%
!!! TAATTTTTGGCAAGTTACAT+AGG + chr1_3:72942220-72942239 Msa0139300:intron 25.0%
!!! AATTTTTGGCAAGTTACATA+GGG + chr1_3:72942221-72942240 Msa0139300:intron 25.0%
!! GGAAAATCATTTTCTAATCT+AGG + chr1_3:72942242-72942261 Msa0139300:intron 25.0%
! ATGTAATCTGAATTCTTGTA+AGG + chr1_3:72942622-72942641 Msa0139300:intron 25.0%
! ATTCAAATATATAACCCAAG+GGG - chr1_3:72942950-72942969 None:intergenic 25.0%
! GATTCAAATATATAACCCAA+GGG - chr1_3:72942951-72942970 None:intergenic 25.0%
! TGATTCAAATATATAACCCA+AGG - chr1_3:72942952-72942971 None:intergenic 25.0%
! TTATATATTTGAATCACCGT+TGG + chr1_3:72942956-72942975 Msa0139300:CDS 25.0%
!!! ATATTCACTTTTATGTTTGC+AGG + chr1_3:72943181-72943200 Msa0139300:intron 25.0%
! CATAAAAATTCCCAAATTGA+AGG - chr1_3:72943214-72943233 None:intergenic 25.0%
! AAGATGTATGGTATATTCAT+GGG + chr1_3:72943248-72943267 Msa0139300:CDS 25.0%
!! AAGTAAGTTTTTACTGAAAC+AGG + chr1_3:72943454-72943473 Msa0139300:intron 25.0%
!! GAATATAACAACTTTGCTTT+TGG + chr1_3:72943841-72943860 Msa0139300:CDS 25.0%
! AAATGCTGATAAGATATTCA+AGG - chr1_3:72943868-72943887 None:intergenic 25.0%
!!! TCTGGTTTGTTGAAAATAAT+AGG + chr1_3:72943980-72943999 Msa0139300:intron 25.0%
! TTGAAAATAATAGGTCTGTT+TGG + chr1_3:72943989-72944008 Msa0139300:intron 25.0%
!!! TGAGACAAATGTTTTAATAG+GGG - chr1_3:72944167-72944186 None:intergenic 25.0%
!!! GTGAGACAAATGTTTTAATA+GGG - chr1_3:72944168-72944187 None:intergenic 25.0%
!!! TGTGAGACAAATGTTTTAAT+AGG - chr1_3:72944169-72944188 None:intergenic 25.0%
! TCTGTTTAGCATGTTATTAT+TGG + chr1_3:72944271-72944290 Msa0139300:intron 25.0%
! AAAAAACAAAGATCAAGTCA+AGG - chr1_3:72944413-72944432 None:intergenic 25.0%
!!! TGACTTGATCTTTGTTTTTT+TGG + chr1_3:72944413-72944432 Msa0139300:intron 25.0%
!!! TTTCTTATTTCTAACAAAGG+TGG + chr1_3:72944644-72944663 Msa0139300:intron 25.0%
! TCATAGTTGAAGATGAAAAT+GGG + chr1_3:72944846-72944865 Msa0139300:CDS 25.0%
! TGATGTTCTTGTTCAATATA+AGG + chr1_3:72944898-72944917 Msa0139300:CDS 25.0%
! ATAATCTGTCAAGTAAACAT+TGG - chr1_3:72945075-72945094 None:intergenic 25.0%
!!! GTTTTAAATTTATTGTTGGG+AGG + chr1_3:72945224-72945243 Msa0139300:intron 25.0%
!! TATGAACGAATATGTTGTTT+CGG + chr1_3:72945405-72945424 Msa0139300:intron 25.0%
! AAATTAAGTAAACAACTCAG+TGG + chr1_3:72945520-72945539 Msa0139300:CDS 25.0%
! ATAACAAATCTTATAACAGC+AGG - chr1_3:72945981-72946000 None:intergenic 25.0%
! AGATATTATTGAAGTCAACA+TGG - chr1_3:72946022-72946041 None:intergenic 25.0%
! TGACTTCAATAATATCTTGA+TGG + chr1_3:72946025-72946044 Msa0139300:intron 25.0%
!! AGGAAGTATAACCATAAATA+GGG - chr1_3:72946310-72946329 None:intergenic 25.0%
!! AAGGAAGTATAACCATAAAT+AGG - chr1_3:72946311-72946330 None:intergenic 25.0%
! TGAATAACAAGTCAAAATTC+AGG - chr1_3:72946793-72946812 None:intergenic 25.0%
!! TATAAGTTAGCTTATTGAGA+TGG - chr1_3:72946920-72946939 None:intergenic 25.0%
! TAATGAGGAAACTTTATCTT+GGG - chr1_3:72947231-72947250 None:intergenic 25.0%
!!! TAATTCTTTTTTCTGGCAAT+TGG + chr1_3:72947411-72947430 Msa0139300:intron 25.0%
!!! AATTCTTTTTTCTGGCAATT+GGG + chr1_3:72947412-72947431 Msa0139300:intron 25.0%
! AAGGTAAATATAGATTAGGA+TGG - chr1_3:72947492-72947511 None:intergenic 25.0%
! TATCCTAAAACAAATGAAAC+AGG - chr1_3:72947608-72947627 None:intergenic 25.0%
!!! GTTTCATTTGTTTTAGGATA+TGG + chr1_3:72947608-72947627 Msa0139300:intron 25.0%
! TTATATGAATTCAAGAGGAT+AGG - chr1_3:72947722-72947741 None:intergenic 25.0%
!! ATGAGTTTAAGACTTCTATA+AGG - chr1_3:72947885-72947904 None:intergenic 25.0%
! ACAACAAAAGATTTCTAACA+AGG - chr1_3:72948478-72948497 None:intergenic 25.0%
! GATGTTTGAACAATTAACAA+TGG - chr1_3:72948590-72948609 None:intergenic 25.0%
! GTTAATTGTTCAAACATCTA+AGG + chr1_3:72948592-72948611 Msa0139300:intron 25.0%
! AAAACCAACAAAAAAATCAG+AGG - chr1_3:72948643-72948662 None:intergenic 25.0%
! AAAAAGATCATTGTGATTTG+AGG - chr1_3:72948820-72948839 None:intergenic 25.0%
!! TCAAATCACAATGATCTTTT+TGG + chr1_3:72948819-72948838 Msa0139300:CDS 25.0%
!! TTGATTTGATTCTTCATTTC+TGG + chr1_3:72948928-72948947 Msa0139300:intron 25.0%
!!! TCTAAAAGTATTTTAGAAGG+GGG + chr1_3:72949009-72949028 Msa0139300:CDS 25.0%
!!! TAAGATGTTTTAGATGCATA+AGG - chr1_3:72949036-72949055 None:intergenic 25.0%
! GTTTACTATTGTAGCAAAAA+GGG - chr1_3:72949313-72949332 None:intergenic 25.0%
! TGTTTACTATTGTAGCAAAA+AGG - chr1_3:72949314-72949333 None:intergenic 25.0%
! ATGAATATCATATAACCCTT+AGG - chr1_3:72949439-72949458 None:intergenic 25.0%
!!! AATCATTGTAGCTTTATATC+TGG - chr1_3:72949497-72949516 None:intergenic 25.0%
!!! AGCATTTAGTTTGTTTTTTC+TGG + chr1_3:72949769-72949788 Msa0139300:intron 25.0%
!!! TAGTTCAGTTGATATTTTAC+AGG - chr1_3:72949885-72949904 None:intergenic 25.0%
! ATGCTTCTTTCAAAACAAAA+AGG - chr1_3:72950343-72950362 None:intergenic 25.0%
!! GGAAAAAACTTTGTTATGAA+TGG - chr1_3:72950434-72950453 None:intergenic 25.0%
!!! TGAATGTCTTATTTACAACA+GGG + chr1_3:72950486-72950505 Msa0139300:intron 25.0%
! CAAATAGTCCATTAACAAAT+TGG - chr1_3:72950949-72950968 None:intergenic 25.0%
!!! AAAATTCTTTTGACTGTATC+AGG - chr1_3:72951018-72951037 None:intergenic 25.0%
!!! AGAAGTTAATTTTAATACCG+TGG + chr1_3:72951507-72951526 Msa0139300:intron 25.0%
!!! GAAGTTAATTTTAATACCGT+GGG + chr1_3:72951508-72951527 Msa0139300:intron 25.0%
!!! TGCTAATTGATTTTGAATGA+AGG - chr1_3:72951557-72951576 None:intergenic 25.0%
! TCAGTCCCAATATAAAATAT+TGG - chr1_3:72951635-72951654 None:intergenic 25.0%
! TTACTAATTGAGGATTATGT+TGG + chr1_3:72951737-72951756 Msa0139300:three_prime_UTR 25.0%
! TACTAATTGAGGATTATGTT+GGG + chr1_3:72951738-72951757 Msa0139300:three_prime_UTR 25.0%
!!! TTCCTTCAATTGATTTTTAG+GGG + chr1_3:72951901-72951920 Msa0139300:three_prime_UTR 25.0%
! ATTTACATATCAACAATAGC+TGG - chr1_3:72952122-72952141 None:intergenic 25.0%
GAAGAAAAGGAAAACGTAAT+TGG - chr1_3:72939382-72939401 None:intergenic 30.0%
! CAATGAATTACACGCATTTT+AGG + chr1_3:72939824-72939843 Msa0139300:intron 30.0%
! AGATAATGTGATGCTGTTTA+CGG + chr1_3:72940007-72940026 Msa0139300:intron 30.0%
!!! TTTGCTGTTTTTTGTGTGTT+TGG + chr1_3:72940034-72940053 Msa0139300:intron 30.0%
CGGTTACCTACAAAATATTA+CGG + chr1_3:72940255-72940274 Msa0139300:intron 30.0%
! TTGAAGCCGTAATATTTTGT+AGG - chr1_3:72940264-72940283 None:intergenic 30.0%
! GATAGTAATTTTTGTCGTTG+TGG + chr1_3:72940323-72940342 Msa0139300:intron 30.0%
! CTATGTGGAAAGAACATTTT+TGG - chr1_3:72940691-72940710 None:intergenic 30.0%
!! CAAATGAGTATTGAGTCAAT+GGG - chr1_3:72940728-72940747 None:intergenic 30.0%
ATAACCAAATATCGAGTCAA+CGG - chr1_3:72940837-72940856 None:intergenic 30.0%
TTTGCTGAAATTTCCTTTAG+AGG + chr1_3:72940868-72940887 Msa0139300:intron 30.0%
TAATACCTGAACAATGATGT+CGG - chr1_3:72941229-72941248 None:intergenic 30.0%
! TTCATAGTTTTTCTACATCC+TGG + chr1_3:72941311-72941330 Msa0139300:intron 30.0%
GCTCAACATTATATTAGTTC+AGG + chr1_3:72941411-72941430 Msa0139300:CDS 30.0%
!!! GAGGTTTTTGATTTTTCAAG+AGG + chr1_3:72941766-72941785 Msa0139300:CDS 30.0%
AGCTTAAACAATCATTGAAC+AGG + chr1_3:72941815-72941834 Msa0139300:CDS 30.0%
!! AGTTACTTGTTGTACAGTAA+TGG + chr1_3:72941890-72941909 Msa0139300:intron 30.0%
TTATAGACCATCACATGTTA+GGG - chr1_3:72941940-72941959 None:intergenic 30.0%
ATTATAGACCATCACATGTT+AGG - chr1_3:72941941-72941960 None:intergenic 30.0%
TAGATTGAAATACTAGCAAG+TGG + chr1_3:72941998-72942017 Msa0139300:intron 30.0%
TTGTACCTGTATCTACTTAT+TGG + chr1_3:72942388-72942407 Msa0139300:intron 30.0%
TTAAGCCAATAAGTAGATAC+AGG - chr1_3:72942396-72942415 None:intergenic 30.0%
GATATCAAAGACACATACAA+AGG - chr1_3:72942518-72942537 None:intergenic 30.0%
CTTTCAGGAAAACTATAACA+AGG - chr1_3:72942651-72942670 None:intergenic 30.0%
! ATTTCACTAAGCATTGTACT+TGG + chr1_3:72942806-72942825 Msa0139300:intron 30.0%
GTTATGCTTATATGTGCTAT+CGG + chr1_3:72942860-72942879 Msa0139300:CDS 30.0%
CAAGATGTATGGTATATTCA+TGG + chr1_3:72943247-72943266 Msa0139300:CDS 30.0%
TGTATAAATGCCTAAACAGA+GGG - chr1_3:72943531-72943550 None:intergenic 30.0%
!!! GTTCTTCACCTCATTTTTTA+AGG + chr1_3:72943563-72943582 Msa0139300:CDS 30.0%
ACAAAGTTCAATCATGTCAT+TGG - chr1_3:72943638-72943657 None:intergenic 30.0%
GATTGAACTTTGTTAGAATG+TGG + chr1_3:72943645-72943664 Msa0139300:intron 30.0%
ATATAGTCTATGCAGCTTAA+AGG - chr1_3:72943688-72943707 None:intergenic 30.0%
CATAGACTATATCATACTTG+TGG + chr1_3:72943696-72943715 Msa0139300:intron 30.0%
AAGATTAGATCCTGCATTAT+TGG + chr1_3:72943726-72943745 Msa0139300:intron 30.0%
AGATTAGATCCTGCATTATT+GGG + chr1_3:72943727-72943746 Msa0139300:intron 30.0%
AGTTGTTATATTCTCTTGAG+TGG - chr1_3:72943834-72943853 None:intergenic 30.0%
! TGACGATACTGAAGTTTTTA+AGG + chr1_3:72943895-72943914 Msa0139300:CDS 30.0%
!!! GAGACAAATGTTTTAATAGG+GGG - chr1_3:72944166-72944185 None:intergenic 30.0%
AAGCATTCTATTAAGATGCT+AGG - chr1_3:72944200-72944219 None:intergenic 30.0%
TTGTGAACATTAAGGACAAA+AGG - chr1_3:72944240-72944259 None:intergenic 30.0%
ATAACATGCTAAACAGATAG+TGG - chr1_3:72944268-72944287 None:intergenic 30.0%
ATAAGCAAAACTTAGAGACT+AGG - chr1_3:72944378-72944397 None:intergenic 30.0%
!!! CAATTTTAAAGCATGTTCTG+TGG + chr1_3:72944446-72944465 Msa0139300:intron 30.0%
TCATATAGCATGAAGATATG+TGG - chr1_3:72944480-72944499 None:intergenic 30.0%
CATATCTTCATGCTATATGA+AGG + chr1_3:72944480-72944499 Msa0139300:intron 30.0%
! TTTTTCTTAATCGAGTAAGC+AGG + chr1_3:72944691-72944710 Msa0139300:intron 30.0%
CTCATAGTTGAAGATGAAAA+TGG + chr1_3:72944845-72944864 Msa0139300:CDS 30.0%
TGTTTACTTGACAGATTATG+AGG + chr1_3:72945076-72945095 Msa0139300:intron 30.0%
GTTTACTTGACAGATTATGA+GGG + chr1_3:72945077-72945096 Msa0139300:intron 30.0%
GGAAAGACAATCACATTATA+TGG + chr1_3:72945187-72945206 Msa0139300:intron 30.0%
AGGTGCAACAAATTTATGAT+AGG - chr1_3:72945458-72945477 None:intergenic 30.0%
GATTCGAGACGATTTAATAA+AGG - chr1_3:72945478-72945497 None:intergenic 30.0%
!! CACAGGTCATTTTCAATATT+AGG + chr1_3:72945671-72945690 Msa0139300:intron 30.0%
CAAGTTAGTTACAAGTTGTT+AGG - chr1_3:72945769-72945788 None:intergenic 30.0%
! TGAGTTTCTCTTTTCCTAAT+AGG + chr1_3:72945907-72945926 Msa0139300:intron 30.0%
AAGCTCTACATATTCCTATT+AGG - chr1_3:72945924-72945943 None:intergenic 30.0%
! TTGAGGTATTTCCACTATTT+GGG + chr1_3:72945952-72945971 Msa0139300:intron 30.0%
! CAATAATATCTTGATGGCAT+TGG + chr1_3:72946031-72946050 Msa0139300:intron 30.0%
AAGACATTATATGACATCCA+AGG - chr1_3:72946063-72946082 None:intergenic 30.0%
! TCCTCCAATTTAACTTCTAT+TGG + chr1_3:72946097-72946116 Msa0139300:intron 30.0%
TCCAATAGAAGTTAAATTGG+AGG - chr1_3:72946101-72946120 None:intergenic 30.0%
GACTCCAATAGAAGTTAAAT+TGG - chr1_3:72946104-72946123 None:intergenic 30.0%
!!! TGGCTTGTTTTGTTTTTTCT+AGG + chr1_3:72946177-72946196 Msa0139300:intron 30.0%
!!! GGAAAACAGATTTTTGGTTA+TGG + chr1_3:72946342-72946361 Msa0139300:intron 30.0%
AAATCTATGTGAAATCACGA+AGG + chr1_3:72946381-72946400 Msa0139300:CDS 30.0%
AATCTATGTGAAATCACGAA+GGG + chr1_3:72946382-72946401 Msa0139300:CDS 30.0%
TCCAATGAGCTCTTAAAAAT+CGG - chr1_3:72946550-72946569 None:intergenic 30.0%
TGAAAATAAGTGAGCTTCAA+AGG - chr1_3:72946650-72946669 None:intergenic 30.0%
! TTGTATATTTTCTCCATAGC+TGG + chr1_3:72946729-72946748 Msa0139300:intron 30.0%
! TGTATATTTTCTCCATAGCT+GGG + chr1_3:72946730-72946749 Msa0139300:intron 30.0%
GCTTATTGAGATGGTAAAAT+AGG - chr1_3:72946911-72946930 None:intergenic 30.0%
TCAATAGGTGCTTAAATTAG+AGG - chr1_3:72946993-72947012 None:intergenic 30.0%
CTGCATCTAGTAATTTGAAA+GGG - chr1_3:72947041-72947060 None:intergenic 30.0%
ACTGCATCTAGTAATTTGAA+AGG - chr1_3:72947042-72947061 None:intergenic 30.0%
GTATACACAGAAGACAAAAA+AGG + chr1_3:72947138-72947157 Msa0139300:intron 30.0%
CTAATGAGGAAACTTTATCT+TGG - chr1_3:72947232-72947251 None:intergenic 30.0%
TTTGTGAAATATGCAAGGTT+TGG + chr1_3:72947343-72947362 Msa0139300:intron 30.0%
TTTACCTTGTAATATCTGCA+TGG + chr1_3:72947504-72947523 Msa0139300:intron 30.0%
!! GATCCTGTTTCATTTGTTTT+AGG + chr1_3:72947602-72947621 Msa0139300:intron 30.0%
AATTCAAGAGGATAGGAAAA+GGG - chr1_3:72947715-72947734 None:intergenic 30.0%
GATAGAAGTTCAGATACAAA+TGG - chr1_3:72947796-72947815 None:intergenic 30.0%
TTTGTATCTGAACTTCTATC+AGG + chr1_3:72947796-72947815 Msa0139300:CDS 30.0%
ATAATTAATGTCTGCACCTT+TGG + chr1_3:72948156-72948175 Msa0139300:intron 30.0%
CAGAAATGGATGGAAATTAT+AGG + chr1_3:72948193-72948212 Msa0139300:intron 30.0%
TGAAGGATCAAGATGTAATA+CGG + chr1_3:72948242-72948261 Msa0139300:CDS 30.0%
!! TTTACCATTGTTGACTTGTT+CGG + chr1_3:72948431-72948450 Msa0139300:intron 30.0%
AGTAGTTTAAACTCCAAACA+AGG - chr1_3:72948549-72948568 None:intergenic 30.0%
AAACTACTATCTTGTGATCT+TGG + chr1_3:72948561-72948580 Msa0139300:intron 30.0%
CTATGATTATAATCAATGCC+AGG + chr1_3:72948681-72948700 Msa0139300:intron 30.0%
GCAAAATAAAACAAAAGACC+TGG - chr1_3:72948702-72948721 None:intergenic 30.0%
!!! CTAAAAGTATTTTAGAAGGG+GGG + chr1_3:72949010-72949029 Msa0139300:CDS 30.0%
CATCTTATGTGAAACTTCTA+CGG + chr1_3:72949049-72949068 Msa0139300:CDS 30.0%
! TTATTCTTTTCGATGCAGTT+CGG + chr1_3:72949134-72949153 Msa0139300:intron 30.0%
TAAATTGATCGAGACATTCT+TGG + chr1_3:72949173-72949192 Msa0139300:CDS 30.0%
! ACAAATTGTTTTCCAATCTG+TGG - chr1_3:72949216-72949235 None:intergenic 30.0%
! TATGTTTCATTCGTTTTCTC+TGG + chr1_3:72949458-72949477 Msa0139300:intron 30.0%
TTTATATCTGGAAGTAAGAG+GGG - chr1_3:72949485-72949504 None:intergenic 30.0%
CTTTATATCTGGAAGTAAGA+GGG - chr1_3:72949486-72949505 None:intergenic 30.0%
AACAACAACAACAACAAACA+AGG - chr1_3:72949604-72949623 None:intergenic 30.0%
ATTCAAATCAAAGGGAATAG+TGG - chr1_3:72949667-72949686 None:intergenic 30.0%
! TAGTCTGTGTCTGATATTTT+TGG + chr1_3:72950145-72950164 Msa0139300:intron 30.0%
TTGTTATGGATTCAATCATG+TGG + chr1_3:72950191-72950210 Msa0139300:CDS 30.0%
TGTTATGGATTCAATCATGT+GGG + chr1_3:72950192-72950211 Msa0139300:CDS 30.0%
!!! AAAGAAGCATACTGTTTTTG+AGG + chr1_3:72950353-72950372 Msa0139300:intron 30.0%
!!! AAGAAGCATACTGTTTTTGA+GGG + chr1_3:72950354-72950373 Msa0139300:intron 30.0%
TAAAATGATATATGCAGGAG+TGG - chr1_3:72950455-72950474 None:intergenic 30.0%
!! CTGAATGTCTTATTTACAAC+AGG + chr1_3:72950485-72950504 Msa0139300:intron 30.0%
! CAAGAAAGAGCACAAATAAT+TGG + chr1_3:72950694-72950713 Msa0139300:intron 30.0%
GAACAAAAACTGCATTACTT+GGG - chr1_3:72950792-72950811 None:intergenic 30.0%
GACTAATTTCATGAATTTGC+AGG + chr1_3:72950919-72950938 Msa0139300:intron 30.0%
TATCAGGAAATCTCGTATAT+GGG - chr1_3:72951002-72951021 None:intergenic 30.0%
AACTTCTCAATTTCTTGCTT+TGG - chr1_3:72951112-72951131 None:intergenic 30.0%
AGAAATTGAGAAGTTTGTAC+AGG + chr1_3:72951117-72951136 Msa0139300:intron 30.0%
AAAGAATGCTTTCTATTCCA+GGG + chr1_3:72951423-72951442 Msa0139300:CDS 30.0%
AAGAGAGGAAAAACTAAACT+TGG - chr1_3:72951611-72951630 None:intergenic 30.0%
! ATTTTATATTGGGACTGATG+TGG + chr1_3:72951637-72951656 Msa0139300:intron 30.0%
! TAGCTAAAACTCTGAAAATC+AGG - chr1_3:72951671-72951690 None:intergenic 30.0%
!! GATTATGTTGGGTCATTTTA+AGG + chr1_3:72951749-72951768 Msa0139300:three_prime_UTR 30.0%
TACCCCTAAAAATCAATTGA+AGG - chr1_3:72951906-72951925 None:intergenic 30.0%
TAATATCCTCTCTATTTGGA+GGG - chr1_3:72951995-72952014 None:intergenic 30.0%
ATAATATCCTCTCTATTTGG+AGG - chr1_3:72951996-72952015 None:intergenic 30.0%
GACGCTACTAAGCTATATAT+AGG - chr1_3:72939345-72939364 None:intergenic 35.0%
TGAGTGAGTTTGAAAGAAGA+GGG - chr1_3:72939430-72939449 None:intergenic 35.0%
! TTCTAGAGAGAGAGAGATTT+CGG - chr1_3:72939572-72939591 None:intergenic 35.0%
TGCAAAACAATCCTGATATG+TGG + chr1_3:72940125-72940144 Msa0139300:CDS 35.0%
!!! TACCAAGTTTTTTGCATTGC+AGG + chr1_3:72940189-72940208 Msa0139300:CDS 35.0%
AACCTGCAATGCAAAAAACT+TGG - chr1_3:72940194-72940213 None:intergenic 35.0%
GTTGTTTACTGAACAGTTGT+TGG + chr1_3:72940219-72940238 Msa0139300:intron 35.0%
! CTGAACAGTTGTTGGATTTT+TGG + chr1_3:72940227-72940246 Msa0139300:intron 35.0%
! CATTGACTATGCATGGATAT+AGG - chr1_3:72940301-72940320 None:intergenic 35.0%
GCTTAAAAGTAACGTACGAT+AGG + chr1_3:72940443-72940462 Msa0139300:intron 35.0%
CTAGCTGAAATTTCCTTTAG+AGG + chr1_3:72940547-72940566 Msa0139300:intron 35.0%
TTCTTTCCACATTGCTTTGT+TGG + chr1_3:72940589-72940608 Msa0139300:intron 35.0%
CTTGCTGAAATTTCCTTTAG+AGG + chr1_3:72940655-72940674 Msa0139300:intron 35.0%
!! TTCTTTCCACATAGCTTTGT+TGG + chr1_3:72940697-72940716 Msa0139300:intron 35.0%
!! CCAAATGAGTATTGAGTCAA+TGG - chr1_3:72940729-72940748 None:intergenic 35.0%
!! CCATTGACTCAATACTCATT+TGG + chr1_3:72940726-72940745 Msa0139300:intron 35.0%
CTTGCTGAAATTTCCTTTAG+AGG + chr1_3:72940655-72940674 Msa0139300:intron 35.0%
!! CAAATGAGTATTGAGTCAAC+GGG - chr1_3:72940941-72940960 None:intergenic 35.0%
!! CCAAATGAGTATTGAGTCAA+CGG - chr1_3:72940729-72940748 None:intergenic 35.0%
TATGCTTGTATCTTTCACTC+AGG + chr1_3:72941128-72941147 Msa0139300:intron 35.0%
GTTCAGGTATTAGCTGTATT+TGG + chr1_3:72941237-72941256 Msa0139300:intron 35.0%
AAAAACCAACAATGAGATCC+AGG - chr1_3:72941332-72941351 None:intergenic 35.0%
!!! AACAGATTTTGAAGCATGAG+TGG + chr1_3:72941570-72941589 Msa0139300:intron 35.0%
CTTAAAACCCTAACATGTGA+TGG + chr1_3:72941930-72941949 Msa0139300:intron 35.0%
!!! ATTGGTTTTAACTAGCGAGT+TGG + chr1_3:72942055-72942074 Msa0139300:intron 35.0%
TGCAGGAAAAGGAAACTAAA+TGG - chr1_3:72942484-72942503 None:intergenic 35.0%
CATTACTACTGAGTCTTCTA+AGG - chr1_3:72942575-72942594 None:intergenic 35.0%
TACATCTTCTGAGTCTTCTA+AGG - chr1_3:72942607-72942626 None:intergenic 35.0%
! AAGCTTTTGCACAATAGCTT+AGG - chr1_3:72942674-72942693 None:intergenic 35.0%
TAAGCTATTGTGCAAAAGCT+TGG + chr1_3:72942673-72942692 Msa0139300:intron 35.0%
TCTCTTTATCATGCATGACT+TGG + chr1_3:72942715-72942734 Msa0139300:intron 35.0%
! TTTATCATGCATGACTTGGA+TGG + chr1_3:72942719-72942738 Msa0139300:intron 35.0%
ATATTTGAATCACCGTTGGT+AGG + chr1_3:72942960-72942979 Msa0139300:intron 35.0%
CAGAAAAATGAACCTACCAA+CGG - chr1_3:72942975-72942994 None:intergenic 35.0%
!! TTCACTTTTATGTTTGCAGG+TGG + chr1_3:72943184-72943203 Msa0139300:intron 35.0%
GTGCAATATGTCAAGATGTA+TGG + chr1_3:72943236-72943255 Msa0139300:CDS 35.0%
ATGCAGTGCATGTTACAAAA+AGG - chr1_3:72943302-72943321 None:intergenic 35.0%
CTGTATAAATGCCTAAACAG+AGG - chr1_3:72943532-72943551 None:intergenic 35.0%
TTAGGCATTTATACAGAACC+TGG + chr1_3:72943536-72943555 Msa0139300:intron 35.0%
! TGCATTATTGGGTTGTTGTT+GGG + chr1_3:72943738-72943757 Msa0139300:intron 35.0%
TGATAGCCTTCTATTAATGC+AGG + chr1_3:72943787-72943806 Msa0139300:intron 35.0%
TGTGAACCTGCATTAATAGA+AGG - chr1_3:72943796-72943815 None:intergenic 35.0%
! TCAATCTGACTATTTAGAGC+AGG - chr1_3:72943953-72943972 None:intergenic 35.0%
AGTCAGATTGATACTGTATC+TGG + chr1_3:72943962-72943981 Msa0139300:intron 35.0%
TGGCATTCTTGTGAACATTA+AGG - chr1_3:72944248-72944267 None:intergenic 35.0%
ATAGCATGAAGATATGTGGT+AGG - chr1_3:72944476-72944495 None:intergenic 35.0%
TTAATCGAGTAAGCAGGTAT+CGG + chr1_3:72944697-72944716 Msa0139300:intron 35.0%
AGCATTCTCAACTTTGACAT+GGG - chr1_3:72944791-72944810 None:intergenic 35.0%
AAGCATTCTCAACTTTGACA+TGG - chr1_3:72944792-72944811 None:intergenic 35.0%
AATGCTTATGATCTGTCGAA+TGG + chr1_3:72944805-72944824 Msa0139300:CDS 35.0%
TTCAACTATGAGAACCTCTT+CGG - chr1_3:72944837-72944856 None:intergenic 35.0%
AAGAACATCATTGTCCTTCA+AGG - chr1_3:72944888-72944907 None:intergenic 35.0%
! AACAAAAGAGCAGTGTTTTC+TGG - chr1_3:72945162-72945181 None:intergenic 35.0%
! TGGTGTTAATGACCTAATGT+TGG + chr1_3:72945350-72945369 Msa0139300:intron 35.0%
AGGTTATTCACTCCAACATT+AGG - chr1_3:72945365-72945384 None:intergenic 35.0%
! GTAGAGTGTTATGATGCAAA+AGG + chr1_3:72945429-72945448 Msa0139300:intron 35.0%
GAGTGTATTCAAATTGTTCC+AGG - chr1_3:72945557-72945576 None:intergenic 35.0%
ACAATTTGAATACACTCTGC+TGG + chr1_3:72945560-72945579 Msa0139300:CDS 35.0%
CAATTTGAATACACTCTGCT+GGG + chr1_3:72945561-72945580 Msa0139300:CDS 35.0%
GTCAATCAAGCAATACCATA+TGG - chr1_3:72945635-72945654 None:intergenic 35.0%
! GTTGAGGTATTTCCACTATT+TGG + chr1_3:72945951-72945970 Msa0139300:intron 35.0%
!! ATGCATGCATGGCTTTATAT+TGG + chr1_3:72946157-72946176 Msa0139300:intron 35.0%
!! ATACTTCCTTGATTTGTGAC+AGG + chr1_3:72946321-72946340 Msa0139300:intron 35.0%
! TGTTTTCCTGTCACAAATCA+AGG - chr1_3:72946330-72946349 None:intergenic 35.0%
! GTGACAGGAAAACAGATTTT+TGG + chr1_3:72946336-72946355 Msa0139300:intron 35.0%
CAATGAGCTCTTAAAAATCG+GGG - chr1_3:72946548-72946567 None:intergenic 35.0%
CCAATGAGCTCTTAAAAATC+GGG - chr1_3:72946549-72946568 None:intergenic 35.0%
TAAAAAACAACCTGAACTCC+AGG - chr1_3:72946626-72946645 None:intergenic 35.0%
ATAGGTGCTTAAATTAGAGG+CGG - chr1_3:72946990-72947009 None:intergenic 35.0%
TTTCCTCATTAGACTTCTGA+AGG + chr1_3:72947240-72947259 Msa0139300:intron 35.0%
TTCCTCATTAGACTTCTGAA+GGG + chr1_3:72947241-72947260 Msa0139300:intron 35.0%
AAACACTGAAGTCTAGCATA+TGG + chr1_3:72947454-72947473 Msa0139300:intron 35.0%
AGAACCATGCAGATATTACA+AGG - chr1_3:72947511-72947530 None:intergenic 35.0%
AATTATGGCCCTTATTACCT+GGG - chr1_3:72947688-72947707 None:intergenic 35.0%
AAATTATGGCCCTTATTACC+TGG - chr1_3:72947689-72947708 None:intergenic 35.0%
TAGGAAAAGGGAGGAAATTA+TGG - chr1_3:72947703-72947722 None:intergenic 35.0%
GAATTCAAGAGGATAGGAAA+AGG - chr1_3:72947716-72947735 None:intergenic 35.0%
CAACCTGAAATAGCAATTGT+GGG - chr1_3:72947762-72947781 None:intergenic 35.0%
TCAAGATCTGCAATAGTGAT+TGG - chr1_3:72947826-72947845 None:intergenic 35.0%
AGAGAGATGAATTTCTTCAG+CGG + chr1_3:72948024-72948043 Msa0139300:CDS 35.0%
AATTTCCATCCATTTCTGCA+GGG - chr1_3:72948191-72948210 None:intergenic 35.0%
TAATTTCCATCCATTTCTGC+AGG - chr1_3:72948192-72948211 None:intergenic 35.0%
!! AATCAACATTTTGATGTGCC+TGG - chr1_3:72948219-72948238 None:intergenic 35.0%
GACTGTGCTTAATATATTGC+AGG + chr1_3:72948264-72948283 Msa0139300:CDS 35.0%
!! TTACCATTGTTGACTTGTTC+GGG + chr1_3:72948432-72948451 Msa0139300:intron 35.0%
GTTGGTCATAAGCATGTAAA+AGG + chr1_3:72948507-72948526 Msa0139300:intron 35.0%
TTAAACTCCAAACAAGGAGA+AGG - chr1_3:72948543-72948562 None:intergenic 35.0%
!!! ACAGCCTCTGATTTTTTTGT+TGG + chr1_3:72948636-72948655 Msa0139300:intron 35.0%
! ACAAGTGTTGCATCTTCTTT+AGG + chr1_3:72948781-72948800 Msa0139300:CDS 35.0%
! CAAGTGTTGCATCTTCTTTA+GGG + chr1_3:72948782-72948801 Msa0139300:CDS 35.0%
GAACATAAGCATGTAGAATG+CGG - chr1_3:72949408-72949427 None:intergenic 35.0%
! TTATGTTCTGCTACTTCCTA+AGG + chr1_3:72949420-72949439 Msa0139300:intron 35.0%
! TATGTTCTGCTACTTCCTAA+GGG + chr1_3:72949421-72949440 Msa0139300:intron 35.0%
TTATATCTGGAAGTAAGAGG+GGG - chr1_3:72949484-72949503 None:intergenic 35.0%
GCTTTATATCTGGAAGTAAG+AGG - chr1_3:72949487-72949506 None:intergenic 35.0%
CTCTAATGTGCACTGAAAAA+CGG - chr1_3:72949545-72949564 None:intergenic 35.0%
! TTGTTGTTGTTGTTGTTACG+TGG + chr1_3:72949607-72949626 Msa0139300:intron 35.0%
AGGAAAACAATGAGTAGCTA+TGG - chr1_3:72949999-72950018 None:intergenic 35.0%
AGAAAGCAAGAAACAAAACC+TGG - chr1_3:72950042-72950061 None:intergenic 35.0%
!! ACACTGTTGATTCATGGAAA+AGG - chr1_3:72950065-72950084 None:intergenic 35.0%
!! ACTGAAACACTGTTGATTCA+TGG - chr1_3:72950071-72950090 None:intergenic 35.0%
TGCAGTTAACATCTCATACA+CGG - chr1_3:72950098-72950117 None:intergenic 35.0%
!! TCAGCAATTGAAGCTTGTTA+TGG + chr1_3:72950177-72950196 Msa0139300:CDS 35.0%
ATTCAATCATGTGGGCATTT+CGG + chr1_3:72950200-72950219 Msa0139300:CDS 35.0%
GAAAGGAATATTGCTGAAAC+AGG + chr1_3:72950229-72950248 Msa0139300:CDS 35.0%
AGTTCTGTAATCAGTTCTAC+AGG + chr1_3:72950514-72950533 Msa0139300:CDS 35.0%
CGAACAAAAACTGCATTACT+TGG - chr1_3:72950793-72950812 None:intergenic 35.0%
!! CAGGTTACCCAATTTGTTAA+TGG + chr1_3:72950938-72950957 Msa0139300:intron 35.0%
GTATCAGGAAATCTCGTATA+TGG - chr1_3:72951003-72951022 None:intergenic 35.0%
! GTCAAAAGAATTTTCAGCTC+AGG + chr1_3:72951024-72951043 Msa0139300:CDS 35.0%
! CCAGATTTGCGAAGTATTAT+GGG - chr1_3:72951293-72951312 None:intergenic 35.0%
! ACCAGATTTGCGAAGTATTA+TGG - chr1_3:72951294-72951313 None:intergenic 35.0%
! CATAGAGATCTTTGTTATCC+TGG - chr1_3:72951367-72951386 None:intergenic 35.0%
CAAAGAATGCTTTCTATTCC+AGG + chr1_3:72951422-72951441 Msa0139300:CDS 35.0%
TTTCATCTTGCAACTCGATA+GGG - chr1_3:72951457-72951476 None:intergenic 35.0%
ATTTCATCTTGCAACTCGAT+AGG - chr1_3:72951458-72951477 None:intergenic 35.0%
! TATCGAGTTGCAAGATGAAA+TGG + chr1_3:72951457-72951476 Msa0139300:CDS 35.0%
! TTTTAATACCGTGGGCATTT+TGG + chr1_3:72951516-72951535 Msa0139300:intron 35.0%
AATAATCTACACTCACCACA+TGG - chr1_3:72951714-72951733 None:intergenic 35.0%
ACAAAAATGGAAGACTCCTT+CGG + chr1_3:72951798-72951817 Msa0139300:three_prime_UTR 35.0%
AACCATATAGTAAGTGCTCT+CGG - chr1_3:72951937-72951956 None:intergenic 35.0%
! CTAGAGATTTGAAGCTAGAA+AGG - chr1_3:72952038-72952057 None:intergenic 35.0%
AGTGAGTTTGAAAGAAGAGG+GGG - chr1_3:72939428-72939447 None:intergenic 40.0%
GAGTGAGTTTGAAAGAAGAG+GGG - chr1_3:72939429-72939448 None:intergenic 40.0%
GTGAGTGAGTTTGAAAGAAG+AGG - chr1_3:72939431-72939450 None:intergenic 40.0%
TCTAGAGAGAGAGAGATTTC+GGG - chr1_3:72939571-72939590 None:intergenic 40.0%
TTGGAAATCGTGTAGATTGC+AGG - chr1_3:72939928-72939947 None:intergenic 40.0%
ATGACTTGAAGCCACATATC+AGG - chr1_3:72940139-72940158 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG + chr1_3:72940551-72940570 Msa0139300:intron 40.0%
GTCTATCCAACAAAGCAATG+TGG - chr1_3:72940598-72940617 None:intergenic 40.0%
! CAAATCAGTATTGAGTCGAC+GGG - chr1_3:72940620-72940639 None:intergenic 40.0%
! CCAAATCAGTATTGAGTCGA+CGG - chr1_3:72940621-72940640 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG + chr1_3:72940551-72940570 Msa0139300:intron 40.0%
GTCTATCCAACAAAGCTATG+TGG - chr1_3:72940706-72940725 None:intergenic 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG + chr1_3:72940551-72940570 Msa0139300:intron 40.0%
TTCTTTCCACATCGCTTTGT+TGG + chr1_3:72940805-72940824 Msa0139300:intron 40.0%
ATCTATCCAACAAAGCGATG+TGG - chr1_3:72940814-72940833 None:intergenic 40.0%
!! AGATCCGTTGACTCGATATT+TGG + chr1_3:72940830-72940849 Msa0139300:intron 40.0%
! CTGAAATTTCCTTTAGAGGC+TGG + chr1_3:72940551-72940570 Msa0139300:intron 40.0%
TTCTTTCCACATCGCTTTGT+TGG + chr1_3:72940805-72940824 Msa0139300:intron 40.0%
!! CCGTTGACTCAATACTCATT+TGG + chr1_3:72940939-72940958 Msa0139300:intron 40.0%
CAATAGTAAGTAGGATGCAG+AGG - chr1_3:72941007-72941026 None:intergenic 40.0%
CTCTGCATCCTACTTACTAT+TGG + chr1_3:72941005-72941024 Msa0139300:intron 40.0%
GCAAAGGTCCAATAGTAAGT+AGG - chr1_3:72941016-72941035 None:intergenic 40.0%
TACTATTGGACCTTTGCCTT+CGG + chr1_3:72941019-72941038 Msa0139300:intron 40.0%
! TCAATAAGCGTTGTTTCCGA+AGG - chr1_3:72941038-72941057 None:intergenic 40.0%
TCTTTCACTCAGGTTCTTGA+AGG + chr1_3:72941138-72941157 Msa0139300:intron 40.0%
AGCAGTTATATGTGCTAGTC+AGG + chr1_3:72941264-72941283 Msa0139300:intron 40.0%
TACATCCTGGATCTCATTGT+TGG + chr1_3:72941324-72941343 Msa0139300:intron 40.0%
AACGATCTGTGAGAATTGCA+TGG + chr1_3:72941649-72941668 Msa0139300:CDS 40.0%
GTGGTGATAACTGCATATCT+AGG + chr1_3:72942017-72942036 Msa0139300:intron 40.0%
GTGATAACTGCATATCTAGG+TGG + chr1_3:72942020-72942039 Msa0139300:intron 40.0%
! AGGTGGCTAGTTAGAACAAT+TGG + chr1_3:72942037-72942056 Msa0139300:intron 40.0%
GTATGGCTTTCGATGTGATT+TGG + chr1_3:72942101-72942120 Msa0139300:intron 40.0%
CATTGCATGCCTTCTTATCA+TGG + chr1_3:72942922-72942941 Msa0139300:CDS 40.0%
TTCTTATCATGGATCCCCTT+GGG + chr1_3:72942933-72942952 Msa0139300:CDS 40.0%
CTGGAACTGGGAAAAACTTT+AGG - chr1_3:72943075-72943094 None:intergenic 40.0%
GATTTCGATATGCTGGAACT+GGG - chr1_3:72943087-72943106 None:intergenic 40.0%
AGATTTCGATATGCTGGAAC+TGG - chr1_3:72943088-72943107 None:intergenic 40.0%
AGCGTAAGATTTCGATATGC+TGG - chr1_3:72943094-72943113 None:intergenic 40.0%
TACGCTGCAATGTTTAACAG+AGG + chr1_3:72943108-72943127 Msa0139300:CDS 40.0%
TATATTCATGGGCCAATTGC+AGG + chr1_3:72943259-72943278 Msa0139300:CDS 40.0%
CTAAACAGAGGGAAAAACCA+CGG - chr1_3:72943520-72943539 None:intergenic 40.0%
CAACAACAACCCAATAATGC+AGG - chr1_3:72943739-72943758 None:intergenic 40.0%
! CTGCATTATTGGGTTGTTGT+TGG + chr1_3:72943737-72943756 Msa0139300:intron 40.0%
! TATTCTCTTGAGTGGATTCC+AGG - chr1_3:72943826-72943845 None:intergenic 40.0%
AGGTATGTGCATACTGCATT+TGG + chr1_3:72943915-72943934 Msa0139300:intron 40.0%
GGTATGTGCATACTGCATTT+GGG + chr1_3:72943916-72943935 Msa0139300:intron 40.0%
! CTATTTAGAGCAGGAGAAAG+TGG - chr1_3:72943944-72943963 None:intergenic 40.0%
AATAGGTCTGTTTGGACTAC+TGG + chr1_3:72943997-72944016 Msa0139300:intron 40.0%
TTTGGACTACTGGAATTCCT+TGG + chr1_3:72944007-72944026 Msa0139300:CDS 40.0%
GGATTATCCAAACTTCGATG+TGG - chr1_3:72944050-72944069 None:intergenic 40.0%
GCAAAACTTAGAGACTAGGA+TGG - chr1_3:72944374-72944393 None:intergenic 40.0%
TCAACTATGAGAACCTCTTC+GGG - chr1_3:72944836-72944855 None:intergenic 40.0%
TATTGTCCGTGAAACCTTGA+AGG + chr1_3:72944871-72944890 Msa0139300:CDS 40.0%
CATTGTCCTTCAAGGTTTCA+CGG - chr1_3:72944880-72944899 None:intergenic 40.0%
! GAGGGAGACTCTTATTTACT+TGG + chr1_3:72945095-72945114 Msa0139300:CDS 40.0%
!! CCTGCTTTTCAGTATCATCA+TGG - chr1_3:72945131-72945150 None:intergenic 40.0%
CCATGATGATACTGAAAAGC+AGG + chr1_3:72945128-72945147 Msa0139300:CDS 40.0%
!!! ACACTGCTCTTTTGTTTTGC+TGG + chr1_3:72945166-72945185 Msa0139300:intron 40.0%
AAGTAAACAACTCAGTGGTG+AGG + chr1_3:72945525-72945544 Msa0139300:CDS 40.0%
TGGGCAATTGGATCTATATC+TGG + chr1_3:72945580-72945599 Msa0139300:CDS 40.0%
! AGCAGGTACTGTAAACCATA+TGG + chr1_3:72945617-72945636 Msa0139300:intron 40.0%
CTTTATATCCCTACATGCAC+AGG + chr1_3:72945654-72945673 Msa0139300:intron 40.0%
GAAAATGACCTGTGCATGTA+GGG - chr1_3:72945665-72945684 None:intergenic 40.0%
TGAAAATGACCTGTGCATGT+AGG - chr1_3:72945666-72945685 None:intergenic 40.0%
! GTAGAGCTTTTGATCTGTTG+AGG + chr1_3:72945935-72945954 Msa0139300:intron 40.0%
CTAATCTCTCTATGCATGCA+TGG + chr1_3:72946146-72946165 Msa0139300:intron 40.0%
TCGCTTGATAGGTATGTTGT+TGG + chr1_3:72946515-72946534 Msa0139300:intron 40.0%
CTCTTAAAAATCGGGGATAC+TGG - chr1_3:72946541-72946560 None:intergenic 40.0%
!! CCCGATTTTTAAGAGCTCAT+TGG + chr1_3:72946546-72946565 Msa0139300:CDS 40.0%
TTTATGCATGAGACACATCC+TGG + chr1_3:72946605-72946624 Msa0139300:CDS 40.0%
CAAGAAAATCAACCCAGCTA+TGG - chr1_3:72946745-72946764 None:intergenic 40.0%
GCAAGGTTTGGCTATAACTA+CGG + chr1_3:72947355-72947374 Msa0139300:intron 40.0%
CTGAAGTCTAGCATATGGTT+TGG + chr1_3:72947459-72947478 Msa0139300:intron 40.0%
! AAGTCTAGCATATGGTTTGG+TGG + chr1_3:72947462-72947481 Msa0139300:intron 40.0%
TTGTGATCACCCAGGTAATA+AGG + chr1_3:72947676-72947695 Msa0139300:intron 40.0%
TGTGATCACCCAGGTAATAA+GGG + chr1_3:72947677-72947696 Msa0139300:intron 40.0%
!! TGTCCCACAATTGCTATTTC+AGG + chr1_3:72947756-72947775 Msa0139300:intron 40.0%
CCAACCTGAAATAGCAATTG+TGG - chr1_3:72947763-72947782 None:intergenic 40.0%
!! CCACAATTGCTATTTCAGGT+TGG + chr1_3:72947760-72947779 Msa0139300:intron 40.0%
GATCTGCAATAGTGATTGGA+AGG - chr1_3:72947822-72947841 None:intergenic 40.0%
! TAGAAGGAGTGTATCTGATG+GGG - chr1_3:72947850-72947869 None:intergenic 40.0%
! GTAGAAGGAGTGTATCTGAT+GGG - chr1_3:72947851-72947870 None:intergenic 40.0%
AAGGCATACAGATTCGTAGA+AGG - chr1_3:72947866-72947885 None:intergenic 40.0%
TGAATTTCTTCAGCGGTTGA+TGG + chr1_3:72948031-72948050 Msa0139300:CDS 40.0%
GCAAGCAAAAGACCTGATTT+GGG - chr1_3:72948061-72948080 None:intergenic 40.0%
AGCAAGCAAAAGACCTGATT+TGG - chr1_3:72948062-72948081 None:intergenic 40.0%
ATTTCCATCCATTTCTGCAG+GGG - chr1_3:72948190-72948209 None:intergenic 40.0%
ATGGATGGAAATTATAGGCC+AGG + chr1_3:72948198-72948217 Msa0139300:CDS 40.0%
GACAAATCAGTTGCTGATGT+TGG + chr1_3:72948390-72948409 Msa0139300:intron 40.0%
ATTCCCGAACAAGTCAACAA+TGG - chr1_3:72948438-72948457 None:intergenic 40.0%
! AGATCATTGTGATTTGAGGC+AGG - chr1_3:72948816-72948835 None:intergenic 40.0%
TGGACATGTTGAATGTGTAC+AGG + chr1_3:72948839-72948858 Msa0139300:CDS 40.0%
GATCGAGACATTCTTGGATA+AGG + chr1_3:72949179-72949198 Msa0139300:CDS 40.0%
ACAATTTGTGCCACCAATGA+TGG + chr1_3:72949227-72949246 Msa0139300:CDS 40.0%
TCAAAGCAGCATATCAACCA+AGG - chr1_3:72949382-72949401 None:intergenic 40.0%
AAAACGGCTTCAAATATGCG+AGG - chr1_3:72949529-72949548 None:intergenic 40.0%
!! CGTTTTTCAGTGCACATTAG+AGG + chr1_3:72949543-72949562 Msa0139300:CDS 40.0%
GAAGAGAGAAGAACTTAAGC+CGG - chr1_3:72949970-72949989 None:intergenic 40.0%
! GTTTTTGTGCTCCTAACCTT+GGG + chr1_3:72950294-72950313 Msa0139300:intron 40.0%
CAGAAACAAAACCCAAGGTT+AGG - chr1_3:72950308-72950327 None:intergenic 40.0%
GTATGCAGAAACAAAACCCA+AGG - chr1_3:72950313-72950332 None:intergenic 40.0%
! ACCGATACTTTTCATAAGCC+TGG + chr1_3:72950579-72950598 Msa0139300:CDS 40.0%
! CCCAGGCTTATGAAAAGTAT+CGG - chr1_3:72950583-72950602 None:intergenic 40.0%
! CCGATACTTTTCATAAGCCT+GGG + chr1_3:72950580-72950599 Msa0139300:CDS 40.0%
AGGACATGTAATTTGAACCC+AGG - chr1_3:72950600-72950619 None:intergenic 40.0%
TGGGTTCAAATTACATGTCC+TGG + chr1_3:72950599-72950618 Msa0139300:CDS 40.0%
! AAAACAAATGCTGAAGCACC+AGG - chr1_3:72950620-72950639 None:intergenic 40.0%
!!! GCTTCAGCATTTGTTTTGTC+TGG + chr1_3:72950623-72950642 Msa0139300:CDS 40.0%
!! AATTGGTTTGACCTTTCAGC+TGG + chr1_3:72950711-72950730 Msa0139300:intron 40.0%
ACTTGTAGCAACATCCCAAA+GGG - chr1_3:72950758-72950777 None:intergenic 40.0%
AGTCAGTTGTTCTAGCAAGA+GGG - chr1_3:72950903-72950922 None:intergenic 40.0%
TAGTCAGTTGTTCTAGCAAG+AGG - chr1_3:72950904-72950923 None:intergenic 40.0%
! CGAAGTATTATGGGAAGCAA+AGG - chr1_3:72951284-72951303 None:intergenic 40.0%
CCCATAATACTTCGCAAATC+TGG + chr1_3:72951290-72951309 Msa0139300:intron 40.0%
TTTGTCATCTTCTGTACTCC+AGG + chr1_3:72951346-72951365 Msa0139300:intron 40.0%
CAAAGATCTCTATGCTGAAG+AGG + chr1_3:72951373-72951392 Msa0139300:CDS 40.0%
TTCATCTTGCAACTCGATAG+GGG - chr1_3:72951456-72951475 None:intergenic 40.0%
!! AGATGAAATGGTGGACTCAT+AGG + chr1_3:72951469-72951488 Msa0139300:CDS 40.0%
GAAAAACACCAAAATGCCCA+CGG - chr1_3:72951527-72951546 None:intergenic 40.0%
!!! GGCATTTTGGTGTTTTTCAC+AGG + chr1_3:72951529-72951548 Msa0139300:intron 40.0%
! ACTCTGAAAATCAGGAACCA+TGG - chr1_3:72951663-72951682 None:intergenic 40.0%
!!! TTTCAGAGTTTTAGCTAGCC+AGG + chr1_3:72951674-72951693 Msa0139300:intron 40.0%
!!! TTCAGAGTTTTAGCTAGCCA+GGG + chr1_3:72951675-72951694 Msa0139300:intron 40.0%
TTTAGGTGTGACCTAACTTC+TGG + chr1_3:72951835-72951854 Msa0139300:three_prime_UTR 40.0%
!! TACCGAGAGCACTTACTATA+TGG + chr1_3:72951932-72951951 Msa0139300:three_prime_UTR 40.0%
ACTCGCACGGAATGAAGAAA+AGG - chr1_3:72939395-72939414 None:intergenic 45.0%
GTGAGTTTGAAAGAAGAGGG+GGG - chr1_3:72939427-72939446 None:intergenic 45.0%
CTAGAGAGAGAGAGATTTCG+GGG - chr1_3:72939570-72939589 None:intergenic 45.0%
ACAAAAACCCTAGACTCGCT+CGG - chr1_3:72939601-72939620 None:intergenic 45.0%
ATTCACTCTACTCTCGCTCT+AGG + chr1_3:72939629-72939648 Msa0139300:five_prime_UTR 45.0%
TTCACTCTACTCTCGCTCTA+GGG + chr1_3:72939630-72939649 Msa0139300:five_prime_UTR 45.0%
TCACTCTTCTTCTTCTCCGA+TGG + chr1_3:72939658-72939677 Msa0139300:exon 45.0%
CAAATCTCTGAGCTTCTCAG+CGG - chr1_3:72939684-72939703 None:intergenic 45.0%
! TCGAGTAACGGAACATCGAT+CGG - chr1_3:72939713-72939732 None:intergenic 45.0%
GCGACATTGTTGAAGAGAGA+GGG - chr1_3:72939796-72939815 None:intergenic 45.0%
AGCGACATTGTTGAAGAGAG+AGG - chr1_3:72939797-72939816 None:intergenic 45.0%
!!! GTGCTGCTGATTCGATTTTG+CGG + chr1_3:72940098-72940117 Msa0139300:CDS 45.0%
!!! TGCTGCTGATTCGATTTTGC+GGG + chr1_3:72940099-72940118 Msa0139300:CDS 45.0%
!! CTATCGGCATTGACTATGCA+TGG - chr1_3:72940308-72940327 None:intergenic 45.0%
ATGATCAAGATGTGCACGCT+AGG + chr1_3:72940374-72940393 Msa0139300:intron 45.0%
!! CCGTCGACTCAATACTGATT+TGG + chr1_3:72940618-72940637 Msa0139300:intron 45.0%
GTCTATCCAACAAAGCGATG+TGG - chr1_3:72940919-72940938 None:intergenic 45.0%
TTTCATTCCATCTCGCTGCT+CGG - chr1_3:72941196-72941215 None:intergenic 45.0%
CATCTCCGACATCATTGTTC+AGG + chr1_3:72941221-72941240 Msa0139300:CDS 45.0%
! TGCATAGCTTTCTAGCAACG+AGG + chr1_3:72941354-72941373 Msa0139300:intron 45.0%
CAACCTTTCCGTTCGAAATG+AGG - chr1_3:72941380-72941399 None:intergenic 45.0%
ATAAAGCTTCGCCATCTTGC+TGG - chr1_3:72941596-72941615 None:intergenic 45.0%
TATTCCTGATCTTGTCGCAG+CGG + chr1_3:72941613-72941632 Msa0139300:CDS 45.0%
! TGTTCAGCTTTTGAGCGAAG+AGG + chr1_3:72941747-72941766 Msa0139300:intron 45.0%
TTATCGCCTCGAAGTTAGAC+TGG + chr1_3:72942133-72942152 Msa0139300:intron 45.0%
TATCGCCTCGAAGTTAGACT+GGG + chr1_3:72942134-72942153 Msa0139300:intron 45.0%
AGTCAGAGATGTGCAGGAAA+AGG - chr1_3:72942495-72942514 None:intergenic 45.0%
GCACAATAGCTTAGGCTTTC+AGG - chr1_3:72942666-72942685 None:intergenic 45.0%
GGCATGCAATGTAGATAGTG+TGG - chr1_3:72942913-72942932 None:intergenic 45.0%
CAAGGGGATCCATGATAAGA+AGG - chr1_3:72942934-72942953 None:intergenic 45.0%
CTTCTTATCATGGATCCCCT+TGG + chr1_3:72942932-72942951 Msa0139300:CDS 45.0%
!! TTTAGGAGTGTCTCAAGCTG+TGG - chr1_3:72943058-72943077 None:intergenic 45.0%
AGGTGGCATCCCTTCAATTT+GGG + chr1_3:72943201-72943220 Msa0139300:intron 45.0%
GATCCAAACACACCTGCAAT+TGG - chr1_3:72943274-72943293 None:intergenic 45.0%
TATTGTGTTAGGCGGCAGTA+TGG - chr1_3:72943398-72943417 None:intergenic 45.0%
ATTGCCATGTGCATATGCCT+CGG - chr1_3:72943424-72943443 None:intergenic 45.0%
!! GTTAAGTATCGGTCTTACCG+TGG + chr1_3:72943500-72943519 Msa0139300:intron 45.0%
! CGTGGTTTTTCCCTCTGTTT+AGG + chr1_3:72943518-72943537 Msa0139300:intron 45.0%
GTTAGAATGTGGCATTGCTG+AGG + chr1_3:72943656-72943675 Msa0139300:intron 45.0%
! CTACTGGAATTCCTTGGTGT+CGG + chr1_3:72944013-72944032 Msa0139300:CDS 45.0%
GTTTGAGCCACATCGAAGTT+TGG + chr1_3:72944040-72944059 Msa0139300:CDS 45.0%
TTAAGTGCATGGCGAGATAC+AGG + chr1_3:72944520-72944539 Msa0139300:intron 45.0%
ATGCTTCCTGGTATGGTTGA+TGG + chr1_3:72944722-72944741 Msa0139300:CDS 45.0%
TGCTTCCTGGTATGGTTGAT+GGG + chr1_3:72944723-72944742 Msa0139300:CDS 45.0%
AACAACTCAGTGGTGAGGAT+TGG + chr1_3:72945530-72945549 Msa0139300:CDS 45.0%
AATACACTCTGCTGGGCAAT+TGG + chr1_3:72945568-72945587 Msa0139300:CDS 45.0%
TGGTTCCATGATAGAAGAGC+AGG + chr1_3:72945600-72945619 Msa0139300:CDS 45.0%
CAGTACCTGCTCTTCTATCA+TGG - chr1_3:72945608-72945627 None:intergenic 45.0%
ACAGCAGGATACCCAAATAG+TGG - chr1_3:72945966-72945985 None:intergenic 45.0%
! GATGGCATTGGAGTATACCT+TGG + chr1_3:72946043-72946062 Msa0139300:intron 45.0%
ATCCAGTTGCTTCGCTTGAT+AGG + chr1_3:72946504-72946523 Msa0139300:intron 45.0%
TACCTATCAAGCGAAGCAAC+TGG - chr1_3:72946509-72946528 None:intergenic 45.0%
GTGCTTAAATTAGAGGCGGA+GGG - chr1_3:72946986-72947005 None:intergenic 45.0%
TGCCCTTCAGAAGTCTAATG+AGG - chr1_3:72947246-72947265 None:intergenic 45.0%
TTGGCTATAACTACGGACGT+AGG + chr1_3:72947362-72947381 Msa0139300:intron 45.0%
TGGCTATAACTACGGACGTA+GGG + chr1_3:72947363-72947382 Msa0139300:intron 45.0%
TCAAGAGGATAGGAAAAGGG+AGG - chr1_3:72947712-72947731 None:intergenic 45.0%
! CGTAGAAGGAGTGTATCTGA+TGG - chr1_3:72947852-72947871 None:intergenic 45.0%
!!! TTTTTTCCCCCCTGCAGAAA+TGG + chr1_3:72948179-72948198 Msa0139300:intron 45.0%
TTTCCATCCATTTCTGCAGG+GGG - chr1_3:72948189-72948208 None:intergenic 45.0%
AGAGATGCCTTCTCCTTGTT+TGG + chr1_3:72948533-72948552 Msa0139300:intron 45.0%
CAGAGGCTGTGACTGAATAA+AGG - chr1_3:72948626-72948645 None:intergenic 45.0%
TGTATTCGTCTGCAGTCAAG+AGG - chr1_3:72948764-72948783 None:intergenic 45.0%
TTCGATGCAGTTCGGTTAAG+AGG + chr1_3:72949142-72949161 Msa0139300:intron 45.0%
TCGATGCAGTTCGGTTAAGA+GGG + chr1_3:72949143-72949162 Msa0139300:intron 45.0%
GCTGAAGATCAACCACAGAT+TGG + chr1_3:72949201-72949220 Msa0139300:CDS 45.0%
AGAACAGGATCCATCATTGG+TGG - chr1_3:72949240-72949259 None:intergenic 45.0%
!! ACCAATGATGGATCCTGTTC+TGG + chr1_3:72949239-72949258 Msa0139300:CDS 45.0%
!! CCAATGATGGATCCTGTTCT+GGG + chr1_3:72949240-72949259 Msa0139300:CDS 45.0%
CTAGCATAATCTCCCAGAAC+AGG - chr1_3:72949255-72949274 None:intergenic 45.0%
!! CTGTTCTGGGAGATTATGCT+AGG + chr1_3:72949253-72949272 Msa0139300:CDS 45.0%
TAGGAATGCTCCTGATGCAA+GGG + chr1_3:72949272-72949291 Msa0139300:CDS 45.0%
GAGGTGGATATCAAACGCAA+GGG - chr1_3:72949639-72949658 None:intergenic 45.0%
CTTGCGTTTGATATCCACCT+CGG + chr1_3:72949638-72949657 Msa0139300:intron 45.0%
!! AAAGGGAATAGTGGATTCCG+AGG - chr1_3:72949658-72949677 None:intergenic 45.0%
TTGAAGATTACCCTGAGCAC+CGG + chr1_3:72949948-72949967 Msa0139300:CDS 45.0%
AACAATGAGTAGCTATGGCG+CGG - chr1_3:72949994-72950013 None:intergenic 45.0%
CTTGACAAACAGATCAGTGC+AGG - chr1_3:72950019-72950038 None:intergenic 45.0%
ACTGATCTGTTTGTCAAGCC+AGG + chr1_3:72950021-72950040 Msa0139300:CDS 45.0%
TCTTCAGCATCTCCAACAAC+AGG - chr1_3:72950261-72950280 None:intergenic 45.0%
GGAGATGCTGAAGAAGTTTC+AGG + chr1_3:72950267-72950286 Msa0139300:CDS 45.0%
! TGCTGAAGAAGTTTCAGGTG+TGG + chr1_3:72950272-72950291 Msa0139300:intron 45.0%
! GGTTTTTGTGCTCCTAACCT+TGG + chr1_3:72950293-72950312 Msa0139300:intron 45.0%
TTGACCTTTCAGCTGGAAAC+TGG + chr1_3:72950718-72950737 Msa0139300:intron 45.0%
CTTGTAGCAACATCCCAAAG+GGG - chr1_3:72950757-72950776 None:intergenic 45.0%
GACTTGTAGCAACATCCCAA+AGG - chr1_3:72950759-72950778 None:intergenic 45.0%
GCATTACTTGGGTATGACTG+TGG - chr1_3:72950781-72950800 None:intergenic 45.0%
ACCTCAGCTGTTGTCATGTT+CGG - chr1_3:72950850-72950869 None:intergenic 45.0%
CGAGTTGCAAGATGAAATGG+TGG + chr1_3:72951460-72951479 Msa0139300:CDS 45.0%
!! GAAATGGTGGACTCATAGGT+AGG + chr1_3:72951473-72951492 Msa0139300:intron 45.0%
!!! TCAGAGTTTTAGCTAGCCAG+GGG + chr1_3:72951676-72951695 Msa0139300:intron 45.0%
ATGGACAAGTCTATATCCCC+TGG - chr1_3:72951695-72951714 None:intergenic 45.0%
GGGATATAGACTTGTCCATG+TGG + chr1_3:72951696-72951715 Msa0139300:three_prime_UTR 45.0%
AAGAGTCATCATCACTCCGA+AGG - chr1_3:72951817-72951836 None:intergenic 45.0%
! CGGAGTGATGATGACTCTTT+AGG + chr1_3:72951818-72951837 Msa0139300:three_prime_UTR 45.0%
GTTTGTGCAGAAAACCCTTG+TGG + chr1_3:72951860-72951879 Msa0139300:three_prime_UTR 45.0%
TCCTCTCTATTTGGAGGGAT+GGG - chr1_3:72951990-72952009 None:intergenic 45.0%
ATCCTCTCTATTTGGAGGGA+TGG - chr1_3:72951991-72952010 None:intergenic 45.0%
! TAGCTGGTCTGAGTGCTAAT+TGG - chr1_3:72952106-72952125 None:intergenic 45.0%
!!! TATTTTTATTCATTTTATTT+TGG + chr1_3:72943325-72943344 Msa0139300:intron 5.0%
!! AATTAATTTAGTATAAATAT+TGG - chr1_3:72944557-72944576 None:intergenic 5.0%
!! TTTATACTAAATTAATTAAT+TGG + chr1_3:72944560-72944579 Msa0139300:intron 5.0%
TTCGGGGAGAGAGAAGAGTT+CGG - chr1_3:72939554-72939573 None:intergenic 50.0%
CTTAGATCCAGTGCCGTAGA+AGG - chr1_3:72939750-72939769 None:intergenic 50.0%
TCAAGATGTGCACGCTAGGT+TGG + chr1_3:72940378-72940397 Msa0139300:intron 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG - chr1_3:72940563-72940582 None:intergenic 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG - chr1_3:72940563-72940582 None:intergenic 50.0%
TGTCGTAAGCCAGCCTCTAA+AGG - chr1_3:72940563-72940582 None:intergenic 50.0%
! AGCGTTGTTTCCGAAGGCAA+AGG - chr1_3:72941032-72941051 None:intergenic 50.0%
CAACGAGGCCTCATTTCGAA+CGG + chr1_3:72941369-72941388 Msa0139300:CDS 50.0%
AGGCCTCATTTCGAACGGAA+AGG + chr1_3:72941374-72941393 Msa0139300:CDS 50.0%
ATCGCCTCGAAGTTAGACTG+GGG + chr1_3:72942135-72942154 Msa0139300:intron 50.0%
!! AAAATGGTGCCACTTGCACC+AGG + chr1_3:72942277-72942296 Msa0139300:intron 50.0%
CAAAGGAGTCAGAGATGTGC+AGG - chr1_3:72942501-72942520 None:intergenic 50.0%
ATGTGCTATCGGCATCCCAA+AGG + chr1_3:72942871-72942890 Msa0139300:CDS 50.0%
TGTGCTATCGGCATCCCAAA+GGG + chr1_3:72942872-72942891 Msa0139300:CDS 50.0%
ACGTATCAGCTCAGCCCTTT+GGG - chr1_3:72942889-72942908 None:intergenic 50.0%
CAGGTGGCATCCCTTCAATT+TGG + chr1_3:72943200-72943219 Msa0139300:intron 50.0%
CTCGGGGATATTGTGTTAGG+CGG - chr1_3:72943406-72943425 None:intergenic 50.0%
TGCCTCGGGGATATTGTGTT+AGG - chr1_3:72943409-72943428 None:intergenic 50.0%
TTGCCATGTGCATATGCCTC+GGG - chr1_3:72943423-72943442 None:intergenic 50.0%
TTGTTGGGTGTTCTGCTCTC+TGG + chr1_3:72943753-72943772 Msa0139300:intron 50.0%
! CTTGAGTGGATTCCAGGATG+CGG - chr1_3:72943820-72943839 None:intergenic 50.0%
ATCAAGTTCGCAGAAGCTGC+AGG - chr1_3:72944071-72944090 None:intergenic 50.0%
TGCAGCTTCTGCGAACTTGA+TGG + chr1_3:72944070-72944089 Msa0139300:CDS 50.0%
GCAGCTTCTGCGAACTTGAT+GGG + chr1_3:72944071-72944090 Msa0139300:CDS 50.0%
TGCGAACTTGATGGGACTTC+AGG + chr1_3:72944079-72944098 Msa0139300:CDS 50.0%
ATCGGCAATGCTTCCTGGTA+TGG + chr1_3:72944715-72944734 Msa0139300:CDS 50.0%
! CAACGTCGTCAGCTTTATGC+TGG + chr1_3:72944764-72944783 Msa0139300:CDS 50.0%
TCGAATGGCTAAACCCGAAG+AGG + chr1_3:72944820-72944839 Msa0139300:CDS 50.0%
CGTGTAATCTGCAGATGCTG+AGG + chr1_3:72945497-72945516 Msa0139300:intron 50.0%
TGAGACACATCCTGGAGTTC+AGG + chr1_3:72946613-72946632 Msa0139300:CDS 50.0%
GGTGCTTAAATTAGAGGCGG+AGG - chr1_3:72946987-72947006 None:intergenic 50.0%
GCGTAAGTTTGTGATCACCC+AGG + chr1_3:72947668-72947687 Msa0139300:CDS 50.0%
! GTTGATGGAGCTCCCAAATC+AGG + chr1_3:72948046-72948065 Msa0139300:CDS 50.0%
TGCAGGGGGGAAAAAACCAA+AGG - chr1_3:72948175-72948194 None:intergenic 50.0%
TTCCATCCATTTCTGCAGGG+GGG - chr1_3:72948188-72948207 None:intergenic 50.0%
! GCTGATGTTGGCTATGCGAA+CGG + chr1_3:72948402-72948421 Msa0139300:intron 50.0%
CCCAGAACAGGATCCATCAT+TGG - chr1_3:72949243-72949262 None:intergenic 50.0%
CTAGGAATGCTCCTGATGCA+AGG + chr1_3:72949271-72949290 Msa0139300:CDS 50.0%
CGAGGTGGATATCAAACGCA+AGG - chr1_3:72949640-72949659 None:intergenic 50.0%
AGAACTTAAGCCGGTGCTCA+GGG - chr1_3:72949961-72949980 None:intergenic 50.0%
AAGAACTTAAGCCGGTGCTC+AGG - chr1_3:72949962-72949981 None:intergenic 50.0%
AACAGGCCTGAACCTGTTGT+TGG + chr1_3:72950246-72950265 Msa0139300:CDS 50.0%
GCATCTCCAACAACAGGTTC+AGG - chr1_3:72950255-72950274 None:intergenic 50.0%
CACACCAGTTTCCAGCTGAA+AGG - chr1_3:72950725-72950744 None:intergenic 50.0%
TGTGCTAACTGAGCCCCTTT+GGG + chr1_3:72950741-72950760 Msa0139300:CDS 50.0%
TCCGAACATGACAACAGCTG+AGG + chr1_3:72950846-72950865 Msa0139300:CDS 50.0%
TCTCTATGCTGAAGAGGCTG+CGG + chr1_3:72951379-72951398 Msa0139300:CDS 50.0%
CGGCTCAGAGAGAAAGAGAA+CGG + chr1_3:72951399-72951418 Msa0139300:CDS 50.0%
TATTGGGACTGATGTGGCCA+TGG + chr1_3:72951643-72951662 Msa0139300:intron 50.0%
AGGTGTGACCTAACTTCTGG+CGG + chr1_3:72951838-72951857 Msa0139300:three_prime_UTR 50.0%
TGCACAAACCGCCAGAAGTT+AGG - chr1_3:72951849-72951868 None:intergenic 50.0%
CCTCTCTATTTGGAGGGATG+GGG - chr1_3:72951989-72952008 None:intergenic 50.0%
TCGGGGAGAGAGAAGAGTTC+GGG - chr1_3:72939553-72939572 None:intergenic 55.0%
AATCTCCTCCGAGCGAGTCT+AGG + chr1_3:72939590-72939609 Msa0139300:five_prime_UTR 55.0%
ATCTCCTCCGAGCGAGTCTA+GGG + chr1_3:72939591-72939610 Msa0139300:five_prime_UTR 55.0%
AAAACCCTAGACTCGCTCGG+AGG - chr1_3:72939598-72939617 None:intergenic 55.0%
AGATCCAGTGCCGTAGAAGG+CGG - chr1_3:72939747-72939766 None:intergenic 55.0%
! CGGCACTGGATCTAAGCAAG+AGG + chr1_3:72939754-72939773 Msa0139300:CDS 55.0%
TGGCGTAAGCCAGCCTCTAA+AGG - chr1_3:72940671-72940690 None:intergenic 55.0%
AGCATGAGTGGCCAGCAAGA+TGG + chr1_3:72941582-72941601 Msa0139300:CDS 55.0%
TTAGCCGCTGCGACAAGATC+AGG - chr1_3:72941620-72941639 None:intergenic 55.0%
ATCGCCCCAGTCTAACTTCG+AGG - chr1_3:72942142-72942161 None:intergenic 55.0%
TTATCCCCGGCAGGCACTAA+CGG + chr1_3:72942347-72942366 Msa0139300:intron 55.0%
CACGTATCAGCTCAGCCCTT+TGG - chr1_3:72942890-72942909 None:intergenic 55.0%
GGGCCAATTGCAGGTGTGTT+TGG + chr1_3:72943268-72943287 Msa0139300:intron 55.0%
CGCCTAACACAATATCCCCG+AGG + chr1_3:72943404-72943423 Msa0139300:CDS 55.0%
ATCCCCGAGGCATATGCACA+TGG + chr1_3:72943417-72943436 Msa0139300:CDS 55.0%
TGCCATGTGCATATGCCTCG+GGG - chr1_3:72943422-72943441 None:intergenic 55.0%
ATGAGGTGAAGAACAGCGCC+AGG - chr1_3:72943557-72943576 None:intergenic 55.0%
CTCAAACAGCTCCGACACCA+AGG - chr1_3:72944027-72944046 None:intergenic 55.0%
!! CAGGTATCGGCAATGCTTCC+TGG + chr1_3:72944710-72944729 Msa0139300:intron 55.0%
!! CCTGGTATGGTTGATGGGCA+CGG + chr1_3:72944728-72944747 Msa0139300:CDS 55.0%
TCAGTGGTGAGGATTGGACC+TGG + chr1_3:72945536-72945555 Msa0139300:CDS 55.0%
TTCCCCCCTGCAGAAATGGA+TGG + chr1_3:72948183-72948202 Msa0139300:intron 55.0%
!! GGGAATAGTGGATTCCGAGG+TGG - chr1_3:72949655-72949674 None:intergenic 55.0%
GGGCATTTCGGCACACAGAA+AGG + chr1_3:72950212-72950231 Msa0139300:CDS 55.0%
GTGTGCTAACTGAGCCCCTT+TGG + chr1_3:72950740-72950759 Msa0139300:CDS 55.0%
CCCCATCCCTCCAAATAGAG+AGG + chr1_3:72951986-72952005 Msa0139300:three_prime_UTR 55.0%
CGGGGAGAGAGAAGAGTTCG+GGG - chr1_3:72939552-72939571 None:intergenic 60.0%
CTGAGCTTCTCAGCGGCCAT+CGG - chr1_3:72939677-72939696 None:intergenic 60.0%
ATCTCGCTGCTCGGCAGGTA+AGG - chr1_3:72941187-72941206 None:intergenic 60.0%
TTACCTGCCGAGCAGCGAGA+TGG + chr1_3:72941186-72941205 Msa0139300:CDS 60.0%
ATTCCATCTCGCTGCTCGGC+AGG - chr1_3:72941192-72941211 None:intergenic 60.0%
TGGTGGAAGCCTGGTGCAAG+TGG - chr1_3:72942289-72942308 None:intergenic 60.0%
ACTTGCACCAGGCTTCCACC+AGG + chr1_3:72942288-72942307 Msa0139300:intron 60.0%
TACCAAGACTGCACCCCACC+TGG - chr1_3:72942309-72942328 None:intergenic 60.0%
AGGTGGGGTGCAGTCTTGGT+AGG + chr1_3:72942308-72942327 Msa0139300:intron 60.0%
GGTGGGGTGCAGTCTTGGTA+GGG + chr1_3:72942309-72942328 Msa0139300:intron 60.0%
! GACGCACACAGCCTTATCCC+CGG + chr1_3:72942334-72942353 Msa0139300:intron 60.0%
GTTAGTGCCTGCCGGGGATA+AGG - chr1_3:72942348-72942367 None:intergenic 60.0%
ATCTCCGTTAGTGCCTGCCG+GGG - chr1_3:72942354-72942373 None:intergenic 60.0%
CATCTCCGTTAGTGCCTGCC+GGG - chr1_3:72942355-72942374 None:intergenic 60.0%
GCATCTCCGTTAGTGCCTGC+CGG - chr1_3:72942356-72942375 None:intergenic 60.0%
GCAGGCACTAACGGAGATGC+TGG + chr1_3:72942356-72942375 Msa0139300:intron 60.0%
GCAGGTTCACATCCGCATCC+TGG + chr1_3:72943805-72943824 Msa0139300:CDS 60.0%
CCGTGCCCATCAACCATACC+AGG - chr1_3:72944731-72944750 None:intergenic 60.0%
TCGATAGGGGCAATCAGCCC+TGG - chr1_3:72951443-72951462 None:intergenic 60.0%
! GCGACGGTGGCGTCGAGTAA+CGG - chr1_3:72939725-72939744 None:intergenic 65.0%
AGTGCCGTAGAAGGCGGCGA+CGG - chr1_3:72939741-72939760 None:intergenic 65.0%
TGCACCAGGCTTCCACCAGG+TGG + chr1_3:72942291-72942310 Msa0139300:intron 65.0%
GCACCAGGCTTCCACCAGGT+GGG + chr1_3:72942292-72942311 Msa0139300:intron 65.0%
CACCAGGCTTCCACCAGGTG+GGG + chr1_3:72942293-72942312 Msa0139300:intron 65.0%
CAAGACTGCACCCCACCTGG+TGG - chr1_3:72942306-72942325 None:intergenic 65.0%
CACCAGGTGGGGTGCAGTCT+TGG + chr1_3:72942304-72942323 Msa0139300:intron 65.0%
! CACACAGCCTTATCCCCGGC+AGG + chr1_3:72942338-72942357 Msa0139300:intron 65.0%
GGGGAACGCTCGCACTCGCA+CGG - chr1_3:72939408-72939427 None:intergenic 70.0%
GCCACCGTCGCCGCCTTCTA+CGG + chr1_3:72939734-72939753 Msa0139300:CDS 70.0%
GTCGCCGCCTTCTACGGCAC+TGG + chr1_3:72939740-72939759 Msa0139300:CDS 70.0%
CACCCCACCTGGTGGAAGCC+TGG - chr1_3:72942298-72942317 None:intergenic 70.0%
GCCGTAGAAGGCGGCGACGG+TGG - chr1_3:72939738-72939757 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 72939301 72952173 72939301 ID=Msa0139300;Name=Msa0139300
chr1_3 mRNA 72939301 72952173 72939301 ID=Msa0139300-mRNA-1;Parent=Msa0139300;Name=Msa0139300-mRNA-1;_AED=0.12;_eAED=0.13;_QI=376|0.93|0.93|1|0.93|0.93|33|494|1093
chr1_3 exon 72939301 72939775 72939301 ID=Msa0139300-mRNA-1:exon:25374;Parent=Msa0139300-mRNA-1
chr1_3 exon 72940094 72940210 72940094 ID=Msa0139300-mRNA-1:exon:25375;Parent=Msa0139300-mRNA-1
chr1_3 exon 72941150 72941242 72941150 ID=Msa0139300-mRNA-1:exon:25376;Parent=Msa0139300-mRNA-1
chr1_3 exon 72941361 72941432 72941361 ID=Msa0139300-mRNA-1:exon:25377;Parent=Msa0139300-mRNA-1
chr1_3 exon 72941575 72941682 72941575 ID=Msa0139300-mRNA-1:exon:25378;Parent=Msa0139300-mRNA-1
chr1_3 exon 72941754 72941836 72941754 ID=Msa0139300-mRNA-1:exon:25379;Parent=Msa0139300-mRNA-1
chr1_3 exon 72942839 72942977 72942839 ID=Msa0139300-mRNA-1:exon:25380;Parent=Msa0139300-mRNA-1
chr1_3 exon 72943061 72943129 72943061 ID=Msa0139300-mRNA-1:exon:25381;Parent=Msa0139300-mRNA-1
chr1_3 exon 72943203 72943280 72943203 ID=Msa0139300-mRNA-1:exon:25382;Parent=Msa0139300-mRNA-1
chr1_3 exon 72943394 72943455 72943394 ID=Msa0139300-mRNA-1:exon:25383;Parent=Msa0139300-mRNA-1
chr1_3 exon 72943540 72943584 72943540 ID=Msa0139300-mRNA-1:exon:25384;Parent=Msa0139300-mRNA-1
chr1_3 exon 72943793 72943916 72943793 ID=Msa0139300-mRNA-1:exon:25385;Parent=Msa0139300-mRNA-1
chr1_3 exon 72944002 72944100 72944002 ID=Msa0139300-mRNA-1:exon:25386;Parent=Msa0139300-mRNA-1
chr1_3 exon 72944713 72944919 72944713 ID=Msa0139300-mRNA-1:exon:25387;Parent=Msa0139300-mRNA-1
chr1_3 exon 72945090 72945149 72945090 ID=Msa0139300-mRNA-1:exon:25388;Parent=Msa0139300-mRNA-1
chr1_3 exon 72945511 72945621 72945511 ID=Msa0139300-mRNA-1:exon:25389;Parent=Msa0139300-mRNA-1
chr1_3 exon 72946343 72946440 72946343 ID=Msa0139300-mRNA-1:exon:25390;Parent=Msa0139300-mRNA-1
chr1_3 exon 72946526 72946634 72946526 ID=Msa0139300-mRNA-1:exon:25391;Parent=Msa0139300-mRNA-1
chr1_3 exon 72947624 72947689 72947624 ID=Msa0139300-mRNA-1:exon:25392;Parent=Msa0139300-mRNA-1
chr1_3 exon 72947778 72947876 72947778 ID=Msa0139300-mRNA-1:exon:25393;Parent=Msa0139300-mRNA-1
chr1_3 exon 72947987 72948067 72947987 ID=Msa0139300-mRNA-1:exon:25394;Parent=Msa0139300-mRNA-1
chr1_3 exon 72948196 72948285 72948196 ID=Msa0139300-mRNA-1:exon:25395;Parent=Msa0139300-mRNA-1
chr1_3 exon 72948775 72948860 72948775 ID=Msa0139300-mRNA-1:exon:25396;Parent=Msa0139300-mRNA-1
chr1_3 exon 72948990 72949070 72948990 ID=Msa0139300-mRNA-1:exon:25397;Parent=Msa0139300-mRNA-1
chr1_3 exon 72949152 72949334 72949152 ID=Msa0139300-mRNA-1:exon:25398;Parent=Msa0139300-mRNA-1
chr1_3 exon 72949498 72949564 72949498 ID=Msa0139300-mRNA-1:exon:25399;Parent=Msa0139300-mRNA-1
chr1_3 exon 72949932 72950042 72949932 ID=Msa0139300-mRNA-1:exon:25400;Parent=Msa0139300-mRNA-1
chr1_3 exon 72950148 72950288 72950148 ID=Msa0139300-mRNA-1:exon:25401;Parent=Msa0139300-mRNA-1
chr1_3 exon 72950507 72950644 72950507 ID=Msa0139300-mRNA-1:exon:25402;Parent=Msa0139300-mRNA-1
chr1_3 exon 72950730 72950867 72950730 ID=Msa0139300-mRNA-1:exon:25403;Parent=Msa0139300-mRNA-1
chr1_3 exon 72950941 72951045 72950941 ID=Msa0139300-mRNA-1:exon:25404;Parent=Msa0139300-mRNA-1
chr1_3 exon 72951368 72951490 72951368 ID=Msa0139300-mRNA-1:exon:25405;Parent=Msa0139300-mRNA-1
chr1_3 exon 72951680 72952173 72951680 ID=Msa0139300-mRNA-1:exon:25406;Parent=Msa0139300-mRNA-1
chr1_3 five_prime_UTR 72939301 72939676 72939301 ID=Msa0139300-mRNA-1:five_prime_utr;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72939677 72939775 72939677 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72940094 72940210 72940094 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72941150 72941242 72941150 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72941361 72941432 72941361 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72941575 72941682 72941575 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72941754 72941836 72941754 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72942839 72942977 72942839 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72943061 72943129 72943061 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72943203 72943280 72943203 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72943394 72943455 72943394 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72943540 72943584 72943540 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72943793 72943916 72943793 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72944002 72944100 72944002 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72944713 72944919 72944713 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72945090 72945149 72945090 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72945511 72945621 72945511 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72946343 72946440 72946343 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72946526 72946634 72946526 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72947624 72947689 72947624 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72947778 72947876 72947778 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72947987 72948067 72947987 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72948196 72948285 72948196 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72948775 72948860 72948775 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72948990 72949070 72948990 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72949152 72949334 72949152 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72949498 72949564 72949498 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72949932 72950042 72949932 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72950148 72950288 72950148 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72950507 72950644 72950507 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72950730 72950867 72950730 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72950941 72951045 72950941 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 CDS 72951368 72951490 72951368 ID=Msa0139300-mRNA-1:cds;Parent=Msa0139300-mRNA-1
chr1_3 three_prime_UTR 72951680 72952173 72951680 ID=Msa0139300-mRNA-1:three_prime_utr;Parent=Msa0139300-mRNA-1
Gene Sequence

>Msa0139300

ATGGCCGCTGAGAAGCTCAGAGATTTGAGCTCTCCGATCGATGTTCCGTTACTCGACGCCACCGTCGCCGCCTTCTACGGCACTGGATCTAAGCAAGAGAGAAGTGCTGCTGATTCGATTTTGCGGGACTTGCAAAACAATCCTGATATGTGGCTTCAAGTCATGCATATTTTGCAGAACACTCAAAATCTCAATACCAAGTTTTTTGCATTGCAGGTTCTTGAAGGCGTAATTAAATATAGATGGAATGCCTTACCTGCCGAGCAGCGAGATGGAATGAAAAATTTCATCTCCGACATCATTGTTCAGCTTTCTAGCAACGAGGCCTCATTTCGAACGGAAAGGTTGTATGTCAACAAGCTCAACATTATATTAGTTCAGATTTTGAAGCATGAGTGGCCAGCAAGATGGCGAAGCTTTATTCCTGATCTTGTCGCAGCGGCTAAAACTAGTGAAACGATCTGTGAGAATTGCATGGCTATATTGAAACTTTTGAGCGAAGAGGTTTTTGATTTTTCAAGAGGAGAAATGACACAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGCGAATTTCAACTCATACATGAGTTATGCTTATATGTGCTATCGGCATCCCAAAGGGCTGAGCTGATACGTGCCACACTATCTACATTGCATGCCTTCTTATCATGGATCCCCTTGGGTTATATATTTGAATCACCGTTGCTTGAGACACTCCTAAAGTTTTTCCCAGTTCCAGCATATCGAAATCTTACGCTGCAATGTTTAACAGAGGTGGCATCCCTTCAATTTGGGAATTTTTATGATGTGCAATATGTCAAGATGTATGGTATATTCATGGGCCAATTGCAGACCATACTGCCGCCTAACACAATATCCCCGAGGCATATGCACATGGCAATAGTGAAGAACAAGCATTTATACAGAACCTGGCGCTGTTCTTCACCTCATTTTTTAAGCCTTCTATTAATGCAGGTTCACATCCGCATCCTGGAATCCACTCAAGAGAATATAACAACTTTGCTTTTGGGCCTTGAATATCTTATCAGCATTTCATACGTTGACGATACTGAAGTTTTTAAGGTCTGTTTGGACTACTGGAATTCCTTGGTGTCGGAGCTGTTTGAGCCACATCGAAGTTTGGATAATCCTGCAGCTTCTGCGAACTTGATGGGACTTCAGGTATCGGCAATGCTTCCTGGTATGGTTGATGGGCACGGTTCTCAGCTTCTTCAACGTCGTCAGCTTTATGCTGGTCCCATGTCAAAGTTGAGAATGCTTATGATCTGTCGAATGGCTAAACCCGAAGAGGTTCTCATAGTTGAAGATGAAAATGGGAATATTGTCCGTGAAACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTTATTTACTTGGCACATCTTGACCATGATGATACTGAAAAGCAGATGCTGAGGAAATTAAGTAAACAACTCAGTGGTGAGGATTGGACCTGGAACAATTTGAATACACTCTGCTGGGCAATTGGATCTATATCTGGTTCCATGATAGAAGAGCAGGAAAACAGATTTTTGGTTATGGTAATTCGTGATTTATTAAATCTATGTGAAATCACGAAGGGAAAAGATAACAAAGCAGTTATTGCAAGTAATATCATGTATGTTGTTGGCCAGTATCCCCGATTTTTAAGAGCTCATTGGAAGTTTCTTAAAACTGTTGTGAACAAGTTGTTTGAGTTTATGCATGAGACACATCCTGGAGTTCAGGATATGGCGTGTGACACTTTTTTGAAAATAGTTCAGAAGTGCAAGCGTAAGTTTGTGATCACCCAGGTTGGCGAAAACGAGCCATTTGTATCTGAACTTCTATCAGGCCTTCCAATCACTATTGCAGATCTTGAACCCCATCAGATACACTCCTTCTACGAATCTGTTGCTCATATGATTCAAGCAGAGTCTGATTCACAGAAGAGAGATGAATTTCTTCAGCGGTTGATGGAGCTCCCAAATCAGAAATGGATGGAAATTATAGGCCAGGCACATCAAAATGTTGATTTTTTGAAGGATCAAGATGTAATACGGACTGTGCTTAATATATTGCAGACGAATACAAGTGTTGCATCTTCTTTAGGGACATTTTTCCTGCCTCAAATCACAATGATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGTGAGCTTATTTCTAAAAGTATTTTAGAAGGGGGGCCTTATGCATCTAAAACATCTTATGTGAAACTTCTACGTTCGGTTAAGAGGGAGACACTTAAATTGATCGAGACATTCTTGGATAAGGCTGAAGATCAACCACAGATTGGAAAACAATTTGTGCCACCAATGATGGATCCTGTTCTGGGAGATTATGCTAGGAATGCTCCTGATGCAAGGGAATCTGAGGTTTTGTCCCTTTTTGCTACAATAGTAAACAAATATAAAGCTACAATGATTGAAGATGTGCCTCGCATATTTGAAGCCGTTTTTCAGTGCACATTAGAGATGATTACAAAAAACTTTGAAGATTACCCTGAGCACCGGCTTAAGTTCTTCTCTCTTCTCCGCGCCATAGCTACTCATTGTTTTCCTGCACTGATCTGTTTGTCAAGCCAGTCTGTGTCTGATATTTTTGGTCATCTGTTTCAGCAATTGAAGCTTGTTATGGATTCAATCATGTGGGCATTTCGGCACACAGAAAGGAATATTGCTGAAACAGGCCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGGCTCAGAGTTCTGTAATCAGTTCTACAGGACATACTTCTTGACAACTGAGAATGAGATATTTGCTGTTTTGACCGATACTTTTCATAAGCCTGGGTTCAAATTACATGTCCTGGTGCTTCAGCATTTGTTTTGTCTGCTGGAAACTGGTGTGCTAACTGAGCCCCTTTGGGATGTTGCTACAAGTCCACAGTCATACCCAAGTAATGCAGTTTTTGTTCGTGAGTATACTATAAAGCTTCTAAGTGCTTCTTTTCCGAACATGACAACAGCTGAGGTTACCCAATTTGTTAATGGACTATTTGAGTCTACAAATGATCTCTCTACATTTAAAACCCATATACGAGATTTCCTGATACAGTCAAAAGAATTTTCAGCTCAGGATAACAAAGATCTCTATGCTGAAGAGGCTGCGGCTCAGAGAGAAAGAGAACGGCAAAGAATGCTTTCTATTCCAGGGCTGATTGCCCCTATCGAGTTGCAAGATGAAATGGTGGACTCATAG
Protein sequence

>Msa0139300

MAAEKLRDLSSPIDVPLLDATVAAFYGTGSKQERSAADSILRDLQNNPDMWLQVMHILQNTQNLNTKFFALQVLEGVIKYRWNALPAEQRDGMKNFISDIIVQLSSNEASFRTERLYVNKLNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVPAYRNLTLQCLTEVASLQFGNFYDVQYVKMYGIFMGQLQTILPPNTISPRHMHMAIVKNKHLYRTWRCSSPHFLSLLLMQVHIRILESTQENITTLLLGLEYLISISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDNPAASANLMGLQVSAMLPGMVDGHGSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLMELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDMLNVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQSVSDIFGHLFQQLKLVMDSIMWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTTENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLTEPLWDVATSPQSYPSNAVFVREYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS*