Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463480 | XP_013469068.1 | 98.361 | 976 | 16 | 0 | 1 | 976 | 1 | 976 | 0.0 | 1994 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463480 | sp|Q10MI0|SRL2_ORYSJ | 50.210 | 952 | 449 | 15 | 1 | 946 | 1 | 933 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463480 | A0A072VN87 | 98.361 | 976 | 16 | 0 | 1 | 976 | 1 | 976 | 0.0 | 1994 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0080590 | Msa1463480 | 0.867878 | 9.892508e-66 | -8.615850e-47 |
| Msa0820620 | Msa1463480 | 0.838685 | 2.483019e-57 | -8.615850e-47 |
| Msa0139300 | Msa1463480 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
| Msa0186000 | Msa1463480 | 0.893801 | 4.478936e-75 | -8.615850e-47 |
| Msa1087660 | Msa1463480 | 0.884280 | 2.194677e-71 | -8.615850e-47 |
| Msa0580250 | Msa1463480 | 0.800390 | 1.474069e-48 | -8.615850e-47 |
| Msa0580320 | Msa1463480 | 0.806639 | 7.459236e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463480 | MtrunA17_Chr1g0192801 | 98.361 | 976 | 16 | 0 | 1 | 976 | 1 | 976 | 0.0 | 1994 |
| Msa1463480 | MtrunA17_Chr2g0329341 | 35.110 | 957 | 522 | 21 | 1 | 940 | 1 | 875 | 1.11e-173 | 531 |
| Msa1463480 | MtrunA17_Chr4g0033461 | 34.372 | 963 | 543 | 21 | 1 | 940 | 1 | 897 | 1.70e-172 | 528 |
| Msa1463480 | MtrunA17_Chr7g0257661 | 34.921 | 945 | 546 | 20 | 2 | 929 | 6 | 898 | 5.12e-171 | 525 |
| Msa1463480 | MtrunA17_Chr4g0019461 | 33.366 | 1031 | 573 | 24 | 1 | 970 | 1 | 978 | 5.37e-171 | 526 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463480 | AT5G26850.4 | 53.183 | 974 | 425 | 11 | 1 | 969 | 1 | 948 | 0.0 | 1031 |
| Msa1463480 | AT5G26850.3 | 53.183 | 974 | 425 | 11 | 1 | 969 | 1 | 948 | 0.0 | 1031 |
| Msa1463480 | AT5G26850.1 | 53.183 | 974 | 425 | 11 | 1 | 969 | 1 | 948 | 0.0 | 1031 |
| Msa1463480 | AT5G26850.2 | 53.183 | 974 | 425 | 11 | 1 | 969 | 1 | 948 | 0.0 | 1031 |
| Msa1463480 | AT5G21080.1 | 33.898 | 1003 | 573 | 25 | 1 | 952 | 1 | 964 | 1.09e-162 | 504 |
| Msa1463480 | AT2G41830.1 | 33.750 | 960 | 579 | 24 | 2 | 935 | 6 | 934 | 3.50e-161 | 501 |
| Msa1463480 | AT1G05960.1 | 33.023 | 966 | 573 | 19 | 1 | 944 | 1 | 914 | 6.08e-153 | 478 |
| Msa1463480 | AT1G05960.3 | 33.023 | 966 | 573 | 19 | 1 | 944 | 1 | 914 | 6.08e-153 | 478 |
| Msa1463480 | AT1G05960.4 | 33.023 | 966 | 573 | 19 | 1 | 944 | 1 | 914 | 6.08e-153 | 478 |
| Msa1463480 | AT1G05960.2 | 32.421 | 987 | 572 | 20 | 1 | 944 | 1 | 935 | 8.22e-149 | 468 |
| Msa1463480 | AT2G41830.2 | 30.602 | 830 | 519 | 24 | 132 | 935 | 1 | 799 | 3.78e-106 | 351 |
Find 221 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACACGAACCGGGGATTT+TGG | 0.095953 | tig0043321:-3517 | Msa1463480:intergenic |
| GCCAGCTTCTTTCTGCCTTT+TGG | 0.155395 | tig0043321:+7413 | Msa1463480:CDS |
| CACTCATAACATTGAGAAAT+TGG | 0.177257 | tig0043321:+4883 | Msa1463480:CDS |
| CATATTTGAGCCCATATTTC+CGG | 0.235205 | tig0043321:-5711 | Msa1463480:intergenic |
| GGACAGAGGCTCATCATAAT+TGG | 0.246862 | tig0043321:+5430 | Msa1463480:CDS |
| ATCACCTGATAAGTCGTTTC+TGG | 0.260485 | tig0043321:+9528 | Msa1463480:CDS |
| TATCAGCATTGGACAACTTA+TGG | 0.261951 | tig0043321:+9069 | Msa1463480:CDS |
| GTTGGGAATTGTGTAGAAAA+TGG | 0.270724 | tig0043321:+3375 | Msa1463480:intron |
| TTCCATTGAGAATTGCTTAC+TGG | 0.278494 | tig0043321:+6353 | Msa1463480:CDS |
| TGACTAGCCATAGCGTTATA+TGG | 0.286097 | tig0043321:-9433 | Msa1463480:intergenic |
| AGTTGCATGAGAAGAGATTC+AGG | 0.288997 | tig0043321:-6884 | Msa1463480:intergenic |
| GAGCTGAGTTTGTAAAAGTT+AGG | 0.289888 | tig0043321:-7217 | Msa1463480:intergenic |
| AAATTGAAAAGCCGGAAATA+TGG | 0.296411 | tig0043321:+5700 | Msa1463480:CDS |
| ATAATGTTGACATGGCTAAT+TGG | 0.306488 | tig0043321:-8535 | Msa1463480:intergenic |
| TTCCAAGGATGAGGCTATTC+AGG | 0.309910 | tig0043321:+4633 | Msa1463480:CDS |
| CTCTCTGCGGTCTAGATATA+TGG | 0.311683 | tig0043321:+7009 | Msa1463480:CDS |
| ATATGGATCAGCGCAATAAA+AGG | 0.322507 | tig0043321:+7026 | Msa1463480:CDS |
| TCCAGCTTCCTCTGTCTCTC+TGG | 0.332100 | tig0043321:+8069 | Msa1463480:CDS |
| GGTGAAGAAGGTTGTTGTTC+AGG | 0.332936 | tig0043321:-2835 | Msa1463480:intergenic |
| ATATTTGAAGGTAAGTTATC+AGG | 0.334594 | tig0043321:-7451 | Msa1463480:intergenic |
| GCAGCCACTATTTGACTTGA+TGG | 0.335786 | tig0043321:+6490 | Msa1463480:CDS |
| AGTTAGTTTGGAAGAAGATC+TGG | 0.338768 | tig0043321:-2879 | Msa1463480:intergenic |
| CAACACTGGGCTCCTCAAAA+TGG | 0.345616 | tig0043321:+5819 | Msa1463480:CDS |
| TGCTTACTGGAAATCGCTAA+TGG | 0.347104 | tig0043321:+6366 | Msa1463480:CDS |
| GTGTTTGCTGTCCTGCTTTG+AGG | 0.348843 | tig0043321:+3440 | Msa1463480:CDS |
| TCAAATATGCATTCAAAGAT+TGG | 0.351182 | tig0043321:+5725 | Msa1463480:CDS |
| CTATCTTTGTATTATCTGTT+GGG | 0.351742 | tig0043321:+8260 | Msa1463480:CDS |
| CACGGAAGAAGCTTTCAAAT+TGG | 0.352892 | tig0043321:+9479 | Msa1463480:CDS |
| ATGAATCAAAGCATTCATTA+TGG | 0.353775 | tig0043321:-8594 | Msa1463480:intergenic |
| TAACCAGGTTGATCCGTTCT+TGG | 0.354177 | tig0043321:+8439 | Msa1463480:intron |
| AGGGAAGGATCCTTTACTTC+TGG | 0.359637 | tig0043321:-5540 | Msa1463480:intergenic |
| TCACTTAGCTTCATAACATA+TGG | 0.363478 | tig0043321:-7379 | Msa1463480:intergenic |
| ACATCTCCGGAAAAGTTTCC+AGG | 0.366842 | tig0043321:+6275 | Msa1463480:CDS |
| AAAGAAGTACAGAAAATATA+AGG | 0.370150 | tig0043321:-6955 | Msa1463480:intergenic |
| CACAACTATGCGTCGTGTAT+TGG | 0.373040 | tig0043321:+5767 | Msa1463480:CDS |
| AGCTGAGTTTGTAAAAGTTA+GGG | 0.379411 | tig0043321:-7216 | Msa1463480:intergenic |
| TGTATTATCTGTTGGGATGC+TGG | 0.380197 | tig0043321:+8267 | Msa1463480:CDS |
| GAAGCTAAGTGAAGATCAAA+TGG | 0.380515 | tig0043321:+7390 | Msa1463480:CDS |
| TTGGGAATTGTGTAGAAAAT+GGG | 0.383142 | tig0043321:+3376 | Msa1463480:exon |
| AACTCAGCTCAATCATTGAT+AGG | 0.385267 | tig0043321:+7230 | Msa1463480:CDS |
| GCTTACTGGAAATCGCTAAT+GGG | 0.386680 | tig0043321:+6367 | Msa1463480:CDS |
| ACGATGTGAGCACATCATTC+AGG | 0.386855 | tig0043321:-8321 | Msa1463480:intergenic |
| GTCTCTCTGGACTATGTTGT+TGG | 0.387587 | tig0043321:+8082 | Msa1463480:CDS |
| GGAGGGGAAAGAGGCATCTT+TGG | 0.392907 | tig0043321:-9034 | Msa1463480:intergenic |
| CAACAAATTCACTGGAGGCC+TGG | 0.407252 | tig0043321:-6293 | Msa1463480:intergenic |
| ATCTTCACCTCCTGAATTTG+AGG | 0.409146 | tig0043321:-8966 | Msa1463480:intergenic |
| TAAATAAATACCTGGTTAAG+AGG | 0.409724 | tig0043321:-5560 | Msa1463480:intergenic |
| TAATGTAACTTCGGAGCTCT+TGG | 0.409971 | tig0043321:+4606 | Msa1463480:CDS |
| AGATGAACCTTGTTAGAGAT+TGG | 0.410559 | tig0043321:-4666 | Msa1463480:intergenic |
| CCACTTTAGATAACTATGAT+TGG | 0.410939 | tig0043321:+5379 | Msa1463480:CDS |
| CCTTTACTTCTGGTCGTGGT+TGG | 0.415418 | tig0043321:-5530 | Msa1463480:intergenic |
| GTAGTCCTACCAAGTTAGTT+TGG | 0.416879 | tig0043321:-2891 | Msa1463480:intergenic |
| TCTATCTTTGTATTATCTGT+TGG | 0.417855 | tig0043321:+8259 | Msa1463480:CDS |
| CAGGCCTCCAGTGAATTTGT+TGG | 0.419624 | tig0043321:+6294 | Msa1463480:CDS |
| CCTGATGAAGACTTTGTGTT+TGG | 0.420588 | tig0043321:+8780 | Msa1463480:CDS |
| ATATAGGCCGTACCATTACT+TGG | 0.422606 | tig0043321:-8107 | Msa1463480:intergenic |
| CTGGGCTCCTCAAAATGGTT+TGG | 0.428933 | tig0043321:+5824 | Msa1463480:CDS |
| AAGGCCAGAAACGACTTATC+AGG | 0.434309 | tig0043321:-9532 | Msa1463480:intergenic |
| GAGAGGAAACTTCATGTGTA+TGG | 0.434340 | tig0043321:-6991 | Msa1463480:intergenic |
| GGTAGACGGTTAGCAGAGAT+TGG | 0.436369 | tig0043321:+6231 | Msa1463480:CDS |
| AACCAGGTTGATCCGTTCTT+GGG | 0.438206 | tig0043321:+8440 | Msa1463480:intron |
| AGCCGGGCTGGTTCAGTTGT+TGG | 0.439952 | tig0043321:+5477 | Msa1463480:CDS |
| AGGTAAGTTATCAGGAAGAT+TGG | 0.440492 | tig0043321:-7443 | Msa1463480:intergenic |
| AGCAATTCTCAATGGAACTT+TGG | 0.442262 | tig0043321:-6347 | Msa1463480:intergenic |
| GCTATAGCTTCAATATTTGA+AGG | 0.445577 | tig0043321:-7463 | Msa1463480:intergenic |
| GGTACCAATGCTGCAGATCA+TGG | 0.447898 | tig0043321:+7118 | Msa1463480:CDS |
| TTACATCTGCGTCTTACAAA+TGG | 0.448384 | tig0043321:-4401 | Msa1463480:intergenic |
| ACGCATAGTTGTGCTTTCCT+TGG | 0.450738 | tig0043321:-5757 | Msa1463480:intergenic |
| ACCCTAGAAAATATTCCATC+TGG | 0.453377 | tig0043321:+6518 | Msa1463480:CDS |
| TCAATCATTGATAGGGCTAC+AGG | 0.458148 | tig0043321:+7238 | Msa1463480:CDS |
| AATTGAAAAGCCGGAAATAT+GGG | 0.458899 | tig0043321:+5701 | Msa1463480:CDS |
| ACACACATGCTCTCACAAGC+TGG | 0.465349 | tig0043321:-3421 | Msa1463480:intergenic |
| CAGCCTCATGTTATCAGCAT+TGG | 0.470689 | tig0043321:+9058 | Msa1463480:CDS |
| GGGATACAGTCGCAGAAGAA+TGG | 0.471163 | tig0043321:+7167 | Msa1463480:CDS |
| TTATTCTCAAGAGTCGTTGT+CGG | 0.472995 | tig0043321:+8839 | Msa1463480:CDS |
| TTCCAGTAAGCAATTCTCAA+TGG | 0.475291 | tig0043321:-6355 | Msa1463480:intergenic |
| AATATTCCATCTGGTGTTGT+TGG | 0.475831 | tig0043321:+6527 | Msa1463480:CDS |
| CCATGAAAACTGCTGTTTGA+GGG | 0.478275 | tig0043321:+4946 | Msa1463480:CDS |
| GTGACCTTTGCAGACATCTC+CGG | 0.479951 | tig0043321:+6262 | Msa1463480:CDS |
| GAAGAAGCTTTCAAATTGGT+TGG | 0.480041 | tig0043321:+9483 | Msa1463480:CDS |
| GACTAGCCATAGCGTTATAT+GGG | 0.480113 | tig0043321:-9432 | Msa1463480:intergenic |
| AATACCTTTGGAATCCGAAA+AGG | 0.481562 | tig0043321:-4155 | Msa1463480:intergenic |
| TCCAGAGAGACAGAGGAAGC+TGG | 0.483712 | tig0043321:-8070 | Msa1463480:intergenic |
| AGCTTCTGTGATACATCAGC+TGG | 0.483993 | tig0043321:+6125 | Msa1463480:CDS |
| TTGTTCATGATGACAAAGAA+AGG | 0.485769 | tig0043321:+7146 | Msa1463480:CDS |
| CACCTGCTGCACACGTAAGT+TGG | 0.485976 | tig0043321:-6606 | Msa1463480:intergenic |
| CAGTAACGCAGCACTTGAAA+AGG | 0.486168 | tig0043321:+9564 | Msa1463480:CDS |
| TTAGCCATGCAGATTAGATC+AGG | 0.487063 | tig0043321:+6210 | Msa1463480:CDS |
| GACAGAGGCTCATCATAATT+GGG | 0.487979 | tig0043321:+5431 | Msa1463480:CDS |
| CCAATCATAGTTATCTAAAG+TGG | 0.491188 | tig0043321:-5379 | Msa1463480:intergenic |
| CTAGTCAGTGTGAATCGCTT+GGG | 0.491508 | tig0043321:+9449 | Msa1463480:CDS |
| TGTTTGTCTACTTTGATACA+AGG | 0.491516 | tig0043321:+5796 | Msa1463480:CDS |
| TTGTTCTCCAACAAATTCAC+TGG | 0.494096 | tig0043321:-6301 | Msa1463480:intergenic |
| TCTTCACCTCCTGAATTTGA+GGG | 0.495264 | tig0043321:-8965 | Msa1463480:intergenic |
| TCCAAAAGGCAGAAAGAAGC+TGG | 0.495456 | tig0043321:-7414 | Msa1463480:intergenic |
| ACTTTGATACAAGGCAACAC+TGG | 0.496348 | tig0043321:+5805 | Msa1463480:CDS |
| AGTGGTATGGTAGGTGAAGA+AGG | 0.497023 | tig0043321:-2847 | Msa1463480:intergenic |
| AAAGTGACGATGCTGACATC+AGG | 0.497408 | tig0043321:+5409 | Msa1463480:CDS |
| CTTGATCTTGACCTCAAAGC+AGG | 0.497671 | tig0043321:-3451 | Msa1463480:intergenic |
| GGCCAACTTACGTGTGCAGC+AGG | 0.497828 | tig0043321:+6604 | Msa1463480:CDS |
| TGCCTGAATAGCCTCATCCT+TGG | 0.498100 | tig0043321:-4635 | Msa1463480:intergenic |
| CCAAACACAAAGTCTTCATC+AGG | 0.499803 | tig0043321:-8780 | Msa1463480:intergenic |
| GTCCGTAGTGAAAGCCGGGC+TGG | 0.501507 | tig0043321:+5465 | Msa1463480:CDS |
| TGTTGTTCAGGAATGGAGAG+AGG | 0.501776 | tig0043321:-2823 | Msa1463480:intergenic |
| TAGAGAAGAAATTGAAAAGC+CGG | 0.502337 | tig0043321:+5692 | Msa1463480:intron |
| AATGTGGATTTGAGAGAGTA+TGG | 0.504392 | tig0043321:+8497 | Msa1463480:CDS |
| CATTGGACAACTTATGGAAT+CGG | 0.507209 | tig0043321:+9075 | Msa1463480:CDS |
| AACAAGGTTCATCTACTGTC+AGG | 0.509746 | tig0043321:+4675 | Msa1463480:CDS |
| AGAAGGTTGTTGTTCAGGAA+TGG | 0.511294 | tig0043321:-2830 | Msa1463480:intergenic |
| ATTCCCATGATCTGCAGCAT+TGG | 0.511420 | tig0043321:-7122 | Msa1463480:intergenic |
| AGGTTGTCCGTAGTGAAAGC+CGG | 0.512182 | tig0043321:+5460 | Msa1463480:CDS |
| AGATAGACCTTTGATACGCA+GGG | 0.512398 | tig0043321:-8243 | Msa1463480:intergenic |
| GGATCCTTTACTTCTGGTCG+TGG | 0.513079 | tig0043321:-5534 | Msa1463480:intergenic |
| GATCTTCTTCCAAACTAACT+TGG | 0.515141 | tig0043321:+2882 | Msa1463480:five_prime_UTR |
| CTTGCAATGCCTTTCAGCAA+TGG | 0.516015 | tig0043321:+4976 | Msa1463480:CDS |
| CCCATGAAAACTGCTGTTTG+AGG | 0.516446 | tig0043321:+4945 | Msa1463480:CDS |
| TCGAGCACTCACTTCTGCAT+TGG | 0.516674 | tig0043321:+6583 | Msa1463480:CDS |
| GTTGTTCAGGAATGGAGAGA+GGG | 0.517269 | tig0043321:-2822 | Msa1463480:intergenic |
| AAGATTGGCTTGAATCCAAA+AGG | 0.517677 | tig0043321:-7428 | Msa1463480:intergenic |
| TCTCCGACAGTAGCACAGTC+AGG | 0.520659 | tig0043321:-8749 | Msa1463480:intergenic |
| TCAAAATGGTTTGGCAATGG+TGG | 0.522026 | tig0043321:+5833 | Msa1463480:CDS |
| TGAGGCTGCGGAGGGGAAAG+AGG | 0.522774 | tig0043321:-9043 | Msa1463480:intergenic |
| GCTAGTCAGTGTGAATCGCT+TGG | 0.525853 | tig0043321:+9448 | Msa1463480:CDS |
| TATCAGGTGATTGAGTGTAA+TGG | 0.527881 | tig0043321:-9516 | Msa1463480:intergenic |
| ACAGACGTAGAGGCTCGTAT+TGG | 0.528380 | tig0043321:+6926 | Msa1463480:CDS |
| TCAAAGCATTCATTATGGTC+TGG | 0.528453 | tig0043321:-8589 | Msa1463480:intergenic |
| ACTACATAGGATTTAAGTTG+AGG | 0.535110 | tig0043321:-6171 | Msa1463480:intergenic |
| CCTAAAAGACAAAGATAACC+TGG | 0.537904 | tig0043321:+8034 | Msa1463480:CDS |
| ATTCTTGTAGGAAGCATATG+AGG | 0.538567 | tig0043321:+9947 | Msa1463480:intron |
| TCATGTGTATGGAAGGAACT+TGG | 0.541459 | tig0043321:-6980 | Msa1463480:intergenic |
| AATCGCTTGGGACATGTTCA+CGG | 0.544060 | tig0043321:+9461 | Msa1463480:CDS |
| AAGATCTGGGAGTGAGTGAG+TGG | 0.545041 | tig0043321:-2865 | Msa1463480:intergenic |
| TCATCATAATTGGGTGAATG+AGG | 0.546464 | tig0043321:+5440 | Msa1463480:CDS |
| GAAAGTATGCATGCTATCAC+AGG | 0.546637 | tig0043321:+4910 | Msa1463480:CDS |
| TGCGTTACTGTTACGAGCAA+AGG | 0.547088 | tig0043321:-9551 | Msa1463480:intergenic |
| CTGATAACATGAGGCTGCGG+AGG | 0.547188 | tig0043321:-9052 | Msa1463480:intergenic |
| GCTGGAAGAAGCGGATCACC+AGG | 0.548570 | tig0043321:-8052 | Msa1463480:intergenic |
| CCACTGCTTGTAGGCACTGG+AGG | 0.548875 | tig0043321:+9366 | Msa1463480:intron |
| ACAGAGGAAGCTGGAAGAAG+CGG | 0.549164 | tig0043321:-8061 | Msa1463480:intergenic |
| GTACCAATGCTGCAGATCAT+GGG | 0.551545 | tig0043321:+7119 | Msa1463480:CDS |
| TCCTCAAAATGGTTTGGCAA+TGG | 0.552323 | tig0043321:+5830 | Msa1463480:CDS |
| GCCTCTCCCATATAACGCTA+TGG | 0.557171 | tig0043321:+9426 | Msa1463480:CDS |
| GGTTGTCCGTAGTGAAAGCC+GGG | 0.558066 | tig0043321:+5461 | Msa1463480:CDS |
| AGGATGAGCTTCCAAATGAA+AGG | 0.558576 | tig0043321:+4096 | Msa1463480:intron |
| CCAACCACGACCAGAAGTAA+AGG | 0.559542 | tig0043321:+5530 | Msa1463480:CDS |
| GTTAGTTTGGAAGAAGATCT+GGG | 0.559762 | tig0043321:-2878 | Msa1463480:intergenic |
| AAGATTGGTTGAATTAGCCA+AGG | 0.561860 | tig0043321:+5740 | Msa1463480:CDS |
| CTTTGATACAAGGCAACACT+GGG | 0.562685 | tig0043321:+5806 | Msa1463480:CDS |
| ATTGCCATCAAGTCAAATAG+TGG | 0.564299 | tig0043321:-6494 | Msa1463480:intergenic |
| TACCAACAACTGAACCAGCC+CGG | 0.566000 | tig0043321:-5479 | Msa1463480:intergenic |
| GGAAACTTCATGTGTATGGA+AGG | 0.566576 | tig0043321:-6987 | Msa1463480:intergenic |
| CACACATGCTCTCACAAGCT+GGG | 0.566639 | tig0043321:-3420 | Msa1463480:intergenic |
| GGAGCTCTTGGACTATTCCA+AGG | 0.568212 | tig0043321:+4618 | Msa1463480:CDS |
| GCCATAGCGTTATATGGGAG+AGG | 0.568777 | tig0043321:-9427 | Msa1463480:intergenic |
| AACCAGCCCGGCTTTCACTA+CGG | 0.569428 | tig0043321:-5467 | Msa1463480:intergenic |
| TGTTCATGATGACAAAGAAA+GGG | 0.570353 | tig0043321:+7147 | Msa1463480:CDS |
| ACTCAGCTCAATCATTGATA+GGG | 0.570479 | tig0043321:+7231 | Msa1463480:CDS |
| AAGCTCCGCAGAGGCAGAGA+TGG | 0.571699 | tig0043321:+7097 | Msa1463480:CDS |
| AAATACCTGGTTAAGAGGGA+AGG | 0.574826 | tig0043321:-5555 | Msa1463480:intergenic |
| AAGATAGACCTTTGATACGC+AGG | 0.576509 | tig0043321:-8244 | Msa1463480:intergenic |
| CAACTCAGATAATGTTGACA+TGG | 0.576748 | tig0043321:-8543 | Msa1463480:intergenic |
| CTTGGACTATTCCAAGGATG+AGG | 0.577851 | tig0043321:+4624 | Msa1463480:CDS |
| AGGATCCTTCCCTCTTAACC+AGG | 0.580463 | tig0043321:+5550 | Msa1463480:CDS |
| AAATAAATACCTGGTTAAGA+GGG | 0.580806 | tig0043321:-5559 | Msa1463480:intergenic |
| TGCATGCTATCACAGGAGCC+TGG | 0.581266 | tig0043321:+4917 | Msa1463480:CDS |
| AGAGTCGTTGTCGGTTGATG+AGG | 0.581281 | tig0043321:+8848 | Msa1463480:CDS |
| GAGGTAGCAAGTCATGTGGC+AGG | 0.584697 | tig0043321:+9385 | Msa1463480:CDS |
| GATGAGGCTATTCAGGCACT+TGG | 0.586353 | tig0043321:+4640 | Msa1463480:CDS |
| GTATCAAAGTAGACAAACAT+TGG | 0.587883 | tig0043321:-5792 | Msa1463480:intergenic |
| AAGCTAAGTGAAGATCAAAT+GGG | 0.589572 | tig0043321:+7391 | Msa1463480:CDS |
| CAGAAGTGAGTGCTCGAGCA+AGG | 0.590084 | tig0043321:-6577 | Msa1463480:intergenic |
| TGAAAGGCATTGCAAGCTTG+AGG | 0.590364 | tig0043321:-4969 | Msa1463480:intergenic |
| TTCTCCAACAAATTCACTGG+AGG | 0.591292 | tig0043321:-6298 | Msa1463480:intergenic |
| TGATAACATGAGGCTGCGGA+GGG | 0.592325 | tig0043321:-9051 | Msa1463480:intergenic |
| ACCCGTGTTCTCAATGAAGT+AGG | 0.592530 | tig0043321:-5871 | Msa1463480:intergenic |
| AACATAGTCCAGAGAGACAG+AGG | 0.595054 | tig0043321:-8077 | Msa1463480:intergenic |
| TGATGTGCTTAATGTAACTT+CGG | 0.595798 | tig0043321:+4597 | Msa1463480:CDS |
| GCTGAGTTTGTAAAAGTTAG+GGG | 0.596740 | tig0043321:-7215 | Msa1463480:intergenic |
| GTTGTTGGAAGAGCAACCAT+TGG | 0.600825 | tig0043321:+6542 | Msa1463480:CDS |
| GGCCTACTTCATTGAGAACA+CGG | 0.601237 | tig0043321:+5869 | Msa1463480:CDS |
| AAGGACTATGAGTGATCCAA+TGG | 0.601682 | tig0043321:-6558 | Msa1463480:intergenic |
| CTGGGAGTGAGTGAGTGGTA+TGG | 0.602112 | tig0043321:-2860 | Msa1463480:intergenic |
| TCTTTGGAATGAATCGAGAA+AGG | 0.604792 | tig0043321:-9018 | Msa1463480:intergenic |
| CACTAATTACCATTGCTGAA+AGG | 0.608576 | tig0043321:-4985 | Msa1463480:intergenic |
| TGGGAATTGTGTAGAAAATG+GGG | 0.611214 | tig0043321:+3377 | Msa1463480:exon |
| AGTATATGCTAAGATGAATG+TGG | 0.613347 | tig0043321:+8481 | Msa1463480:CDS |
| GAAGAATGGAAACAAGGCTG+TGG | 0.614177 | tig0043321:+7181 | Msa1463480:CDS |
| TTGTAGGAAGCATATGAGGA+TGG | 0.615497 | tig0043321:+9951 | Msa1463480:intron |
| TGTCAACATTATCTGAGTTG+AGG | 0.616482 | tig0043321:+8546 | Msa1463480:CDS |
| TGTGGCAACTTGAACTACAT+AGG | 0.621551 | tig0043321:-6184 | Msa1463480:intergenic |
| CTTACTGGAAATCGCTAATG+GGG | 0.622795 | tig0043321:+6368 | Msa1463480:CDS |
| ATGTTGTTGGACCCAAGTAA+TGG | 0.623118 | tig0043321:+8095 | Msa1463480:CDS |
| GCTCTTCCAACAACACCAGA+TGG | 0.623254 | tig0043321:-6533 | Msa1463480:intergenic |
| TTGGTTGCCAATCTCTAACA+AGG | 0.624650 | tig0043321:+4659 | Msa1463480:CDS |
| TATAGGCCGTACCATTACTT+GGG | 0.628047 | tig0043321:-8106 | Msa1463480:intergenic |
| GAGTGAGTGAGTGGTATGGT+AGG | 0.629943 | tig0043321:-2856 | Msa1463480:intergenic |
| TAACTTGACAAACTTTACTG+AGG | 0.631465 | tig0043321:+8616 | Msa1463480:CDS |
| TAACCTGACTGTGCTACTGT+CGG | 0.639106 | tig0043321:+8746 | Msa1463480:CDS |
| ATGCTGATAACATGAGGCTG+CGG | 0.639691 | tig0043321:-9055 | Msa1463480:intergenic |
| ATCTCAAAGTTTGACTGATG+TGG | 0.641021 | tig0043321:+7261 | Msa1463480:CDS |
| TGCAGATTAGATCAGGTAGA+CGG | 0.649513 | tig0043321:+6217 | Msa1463480:CDS |
| TCTACCTGATCTAATCTGCA+TGG | 0.651480 | tig0043321:-6214 | Msa1463480:intergenic |
| AATCTGCATGGCTAAAGATG+TGG | 0.656601 | tig0043321:-6202 | Msa1463480:intergenic |
| GTCGCAGAAGAATGGAAACA+AGG | 0.656645 | tig0043321:+7175 | Msa1463480:CDS |
| AATGATGCATACAGACGTAG+AGG | 0.658447 | tig0043321:+6916 | Msa1463480:CDS |
| GCCTACTTCATTGAGAACAC+GGG | 0.662101 | tig0043321:+5870 | Msa1463480:CDS |
| TTACTTGAAAAGCTCCGCAG+AGG | 0.662208 | tig0043321:+7088 | Msa1463480:CDS |
| GTTATATGGGAGAGGCGAAG+TGG | 0.663525 | tig0043321:-9419 | Msa1463480:intergenic |
| GGGAATTGTGTAGAAAATGG+GGG | 0.674893 | tig0043321:+3378 | Msa1463480:exon |
| GATAACATGAGGCTGCGGAG+GGG | 0.679500 | tig0043321:-9050 | Msa1463480:intergenic |
| CACATGAAGTTTCCTCTCTG+CGG | 0.680864 | tig0043321:+6996 | Msa1463480:CDS |
| TCATCACTGATACCCAAGAA+CGG | 0.684971 | tig0043321:-8452 | Msa1463480:intergenic |
| TTGAGTGTAATGGTTCTCGA+AGG | 0.688196 | tig0043321:-9506 | Msa1463480:intergenic |
| GATAGACCTTTGATACGCAG+GGG | 0.700458 | tig0043321:-8242 | Msa1463480:intergenic |
| CGATGCTGACATCAGGACAG+AGG | 0.701480 | tig0043321:+5416 | Msa1463480:CDS |
| ACTGGAGGTAGCAAGTCATG+TGG | 0.701631 | tig0043321:+9381 | Msa1463480:CDS |
| TGGTACCATCTCTGCCTCTG+CGG | 0.705276 | tig0043321:-7102 | Msa1463470:intergenic |
| TTCTGATCAAGAATTGACTG+TGG | 0.705291 | tig0043321:-8804 | Msa1463470:intergenic |
| ATAGACCTTTGATACGCAGG+GGG | 0.716198 | tig0043321:-8241 | Msa1463470:intergenic |
| CATATATCTAGACCGCAGAG+AGG | 0.728704 | tig0043321:-7008 | Msa1463470:intergenic |
| TGTCCAATGCTGATAACATG+AGG | 0.744103 | tig0043321:-9061 | Msa1463470:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAGCAATAAAAAA+AGG | - | tig0043321:3114-3133 | Msa1463480:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTGAGAAT+TGG | - | tig0043321:3754-3773 | Msa1463480:intergenic | 10.0% |
| !! | AATTCTCAAAAAAAAAAAAA+AGG | + | tig0043321:3753-3772 | Msa1463480:intron | 10.0% |
| !! | ATTCTCAAAAAAAAAAAAAA+GGG | + | tig0043321:3754-3773 | Msa1463480:intron | 10.0% |
| !!! | TGAAAATAATTTGTAATAAT+TGG | - | tig0043321:3915-3934 | Msa1463480:intergenic | 10.0% |
| !!! | ATTATTAATTTTTTTTTTGC+AGG | + | tig0043321:6798-6817 | Msa1463480:intron | 10.0% |
| !! | AAAAAAACAGAAAGAAAAAA+AGG | - | tig0043321:2935-2954 | Msa1463480:intergenic | 15.0% |
| !!! | ATTTGTAGTTGAATATATTT+TGG | + | tig0043321:3305-3324 | Msa1463480:intron | 15.0% |
| !! | AATTCAAACACATTAAAAAA+GGG | - | tig0043321:3549-3568 | Msa1463480:intergenic | 15.0% |
| !! | AAATTCAAACACATTAAAAA+AGG | - | tig0043321:3550-3569 | Msa1463480:intergenic | 15.0% |
| !!! | TCATTTTACCAAATTATATA+TGG | + | tig0043321:4000-4019 | Msa1463480:intron | 15.0% |
| !! | AATAAATGAATAAATACCTT+TGG | - | tig0043321:4170-4189 | Msa1463480:intergenic | 15.0% |
| !!! | TTTAATTTTATTCAAAGAAG+AGG | + | tig0043321:4212-4231 | Msa1463480:intron | 15.0% |
| !! | ATAAATAAAGACAATGATAA+GGG | - | tig0043321:5665-5684 | Msa1463480:intergenic | 15.0% |
| !!! | ACTATATTTTGATATTGAAT+TGG | + | tig0043321:7346-7365 | Msa1463480:intron | 15.0% |
| !!! | CTATATTTTGATATTGAATT+GGG | + | tig0043321:7347-7366 | Msa1463480:intron | 15.0% |
| !!! | TTTGAAGATTCAATTTTATT+AGG | - | tig0043321:7674-7693 | Msa1463480:intergenic | 15.0% |
| !! | AAAAAATTATATCATGTTCA+AGG | + | tig0043321:7756-7775 | Msa1463480:intron | 15.0% |
| !!! | TCTTTTTTGATACAATAAAA+AGG | - | tig0043321:8181-8200 | Msa1463480:intergenic | 15.0% |
| !! | TATGAAGAAAAAAAAAAAAG+TGG | - | tig0043321:8662-8681 | Msa1463480:intergenic | 15.0% |
| !! | TCAATAAAAATTGAATTTGA+AGG | - | tig0043321:8921-8940 | Msa1463480:intergenic | 15.0% |
| !! | TAAAGAAAAAATAGAGTAAA+GGG | - | tig0043321:9834-9853 | Msa1463480:intergenic | 15.0% |
| !!! | AGTATTATTTATCACTGTTT+TGG | + | tig0043321:2972-2991 | Msa1463480:intron | 20.0% |
| !! | TAGTATAAAAATCTCCAAAA+GGG | - | tig0043321:3004-3023 | Msa1463480:intergenic | 20.0% |
| !! | ATATAAAATGCAACTAAGAT+GGG | - | tig0043321:3257-3276 | Msa1463480:intergenic | 20.0% |
| !! | AATATAAAATGCAACTAAGA+TGG | - | tig0043321:3258-3277 | Msa1463480:intergenic | 20.0% |
| !!! | TCTTAGTTGCATTTTATATT+TGG | + | tig0043321:3258-3277 | Msa1463480:intron | 20.0% |
| !!! | TAGTTGAATATATTTTGGTT+GGG | + | tig0043321:3310-3329 | Msa1463480:intron | 20.0% |
| !!! | GTTTGAAGTTTGAAATAATT+TGG | + | tig0043321:3332-3351 | Msa1463480:intron | 20.0% |
| !! | ATGTGTTTGAATTTGAAAAT+AGG | + | tig0043321:3556-3575 | Msa1463480:intron | 20.0% |
| !!! | CTAACATTTTGTTTTTCTAT+TGG | - | tig0043321:3673-3692 | Msa1463480:intergenic | 20.0% |
| !! | TAGAAAAACAAAATGTTAGT+AGG | + | tig0043321:3674-3693 | Msa1463480:intron | 20.0% |
| !! | AAAATAACATCAACATAACA+TGG | - | tig0043321:4455-4474 | Msa1463480:intergenic | 20.0% |
| !! | AGTACAATATAACTTTATGT+TGG | - | tig0043321:4523-4542 | Msa1463480:intergenic | 20.0% |
| !!! | TTTATTTCACTACCTTTTTT+TGG | + | tig0043321:5102-5121 | Msa1463480:intron | 20.0% |
| !!! | TAGATTTTTCCAAATTTTCA+TGG | + | tig0043321:5277-5296 | Msa1463480:intron | 20.0% |
| !! | GATAAATAAAGACAATGATA+AGG | - | tig0043321:5666-5685 | Msa1463480:intergenic | 20.0% |
| !! | TGAATATTAATTACCATACA+TGG | + | tig0043321:6014-6033 | Msa1463480:intron | 20.0% |
| !!! | AATTTTTTTTTTGCAGGTAA+TGG | + | tig0043321:6804-6823 | Msa1463480:intron | 20.0% |
| !!! | AAAGAAGTACAGAAAATATA+AGG | - | tig0043321:6958-6977 | Msa1463480:intergenic | 20.0% |
| !! | TTTGATACAATAAAAAGGAA+TGG | - | tig0043321:8176-8195 | Msa1463480:intergenic | 20.0% |
| !!! | TTGATCATTTTTTGTTTTTC+AGG | + | tig0043321:8937-8956 | Msa1463480:intron | 20.0% |
| !! | GTAAAGAAAAAATAGAGTAA+AGG | - | tig0043321:9835-9854 | Msa1463480:intergenic | 20.0% |
| !! | TTGATATCATACTACTAAAT+GGG | - | tig0043321:9860-9879 | Msa1463480:intergenic | 20.0% |
| !! | ATTGATATCATACTACTAAA+TGG | - | tig0043321:9861-9880 | Msa1463480:intergenic | 20.0% |
| !! | AGTAGTATGATATCAATTTA+TGG | + | tig0043321:9864-9883 | Msa1463480:intron | 20.0% |
| !! | TATAAAATGCCTGAAATAAT+TGG | - | tig0043321:9915-9934 | Msa1463480:intergenic | 20.0% |
| ! | GTAGTATAAAAATCTCCAAA+AGG | - | tig0043321:3005-3024 | Msa1463480:intergenic | 25.0% |
| !!! | TTGCTTTATTTATTCCTTTC+TGG | + | tig0043321:3074-3093 | Msa1463480:intron | 25.0% |
| ! | TACTACATAAGTTACAAACA+TGG | - | tig0043321:3157-3176 | Msa1463480:intergenic | 25.0% |
| ! | TAACAGTTGAAATGCAAAAT+AGG | - | tig0043321:3215-3234 | Msa1463480:intergenic | 25.0% |
| !!! | GTAGTTGAATATATTTTGGT+TGG | + | tig0043321:3309-3328 | Msa1463480:intron | 25.0% |
| !! | GTTTTTCTATTGGATCATAA+TGG | - | tig0043321:3663-3682 | Msa1463480:intergenic | 25.0% |
| ! | AATTTGTAATAATTGGCAAG+AGG | - | tig0043321:3908-3927 | Msa1463480:intergenic | 25.0% |
| ! | AGATATGGCCATATATAATT+TGG | - | tig0043321:4011-4030 | Msa1463480:intergenic | 25.0% |
| ! | AATGGTAAAGCAAAAAGATA+TGG | - | tig0043321:4026-4045 | Msa1463480:intergenic | 25.0% |
| ! | ATTGTATAACATGAATACCA+GGG | - | tig0043321:4069-4088 | Msa1463480:intergenic | 25.0% |
| ! | TATTGTATAACATGAATACC+AGG | - | tig0043321:4070-4089 | Msa1463480:intergenic | 25.0% |
| !! | TTGACAATTTTCCTTTCATT+TGG | - | tig0043321:4110-4129 | Msa1463480:intergenic | 25.0% |
| ! | TCATTTATTTCAGTCATGTA+TGG | + | tig0043321:4181-4200 | Msa1463480:intron | 25.0% |
| ! | CATTTATTTCAGTCATGTAT+GGG | + | tig0043321:4182-4201 | Msa1463480:intron | 25.0% |
| !! | AATTTTATTCAAAGAAGAGG+AGG | + | tig0043321:4215-4234 | Msa1463480:intron | 25.0% |
| ! | AGAAATAGTGAACTTAGAAT+TGG | - | tig0043321:4270-4289 | Msa1463480:intergenic | 25.0% |
| ! | TATATTGCTCTTTGCTTATT+TGG | + | tig0043321:4718-4737 | Msa1463480:intron | 25.0% |
| ! | AAGGTAGTGAAATAAACATT+GGG | - | tig0043321:5098-5117 | Msa1463480:intergenic | 25.0% |
| ! | AAAGGTAGTGAAATAAACAT+TGG | - | tig0043321:5099-5118 | Msa1463480:intergenic | 25.0% |
| ! | AAATAAATACCTGGTTAAGA+GGG | - | tig0043321:5562-5581 | Msa1463480:intergenic | 25.0% |
| ! | TAAATAAATACCTGGTTAAG+AGG | - | tig0043321:5563-5582 | Msa1463480:intergenic | 25.0% |
| ! | TCAAATATGCATTCAAAGAT+TGG | + | tig0043321:5725-5744 | Msa1463480:CDS | 25.0% |
| ! | TAAATTCCATACAGTTATGA+AGG | - | tig0043321:5970-5989 | Msa1463480:intergenic | 25.0% |
| ! | TTCATAACTGTATGGAATTT+AGG | + | tig0043321:5969-5988 | Msa1463480:intron | 25.0% |
| !! | TTTTACAGAAAAACCATGTA+TGG | - | tig0043321:6030-6049 | Msa1463480:intergenic | 25.0% |
| ! | CAGAAAAAGGTAAAGATTAA+GGG | - | tig0043321:6083-6102 | Msa1463480:intergenic | 25.0% |
| !! | GATCATTCATAACATTTTTG+TGG | - | tig0043321:6152-6171 | Msa1463480:intergenic | 25.0% |
| !!! | AACTACTGTTTTTTCTTTGT+TGG | + | tig0043321:6448-6467 | Msa1463480:intron | 25.0% |
| !!! | ATTTTTAAGAGAATGTGTCT+TGG | - | tig0043321:6751-6770 | Msa1463480:intergenic | 25.0% |
| ! | ATATTTGAAGGTAAGTTATC+AGG | - | tig0043321:7454-7473 | Msa1463480:intergenic | 25.0% |
| ! | AAAAATAGACTAAGCAGTAA+AGG | - | tig0043321:7590-7609 | Msa1463480:intergenic | 25.0% |
| ! | ATTATATTCACATTGACCTA+CGG | + | tig0043321:7860-7879 | Msa1463480:intron | 25.0% |
| ! | TGTATGATGCTTGTAAATAT+TGG | + | tig0043321:7900-7919 | Msa1463480:intron | 25.0% |
| ! | ACAATAAAAAGGAATGGTTT+GGG | - | tig0043321:8170-8189 | Msa1463480:intergenic | 25.0% |
| ! | TACAATAAAAAGGAATGGTT+TGG | - | tig0043321:8171-8190 | Msa1463480:intergenic | 25.0% |
| ! | AATTGATATTATTCTTCCTC+TGG | + | tig0043321:8207-8226 | Msa1463480:intron | 25.0% |
| ! | TCTATCTTTGTATTATCTGT+TGG | + | tig0043321:8259-8278 | Msa1463480:CDS | 25.0% |
| ! | CTATCTTTGTATTATCTGTT+GGG | + | tig0043321:8260-8279 | Msa1463480:CDS | 25.0% |
| !! | ATGAATCTGATATATTTTGC+AGG | - | tig0043321:8299-8318 | Msa1463480:intergenic | 25.0% |
| !! | ATGAATCAAAGCATTCATTA+TGG | - | tig0043321:8597-8616 | Msa1463480:intergenic | 25.0% |
| !!! | ACGATGTTTATGTTATTTTG+AGG | + | tig0043321:8889-8908 | Msa1463480:intron | 25.0% |
| ! | AGATAATACGATTCAAAGAT+TGG | - | tig0043321:9213-9232 | Msa1463480:intergenic | 25.0% |
| !! | TTTTGCGTAAATAGTCATTT+TGG | + | tig0043321:9617-9636 | Msa1463480:intron | 25.0% |
| !!! | TTGTAATTTTGATGCATTCA+AGG | - | tig0043321:9673-9692 | Msa1463480:intergenic | 25.0% |
| ! | TTAGTCCATCAAATTACTAA+CGG | - | tig0043321:9717-9736 | Msa1463480:intergenic | 25.0% |
| ! | GGAATCATAACAAACATATA+AGG | - | tig0043321:9894-9913 | Msa1463480:intergenic | 25.0% |
| ! | GTTATGATTCCAATTATTTC+AGG | + | tig0043321:9903-9922 | Msa1463480:intron | 25.0% |
| ! | TATGTCTTTCATATTCTTGT+AGG | + | tig0043321:9935-9954 | Msa1463480:intron | 25.0% |
| AACACTTCTCAGTTTCAATT+TGG | + | tig0043321:3184-3203 | Msa1463480:intron | 30.0% | |
| CTGTTATTGAGTATGTTCTT+TGG | + | tig0043321:3229-3248 | Msa1463480:intron | 30.0% | |
| !!! | ACATTTTTTGTTCTCTCAGT+TGG | + | tig0043321:3357-3376 | Msa1463480:intron | 30.0% |
| !!! | CATTTTTTGTTCTCTCAGTT+GGG | + | tig0043321:3358-3377 | Msa1463480:intron | 30.0% |
| TTGGGAATTGTGTAGAAAAT+GGG | + | tig0043321:3376-3395 | Msa1463480:exon | 30.0% | |
| !!! | GGATCATAATGGTTTTGAAA+AGG | - | tig0043321:3652-3671 | Msa1463480:intergenic | 30.0% |
| AAAAAAAAAAAAGGGCAACC+CGG | + | tig0043321:3762-3781 | Msa1463480:intron | 30.0% | |
| ATTGGTTAGAATGACAATAC+AGG | - | tig0043321:3960-3979 | Msa1463480:intergenic | 30.0% | |
| CATGTTATACAATACTTCTC+AGG | + | tig0043321:4076-4095 | Msa1463480:intron | 30.0% | |
| AAATAGGATGTGCTTGAATT+AGG | + | tig0043321:4239-4258 | Msa1463480:intron | 30.0% | |
| TGATGTGCTTAATGTAACTT+CGG | + | tig0043321:4597-4616 | Msa1463480:CDS | 30.0% | |
| CTATTAGATCGATGTATACT+TGG | + | tig0043321:4760-4779 | Msa1463480:intron | 30.0% | |
| CACTCATAACATTGAGAAAT+TGG | + | tig0043321:4883-4902 | Msa1463480:CDS | 30.0% | |
| ! | TTCTGATTTTGCATGTTTTC+TGG | + | tig0043321:5035-5054 | Msa1463480:intron | 30.0% |
| !!! | CATTTTTGCTGATTTTGATG+AGG | + | tig0043321:5154-5173 | Msa1463480:CDS | 30.0% |
| GAGTCAGAATGATTTATATG+AGG | - | tig0043321:5197-5216 | Msa1463480:intergenic | 30.0% | |
| CTATCAATCAAAGAAACACA+CGG | - | tig0043321:5260-5279 | Msa1463480:intergenic | 30.0% | |
| TCAGATTCACCATGAAAATT+TGG | - | tig0043321:5289-5308 | Msa1463480:intergenic | 30.0% | |
| CCAATCATAGTTATCTAAAG+TGG | - | tig0043321:5382-5401 | Msa1463480:intergenic | 30.0% | |
| CCACTTTAGATAACTATGAT+TGG | + | tig0043321:5379-5398 | Msa1463480:CDS | 30.0% | |
| CTCTTGAGTAAATAAATACC+TGG | - | tig0043321:5571-5590 | Msa1463480:intergenic | 30.0% | |
| TAGAGAAGAAATTGAAAAGC+CGG | + | tig0043321:5692-5711 | Msa1463480:intron | 30.0% | |
| AAATTGAAAAGCCGGAAATA+TGG | + | tig0043321:5700-5719 | Msa1463480:CDS | 30.0% | |
| AATTGAAAAGCCGGAAATAT+GGG | + | tig0043321:5701-5720 | Msa1463480:CDS | 30.0% | |
| GTATCAAAGTAGACAAACAT+TGG | - | tig0043321:5795-5814 | Msa1463480:intergenic | 30.0% | |
| TGTTTGTCTACTTTGATACA+AGG | + | tig0043321:5796-5815 | Msa1463480:CDS | 30.0% | |
| GCAATTTATGCAAAAGTAGT+GGG | - | tig0043321:5905-5924 | Msa1463480:intergenic | 30.0% | |
| AGCAATTTATGCAAAAGTAG+TGG | - | tig0043321:5906-5925 | Msa1463480:intergenic | 30.0% | |
| ACAGTTATGAAGGTAAAACA+CGG | - | tig0043321:5960-5979 | Msa1463480:intergenic | 30.0% | |
| ! | GTTTTACCTTCATAACTGTA+TGG | + | tig0043321:5961-5980 | Msa1463480:intron | 30.0% |
| ATCATGCAGAAAAAAATGGA+AGG | - | tig0043321:6053-6072 | Msa1463480:intergenic | 30.0% | |
| !!! | TTCCATTTTTTTCTGCATGA+TGG | + | tig0043321:6052-6071 | Msa1463480:intron | 30.0% |
| TACCATCATGCAGAAAAAAA+TGG | - | tig0043321:6057-6076 | Msa1463480:intergenic | 30.0% | |
| GCAGAAAAAGGTAAAGATTA+AGG | - | tig0043321:6084-6103 | Msa1463480:intergenic | 30.0% | |
| ! | TAATCTTTACCTTTTTCTGC+AGG | + | tig0043321:6084-6103 | Msa1463480:intron | 30.0% |
| ! | AATCTTTACCTTTTTCTGCA+GGG | + | tig0043321:6085-6104 | Msa1463480:intron | 30.0% |
| !! | ACTACATAGGATTTAAGTTG+AGG | - | tig0043321:6174-6193 | Msa1463480:intergenic | 30.0% |
| !! | TTTTTCTTTGTTGGTTGACT+AGG | + | tig0043321:6457-6476 | Msa1463480:intron | 30.0% |
| ! | ACCAGATGGAATATTTTCTA+GGG | - | tig0043321:6522-6541 | Msa1463480:intergenic | 30.0% |
| !! | TATTTTGTTTGTTTGCCTCT+AGG | + | tig0043321:6856-6875 | Msa1463480:intron | 30.0% |
| !! | ATTTTGTTTGTTTGCCTCTA+GGG | + | tig0043321:6857-6876 | Msa1463480:intron | 30.0% |
| TTGTTCATGATGACAAAGAA+AGG | + | tig0043321:7146-7165 | Msa1463480:CDS | 30.0% | |
| TGTTCATGATGACAAAGAAA+GGG | + | tig0043321:7147-7166 | Msa1463480:CDS | 30.0% | |
| AGCTGAGTTTGTAAAAGTTA+GGG | - | tig0043321:7219-7238 | Msa1463480:intergenic | 30.0% | |
| TTGATATTGAATTGGGTTTC+AGG | + | tig0043321:7354-7373 | Msa1463480:intron | 30.0% | |
| TCACTTAGCTTCATAACATA+TGG | - | tig0043321:7382-7401 | Msa1463480:intergenic | 30.0% | |
| AAGCTAAGTGAAGATCAAAT+GGG | + | tig0043321:7391-7410 | Msa1463480:CDS | 30.0% | |
| GCTATAGCTTCAATATTTGA+AGG | - | tig0043321:7466-7485 | Msa1463480:intergenic | 30.0% | |
| !! | GCTAATTGTTTTACGCATAA+AGG | + | tig0043321:7504-7523 | Msa1463480:CDS | 30.0% |
| TTTCTGAATTGAATTCTGTG+TGG | + | tig0043321:7726-7745 | Msa1463480:intron | 30.0% | |
| CATACATGAGTTACAAGTTA+CGG | - | tig0043321:7886-7905 | Msa1463480:intergenic | 30.0% | |
| ATGATGCTTGTAAATATTGG+AGG | + | tig0043321:7903-7922 | Msa1463480:intron | 30.0% | |
| GATTACAGAGAGAACAAAAA+GGG | - | tig0043321:7971-7990 | Msa1463480:intergenic | 30.0% | |
| TGATTACAGAGAGAACAAAA+AGG | - | tig0043321:7972-7991 | Msa1463480:intergenic | 30.0% | |
| CACGTTATGATATTCCATAT+AGG | - | tig0043321:8126-8145 | Msa1463480:intergenic | 30.0% | |
| AGTATATGCTAAGATGAATG+TGG | + | tig0043321:8481-8500 | Msa1463480:CDS | 30.0% | |
| ATAATGTTGACATGGCTAAT+TGG | - | tig0043321:8538-8557 | Msa1463480:intergenic | 30.0% | |
| TAACTTGACAAACTTTACTG+AGG | + | tig0043321:8616-8635 | Msa1463480:CDS | 30.0% | |
| AAGAAAAACCAAGAATGTCA+GGG | - | tig0043321:8695-8714 | Msa1463480:intergenic | 30.0% | |
| !! | ACATTCTTGGTTTTTCTTCT+TGG | + | tig0043321:8697-8716 | Msa1463480:intron | 30.0% |
| !! | TTGGTTTTCTTTTTCTTAGC+TGG | + | tig0043321:8716-8735 | Msa1463480:intron | 30.0% |
| TGGCTATTTGCAACAATTTA+TGG | - | tig0043321:9157-9176 | Msa1463480:intergenic | 30.0% | |
| TAAATTGTTGCAAATAGCCA+TGG | + | tig0043321:9157-9176 | Msa1463480:intron | 30.0% | |
| ! | TGAAAAAGCATATAGCTCAA+CGG | + | tig0043321:9338-9357 | Msa1463480:intron | 30.0% |
| ATCTTCCGTTAGTAATTTGA+TGG | + | tig0043321:9709-9728 | Msa1463480:intron | 30.0% | |
| ! | GTTAGTTTGGAAGAAGATCT+GGG | - | tig0043321:2881-2900 | Msa0839760:intergenic | 35.0% |
| ! | AGTTAGTTTGGAAGAAGATC+TGG | - | tig0043321:2882-2901 | Msa0839760:intergenic | 35.0% |
| GATCTTCTTCCAAACTAACT+TGG | + | tig0043321:2882-2901 | Msa1463480:five_prime_UTR | 35.0% | |
| TTCTTCCAAACTAACTTGGT+AGG | + | tig0043321:2886-2905 | Msa1463480:intron | 35.0% | |
| !! | TTTATTCCTTTCTGGTTCGA+CGG | + | tig0043321:3082-3101 | Msa1463480:intron | 35.0% |
| CAGTTGAAATGCAAAATAGG+AGG | - | tig0043321:3212-3231 | Msa1463480:intergenic | 35.0% | |
| GTTGGGAATTGTGTAGAAAA+TGG | + | tig0043321:3375-3394 | Msa1463480:intron | 35.0% | |
| TGGGAATTGTGTAGAAAATG+GGG | + | tig0043321:3377-3396 | Msa1463480:exon | 35.0% | |
| ! | AGTTTTCTGTAACGTTTGAC+TGG | - | tig0043321:3481-3500 | Msa1463480:intergenic | 35.0% |
| ! | TGATATTTTCCCAAAATCCC+CGG | + | tig0043321:3507-3526 | Msa1463480:CDS | 35.0% |
| !! | TATATTTTTGTACCCCTTCC+CGG | - | tig0043321:3816-3835 | Msa1463480:intergenic | 35.0% |
| ! | AAGCTTGTTCTTCACTGATA+CGG | + | tig0043321:3844-3863 | Msa1463480:intron | 35.0% |
| AACCAATTGATCATGCTTGT+TGG | + | tig0043321:3973-3992 | Msa1463480:intron | 35.0% | |
| !! | TTACCATTGACTTGTTCATG+AGG | + | tig0043321:4038-4057 | Msa1463480:intron | 35.0% |
| ! | ATGCAGCCAAAAATCCTTTT+CGG | + | tig0043321:4141-4160 | Msa1463480:CDS | 35.0% |
| ! | TGGAATCCGAAAAGGATTTT+TGG | - | tig0043321:4150-4169 | Msa1463480:intergenic | 35.0% |
| ! | AAATCCTTTTCGGATTCCAA+AGG | + | tig0043321:4151-4170 | Msa1463480:CDS | 35.0% |
| !! | AATACCTTTGGAATCCGAAA+AGG | - | tig0043321:4158-4177 | Msa1463480:intergenic | 35.0% |
| TCAAAGAAGAGGAGGAAAAT+AGG | + | tig0043321:4223-4242 | Msa1463480:intron | 35.0% | |
| TTACATCTGCGTCTTACAAA+TGG | - | tig0043321:4404-4423 | Msa1463480:intergenic | 35.0% | |
| AGATGAACCTTGTTAGAGAT+TGG | - | tig0043321:4669-4688 | Msa1463480:intergenic | 35.0% | |
| CACTAATTACCATTGCTGAA+AGG | - | tig0043321:4988-5007 | Msa1463480:intergenic | 35.0% | |
| !!! | TTTCACTACCTTTTTTTGGC+AGG | + | tig0043321:5106-5125 | Msa1463480:intron | 35.0% |
| ATGGCAGTTTCAAAATGGTT+GGG | - | tig0043321:5233-5252 | Msa1463480:intergenic | 35.0% | |
| AATGGCAGTTTCAAAATGGT+TGG | - | tig0043321:5234-5253 | Msa1463480:intergenic | 35.0% | |
| GCATAATGGCAGTTTCAAAA+TGG | - | tig0043321:5238-5257 | Msa1463480:intergenic | 35.0% | |
| TCATCATAATTGGGTGAATG+AGG | + | tig0043321:5440-5459 | Msa1463480:CDS | 35.0% | |
| GCTAAAAAAGGCCTATTGAT+CGG | - | tig0043321:5594-5613 | Msa1463480:intergenic | 35.0% | |
| CATATTTGAGCCCATATTTC+CGG | - | tig0043321:5714-5733 | Msa1463480:intergenic | 35.0% | |
| ! | AAGATTGGTTGAATTAGCCA+AGG | + | tig0043321:5740-5759 | Msa1463480:CDS | 35.0% |
| TTGCATAAATTGCTTTGCAG+CGG | + | tig0043321:5912-5931 | Msa1463480:intron | 35.0% | |
| !!! | TTAGCAGAGATTGGTTTTGT+TGG | + | tig0043321:6240-6259 | Msa1463480:CDS | 35.0% |
| TTGTTCTCCAACAAATTCAC+TGG | - | tig0043321:6304-6323 | Msa1463480:intergenic | 35.0% | |
| AGCAATTCTCAATGGAACTT+TGG | - | tig0043321:6350-6369 | Msa1463480:intergenic | 35.0% | |
| TTCCATTGAGAATTGCTTAC+TGG | + | tig0043321:6353-6372 | Msa1463480:CDS | 35.0% | |
| TTCCAGTAAGCAATTCTCAA+TGG | - | tig0043321:6358-6377 | Msa1463480:intergenic | 35.0% | |
| ATTGCCATCAAGTCAAATAG+TGG | - | tig0043321:6497-6516 | Msa1463480:intergenic | 35.0% | |
| ACCCTAGAAAATATTCCATC+TGG | + | tig0043321:6518-6537 | Msa1463480:CDS | 35.0% | |
| ! | CACCAGATGGAATATTTTCT+AGG | - | tig0043321:6523-6542 | Msa1463480:intergenic | 35.0% |
| !! | AATATTCCATCTGGTGTTGT+TGG | + | tig0043321:6527-6546 | Msa1463480:CDS | 35.0% |
| ! | ATTTGAAGTACAACGACTGT+TGG | - | tig0043321:6660-6679 | Msa1463480:intergenic | 35.0% |
| GACACAGCTACTAAAATGTT+TGG | - | tig0043321:6688-6707 | Msa1463480:intergenic | 35.0% | |
| AGCTGTGTCAATAATATCTG+AGG | + | tig0043321:6699-6718 | Msa1463480:intron | 35.0% | |
| TTTAAGAGAATGTGTCTTGG+TGG | - | tig0043321:6748-6767 | Msa1463480:intergenic | 35.0% | |
| ATATGGATCAGCGCAATAAA+AGG | + | tig0043321:7026-7045 | Msa1463480:CDS | 35.0% | |
| GCTGAGTTTGTAAAAGTTAG+GGG | - | tig0043321:7218-7237 | Msa1463480:intergenic | 35.0% | |
| GAGCTGAGTTTGTAAAAGTT+AGG | - | tig0043321:7220-7239 | Msa1463480:intergenic | 35.0% | |
| AACTCAGCTCAATCATTGAT+AGG | + | tig0043321:7230-7249 | Msa1463480:CDS | 35.0% | |
| ACTCAGCTCAATCATTGATA+GGG | + | tig0043321:7231-7250 | Msa1463480:CDS | 35.0% | |
| ATCTCAAAGTTTGACTGATG+TGG | + | tig0043321:7261-7280 | Msa1463480:CDS | 35.0% | |
| GAAGCTAAGTGAAGATCAAA+TGG | + | tig0043321:7390-7409 | Msa1463480:CDS | 35.0% | |
| !! | AAGATTGGCTTGAATCCAAA+AGG | - | tig0043321:7431-7450 | Msa1463480:intergenic | 35.0% |
| AGGTAAGTTATCAGGAAGAT+TGG | - | tig0043321:7446-7465 | Msa1463480:intergenic | 35.0% | |
| !!! | GCATAAAGGTAGTTTTGTCT+GGG | + | tig0043321:7518-7537 | Msa1463480:intron | 35.0% |
| ! | TATTGGAGGCTCATTTTCAT+AGG | + | tig0043321:7917-7936 | Msa1463480:intron | 35.0% |
| ! | CCAGGTTATCTTTGTCTTTT+AGG | - | tig0043321:8037-8056 | Msa1463480:intergenic | 35.0% |
| CCTAAAAGACAAAGATAACC+TGG | + | tig0043321:8034-8053 | Msa1463480:CDS | 35.0% | |
| ! | GTTAGCAAAATCTGAAGTGA+GGG | + | tig0043321:8342-8361 | Msa1463480:intron | 35.0% |
| AATGTGGATTTGAGAGAGTA+TGG | + | tig0043321:8497-8516 | Msa1463480:CDS | 35.0% | |
| CAACTCAGATAATGTTGACA+TGG | - | tig0043321:8546-8565 | Msa1463480:intergenic | 35.0% | |
| TGTCAACATTATCTGAGTTG+AGG | + | tig0043321:8546-8565 | Msa1463480:CDS | 35.0% | |
| ! | TCAAAGCATTCATTATGGTC+TGG | - | tig0043321:8592-8611 | Msa1463480:intergenic | 35.0% |
| GAAGAAAAACCAAGAATGTC+AGG | - | tig0043321:8696-8715 | Msa1463480:intergenic | 35.0% | |
| TTCTGATCAAGAATTGACTG+TGG | - | tig0043321:8807-8826 | Msa1463480:intergenic | 35.0% | |
| TTATTCTCAAGAGTCGTTGT+CGG | + | tig0043321:8839-8858 | Msa1463480:CDS | 35.0% | |
| !! | TCTTTGGAATGAATCGAGAA+AGG | - | tig0043321:9021-9040 | Msa1463480:intergenic | 35.0% |
| ! | TATCAGCATTGGACAACTTA+TGG | + | tig0043321:9069-9088 | Msa1463480:CDS | 35.0% |
| CATTGGACAACTTATGGAAT+CGG | + | tig0043321:9075-9094 | Msa1463480:CDS | 35.0% | |
| GAAGAAGCTTTCAAATTGGT+TGG | + | tig0043321:9483-9502 | Msa1463480:CDS | 35.0% | |
| TATCAGGTGATTGAGTGTAA+TGG | - | tig0043321:9519-9538 | Msa1463480:intergenic | 35.0% | |
| !!! | CATTTTGGTTCCTAAATGTG+AGG | + | tig0043321:9632-9651 | Msa1463480:intron | 35.0% |
| ACTAACGGAAGATAGATTTG+AGG | - | tig0043321:9702-9721 | Msa1463480:intergenic | 35.0% | |
| ! | TTTTGGTCCATGAATGTGTA+TGG | - | tig0043321:9808-9827 | Msa1463480:intergenic | 35.0% |
| TACACATTCATGGACCAAAA+TGG | + | tig0043321:9808-9827 | Msa1463480:intron | 35.0% | |
| ! | AATAGAGTAAAGGGCCATTT+TGG | - | tig0043321:9825-9844 | Msa1463480:intergenic | 35.0% |
| ! | ATTCTTGTAGGAAGCATATG+AGG | + | tig0043321:9947-9966 | Msa1463480:intron | 35.0% |
| ! | AGAAGGTTGTTGTTCAGGAA+TGG | - | tig0043321:2833-2852 | Msa0839760:intergenic | 40.0% |
| GTAGTCCTACCAAGTTAGTT+TGG | - | tig0043321:2894-2913 | Msa1463480:intergenic | 40.0% | |
| GGGAATTGTGTAGAAAATGG+GGG | + | tig0043321:3378-3397 | Msa1463480:exon | 40.0% | |
| TTGAATGTAACCACGTGTGT+TGG | + | tig0043321:3584-3603 | Msa1463480:intron | 40.0% | |
| ! | GCTGTGTTATTCTCATTGCA+AGG | + | tig0043321:3715-3734 | Msa1463480:intron | 40.0% |
| CACCAACAAGCATGATCAAT+TGG | - | tig0043321:3978-3997 | Msa1463480:intergenic | 40.0% | |
| CAACCTCATGAACAAGTCAA+TGG | - | tig0043321:4044-4063 | Msa1463480:intergenic | 40.0% | |
| AGGATGAGCTTCCAAATGAA+AGG | + | tig0043321:4096-4115 | Msa1463480:intron | 40.0% | |
| TAATGTAACTTCGGAGCTCT+TGG | + | tig0043321:4606-4625 | Msa1463480:CDS | 40.0% | |
| TTGGTTGCCAATCTCTAACA+AGG | + | tig0043321:4659-4678 | Msa1463480:CDS | 40.0% | |
| AACAAGGTTCATCTACTGTC+AGG | + | tig0043321:4675-4694 | Msa1463480:CDS | 40.0% | |
| CTGCACATTCATTGTGTAAG+TGG | - | tig0043321:4849-4868 | Msa1463480:intergenic | 40.0% | |
| CACTTACACAATGAATGTGC+AGG | + | tig0043321:4847-4866 | Msa1463480:intron | 40.0% | |
| ! | GAAAGTATGCATGCTATCAC+AGG | + | tig0043321:4910-4929 | Msa1463480:CDS | 40.0% |
| ! | CCTCAAACAGCAGTTTTCAT+GGG | - | tig0043321:4948-4967 | Msa1463480:intergenic | 40.0% |
| ! | CCATGAAAACTGCTGTTTGA+GGG | + | tig0043321:4946-4965 | Msa1463480:CDS | 40.0% |
| !!! | CTACCTTTTTTTGGCAGGTT+TGG | + | tig0043321:5111-5130 | Msa1463480:intron | 40.0% |
| GAACCAAACCTGCCAAAAAA+AGG | - | tig0043321:5117-5136 | Msa1463480:intergenic | 40.0% | |
| CAAAGAAACACACGGCATAA+TGG | - | tig0043321:5252-5271 | Msa1463480:intergenic | 40.0% | |
| GACAGAGGCTCATCATAATT+GGG | + | tig0043321:5431-5450 | Msa1463480:CDS | 40.0% | |
| AAATACCTGGTTAAGAGGGA+AGG | - | tig0043321:5558-5577 | Msa1463480:intergenic | 40.0% | |
| TTACTCAAGAGCCGATCAAT+AGG | + | tig0043321:5580-5599 | Msa1463480:intron | 40.0% | |
| ACTTTGATACAAGGCAACAC+TGG | + | tig0043321:5805-5824 | Msa1463480:CDS | 40.0% | |
| CTTTGATACAAGGCAACACT+GGG | + | tig0043321:5806-5825 | Msa1463480:CDS | 40.0% | |
| ! | TCCTCAAAATGGTTTGGCAA+TGG | + | tig0043321:5830-5849 | Msa1463480:CDS | 40.0% |
| ! | ACCATTGCCAAACCATTTTG+AGG | - | tig0043321:5834-5853 | Msa1463480:intergenic | 40.0% |
| ! | TCAAAATGGTTTGGCAATGG+TGG | + | tig0043321:5833-5852 | Msa1463480:CDS | 40.0% |
| ! | CTTTTTCTGCAGGGAATCAA+CGG | + | tig0043321:6094-6113 | Msa1463480:intron | 40.0% |
| TGTGGCAACTTGAACTACAT+AGG | - | tig0043321:6187-6206 | Msa1463480:intergenic | 40.0% | |
| AATCTGCATGGCTAAAGATG+TGG | - | tig0043321:6205-6224 | Msa1463480:intergenic | 40.0% | |
| TTAGCCATGCAGATTAGATC+AGG | + | tig0043321:6210-6229 | Msa1463480:CDS | 40.0% | |
| TCTACCTGATCTAATCTGCA+TGG | - | tig0043321:6217-6236 | Msa1463480:intergenic | 40.0% | |
| TGCAGATTAGATCAGGTAGA+CGG | + | tig0043321:6217-6236 | Msa1463480:CDS | 40.0% | |
| TTCTCCAACAAATTCACTGG+AGG | - | tig0043321:6301-6320 | Msa1463480:intergenic | 40.0% | |
| TGCTTACTGGAAATCGCTAA+TGG | + | tig0043321:6366-6385 | Msa1463480:CDS | 40.0% | |
| GCTTACTGGAAATCGCTAAT+GGG | + | tig0043321:6367-6386 | Msa1463480:CDS | 40.0% | |
| CTTACTGGAAATCGCTAATG+GGG | + | tig0043321:6368-6387 | Msa1463480:CDS | 40.0% | |
| AAGGACTATGAGTGATCCAA+TGG | - | tig0043321:6561-6580 | Msa1463480:intergenic | 40.0% | |
| AGTTGCATGAGAAGAGATTC+AGG | - | tig0043321:6887-6906 | Msa1463480:intergenic | 40.0% | |
| AATGATGCATACAGACGTAG+AGG | + | tig0043321:6916-6935 | Msa1463480:CDS | 40.0% | |
| TCATGTGTATGGAAGGAACT+TGG | - | tig0043321:6983-7002 | Msa1463480:intergenic | 40.0% | |
| GGAAACTTCATGTGTATGGA+AGG | - | tig0043321:6990-7009 | Msa1463480:intergenic | 40.0% | |
| GAGAGGAAACTTCATGTGTA+TGG | - | tig0043321:6994-7013 | Msa1463480:intergenic | 40.0% | |
| TCAATCATTGATAGGGCTAC+AGG | + | tig0043321:7238-7257 | Msa1463480:CDS | 40.0% | |
| GAGTAGCTGAATTGATCTGT+CGG | + | tig0043321:7285-7304 | Msa1463480:intron | 40.0% | |
| !!! | CGCATAAAGGTAGTTTTGTC+TGG | + | tig0043321:7517-7536 | Msa1463480:intron | 40.0% |
| !! | AATTGTTTTTCGAACCCGAG+TGG | + | tig0043321:7559-7578 | Msa1463480:intron | 40.0% |
| ATGTTGTTGGACCCAAGTAA+TGG | + | tig0043321:8095-8114 | Msa1463480:CDS | 40.0% | |
| TATAGGCCGTACCATTACTT+GGG | - | tig0043321:8109-8128 | Msa1463480:intergenic | 40.0% | |
| ATATAGGCCGTACCATTACT+TGG | - | tig0043321:8110-8129 | Msa1463480:intergenic | 40.0% | |
| AAGTAATGGTACGGCCTATA+TGG | + | tig0043321:8109-8128 | Msa1463480:intron | 40.0% | |
| GATATTATTCTTCCTCTGGC+AGG | + | tig0043321:8211-8230 | Msa1463480:intron | 40.0% | |
| AGATAGACCTTTGATACGCA+GGG | - | tig0043321:8246-8265 | Msa1463480:intergenic | 40.0% | |
| AAGATAGACCTTTGATACGC+AGG | - | tig0043321:8247-8266 | Msa1463480:intergenic | 40.0% | |
| TGTATTATCTGTTGGGATGC+TGG | + | tig0043321:8267-8286 | Msa1463480:CDS | 40.0% | |
| ! | CGTTAGCAAAATCTGAAGTG+AGG | + | tig0043321:8341-8360 | Msa1463480:intron | 40.0% |
| CTTTCTGCTTCCATATAACC+AGG | + | tig0043321:8424-8443 | Msa1463480:intron | 40.0% | |
| AACGGATCAACCTGGTTATA+TGG | - | tig0043321:8437-8456 | Msa1463480:intergenic | 40.0% | |
| TCATCACTGATACCCAAGAA+CGG | - | tig0043321:8455-8474 | Msa1463480:intergenic | 40.0% | |
| CCAAACACAAAGTCTTCATC+AGG | - | tig0043321:8783-8802 | Msa1463480:intergenic | 40.0% | |
| CCTGATGAAGACTTTGTGTT+TGG | + | tig0043321:8780-8799 | Msa1463480:CDS | 40.0% | |
| ! | CAGGATTTTCCCTCAAATTC+AGG | + | tig0043321:8956-8975 | Msa1463480:intron | 40.0% |
| ! | GATTTTCCCTCAAATTCAGG+AGG | + | tig0043321:8959-8978 | Msa1463480:CDS | 40.0% |
| TCTTCACCTCCTGAATTTGA+GGG | - | tig0043321:8968-8987 | Msa1463480:intergenic | 40.0% | |
| ATCTTCACCTCCTGAATTTG+AGG | - | tig0043321:8969-8988 | Msa1463480:intergenic | 40.0% | |
| TGTCCAATGCTGATAACATG+AGG | - | tig0043321:9064-9083 | Msa1463480:intergenic | 40.0% | |
| ! | AATGCAGATTCAGAGTACCA+TGG | - | tig0043321:9177-9196 | Msa1463480:intergenic | 40.0% |
| ! | GACTAGCCATAGCGTTATAT+GGG | - | tig0043321:9435-9454 | Msa1463480:intergenic | 40.0% |
| ! | TGACTAGCCATAGCGTTATA+TGG | - | tig0043321:9436-9455 | Msa1463480:intergenic | 40.0% |
| CACGGAAGAAGCTTTCAAAT+TGG | + | tig0043321:9479-9498 | Msa1463480:CDS | 40.0% | |
| TTGAGTGTAATGGTTCTCGA+AGG | - | tig0043321:9509-9528 | Msa1463480:intergenic | 40.0% | |
| ATCACCTGATAAGTCGTTTC+TGG | + | tig0043321:9528-9547 | Msa1463480:CDS | 40.0% | |
| AGTGACACAACCTCACATTT+AGG | - | tig0043321:9645-9664 | Msa1463480:intergenic | 40.0% | |
| GATAACGCCATACACATTCA+TGG | + | tig0043321:9798-9817 | Msa1463480:intron | 40.0% | |
| ! | TTGTAGGAAGCATATGAGGA+TGG | + | tig0043321:9951-9970 | Msa1463480:intron | 40.0% |
| ! | GGTGAAGAAGGTTGTTGTTC+AGG | - | tig0043321:2838-2857 | Msa0839760:intergenic | 45.0% |
| AGTGGTATGGTAGGTGAAGA+AGG | - | tig0043321:2850-2869 | Msa0839760:intergenic | 45.0% | |
| !!! | TGTTTTGGTCACTGCCCTTT+TGG | + | tig0043321:2987-3006 | Msa1463480:intron | 45.0% |
| AGAAAACCGTCGAACCAGAA+AGG | - | tig0043321:3091-3110 | Msa1463480:intergenic | 45.0% | |
| AGAAAATGGGGGTCATCTCA+AGG | + | tig0043321:3389-3408 | Msa1463480:exon | 45.0% | |
| CTTGATCTTGACCTCAAAGC+AGG | - | tig0043321:3454-3473 | Msa1463480:intergenic | 45.0% | |
| TAACCACGTGTGTTGGACAT+TGG | + | tig0043321:3591-3610 | Msa1463480:intron | 45.0% | |
| TTGTTCATGAGGTTGAACCC+TGG | + | tig0043321:4049-4068 | Msa1463480:intron | 45.0% | |
| CTTGGACTATTCCAAGGATG+AGG | + | tig0043321:4624-4643 | Msa1463480:CDS | 45.0% | |
| TTCCAAGGATGAGGCTATTC+AGG | + | tig0043321:4633-4652 | Msa1463480:CDS | 45.0% | |
| ! | CAGTTTTCATGGGTTTCACC+AGG | - | tig0043321:4938-4957 | Msa1463480:intergenic | 45.0% |
| ! | CCCATGAAAACTGCTGTTTG+AGG | + | tig0043321:4945-4964 | Msa1463480:CDS | 45.0% |
| ! | CCCTCAAACAGCAGTTTTCA+TGG | - | tig0043321:4949-4968 | Msa1463480:intergenic | 45.0% |
| !! | TGAAAGGCATTGCAAGCTTG+AGG | - | tig0043321:4972-4991 | Msa1463480:intergenic | 45.0% |
| CTTGCAATGCCTTTCAGCAA+TGG | + | tig0043321:4976-4995 | Msa1463480:CDS | 45.0% | |
| AAAGTGACGATGCTGACATC+AGG | + | tig0043321:5409-5428 | Msa1463480:CDS | 45.0% | |
| GGACAGAGGCTCATCATAAT+TGG | + | tig0043321:5430-5449 | Msa1463480:CDS | 45.0% | |
| AGGGAAGGATCCTTTACTTC+TGG | - | tig0043321:5543-5562 | Msa1463480:intergenic | 45.0% | |
| GCAGCTGTAGCAGCTAAAAA+AGG | - | tig0043321:5606-5625 | Msa1463480:intergenic | 45.0% | |
| ACGCATAGTTGTGCTTTCCT+TGG | - | tig0043321:5760-5779 | Msa1463480:intergenic | 45.0% | |
| CACAACTATGCGTCGTGTAT+TGG | + | tig0043321:5767-5786 | Msa1463480:CDS | 45.0% | |
| !!! | AATGGTGGTTTTGTCGAGGA+TGG | + | tig0043321:5848-5867 | Msa1463480:CDS | 45.0% |
| GGCCTACTTCATTGAGAACA+CGG | + | tig0043321:5869-5888 | Msa1463480:CDS | 45.0% | |
| GCCTACTTCATTGAGAACAC+GGG | + | tig0043321:5870-5889 | Msa1463480:CDS | 45.0% | |
| ACCCGTGTTCTCAATGAAGT+AGG | - | tig0043321:5874-5893 | Msa1463480:intergenic | 45.0% | |
| !! | CGTTGATTCCCTGCAGAAAA+AGG | - | tig0043321:6096-6115 | Msa1463480:intergenic | 45.0% |
| AGCTTCTGTGATACATCAGC+TGG | + | tig0043321:6125-6144 | Msa1463480:CDS | 45.0% | |
| ! | TTTTCCGGAGATGTCTGCAA+AGG | - | tig0043321:6269-6288 | Msa1463480:intergenic | 45.0% |
| ACATCTCCGGAAAAGTTTCC+AGG | + | tig0043321:6275-6294 | Msa1463480:CDS | 45.0% | |
| !! | GCAGCCACTATTTGACTTGA+TGG | + | tig0043321:6490-6509 | Msa1463480:CDS | 45.0% |
| GTTGTTGGAAGAGCAACCAT+TGG | + | tig0043321:6542-6561 | Msa1463480:CDS | 45.0% | |
| GAGATTCAGGAAATCCCTAG+AGG | - | tig0043321:6874-6893 | Msa1463480:intergenic | 45.0% | |
| CACATGAAGTTTCCTCTCTG+CGG | + | tig0043321:6996-7015 | Msa1463480:CDS | 45.0% | |
| CATATATCTAGACCGCAGAG+AGG | - | tig0043321:7011-7030 | Msa1463480:intergenic | 45.0% | |
| CTCTCTGCGGTCTAGATATA+TGG | + | tig0043321:7009-7028 | Msa1463480:CDS | 45.0% | |
| TTACTTGAAAAGCTCCGCAG+AGG | + | tig0043321:7088-7107 | Msa1463480:CDS | 45.0% | |
| GTACCAATGCTGCAGATCAT+GGG | + | tig0043321:7119-7138 | Msa1463480:CDS | 45.0% | |
| ATTCCCATGATCTGCAGCAT+TGG | - | tig0043321:7125-7144 | Msa1463480:intergenic | 45.0% | |
| GTCGCAGAAGAATGGAAACA+AGG | + | tig0043321:7175-7194 | Msa1463480:CDS | 45.0% | |
| GAAGAATGGAAACAAGGCTG+TGG | + | tig0043321:7181-7200 | Msa1463480:CDS | 45.0% | |
| TCCAAAAGGCAGAAAGAAGC+TGG | - | tig0043321:7417-7436 | Msa1463480:intergenic | 45.0% | |
| CAGTAAAGGTGAAACCACTC+GGG | - | tig0043321:7576-7595 | Msa1463480:intergenic | 45.0% | |
| GCAGTAAAGGTGAAACCACT+CGG | - | tig0043321:7577-7596 | Msa1463480:intergenic | 45.0% | |
| AACATAGTCCAGAGAGACAG+AGG | - | tig0043321:8080-8099 | Msa1463480:intergenic | 45.0% | |
| GTCTCTCTGGACTATGTTGT+TGG | + | tig0043321:8082-8101 | Msa1463480:CDS | 45.0% | |
| GTTGGACCCAAGTAATGGTA+CGG | + | tig0043321:8100-8119 | Msa1463480:intron | 45.0% | |
| ATAGACCTTTGATACGCAGG+GGG | - | tig0043321:8244-8263 | Msa1463480:intergenic | 45.0% | |
| GATAGACCTTTGATACGCAG+GGG | - | tig0043321:8245-8264 | Msa1463480:intergenic | 45.0% | |
| ACGATGTGAGCACATCATTC+AGG | - | tig0043321:8324-8343 | Msa1463480:intergenic | 45.0% | |
| !! | TAACCAGGTTGATCCGTTCT+TGG | + | tig0043321:8439-8458 | Msa1463480:intron | 45.0% |
| !! | AACCAGGTTGATCCGTTCTT+GGG | + | tig0043321:8440-8459 | Msa1463480:intron | 45.0% |
| TTTCAGCACCCTGACATTCT+TGG | + | tig0043321:8684-8703 | Msa1463480:intron | 45.0% | |
| ! | TAACCTGACTGTGCTACTGT+CGG | + | tig0043321:8746-8765 | Msa1463480:CDS | 45.0% |
| ATGCTGATAACATGAGGCTG+CGG | - | tig0043321:9058-9077 | Msa1463480:intergenic | 45.0% | |
| CAGCCTCATGTTATCAGCAT+TGG | + | tig0043321:9058-9077 | Msa1463480:CDS | 45.0% | |
| CTAGTCAGTGTGAATCGCTT+GGG | + | tig0043321:9449-9468 | Msa1463480:CDS | 45.0% | |
| AATCGCTTGGGACATGTTCA+CGG | + | tig0043321:9461-9480 | Msa1463480:CDS | 45.0% | |
| AAGGCCAGAAACGACTTATC+AGG | - | tig0043321:9535-9554 | Msa1463480:intergenic | 45.0% | |
| TGCGTTACTGTTACGAGCAA+AGG | - | tig0043321:9554-9573 | Msa1463480:intergenic | 45.0% | |
| CAGTAACGCAGCACTTGAAA+AGG | + | tig0043321:9564-9583 | Msa1463480:CDS | 45.0% | |
| !! | AAAAAACAATAAAATTTAAT+AGG | + | tig0043321:9299-9318 | Msa1463480:intron | 5.0% |
| GAGTGAGTGAGTGGTATGGT+AGG | - | tig0043321:2859-2878 | Msa0839760:intergenic | 50.0% | |
| AAGATCTGGGAGTGAGTGAG+TGG | - | tig0043321:2868-2887 | Msa0839760:intergenic | 50.0% | |
| CACACATGCTCTCACAAGCT+GGG | - | tig0043321:3423-3442 | Msa1463480:intergenic | 50.0% | |
| ACACACATGCTCTCACAAGC+TGG | - | tig0043321:3424-3443 | Msa1463480:intergenic | 50.0% | |
| !! | GTGTTTGCTGTCCTGCTTTG+AGG | + | tig0043321:3440-3459 | Msa1463480:CDS | 50.0% |
| ! | ACACACGAACCGGGGATTTT+GGG | - | tig0043321:3519-3538 | Msa1463480:intergenic | 50.0% |
| ! | AACACACGAACCGGGGATTT+TGG | - | tig0043321:3520-3539 | Msa1463480:intergenic | 50.0% |
| GTACGATAACACACGAACCG+GGG | - | tig0043321:3527-3546 | Msa1463480:intergenic | 50.0% | |
| GGTACGATAACACACGAACC+GGG | - | tig0043321:3528-3547 | Msa1463480:intergenic | 50.0% | |
| GGGTACGATAACACACGAAC+CGG | - | tig0043321:3529-3548 | Msa1463480:intergenic | 50.0% | |
| TGTCCAATGTCCAACACACG+TGG | - | tig0043321:3597-3616 | Msa1463480:intergenic | 50.0% | |
| AAGAGGAGTGACTGCAGGTA+GGG | - | tig0043321:3891-3910 | Msa1463480:intergenic | 50.0% | |
| GGAGCTCTTGGACTATTCCA+AGG | + | tig0043321:4618-4637 | Msa1463480:CDS | 50.0% | |
| TGCCTGAATAGCCTCATCCT+TGG | - | tig0043321:4638-4657 | Msa1463480:intergenic | 50.0% | |
| GATGAGGCTATTCAGGCACT+TGG | + | tig0043321:4640-4659 | Msa1463480:CDS | 50.0% | |
| AGGTTGTCCGTAGTGAAAGC+CGG | + | tig0043321:5460-5479 | Msa1463480:CDS | 50.0% | |
| TACCAACAACTGAACCAGCC+CGG | - | tig0043321:5482-5501 | Msa1463480:intergenic | 50.0% | |
| CCTTTACTTCTGGTCGTGGT+TGG | - | tig0043321:5533-5552 | Msa1463480:intergenic | 50.0% | |
| CCAACCACGACCAGAAGTAA+AGG | + | tig0043321:5530-5549 | Msa1463480:CDS | 50.0% | |
| GGATCCTTTACTTCTGGTCG+TGG | - | tig0043321:5537-5556 | Msa1463480:intergenic | 50.0% | |
| AGGATCCTTCCCTCTTAACC+AGG | + | tig0043321:5550-5569 | Msa1463480:CDS | 50.0% | |
| CAACACTGGGCTCCTCAAAA+TGG | + | tig0043321:5819-5838 | Msa1463480:CDS | 50.0% | |
| CTGGGCTCCTCAAAATGGTT+TGG | + | tig0043321:5824-5843 | Msa1463480:CDS | 50.0% | |
| !!! | TGGCAATGGTGGTTTTGTCG+AGG | + | tig0043321:5844-5863 | Msa1463480:CDS | 50.0% |
| GGTAGACGGTTAGCAGAGAT+TGG | + | tig0043321:6231-6250 | Msa1463480:CDS | 50.0% | |
| GTGACCTTTGCAGACATCTC+CGG | + | tig0043321:6262-6281 | Msa1463480:CDS | 50.0% | |
| ! | TGGAGGCCTGGAAACTTTTC+CGG | - | tig0043321:6284-6303 | Msa1463480:intergenic | 50.0% |
| CAACAAATTCACTGGAGGCC+TGG | - | tig0043321:6296-6315 | Msa1463480:intergenic | 50.0% | |
| CAGGCCTCCAGTGAATTTGT+TGG | + | tig0043321:6294-6313 | Msa1463480:CDS | 50.0% | |
| GCTCTTCCAACAACACCAGA+TGG | - | tig0043321:6536-6555 | Msa1463480:intergenic | 50.0% | |
| TCGAGCACTCACTTCTGCAT+TGG | + | tig0043321:6583-6602 | Msa1463480:CDS | 50.0% | |
| ACAGACGTAGAGGCTCGTAT+TGG | + | tig0043321:6926-6945 | Msa1463480:CDS | 50.0% | |
| GGTACCAATGCTGCAGATCA+TGG | + | tig0043321:7118-7137 | Msa1463480:CDS | 50.0% | |
| GGGATACAGTCGCAGAAGAA+TGG | + | tig0043321:7167-7186 | Msa1463480:CDS | 50.0% | |
| ! | GCCAGCTTCTTTCTGCCTTT+TGG | + | tig0043321:7413-7432 | Msa1463480:CDS | 50.0% |
| GAGTTACAAGTTACGGCCGT+AGG | - | tig0043321:7879-7898 | Msa1463480:intergenic | 50.0% | |
| ACAGAGGAAGCTGGAAGAAG+CGG | - | tig0043321:8064-8083 | Msa1463480:intergenic | 50.0% | |
| TACCCAAGAACGGATCAACC+TGG | - | tig0043321:8445-8464 | Msa1463480:intergenic | 50.0% | |
| ! | AGAGTCGTTGTCGGTTGATG+AGG | + | tig0043321:8848-8867 | Msa1463480:CDS | 50.0% |
| TGATAACATGAGGCTGCGGA+GGG | - | tig0043321:9054-9073 | Msa1463480:intergenic | 50.0% | |
| ACTGGAGGTAGCAAGTCATG+TGG | + | tig0043321:9381-9400 | Msa1463480:CDS | 50.0% | |
| GTTATATGGGAGAGGCGAAG+TGG | - | tig0043321:9422-9441 | Msa1463480:intergenic | 50.0% | |
| GCCTCTCCCATATAACGCTA+TGG | + | tig0043321:9426-9445 | Msa1463480:CDS | 50.0% | |
| GCCATAGCGTTATATGGGAG+AGG | - | tig0043321:9430-9449 | Msa1463480:intergenic | 50.0% | |
| GCTAGTCAGTGTGAATCGCT+TGG | + | tig0043321:9448-9467 | Msa1463480:CDS | 50.0% | |
| CTGGGAGTGAGTGAGTGGTA+TGG | - | tig0043321:2863-2882 | Msa0839760:intergenic | 55.0% | |
| AGAGGAGTGACTGCAGGTAG+GGG | - | tig0043321:3890-3909 | Msa1463480:intergenic | 55.0% | |
| CAAGAGGAGTGACTGCAGGT+AGG | - | tig0043321:3892-3911 | Msa1463480:intergenic | 55.0% | |
| TTGGCAAGAGGAGTGACTGC+AGG | - | tig0043321:3896-3915 | Msa1463480:intergenic | 55.0% | |
| TGCATGCTATCACAGGAGCC+TGG | + | tig0043321:4917-4936 | Msa1463480:CDS | 55.0% | |
| CGATGCTGACATCAGGACAG+AGG | + | tig0043321:5416-5435 | Msa1463480:CDS | 55.0% | |
| GGTTGTCCGTAGTGAAAGCC+GGG | + | tig0043321:5461-5480 | Msa1463480:CDS | 55.0% | |
| AACCAGCCCGGCTTTCACTA+CGG | - | tig0043321:5470-5489 | Msa1463480:intergenic | 55.0% | |
| GCTGCTACAGCTGCGACAAT+TGG | + | tig0043321:5612-5631 | Msa1463480:intron | 55.0% | |
| CAGAAGTGAGTGCTCGAGCA+AGG | - | tig0043321:6580-6599 | Msa1463480:intergenic | 55.0% | |
| CACCTGCTGCACACGTAAGT+TGG | - | tig0043321:6609-6628 | Msa1463480:intergenic | 55.0% | |
| TGGTACCATCTCTGCCTCTG+CGG | - | tig0043321:7105-7124 | Msa1463480:intergenic | 55.0% | |
| TCCAGCTTCCTCTGTCTCTC+TGG | + | tig0043321:8069-8088 | Msa1463480:CDS | 55.0% | |
| TCCAGAGAGACAGAGGAAGC+TGG | - | tig0043321:8073-8092 | Msa1463480:intergenic | 55.0% | |
| TCTCCGACAGTAGCACAGTC+AGG | - | tig0043321:8752-8771 | Msa1463480:intergenic | 55.0% | |
| !! | GGAGGGGAAAGAGGCATCTT+TGG | - | tig0043321:9037-9056 | Msa1463480:intergenic | 55.0% |
| GATAACATGAGGCTGCGGAG+GGG | - | tig0043321:9053-9072 | Msa1463480:intergenic | 55.0% | |
| CTGATAACATGAGGCTGCGG+AGG | - | tig0043321:9055-9074 | Msa1463480:intergenic | 55.0% | |
| ACGGTGCATCCACTGCTTGT+AGG | + | tig0043321:9357-9376 | Msa1463480:intron | 55.0% | |
| CATCCACTGCTTGTAGGCAC+TGG | + | tig0043321:9363-9382 | Msa1463480:intron | 55.0% | |
| GAGGTAGCAAGTCATGTGGC+AGG | + | tig0043321:9385-9404 | Msa1463480:CDS | 55.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | tig0043321:3784-3803 | Msa1463480:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | tig0043321:3788-3807 | Msa1463480:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | tig0043321:3789-3808 | Msa1463480:intron | 60.0% | |
| GAGGAGTGACTGCAGGTAGG+GGG | - | tig0043321:3889-3908 | Msa1463480:intergenic | 60.0% | |
| !! | AGCCGGGCTGGTTCAGTTGT+TGG | + | tig0043321:5477-5496 | Msa1463480:CDS | 60.0% |
| GGCCAACTTACGTGTGCAGC+AGG | + | tig0043321:6604-6623 | Msa1463480:CDS | 60.0% | |
| AAGCTCCGCAGAGGCAGAGA+TGG | + | tig0043321:7097-7116 | Msa1463480:CDS | 60.0% | |
| GCTGGAAGAAGCGGATCACC+AGG | - | tig0043321:8055-8074 | Msa1463480:intergenic | 60.0% | |
| CGTTGCCCCCTGCGTATCAA+AGG | + | tig0043321:8236-8255 | Msa1463480:CDS | 60.0% | |
| CCTCCAGTGCCTACAAGCAG+TGG | - | tig0043321:9369-9388 | Msa1463480:intergenic | 60.0% | |
| !! | CCACTGCTTGTAGGCACTGG+AGG | + | tig0043321:9366-9385 | Msa1463480:intron | 60.0% |
| TGCGGGAGCTTCAGTGCACC+GGG | - | tig0043321:3783-3802 | Msa1463480:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | tig0043321:3800-3819 | Msa1463480:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | tig0043321:3801-3820 | Msa1463480:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | tig0043321:3800-3819 | Msa1463480:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | tig0043321:3801-3820 | Msa1463480:intron | 65.0% | |
| GTCCGTAGTGAAAGCCGGGC+TGG | + | tig0043321:5465-5484 | Msa1463480:CDS | 65.0% | |
| TGAGGCTGCGGAGGGGAAAG+AGG | - | tig0043321:9046-9065 | Msa1463480:intergenic | 65.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | tig0043321:3794-3813 | Msa1463480:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | tig0043321:3795-3814 | Msa1463480:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | tig0043321:3799-3818 | Msa1463480:intron | 70.0% | |
| GGGGGCAACGTTCCTGCCAG+AGG | - | tig0043321:8226-8245 | Msa1463480:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043321 | gene | 2825 | 9998 | 2825 | ID=Msa1463480;Name=Msa1463480 |
| tig0043321 | mRNA | 2825 | 9998 | 2825 | ID=Msa1463480-mRNA-1;Parent=Msa1463480;Name=Msa1463480-mRNA-1;_AED=0.12;_eAED=0.12;_QI=97|1|0.95|1|0.94|0.9|20|0|976 |
| tig0043321 | exon | 2825 | 2903 | 2825 | ID=Msa1463480-mRNA-1:exon:24061;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 3376 | 3528 | 3376 | ID=Msa1463480-mRNA-1:exon:24062;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 4098 | 4172 | 4098 | ID=Msa1463480-mRNA-1:exon:24063;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 4304 | 4419 | 4304 | ID=Msa1463480-mRNA-1:exon:24064;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 4582 | 4696 | 4582 | ID=Msa1463480-mRNA-1:exon:24065;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 4869 | 4997 | 4869 | ID=Msa1463480-mRNA-1:exon:24066;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 5128 | 5175 | 5128 | ID=Msa1463480-mRNA-1:exon:24067;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 5369 | 5571 | 5369 | ID=Msa1463480-mRNA-1:exon:24068;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 5695 | 5891 | 5695 | ID=Msa1463480-mRNA-1:exon:24069;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 6106 | 6389 | 6106 | ID=Msa1463480-mRNA-1:exon:24070;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 6479 | 6625 | 6479 | ID=Msa1463480-mRNA-1:exon:24071;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 6878 | 7282 | 6878 | ID=Msa1463480-mRNA-1:exon:24072;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 7376 | 7525 | 7376 | ID=Msa1463480-mRNA-1:exon:24073;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 8032 | 8116 | 8032 | ID=Msa1463480-mRNA-1:exon:24074;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 8233 | 8357 | 8233 | ID=Msa1463480-mRNA-1:exon:24075;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 8446 | 8637 | 8446 | ID=Msa1463480-mRNA-1:exon:24076;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 8735 | 8869 | 8735 | ID=Msa1463480-mRNA-1:exon:24077;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 8959 | 9096 | 8959 | ID=Msa1463480-mRNA-1:exon:24078;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 9379 | 9585 | 9379 | ID=Msa1463480-mRNA-1:exon:24079;Parent=Msa1463480-mRNA-1 |
| tig0043321 | exon | 9957 | 9998 | 9957 | ID=Msa1463480-mRNA-1:exon:24080;Parent=Msa1463480-mRNA-1 |
| tig0043321 | five_prime_UTR | 2825 | 2903 | 2825 | ID=Msa1463480-mRNA-1:five_prime_utr;Parent=Msa1463480-mRNA-1 |
| tig0043321 | five_prime_UTR | 3376 | 3393 | 3376 | ID=Msa1463480-mRNA-1:five_prime_utr;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 3394 | 3528 | 3394 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 4098 | 4172 | 4098 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 4304 | 4419 | 4304 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 4582 | 4696 | 4582 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 4869 | 4997 | 4869 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 5128 | 5175 | 5128 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 5369 | 5571 | 5369 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 5695 | 5891 | 5695 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 6106 | 6389 | 6106 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 6479 | 6625 | 6479 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 6878 | 7282 | 6878 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 7376 | 7525 | 7376 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 8032 | 8116 | 8032 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 8233 | 8357 | 8233 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 8446 | 8637 | 8446 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 8735 | 8869 | 8735 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 8959 | 9096 | 8959 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 9379 | 9585 | 9379 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| tig0043321 | CDS | 9957 | 9998 | 9957 | ID=Msa1463480-mRNA-1:cds;Parent=Msa1463480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
