AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0820620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0820620 MtrunA17_Chr5g0440631 99.009 908 9 0 1 908 1 908 0.0 1869
Msa0820620 MtrunA17_Chr5g0440641 86.013 908 111 5 1 908 1 892 0.0 1579
Msa0820620 MtrunA17_Chr3g0118281 81.179 882 158 5 28 908 118 992 0.0 1518
Msa0820620 MtrunA17_Chr6g0467081 79.528 889 174 3 20 908 19 899 0.0 1472
Msa0820620 MtrunA17_Chr3g0121101 60.294 884 332 8 35 907 34 909 0.0 1043
Msa0820620 MtrunA17_Chr3g0080331 59.330 627 225 4 219 839 22 624 0.0 772
Msa0820620 MtrunA17_Chr6g0481121 36.235 919 481 28 43 907 241 1108 3.06e-162 503
Msa0820620 MtrunA17_Chr2g0308031 34.928 899 503 23 42 907 65 914 5.43e-159 489
Msa0820620 MtrunA17_Chr4g0027691 35.379 896 502 25 43 907 121 970 7.57e-159 491
Msa0820620 MtrunA17_Chr1g0204551 34.768 906 505 23 43 907 117 977 6.13e-158 488
Msa0820620 MtrunA17_Chr1g0166341 34.551 903 507 25 43 907 122 978 3.91e-154 478
Msa0820620 MtrunA17_Chr4g0027701 34.894 940 516 25 10 907 122 1007 3.06e-152 474
Msa0820620 MtrunA17_Chr4g0062941 34.365 905 500 26 42 907 26 875 2.14e-148 460
Msa0820620 MtrunA17_Chr5g0418071 29.902 923 550 29 31 907 144 1015 2.75e-116 379
Msa0820620 MtrunA17_Chr4g0043461 32.000 725 431 21 170 860 223 919 3.98e-94 318
Msa0820620 MtrunA17_Chr2g0291701 30.055 722 443 20 173 860 282 975 5.96e-92 313
Msa0820620 MtrunA17_Chr3g0080321 58.011 181 66 2 39 219 19 189 5.69e-60 202
Msa0820620 MtrunA17_Chr7g0268301 71.875 96 13 1 482 577 2 83 1.04e-36 134
Msa0820620 MtrunA17_Chr7g0268311 60.000 95 23 3 311 402 22 104 8.08e-27 105
Msa0820620 MtrunA17_Chr5g0448711 60.274 73 25 1 836 908 38 106 1.06e-19 86.7
Msa0820620 MtrunA17_Chr1g0164751 33.140 172 96 5 603 772 124 278 4.12e-14 73.9
Msa0820620 MtrunA17_Chr6g0464401 51.562 64 31 0 596 659 9 72 4.31e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0820620 AT2G27040.1 71.509 888 243 5 25 907 41 923 0.0 1358
Msa0820620 AT2G27040.2 71.509 888 243 5 25 907 41 923 0.0 1358
Msa0820620 AT5G21150.1 68.045 895 267 11 16 907 17 895 0.0 1254
Msa0820620 AT5G21030.2 60.177 904 299 16 10 907 5 853 0.0 1047
Msa0820620 AT5G21030.1 60.177 904 295 17 10 907 5 849 0.0 1041
Msa0820620 AT2G32940.1 56.307 872 353 8 42 907 28 877 0.0 966
Msa0820620 AT2G27880.1 36.031 902 485 25 43 907 150 996 1.68e-159 493
Msa0820620 AT5G43810.4 34.692 908 499 24 43 907 131 987 1.14e-156 486
Msa0820620 AT5G43810.1 34.692 908 499 24 43 907 131 987 1.14e-156 486
Msa0820620 AT5G43810.2 34.692 908 499 24 43 907 131 987 1.14e-156 486
Msa0820620 AT5G43810.3 34.692 908 499 24 43 907 131 987 1.14e-156 486
Msa0820620 AT1G48410.1 33.717 955 523 28 12 907 144 1047 1.57e-152 476
Msa0820620 AT1G48410.3 33.682 956 524 28 12 907 144 1049 1.73e-152 476
Msa0820620 AT1G48410.2 33.682 956 524 28 12 907 144 1049 1.73e-152 476
Msa0820620 AT1G69440.1 30.907 893 524 31 47 907 158 989 1.77e-113 372
Msa0820620 AT1G31280.1 29.332 883 524 28 15 860 138 957 1.84e-95 323
Msa0820620 AT1G31290.3 30.159 882 504 31 27 862 250 1065 8.33e-95 323
Msa0820620 AT1G31290.2 30.159 882 504 31 27 862 288 1103 1.11e-94 323
Msa0820620 AT1G31290.1 30.159 882 504 31 27 862 324 1139 1.89e-94 323

Find 250 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGCTCCTACTCTCATTT+TGG 0.125101 5_3:+58106810 Msa0820620:CDS
GAAGTTCCATCTCCCATTTC+TGG 0.140891 5_3:-58105966 None:intergenic
GGCAACAATCACCATAAATT+TGG 0.147348 5_3:-58107838 None:intergenic
GCAGACATTGTCCATCAATT+TGG 0.191316 5_3:-58108762 None:intergenic
GCCATCGCTAATGCCTTAAA+AGG 0.218227 5_3:+58103537 Msa0820620:CDS
TTTGACTTACAGTTGAAGTT+TGG 0.257080 5_3:+58105923 Msa0820620:intron
ACTTATGGTTCTGAGCTTAA+TGG 0.263665 5_3:+58103195 Msa0820620:CDS
AACTCATTATCATGTCCTTT+TGG 0.270857 5_3:+58108323 Msa0820620:CDS
CCAGCACCCTTTCCTTCAAC+AGG 0.279192 5_3:-58103144 None:intergenic
TCATCCTCCTTATCTGATAC+TGG 0.280966 5_3:-58107100 None:intergenic
GATCATTGTGGAAGAAATTC+TGG 0.281342 5_3:-58103737 None:intergenic
AGCATCTAAGTTACCTCAAC+TGG 0.285402 5_3:-58104530 None:intergenic
AGAATTATCAAGAAGCGATT+AGG 0.292990 5_3:+58103571 Msa0820620:CDS
CCTACATCCGTGAAATTCTT+AGG 0.297424 5_3:-58103759 None:intergenic
AGGAAGAACTCTGATCTTTA+TGG 0.298034 5_3:+58106425 Msa0820620:CDS
CAGACATTGTCCATCAATTT+GGG 0.298038 5_3:-58108761 None:intergenic
TTTCAGTCTTGACTGGAATA+AGG 0.302768 5_3:+58104011 Msa0820620:CDS
TGCAAAGTAAATAACAAGTT+TGG 0.304203 5_3:-58108822 None:intergenic
GCAACAATCACCATAAATTT+GGG 0.306455 5_3:-58107837 None:intergenic
AACCAAGAGTACAAAATTAC+TGG 0.311607 5_3:+58104201 Msa0820620:CDS
ATTTGACAACCTCAATGATT+TGG 0.317059 5_3:-58107718 None:intergenic
GGCCCTTGATATCTAAATAT+AGG 0.320167 5_3:+58107023 Msa0820620:CDS
AAAGTGGAACCCCAAATTTA+TGG 0.327746 5_3:+58107827 Msa0820620:CDS
GACAGAGTTCAAGAAACTTA+TGG 0.329511 5_3:+58103180 Msa0820620:CDS
TGAAAGGATCTCTCACATTC+TGG 0.330147 5_3:-58103993 None:intergenic
CATGTTCTTTGTTTGAGTTA+TGG 0.334860 5_3:+58108790 Msa0820620:exon
GAGGGCTGCATTCCAGCTTC+AGG 0.336895 5_3:+58103802 Msa0820620:CDS
CTCTTCCTGTCAGTATCATT+TGG 0.339440 5_3:-58103444 None:intergenic
GCCCTTGATATCTAAATATA+GGG 0.341173 5_3:+58107024 Msa0820620:CDS
TCCAATCTGCTATGCCCATT+TGG 0.342609 5_3:+58108631 Msa0820620:CDS
CTTATGGTTCTGAGCTTAAT+GGG 0.348524 5_3:+58103196 Msa0820620:CDS
GAGGTGGTGCACGCCTAAAC+TGG 0.353469 5_3:-58106319 None:intergenic
CCCACAGTTGCCCAAATTGA+TGG 0.357282 5_3:+58108751 Msa0820620:CDS
GGGACAAATGTTGGTCGCTT+TGG 0.358126 5_3:-58104509 None:intergenic
GCTGGGACAATGGGAGGTGG+CGG 0.363377 5_3:-58102823 None:intergenic
TTGACTTACAGTTGAAGTTT+GGG 0.363727 5_3:+58105924 Msa0820620:intron
TCCAATGGCAAGACGTGGAC+TGG 0.366638 5_3:+58102906 Msa0820620:CDS
AACCTGTTAAAATAGAGAAA+TGG 0.366755 5_3:+58106098 Msa0820620:CDS
CTCAGTGTATTGCTCCTACC+AGG 0.367615 5_3:+58106578 Msa0820620:CDS
AAAGCTGATTTCAACTTTGT+AGG 0.368467 5_3:-58103493 None:intergenic
ACTTTGTGTGATGATTCTTC+TGG 0.369516 5_3:-58107860 None:intergenic
TTCTCTCTCAAACTTCTTCA+AGG 0.372279 5_3:+58101648 Msa0820620:five_prime_UTR
CTGGGACAATGGGAGGTGGC+GGG 0.381536 5_3:-58102822 None:intergenic
TGGGACAATGGGAGGTGGCG+GGG 0.382310 5_3:-58102821 None:intergenic
TTGAAGTGTGGACAGGGCTT+TGG 0.383459 5_3:-58105125 None:intergenic
CTGAAAATTATGATATTGTC+TGG 0.384283 5_3:-58107470 None:intergenic
GGGACAATGGGAGGTGGCGG+GGG 0.384708 5_3:-58102820 None:intergenic
GCAAATTTCTTGATGAAAAG+TGG 0.388890 5_3:+58107811 Msa0820620:CDS
GAGAAGACTCTGTTTACTAT+TGG 0.391306 5_3:+58103240 Msa0820620:CDS
TGCCCTATATTTAGATATCA+AGG 0.395995 5_3:-58107026 None:intergenic
AAGAAGAGAGGTGCTGTTCC+CGG 0.396470 5_3:+58104383 Msa0820620:CDS
GAATTATCAAGAAGCGATTA+GGG 0.397722 5_3:+58103572 Msa0820620:CDS
TTGAAGAAAACGGCCAGTTT+AGG 0.399457 5_3:+58106306 Msa0820620:CDS
GAAGACTTCAATCCCAGAAA+TGG 0.400873 5_3:+58105953 Msa0820620:CDS
AAGTTCCATCTCCCATTTCT+GGG 0.401631 5_3:-58105965 None:intergenic
TTGATTGGTTCAAGATCTGC+TGG 0.409933 5_3:-58102841 None:intergenic
ACCTGTTAAAATAGAGAAAT+GGG 0.413540 5_3:+58106099 Msa0820620:CDS
AGAAGCCACAAGAGCGGATG+AGG 0.415926 5_3:+58105176 Msa0820620:CDS
ACTTTGTGTGGTCCTGAAGC+TGG 0.418099 5_3:-58103814 None:intergenic
AGGAGGATGAAGGAATAATA+AGG 0.420217 5_3:+58107113 Msa0820620:CDS
CATGTAGAAATCATAATTCC+GGG 0.422697 5_3:-58108043 None:intergenic
GATGTAGGAGGTGGTGTTCT+TGG 0.424732 5_3:+58103774 Msa0820620:CDS
TTTGGACTTCCATGTCCATC+AGG 0.425248 5_3:-58103426 None:intergenic
TTTGATTGCTTTGAAGAAAA+CGG 0.426012 5_3:+58106296 Msa0820620:CDS
AGTGGGCTGTCTTTGAATAT+AGG 0.426346 5_3:+58103834 Msa0820620:CDS
AAAGGACTCTAAAGAATTTG+AGG 0.426856 5_3:+58104160 Msa0820620:CDS
ATAAGCTCTGTTCAGGAAAT+GGG 0.427513 5_3:+58102772 Msa0820620:intron
GGGAAAGACCTTGCGTATGA+TGG 0.430816 5_3:+58103216 Msa0820620:CDS
ACATGTAGAAATCATAATTC+CGG 0.431069 5_3:-58108044 None:intergenic
TCACCAGGAGGCACATTATC+CGG 0.432944 5_3:-58107900 None:intergenic
TGTGGAATTTCAATAACATC+TGG 0.434716 5_3:+58105335 Msa0820620:CDS
TTGAAGATGTCACTTCAAAC+AGG 0.437609 5_3:+58103301 Msa0820620:CDS
CAACCTTAGCACCCTGAGTT+CGG 0.437681 5_3:-58107054 None:intergenic
CTCCTCTGTATCATCTTCTC+CGG 0.438923 5_3:-58104402 None:intergenic
CTTTGTGTGATGATTCTTCT+GGG 0.439440 5_3:-58107859 None:intergenic
TGGATGAATGTTAATATTTG+TGG 0.442336 5_3:+58108988 Msa0820620:three_prime_UTR
GCAAAACATTGGTCAGATAC+TGG 0.446295 5_3:-58106609 None:intergenic
ATGACCTTTGCTGCAAGGTC+GGG 0.446337 5_3:+58108895 Msa0820620:three_prime_UTR
AGGCATTAGCGATGGCCTGC+AGG 0.446982 5_3:-58103530 None:intergenic
GTTCTTCCAGCCTGGATCTC+CGG 0.448860 5_3:+58107881 Msa0820620:CDS
GTTTAGGCGTGCACCACCTC+TGG 0.450520 5_3:+58106322 Msa0820620:CDS
GATGAACCTTTGCTGATGTC+TGG 0.453254 5_3:+58108869 Msa0820620:three_prime_UTR
ACAAGCTCTTGAAGATCATC+TGG 0.455050 5_3:-58108363 None:intergenic
CCACTTGAGAAGCAGCCAAA+TGG 0.455401 5_3:-58108646 None:intergenic
TCAGTTCAATGTTCAAAACT+TGG 0.460356 5_3:-58107694 None:intergenic
CACTTGAGAAGCAGCCAAAT+GGG 0.461002 5_3:-58108645 None:intergenic
TGCCTCAAAGATTCCCCTGC+AGG 0.463684 5_3:+58103515 Msa0820620:CDS
ATACGATACTTACACTGTAC+TGG 0.463901 5_3:-58103005 None:intergenic
TCAAGATCTGCTGGGACAAT+GGG 0.464708 5_3:-58102832 None:intergenic
TTCAAGATCTGCTGGGACAA+TGG 0.465092 5_3:-58102833 None:intergenic
GAAGATGGACGCCCTGTTGA+AGG 0.466191 5_3:+58103132 Msa0820620:CDS
GGGCTTTGGTATAGCGTTGA+AGG 0.467408 5_3:-58105111 None:intergenic
TAGGGCATGCGTCCGAACTC+AGG 0.467508 5_3:+58107042 Msa0820620:CDS
GAGATCCTTTCAGTCTTGAC+TGG 0.474223 5_3:+58104004 Msa0820620:CDS
CCATTTGGCTGCTTCTCAAG+TGG 0.476182 5_3:+58108646 Msa0820620:CDS
AAGTCCTCGCACATCACAAC+GGG 0.476378 5_3:-58106140 None:intergenic
GGCATTAGCGATGGCCTGCA+GGG 0.477897 5_3:-58103529 None:intergenic
TTCTACATGTGTGCTCATGC+TGG 0.479915 5_3:+58108057 Msa0820620:CDS
GTGGTTTGCTGAAAGATCCT+TGG 0.481132 5_3:+58109007 Msa0820620:three_prime_UTR
GGCACATTATCCGGAGATCC+AGG 0.482891 5_3:-58107891 None:intergenic
TTGGGCATGGATGTTTCTCA+TGG 0.483692 5_3:+58106829 Msa0820620:CDS
GATGACCTTTGCTGCAAGGT+CGG 0.484760 5_3:+58108894 Msa0820620:three_prime_UTR
AGCAGACAAAGGAGAAACTT+AGG 0.485208 5_3:-58106395 None:intergenic
CACGTTCAGTCTAAACTACC+AGG 0.486546 5_3:+58106368 Msa0820620:CDS
GGAAAGACCTTGCGTATGAT+GGG 0.488113 5_3:+58103217 Msa0820620:CDS
ACAACCATGATTGTTCATCC+TGG 0.488945 5_3:+58103943 Msa0820620:CDS
CCCAGTCCACGTCTTGCCAT+TGG 0.492747 5_3:-58102907 None:intergenic
AGATCAGAGTTCTTCCTCTC+AGG 0.495404 5_3:-58106419 None:intergenic
CACACAAAGTTCTTCCAGCC+TGG 0.495690 5_3:+58107873 Msa0820620:CDS
ATCTGCCATGTATTAATGTT+GGG 0.495725 5_3:+58104483 Msa0820620:CDS
GGCCTGCAGGGGAATCTTTG+AGG 0.495878 5_3:-58103517 None:intergenic
AAGAAATCAACCACAGGCCC+AGG 0.495949 5_3:-58103961 None:intergenic
AAGACTTCAATCCCAGAAAT+GGG 0.497285 5_3:+58105954 Msa0820620:CDS
CATTTGGCTGCTTCTCAAGT+GGG 0.502960 5_3:+58108647 Msa0820620:CDS
ACGTCTTGCCATTGGAACCT+TGG 0.505019 5_3:-58102899 None:intergenic
GCCAAATGGGCATAGCAGAT+TGG 0.505414 5_3:-58108632 None:intergenic
ATGATAATGAGTTGGCCTAC+TGG 0.506108 5_3:-58108313 None:intergenic
CCAATGGCAAGACGTGGACT+GGG 0.506992 5_3:+58102907 Msa0820620:CDS
AAGATCTTTGAAGTGTGGAC+AGG 0.507876 5_3:-58105132 None:intergenic
ATTTGAAATGTGAAGGTCCA+TGG 0.512015 5_3:+58106521 Msa0820620:intron
AATTCCACAGTTACGTAGCA+TGG 0.513797 5_3:-58105321 None:intergenic
CAATGATCCTAAGAATTTCA+CGG 0.514283 5_3:+58103752 Msa0820620:CDS
CCTGTTGAAGGAAAGGGTGC+TGG 0.514545 5_3:+58103144 Msa0820620:CDS
GTGTGCGGCTCAATCTTGAT+TGG 0.516796 5_3:-58102856 None:intergenic
CTTGCCATTGGAACCTTGGT+GGG 0.516809 5_3:-58102895 None:intergenic
CAACAAGTATTCTCAAACCA+AGG 0.518831 5_3:-58109024 None:intergenic
CAACTTTGTAGGTCTTTGAT+CGG 0.519218 5_3:-58103482 None:intergenic
GAGGGAATTTCAGTTTGTCC+AGG 0.520133 5_3:-58106856 None:intergenic
AAAAGCCAATCTCATCCAAA+AGG 0.525339 5_3:-58108338 None:intergenic
CATTATCCGGAGATCCAGGC+TGG 0.525864 5_3:-58107887 None:intergenic
TCCATCAATTTGGGCAACTG+TGG 0.526082 5_3:-58108752 None:intergenic
AATTTGGGCAACTGTGGGAT+GGG 0.530026 5_3:-58108746 None:intergenic
TCTTGCCATTGGAACCTTGG+TGG 0.530951 5_3:-58102896 None:intergenic
TTTGAAACAATAGGGATGGA+TGG 0.531152 5_3:-58106790 None:intergenic
AAGACCCTCATCCGCTCTTG+TGG 0.532758 5_3:-58105181 None:intergenic
CCTAAGAATTTCACGGATGT+AGG 0.535096 5_3:+58103759 Msa0820620:CDS
GGGCAACTGTGGGATGGGAG+AGG 0.535595 5_3:-58108741 None:intergenic
CAATTTGGGCAACTGTGGGA+TGG 0.535890 5_3:-58108747 None:intergenic
CAACCATGATTGTTCATCCT+GGG 0.535985 5_3:+58103944 Msa0820620:CDS
ATAAAATGTGGAGGAATGAA+AGG 0.536134 5_3:+58106175 Msa0820620:CDS
AACGGGAATGCTAGCCCTGA+TGG 0.537473 5_3:+58103411 Msa0820620:CDS
CAAATGATACTGACAGGAAG+AGG 0.538365 5_3:+58103445 Msa0820620:CDS
TCCTCTGTATCATCTTCTCC+GGG 0.538643 5_3:-58104401 None:intergenic
GAACCTTTGCTGATGTCTGG+TGG 0.539236 5_3:+58108872 Msa0820620:three_prime_UTR
GATCTGCCATGTATTAATGT+TGG 0.539536 5_3:+58104482 Msa0820620:CDS
GGCTTCCCAACATTAATACA+TGG 0.539567 5_3:-58104488 None:intergenic
AAAACCCGACCTTGCAGCAA+AGG 0.539948 5_3:-58108899 None:intergenic
CGTCCGAACTCAGGGTGCTA+AGG 0.540192 5_3:+58107051 Msa0820620:CDS
GGACGCCCTGTTGAAGGAAA+GGG 0.541901 5_3:+58103138 Msa0820620:CDS
GTGATGTGCGAGGACTTGTA+AGG 0.542125 5_3:+58106146 Msa0820620:CDS
GGTGGTGTTCTTGGATGCAG+AGG 0.543916 5_3:+58103783 Msa0820620:CDS
AGACGTGGACTGGGCTCGAA+GGG 0.544606 5_3:+58102916 Msa0820620:CDS
GATGTTTCTCATGGTTCACC+TGG 0.546335 5_3:+58106838 Msa0820620:CDS
GAAGTCCAAATGATACTGAC+AGG 0.546381 5_3:+58103439 Msa0820620:CDS
CTTCCCTTGTGGAAAAGTCT+AGG 0.546591 5_3:+58105152 Msa0820620:CDS
ATTGATCTTCAGCAAAACAT+TGG 0.550562 5_3:-58106620 None:intergenic
GGTGGATGACCTTTGCTGCA+AGG 0.552587 5_3:+58108890 Msa0820620:three_prime_UTR
ACCTCAACTGGGACAAATGT+TGG 0.553100 5_3:-58104518 None:intergenic
TCTGGCTTCACACAAGTTGA+CGG 0.553294 5_3:+58105353 Msa0820620:CDS
AGGAGAAACTTAGGAGCCCC+TGG 0.553396 5_3:-58106386 None:intergenic
AAGACGTGGACTGGGCTCGA+AGG 0.553897 5_3:+58102915 Msa0820620:CDS
TTGAAGGAAAGGGTGCTGGC+AGG 0.554011 5_3:+58103148 Msa0820620:CDS
TGGACGCCCTGTTGAAGGAA+AGG 0.554101 5_3:+58103137 Msa0820620:CDS
TCATCTAGCCATGGTGGCAG+CGG 0.556067 5_3:+58108704 Msa0820620:CDS
TATTGTTACCGCAGCAATCG+AGG 0.556782 5_3:-58106875 None:intergenic
ACCAACATTTGTCCCAGTTG+AGG 0.559402 5_3:+58104517 Msa0820620:CDS
TGAACTGAGCCAAATCATTG+AGG 0.559983 5_3:+58107709 Msa0820620:CDS
CCATCGCTAATGCCTTAAAA+GGG 0.560542 5_3:+58103538 Msa0820620:CDS
AGTACTACTGCTATCTCTGT+TGG 0.560841 5_3:+58108524 Msa0820620:CDS
AAAAGGACATGATAATGAGT+TGG 0.562000 5_3:-58108321 None:intergenic
AGATCTTTGAAGTGTGGACA+GGG 0.563749 5_3:-58105131 None:intergenic
TATCACGACCGCTGCCACCA+TGG 0.564045 5_3:-58108712 None:intergenic
TCCTTTGTCTGCTTCCTGAG+AGG 0.565365 5_3:+58106405 Msa0820620:CDS
AGGGCATGCGTCCGAACTCA+GGG 0.566072 5_3:+58107043 Msa0820620:CDS
AATTACAGCTGGTCTTTGCA+AGG 0.567257 5_3:-58104237 None:intergenic
AATGCTAGCCCTGATGGACA+TGG 0.567961 5_3:+58103417 Msa0820620:CDS
GCTTCCCACCAAGGTTCCAA+TGG 0.568344 5_3:+58102891 Msa0820620:CDS
CAGATACTGGTCGTTCACCC+TGG 0.568760 5_3:-58106596 None:intergenic
TTACAGTTGAAGTTTGGGAA+TGG 0.569594 5_3:+58105929 Msa0820620:intron
AGAGCGGATGAGGGTCTTGA+CGG 0.569768 5_3:+58105186 Msa0820620:CDS
AGCTTCAGGACCACACAAAG+TGG 0.572451 5_3:+58103816 Msa0820620:CDS
TTCTTGGCCACAGGTATCAG+AGG 0.572451 5_3:+58108501 Msa0820620:intron
TCTGCTGGGACAATGGGAGG+TGG 0.576180 5_3:-58102826 None:intergenic
GGCTTTGGTATAGCGTTGAA+GGG 0.578616 5_3:-58105110 None:intergenic
GTTCAAGCCAGTATCAGATA+AGG 0.579234 5_3:+58107093 Msa0820620:CDS
CAAAGACAGCCCACTTTGTG+TGG 0.579631 5_3:-58103826 None:intergenic
CTGGCTTCACACAAGTTGAC+GGG 0.580131 5_3:+58105354 Msa0820620:CDS
AAGAATTTCACGGATGTAGG+AGG 0.581022 5_3:+58103762 Msa0820620:CDS
GTGGTGTTCTTGGATGCAGA+GGG 0.581678 5_3:+58103784 Msa0820620:CDS
TCAATCCCAGAAATGGGAGA+TGG 0.583790 5_3:+58105960 Msa0820620:CDS
TTATTCCAGTCAAGACTGAA+AGG 0.584520 5_3:-58104009 None:intergenic
CATAACTCAAACAAAGAACA+TGG 0.585795 5_3:-58108789 None:intergenic
AGGCCCAGGATGAACAATCA+TGG 0.587236 5_3:-58103947 None:intergenic
GTATCAGATAAGGAGGATGA+AGG 0.587451 5_3:+58107103 Msa0820620:CDS
CTTCACACAAGTTGACGGGA+GGG 0.588682 5_3:+58105358 Msa0820620:CDS
GATTGTTCATCCTGGGCCTG+TGG 0.588790 5_3:+58103951 Msa0820620:CDS
AGGTTGTAAGCTCAAGGCAA+TGG 0.590895 5_3:+58107002 Msa0820620:intron
TCCTCTCAGGAAGCAGACAA+AGG 0.594522 5_3:-58106406 None:intergenic
ATTCCACAGTTACGTAGCAT+GGG 0.595866 5_3:-58105320 None:intergenic
CAGCACCCTTTCCTTCAACA+GGG 0.596872 5_3:-58103143 None:intergenic
CGTGACACGTGCATGTCTGA+AGG 0.596984 5_3:-58108945 None:intergenic
TGAAATTCTTAGGATCATTG+TGG 0.598281 5_3:-58103749 None:intergenic
TTGGACTTCCATGTCCATCA+GGG 0.598571 5_3:-58103425 None:intergenic
TCTCCGGATAATGTGCCTCC+TGG 0.601087 5_3:+58107897 Msa0820620:CDS
GTAAGGGATCTGATAAAATG+TGG 0.602054 5_3:+58106163 Msa0820620:CDS
TTGAAGTGATTTGTAAGCAG+AGG 0.603076 5_3:-58102949 None:intergenic
AATTTCACGGATGTAGGAGG+TGG 0.603434 5_3:+58103765 Msa0820620:CDS
AGATCTGCTGGGACAATGGG+AGG 0.605354 5_3:-58102829 None:intergenic
GTGAATGTTACTAACACTGA+TGG 0.607814 5_3:+58102973 Msa0820620:CDS
GCCCTATATTTAGATATCAA+GGG 0.609362 5_3:-58107025 None:intergenic
ATTGTTACCGCAGCAATCGA+GGG 0.609364 5_3:-58106874 None:intergenic
ACAACAAAATCTGTCATCCC+CGG 0.609557 5_3:+58108025 Msa0820620:CDS
CCATCAATTTGGGCAACTGT+GGG 0.610368 5_3:-58108751 None:intergenic
CAAGCCAGTATCAGATAAGG+AGG 0.610634 5_3:+58107096 Msa0820620:CDS
TCCATGCCCAAAATGAGAGT+AGG 0.612941 5_3:-58106817 None:intergenic
AGAGTGTGATATCATCGCAC+TGG 0.613213 5_3:-58101512 None:intergenic
ACTTCAAAGATCTTCCCTTG+TGG 0.614391 5_3:+58105141 Msa0820620:CDS
TGATTGGTTCAAGATCTGCT+GGG 0.616640 5_3:-58102840 None:intergenic
TTTGCTGAAGATCAATGCAA+AGG 0.619675 5_3:+58106627 Msa0820620:CDS
TCAGTGTATTGCTCCTACCA+GGG 0.624276 5_3:+58106579 Msa0820620:CDS
TCTTCTCCCCATCATACGCA+AGG 0.627331 5_3:-58103224 None:intergenic
GCAATCAAGAAATCAACCAC+AGG 0.627952 5_3:-58103967 None:intergenic
TCTGAAACTTCATCTAGCCA+TGG 0.629684 5_3:+58108695 Msa0820620:CDS
GCTTCACACAAGTTGACGGG+AGG 0.630138 5_3:+58105357 Msa0820620:CDS
AAGGGAAGATCTTTGAAGTG+TGG 0.633197 5_3:-58105137 None:intergenic
GAGCCCATGCTACGTAACTG+TGG 0.634775 5_3:+58105317 Msa0820620:CDS
TAAAATAGAGAAATGGGCTG+TGG 0.646383 5_3:+58106105 Msa0820620:CDS
TCTGCCCGTTGTGATGTGCG+AGG 0.647167 5_3:+58106136 Msa0820620:CDS
CAACAATCACCATAAATTTG+GGG 0.647316 5_3:-58107836 None:intergenic
TGAAATTCCCTCGATTGCTG+CGG 0.647497 5_3:+58106867 Msa0820620:CDS
GCATCTAAGTTACCTCAACT+GGG 0.647864 5_3:-58104529 None:intergenic
CTAGGCAGAAGCCACAAGAG+CGG 0.652116 5_3:+58105170 Msa0820620:CDS
GCATTAGCGATGGCCTGCAG+GGG 0.658024 5_3:-58103528 None:intergenic
GCTTCAGGACCACACAAAGT+GGG 0.658254 5_3:+58103817 Msa0820620:CDS
AGGGATCTGATAAAATGTGG+AGG 0.659465 5_3:+58106166 Msa0820620:CDS
ACGTTCAGTCTAAACTACCA+GGG 0.661828 5_3:+58106369 Msa0820620:CDS
CATCCACCAGACATCAGCAA+AGG 0.661951 5_3:-58108875 None:intergenic
AAGGTTCCAATGGCAAGACG+TGG 0.662015 5_3:+58102901 Msa0820620:CDS
TCTGTTCTCAGGGTACCAGT+AGG 0.664166 5_3:+58108298 Msa0820620:intron
GAAGCCACAAGAGCGGATGA+GGG 0.664428 5_3:+58105177 Msa0820620:CDS
GAAAGACCTTGCGTATGATG+GGG 0.671091 5_3:+58103218 Msa0820620:CDS
CAAGTCCTCGCACATCACAA+CGG 0.675833 5_3:-58106141 None:intergenic
AGGTTCACTCTGAAGAAGAG+AGG 0.677143 5_3:+58104371 Msa0820620:intron
CGTTCAGTCTAAACTACCAG+GGG 0.678350 5_3:+58106370 Msa0820620:CDS
TACTGGTCGTTCACCCTGGT+AGG 0.679221 5_3:-58106592 None:intergenic
GAAACTTCATCTAGCCATGG+TGG 0.683294 5_3:+58108698 Msa0820620:CDS
TGATGTGCGAGGACTTGTAA+GGG 0.687534 5_3:+58106147 Msa0820620:CDS
ATGTAGAAATCATAATTCCG+GGG 0.690302 5_3:-58108042 None:intergenic
TCCCGGAGAAGATGATACAG+AGG 0.691539 5_3:+58104400 Msa0820620:CDS
GAGATGGAACTTCAATAACA+AGG 0.719372 5_3:+58105976 Msa0820620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAAAAACTAAAAA+TGG - chr5_3:58101801-58101820 None:intergenic 10.0%
!! AATACATTTATAATAATGAA+AGG - chr5_3:58103642-58103661 None:intergenic 10.0%
!! CAACTTTATATATAAAATAA+TGG - chr5_3:58107953-58107972 None:intergenic 10.0%
!!! CATTATTTTATATATAAAGT+TGG + chr5_3:58107951-58107970 Msa0820620:intron 10.0%
!! TAAAAATGGAAGAAAAAAAT+TGG - chr5_3:58101787-58101806 None:intergenic 15.0%
!!! TTAGTTTTAGTTTTAGTTTT+AGG + chr5_3:58102243-58102262 Msa0820620:intron 15.0%
!!! TAGTTTTAGTTTTAGTTTTA+GGG + chr5_3:58102244-58102263 Msa0820620:intron 15.0%
!! CAAAAAAAAAATCAAAATCA+GGG - chr5_3:58102490-58102509 None:intergenic 15.0%
!! ACAAAAAAAAAATCAAAATC+AGG - chr5_3:58102491-58102510 None:intergenic 15.0%
!! TACACAAATAAAATATACAA+AGG - chr5_3:58104135-58104154 None:intergenic 15.0%
!!! TTTGTATATTTTATTTGTGT+AGG + chr5_3:58104134-58104153 Msa0820620:intron 15.0%
!!! AGTAAGTATTTTTCTTAAAT+AGG - chr5_3:58104746-58104765 None:intergenic 15.0%
!! ACATAAATTTCATCAAATAA+TGG - chr5_3:58105621-58105640 None:intergenic 15.0%
!!! AAATTTTATTTGAAATGTGA+AGG + chr5_3:58106514-58106533 Msa0820620:intron 15.0%
!! ATATGGAAAATAATATTTCA+AGG - chr5_3:58107161-58107180 None:intergenic 15.0%
!!! TATTATTTTCCATATCTATT+TGG + chr5_3:58107166-58107185 Msa0820620:intron 15.0%
!!! ATTGATTTTTATAATAGTTC+TGG + chr5_3:58107437-58107456 Msa0820620:CDS 15.0%
!!! TTGATTTTTATAATAGTTCT+GGG + chr5_3:58107438-58107457 Msa0820620:CDS 15.0%
!!! ATCTTATTCTTTTAAATTCT+AGG + chr5_3:58107785-58107804 Msa0820620:intron 15.0%
!!! TTTTTTTTTATCAGCTATTT+TGG + chr5_3:58108968-58108987 Msa0820620:three_prime_UTR 15.0%
!!! AGCTTAATTTGTTTGAATTT+TGG + chr5_3:58102021-58102040 Msa0820620:intron 20.0%
!! AACCAAATTCAAACAAATTA+GGG - chr5_3:58102082-58102101 None:intergenic 20.0%
!! TAACCAAATTCAAACAAATT+AGG - chr5_3:58102083-58102102 None:intergenic 20.0%
!!! TCTAAATCTGGAAAATATTT+TGG + chr5_3:58102149-58102168 Msa0820620:intron 20.0%
!!! TTTTGTTGTTTTGTTTTTGT+TGG + chr5_3:58102267-58102286 Msa0820620:intron 20.0%
!!! CAAACATTTCTGAAAAATTA+GGG - chr5_3:58102392-58102411 None:intergenic 20.0%
!!! ACAAACATTTCTGAAAAATT+AGG - chr5_3:58102393-58102412 None:intergenic 20.0%
!! AAGTAGATTTAGTAAACTTT+AGG + chr5_3:58102650-58102669 Msa0820620:intron 20.0%
!! AGTAGATTTAGTAAACTTTA+GGG + chr5_3:58102651-58102670 Msa0820620:intron 20.0%
!! ACATAAAAGAAGATAATGAA+TGG - chr5_3:58102718-58102737 None:intergenic 20.0%
!! TCATTACTTTGTATTTGTTT+AGG + chr5_3:58103095-58103114 Msa0820620:intron 20.0%
!! AATAAAATATACAAAGGATC+AGG - chr5_3:58104129-58104148 None:intergenic 20.0%
!!! ATAAGCTAATACACAATTTT+AGG - chr5_3:58104576-58104595 None:intergenic 20.0%
!! TCAGCTATTATGTATAATTT+AGG + chr5_3:58104620-58104639 Msa0820620:intron 20.0%
!! CATATTTGAAAAGAATTGAA+GGG + chr5_3:58104700-58104719 Msa0820620:intron 20.0%
!! AAGTAGGTTAATTAATTCAT+TGG - chr5_3:58104984-58105003 None:intergenic 20.0%
!!! CTGCTTTTATTATTGTTTTT+TGG + chr5_3:58105403-58105422 Msa0820620:intron 20.0%
!!! GATCTACATTTTTAATTTTC+TGG + chr5_3:58106015-58106034 Msa0820620:intron 20.0%
!! GATAATATAAAAGAAACCAA+AGG - chr5_3:58106666-58106685 None:intergenic 20.0%
!!! GCTATTAATGTTGTATTTTA+TGG + chr5_3:58106913-58106932 Msa0820620:intron 20.0%
!!! AATGTTGTATTTTATGGTTT+CGG + chr5_3:58106919-58106938 Msa0820620:intron 20.0%
!! GAAAATAATATTTCAAGGAA+AGG - chr5_3:58107156-58107175 None:intergenic 20.0%
!!! ATGGATCTTTTTTCTTAAAA+AGG - chr5_3:58107252-58107271 None:intergenic 20.0%
!! GTAATACAACAATCTAAAAA+TGG - chr5_3:58107271-58107290 None:intergenic 20.0%
!! ATTACATATGTATAATCTTG+CGG + chr5_3:58107286-58107305 Msa0820620:intron 20.0%
!!! TTGATGGCTTAATTTATTTT+TGG + chr5_3:58107383-58107402 Msa0820620:intron 20.0%
!! TAAATATATGATTGCTTACT+TGG + chr5_3:58107754-58107773 Msa0820620:intron 20.0%
!! ATGAAAAAAAATCAGTATAC+AGG - chr5_3:58108140-58108159 None:intergenic 20.0%
!!! CTTACAAATTTTTTGTTTCT+TGG + chr5_3:58108485-58108504 Msa0820620:intron 20.0%
!!! ACTTATTTTATGTGCTATTT+TGG + chr5_3:58109068-58109087 Msa0820620:three_prime_UTR 20.0%
! TCATAGTAAGAGAAAACAAT+CGG - chr5_3:58101744-58101763 None:intergenic 25.0%
! TGGAAGAAAAAAATTGGAAA+AGG - chr5_3:58101781-58101800 None:intergenic 25.0%
!!! TGTTATGTTTCTCTGTTTTT+AGG + chr5_3:58101816-58101835 Msa0820620:intron 25.0%
!!! GTTATGTTTCTCTGTTTTTA+GGG + chr5_3:58101817-58101836 Msa0820620:intron 25.0%
!!! AGTGATTTTGACTTTGTTTT+AGG + chr5_3:58101886-58101905 Msa0820620:intron 25.0%
!!! AACCCTAATTTGTTTGAATT+TGG + chr5_3:58102077-58102096 Msa0820620:intron 25.0%
!! AGATTTAGAGCTACAAATTA+GGG - chr5_3:58102138-58102157 None:intergenic 25.0%
! AAGTTTATTTGCTTGAAATC+TGG + chr5_3:58102319-58102338 Msa0820620:intron 25.0%
! AGAATCATTCTACTAAATCT+GGG - chr5_3:58102585-58102604 None:intergenic 25.0%
! AAGAATCATTCTACTAAATC+TGG - chr5_3:58102586-58102605 None:intergenic 25.0%
!!! GATGTATGCTTTTGAAATTT+GGG + chr5_3:58103336-58103355 Msa0820620:intron 25.0%
!!! ATTTAACTTGACCTTTTTTC+AGG + chr5_3:58103385-58103404 Msa0820620:intron 25.0%
!!! TTTTATTTGTGTAGGCTAAA+AGG + chr5_3:58104142-58104161 Msa0820620:intron 25.0%
! ACAATTCCAAACAGTAAAAA+TGG - chr5_3:58104292-58104311 None:intergenic 25.0%
!! GTTGTTATTAATGAAGATGT+TGG + chr5_3:58104342-58104361 Msa0820620:intron 25.0%
!! CCTTCAATTCTTTTCAAATA+TGG - chr5_3:58104702-58104721 None:intergenic 25.0%
! CCATATTTGAAAAGAATTGA+AGG + chr5_3:58104699-58104718 Msa0820620:intron 25.0%
! ACTCATACATAATTGAGAAA+AGG + chr5_3:58104798-58104817 Msa0820620:intron 25.0%
! CACCTTATCTACATTAAATA+CGG - chr5_3:58104937-58104956 None:intergenic 25.0%
! AAGAAAAGAAAACAGAAAGT+AGG - chr5_3:58105000-58105019 None:intergenic 25.0%
!!! AATATTATTTGCTGTTTTGC+AGG + chr5_3:58105268-58105287 Msa0820620:intron 25.0%
!!! CATTCCTTATTTTTTTTTCC+TGG + chr5_3:58105427-58105446 Msa0820620:intron 25.0%
! ACAACCAGGAAAAAAAAATA+AGG - chr5_3:58105434-58105453 None:intergenic 25.0%
! AAATAATGGTGAATAGCAAT+GGG - chr5_3:58105607-58105626 None:intergenic 25.0%
! AACCTGTTAAAATAGAGAAA+TGG + chr5_3:58106098-58106117 Msa0820620:CDS 25.0%
! ACCTGTTAAAATAGAGAAAT+GGG + chr5_3:58106099-58106118 Msa0820620:CDS 25.0%
! AAAAAGCAAACAAAACAGAA+TGG - chr5_3:58106257-58106276 None:intergenic 25.0%
!! TTTTCTTCAAAGCAATCAAA+AGG - chr5_3:58106296-58106315 None:intergenic 25.0%
!!! TTTGATTGCTTTGAAGAAAA+CGG + chr5_3:58106296-58106315 Msa0820620:CDS 25.0%
!! TTACAAAAAGGTATATAGCA+TGG - chr5_3:58106470-58106489 None:intergenic 25.0%
!!! CAAACAAATGGATTACAAAA+AGG - chr5_3:58106482-58106501 None:intergenic 25.0%
!! GATTTTATTCTTTTGTAGCT+TGG + chr5_3:58106733-58106752 Msa0820620:intron 25.0%
!! TGTGAATGCTTAAATTTTAC+AGG + chr5_3:58106982-58107001 Msa0820620:intron 25.0%
! AATATCTTTGAATACAGATG+TGG - chr5_3:58107193-58107212 None:intergenic 25.0%
! ACATCTGTATTCAAAGATAT+TGG + chr5_3:58107192-58107211 Msa0820620:intron 25.0%
!!! GCTTAATTTATTTTTGGAGT+TGG + chr5_3:58107389-58107408 Msa0820620:intron 25.0%
! CTGAAAATTATGATATTGTC+TGG - chr5_3:58107473-58107492 None:intergenic 25.0%
!! CAGACAATATCATAATTTTC+AGG + chr5_3:58107471-58107490 Msa0820620:CDS 25.0%
! GAAATAGAATGGTAGAAAAT+TGG - chr5_3:58107508-58107527 None:intergenic 25.0%
! AATAAGTCGAAGAAATAGAA+TGG - chr5_3:58107519-58107538 None:intergenic 25.0%
! GTAAGCAATCATATATTTAC+AGG - chr5_3:58107753-58107772 None:intergenic 25.0%
!! CAAAAAAAATATGGTTAGCT+AGG - chr5_3:58107984-58108003 None:intergenic 25.0%
!!! CTAGCTAACCATATTTTTTT+TGG + chr5_3:58107982-58108001 Msa0820620:intron 25.0%
! CTGCAAAACCAAAAAAAATA+TGG - chr5_3:58107993-58108012 None:intergenic 25.0%
!!! CATATTTTTTTTGGTTTTGC+AGG + chr5_3:58107991-58108010 Msa0820620:intron 25.0%
! ACATGTAGAAATCATAATTC+CGG - chr5_3:58108047-58108066 None:intergenic 25.0%
!!! GTTAACCATTGATTTTCATT+TGG + chr5_3:58108206-58108225 Msa0820620:intron 25.0%
! CATGATAATTGCAAACAAAA+AGG - chr5_3:58108235-58108254 None:intergenic 25.0%
!!! CTTTTTGTTTGCAATTATCA+TGG + chr5_3:58108233-58108252 Msa0820620:intron 25.0%
! CACAACTAAAATAAGTATCA+TGG - chr5_3:58108274-58108293 None:intergenic 25.0%
! TTTGTTTGAATTATGTTTCC+TGG + chr5_3:58108427-58108446 Msa0820620:intron 25.0%
! TGCAAAGTAAATAACAAGTT+TGG - chr5_3:58108825-58108844 None:intergenic 25.0%
! TGGATGAATGTTAATATTTG+TGG + chr5_3:58108988-58109007 Msa0820620:three_prime_UTR 25.0%
! AAACTTCTTCAAGGTTAGTT+AGG + chr5_3:58101657-58101676 Msa0820620:intron 30.0%
! AACTTCTTCAAGGTTAGTTA+GGG + chr5_3:58101658-58101677 Msa0820620:intron 30.0%
!!! TTAGGGTTTTGTTGATGTTT+TGG + chr5_3:58101834-58101853 Msa0820620:intron 30.0%
!!! ATGTTTTGGTGTTGATTCTT+AGG + chr5_3:58101848-58101867 Msa0820620:intron 30.0%
!! TTTTTCTCTACTTTTGCATG+TGG + chr5_3:58101919-58101938 Msa0820620:intron 30.0%
! TGAGTTTTTCTGTTGTTGTA+TGG + chr5_3:58101959-58101978 Msa0820620:intron 30.0%
! TTTCTGTTGTTGTATGGTTT+TGG + chr5_3:58101965-58101984 Msa0820620:intron 30.0%
! CAGATTTAGAGCTACAAATT+AGG - chr5_3:58102139-58102158 None:intergenic 30.0%
!! CTAATTTGTAGCTCTAAATC+TGG + chr5_3:58102137-58102156 Msa0820620:intron 30.0%
TGTTGAACTTTATCTGTGTT+TGG + chr5_3:58102187-58102206 Msa0820620:intron 30.0%
GTTGAACTTTATCTGTGTTT+GGG + chr5_3:58102188-58102207 Msa0820620:intron 30.0%
TAACACATTATTCACCACAA+AGG - chr5_3:58102433-58102452 None:intergenic 30.0%
GAATCATTCAACATAACACA+AGG - chr5_3:58102539-58102558 None:intergenic 30.0%
TCTACTAAATCTGGGTAAAT+AGG - chr5_3:58102577-58102596 None:intergenic 30.0%
TAGTAGAATGATTCTTTCAG+AGG + chr5_3:58102590-58102609 Msa0820620:intron 30.0%
CTAAATCTACTTAAACATGC+TGG - chr5_3:58102642-58102661 None:intergenic 30.0%
!! TGTTCTGTTTTGTTAAGTGT+TGG + chr5_3:58103071-58103090 Msa0820620:intron 30.0%
!!! GTTGCTCTTTTTTATGAAGA+TGG + chr5_3:58103117-58103136 Msa0820620:CDS 30.0%
!!! GGATGTATGCTTTTGAAATT+TGG + chr5_3:58103335-58103354 Msa0820620:intron 30.0%
! AAAGCTGATTTCAACTTTGT+AGG - chr5_3:58103496-58103515 None:intergenic 30.0%
AGAATTATCAAGAAGCGATT+AGG + chr5_3:58103571-58103590 Msa0820620:CDS 30.0%
GAATTATCAAGAAGCGATTA+GGG + chr5_3:58103572-58103591 Msa0820620:CDS 30.0%
TCTTTGTAATAATCTACTGC+AGG + chr5_3:58103697-58103716 Msa0820620:intron 30.0%
CTTTGTAATAATCTACTGCA+GGG + chr5_3:58103698-58103717 Msa0820620:intron 30.0%
TTTGTAATAATCTACTGCAG+GGG + chr5_3:58103699-58103718 Msa0820620:intron 30.0%
TGAAATTCTTAGGATCATTG+TGG - chr5_3:58103752-58103771 None:intergenic 30.0%
CAATGATCCTAAGAATTTCA+CGG + chr5_3:58103752-58103771 Msa0820620:CDS 30.0%
! AAAGGACTCTAAAGAATTTG+AGG + chr5_3:58104160-58104179 Msa0820620:CDS 30.0%
! AGTAATTTTGTACTCTTGGT+TGG - chr5_3:58104202-58104221 None:intergenic 30.0%
! AACCAAGAGTACAAAATTAC+TGG + chr5_3:58104201-58104220 Msa0820620:CDS 30.0%
! AACCAGTAATTTTGTACTCT+TGG - chr5_3:58104206-58104225 None:intergenic 30.0%
AATGAAGATGTTGGTATTGT+AGG + chr5_3:58104351-58104370 Msa0820620:intron 30.0%
ATCTGCCATGTATTAATGTT+GGG + chr5_3:58104483-58104502 Msa0820620:CDS 30.0%
CTCCGTATTTAATGTAGATA+AGG + chr5_3:58104932-58104951 Msa0820620:intron 30.0%
! GCTTGACAATTCATTTTCTA+TGG + chr5_3:58104956-58104975 Msa0820620:intron 30.0%
!!! TTTTACTTAGCTTTGCTCAT+TGG + chr5_3:58105084-58105103 Msa0820620:intron 30.0%
TGTGGAATTTCAATAACATC+TGG + chr5_3:58105335-58105354 Msa0820620:CDS 30.0%
TAATAAAAGCAGAATACCCT+AGG - chr5_3:58105395-58105414 None:intergenic 30.0%
ACTAACAGCTTCTCAATAAA+GGG - chr5_3:58105463-58105482 None:intergenic 30.0%
TACTAACAGCTTCTCAATAA+AGG - chr5_3:58105464-58105483 None:intergenic 30.0%
!! TCTTTTGTTGAGCTATTTTC+AGG + chr5_3:58105484-58105503 Msa0820620:intron 30.0%
CAAATAATGGTGAATAGCAA+TGG - chr5_3:58105608-58105627 None:intergenic 30.0%
! TTTGACTTACAGTTGAAGTT+TGG + chr5_3:58105923-58105942 Msa0820620:intron 30.0%
TTGACTTACAGTTGAAGTTT+GGG + chr5_3:58105924-58105943 Msa0820620:intron 30.0%
ATAAAATGTGGAGGAATGAA+AGG + chr5_3:58106175-58106194 Msa0820620:CDS 30.0%
ATTTACTGACAAGCATAGAA+AGG + chr5_3:58106223-58106242 Msa0820620:intron 30.0%
AAAAAGAATCTTGCAGAGTT+TGG + chr5_3:58106547-58106566 Msa0820620:CDS 30.0%
ATTGATCTTCAGCAAAACAT+TGG - chr5_3:58106623-58106642 None:intergenic 30.0%
! TTTATTCTTTTGTAGCTTGG+CGG + chr5_3:58106736-58106755 Msa0820620:intron 30.0%
!!! TAGGAGCTTTTGAAACAATA+GGG - chr5_3:58106801-58106820 None:intergenic 30.0%
GCCCTTGATATCTAAATATA+GGG + chr5_3:58107024-58107043 Msa0820620:CDS 30.0%
GCCCTATATTTAGATATCAA+GGG - chr5_3:58107028-58107047 None:intergenic 30.0%
TGCCCTATATTTAGATATCA+AGG - chr5_3:58107029-58107048 None:intergenic 30.0%
!! GCAAACTTTGAAACAGTATA+GGG - chr5_3:58107339-58107358 None:intergenic 30.0%
!! AGCAAACTTTGAAACAGTAT+AGG - chr5_3:58107340-58107359 None:intergenic 30.0%
!!! AGTTGGTTTTATGATATGCA+GGG + chr5_3:58107406-58107425 Msa0820620:intron 30.0%
TCAGTTCAATGTTCAAAACT+TGG - chr5_3:58107697-58107716 None:intergenic 30.0%
ATTTGACAACCTCAATGATT+TGG - chr5_3:58107721-58107740 None:intergenic 30.0%
ATATATGATTGCTTACTTGG+TGG + chr5_3:58107757-58107776 Msa0820620:intron 30.0%
TATATGATTGCTTACTTGGT+GGG + chr5_3:58107758-58107777 Msa0820620:intron 30.0%
! CTTTTCATCAAGAAATTTGC+AGG - chr5_3:58107811-58107830 None:intergenic 30.0%
GCAAATTTCTTGATGAAAAG+TGG + chr5_3:58107811-58107830 Msa0820620:CDS 30.0%
CAACAATCACCATAAATTTG+GGG - chr5_3:58107839-58107858 None:intergenic 30.0%
GCAACAATCACCATAAATTT+GGG - chr5_3:58107840-58107859 None:intergenic 30.0%
ATGTAGAAATCATAATTCCG+GGG - chr5_3:58108045-58108064 None:intergenic 30.0%
CATGTAGAAATCATAATTCC+GGG - chr5_3:58108046-58108065 None:intergenic 30.0%
GGATTCCAAATGAAAATCAA+TGG - chr5_3:58108214-58108233 None:intergenic 30.0%
! AAAAGGACATGATAATGAGT+TGG - chr5_3:58108324-58108343 None:intergenic 30.0%
! AACTCATTATCATGTCCTTT+TGG + chr5_3:58108323-58108342 Msa0820620:CDS 30.0%
CATAACTCAAACAAAGAACA+TGG - chr5_3:58108792-58108811 None:intergenic 30.0%
! CATGTTCTTTGTTTGAGTTA+TGG + chr5_3:58108790-58108809 Msa0820620:exon 30.0%
TTCTCTCTCAAACTTCTTCA+AGG + chr5_3:58101648-58101667 Msa0820620:five_prime_UTR 35.0%
GAGAAAACAATCGGAAGAAT+CGG - chr5_3:58101735-58101754 None:intergenic 35.0%
! AATCTGGTGTGATTTTGTGT+TGG + chr5_3:58102335-58102354 Msa0820620:intron 35.0%
! TTTTCATGTTTGTGCCTTTG+TGG + chr5_3:58102416-58102435 Msa0820620:intron 35.0%
TAACCTAATAAGCTCTGTTC+AGG + chr5_3:58102765-58102784 Msa0820620:intron 35.0%
TTTCCTGAACAGAGCTTATT+AGG - chr5_3:58102771-58102790 None:intergenic 35.0%
AATAAGCTCTGTTCAGGAAA+TGG + chr5_3:58102771-58102790 Msa0820620:intron 35.0%
ATAAGCTCTGTTCAGGAAAT+GGG + chr5_3:58102772-58102791 Msa0820620:intron 35.0%
!! AGCTTTTTCTTAACTGTGTG+CGG - chr5_3:58102874-58102893 None:intergenic 35.0%
! TTGAAGTGATTTGTAAGCAG+AGG - chr5_3:58102952-58102971 None:intergenic 35.0%
GTGAATGTTACTAACACTGA+TGG + chr5_3:58102973-58102992 Msa0820620:CDS 35.0%
ATACGATACTTACACTGTAC+TGG - chr5_3:58103008-58103027 None:intergenic 35.0%
! AGTACAGTGTAAGTATCGTA+TGG + chr5_3:58103007-58103026 Msa0820620:intron 35.0%
GACAGAGTTCAAGAAACTTA+TGG + chr5_3:58103180-58103199 Msa0820620:CDS 35.0%
!! ACTTATGGTTCTGAGCTTAA+TGG + chr5_3:58103195-58103214 Msa0820620:CDS 35.0%
!! CTTATGGTTCTGAGCTTAAT+GGG + chr5_3:58103196-58103215 Msa0820620:CDS 35.0%
GAGAAGACTCTGTTTACTAT+TGG + chr5_3:58103240-58103259 Msa0820620:CDS 35.0%
! TTGAAGATGTCACTTCAAAC+AGG + chr5_3:58103301-58103320 Msa0820620:CDS 35.0%
! TTCAAACAGGTTGAAATGTG+TGG + chr5_3:58103314-58103333 Msa0820620:intron 35.0%
!!! TGACCTTTTTTCAGGAACAA+CGG + chr5_3:58103393-58103412 Msa0820620:intron 35.0%
CAACTTTGTAGGTCTTTGAT+CGG - chr5_3:58103485-58103504 None:intergenic 35.0%
GATCATTGTGGAAGAAATTC+TGG - chr5_3:58103740-58103759 None:intergenic 35.0%
GATGAGAATACAGACAGAAA+AGG - chr5_3:58103872-58103891 None:intergenic 35.0%
TTATTCCAGTCAAGACTGAA+AGG - chr5_3:58104012-58104031 None:intergenic 35.0%
TTTCAGTCTTGACTGGAATA+AGG + chr5_3:58104011-58104030 Msa0820620:CDS 35.0%
GAGCAATTGAGCATAACAAA+TGG - chr5_3:58104084-58104103 None:intergenic 35.0%
ATATACAAAGGATCAGGTCT+AGG - chr5_3:58104123-58104142 None:intergenic 35.0%
!! TTTTGTACTCTTGGTTGGTT+GGG - chr5_3:58104197-58104216 None:intergenic 35.0%
! ATTTTGTACTCTTGGTTGGT+TGG - chr5_3:58104198-58104217 None:intergenic 35.0%
GGGATAGAAAAAATTACAGC+TGG - chr5_3:58104251-58104270 None:intergenic 35.0%
!! GCGTATCCATTTTTACTGTT+TGG + chr5_3:58104283-58104302 Msa0820620:intron 35.0%
! ACTGCAGAGAAATTTTTCTG+CGG - chr5_3:58104454-58104473 None:intergenic 35.0%
GATCTGCCATGTATTAATGT+TGG + chr5_3:58104482-58104501 Msa0820620:CDS 35.0%
GCCTTAAAAACAAGTGACTA+TGG + chr5_3:58105290-58105309 Msa0820620:CDS 35.0%
!!! GCCATAGTCACTTGTTTTTA+AGG - chr5_3:58105294-58105313 None:intergenic 35.0%
GAGCTAACTAACTATCAAAC+AGG - chr5_3:58105573-58105592 None:intergenic 35.0%
TGATAGTTAGTTAGCTCACA+TGG + chr5_3:58105576-58105595 Msa0820620:intron 35.0%
! TGCAAAATACTTGCTACTGA+TGG + chr5_3:58105879-58105898 Msa0820620:intron 35.0%
TTACAGTTGAAGTTTGGGAA+TGG + chr5_3:58105929-58105948 Msa0820620:intron 35.0%
AAGACTTCAATCCCAGAAAT+GGG + chr5_3:58105954-58105973 Msa0820620:CDS 35.0%
GAGATGGAACTTCAATAACA+AGG + chr5_3:58105976-58105995 Msa0820620:CDS 35.0%
! TAACAGGTTGCACAATTTTC+TGG - chr5_3:58106087-58106106 None:intergenic 35.0%
!!! GCCCATTTCTCTATTTTAAC+AGG - chr5_3:58106103-58106122 None:intergenic 35.0%
!! TAAAATAGAGAAATGGGCTG+TGG + chr5_3:58106105-58106124 Msa0820620:CDS 35.0%
GTAAGGGATCTGATAAAATG+TGG + chr5_3:58106163-58106182 Msa0820620:CDS 35.0%
!!! ATTTTTTCAACTCTGACCAG+AGG - chr5_3:58106341-58106360 None:intergenic 35.0%
AGGAAGAACTCTGATCTTTA+TGG + chr5_3:58106425-58106444 Msa0820620:CDS 35.0%
! ATTTGAAATGTGAAGGTCCA+TGG + chr5_3:58106521-58106540 Msa0820620:intron 35.0%
! GCAAGATTCTTTTTCTTCCA+TGG - chr5_3:58106541-58106560 None:intergenic 35.0%
TTTGCTGAAGATCAATGCAA+AGG + chr5_3:58106627-58106646 Msa0820620:CDS 35.0%
! AGGTATTTTCACTCTTCCTT+TGG + chr5_3:58106647-58106666 Msa0820620:intron 35.0%
GTAGTACGAAAGGAAATTTC+TGG - chr5_3:58106705-58106724 None:intergenic 35.0%
TCCTTTCGTACTACAATTGA+AGG + chr5_3:58106711-58106730 Msa0820620:intron 35.0%
TCCTTCAATTGTAGTACGAA+AGG - chr5_3:58106715-58106734 None:intergenic 35.0%
! TTTGAAACAATAGGGATGGA+TGG - chr5_3:58106793-58106812 None:intergenic 35.0%
!!! AGCTTTTGAAACAATAGGGA+TGG - chr5_3:58106797-58106816 None:intergenic 35.0%
!!! GTAGGAGCTTTTGAAACAAT+AGG - chr5_3:58106802-58106821 None:intergenic 35.0%
! AAAAGCTCCTACTCTCATTT+TGG + chr5_3:58106810-58106829 Msa0820620:CDS 35.0%
! AAAGCTCCTACTCTCATTTT+GGG + chr5_3:58106811-58106830 Msa0820620:CDS 35.0%
! TTTTACAGGTTGTAAGCTCA+AGG + chr5_3:58106996-58107015 Msa0820620:intron 35.0%
GGCCCTTGATATCTAAATAT+AGG + chr5_3:58107023-58107042 Msa0820620:CDS 35.0%
AGGAGGATGAAGGAATAATA+AGG + chr5_3:58107113-58107132 Msa0820620:CDS 35.0%
AGATGTGGACCAAATAGATA+TGG - chr5_3:58107178-58107197 None:intergenic 35.0%
TTACAACAGTTCTCACTTGA+TGG + chr5_3:58107367-58107386 Msa0820620:intron 35.0%
!!! GAGTTGGTTTTATGATATGC+AGG + chr5_3:58107405-58107424 Msa0820620:intron 35.0%
TTCAGTAAAGCACAACAGAA+GGG - chr5_3:58107619-58107638 None:intergenic 35.0%
!! TCCTTTTTGCTGATTGATGT+AGG + chr5_3:58107645-58107664 Msa0820620:intron 35.0%
!! CCTTTTTGCTGATTGATGTA+GGG + chr5_3:58107646-58107665 Msa0820620:intron 35.0%
AAAGTGGAACCCCAAATTTA+TGG + chr5_3:58107827-58107846 Msa0820620:CDS 35.0%
GGCAACAATCACCATAAATT+TGG - chr5_3:58107841-58107860 None:intergenic 35.0%
CTTTGTGTGATGATTCTTCT+GGG - chr5_3:58107862-58107881 None:intergenic 35.0%
ACTTTGTGTGATGATTCTTC+TGG - chr5_3:58107863-58107882 None:intergenic 35.0%
AGTTGTGAAAATCTGTTCTC+AGG + chr5_3:58108287-58108306 Msa0820620:intron 35.0%
GTTGTGAAAATCTGTTCTCA+GGG + chr5_3:58108288-58108307 Msa0820620:intron 35.0%
AAAAGCCAATCTCATCCAAA+AGG - chr5_3:58108341-58108360 None:intergenic 35.0%
!!! ATTTTTTGTTTCTTGGCCAC+AGG + chr5_3:58108492-58108511 Msa0820620:intron 35.0%
CAGACATTGTCCATCAATTT+GGG - chr5_3:58108764-58108783 None:intergenic 35.0%
CAACAAGTATTCTCAAACCA+AGG - chr5_3:58109027-58109046 None:intergenic 35.0%
GGTTTGAACTTGACTGTTTC+AGG + chr5_3:58102672-58102691 Msa0820620:intron 40.0%
! TGATTGGTTCAAGATCTGCT+GGG - chr5_3:58102843-58102862 None:intergenic 40.0%
! TTGATTGGTTCAAGATCTGC+TGG - chr5_3:58102844-58102863 None:intergenic 40.0%
TAAGAAAAAGCTTCCCACCA+AGG + chr5_3:58102882-58102901 Msa0820620:CDS 40.0%
! TAAGTATCGTATGGTGCAGT+TGG + chr5_3:58103016-58103035 Msa0820620:intron 40.0%
!!! GACCTTTTTTCAGGAACAAC+GGG + chr5_3:58103394-58103413 Msa0820620:intron 40.0%
TTCCCGTTGTTCCTGAAAAA+AGG - chr5_3:58103399-58103418 None:intergenic 40.0%
GAAGTCCAAATGATACTGAC+AGG + chr5_3:58103439-58103458 Msa0820620:CDS 40.0%
CTCTTCCTGTCAGTATCATT+TGG - chr5_3:58103447-58103466 None:intergenic 40.0%
CAAATGATACTGACAGGAAG+AGG + chr5_3:58103445-58103464 Msa0820620:CDS 40.0%
CCATCGCTAATGCCTTAAAA+GGG + chr5_3:58103538-58103557 Msa0820620:CDS 40.0%
! CTCAGTTTCATGCCCTTTTA+AGG - chr5_3:58103553-58103572 None:intergenic 40.0%
CCTACATCCGTGAAATTCTT+AGG - chr5_3:58103762-58103781 None:intergenic 40.0%
CCTAAGAATTTCACGGATGT+AGG + chr5_3:58103759-58103778 Msa0820620:CDS 40.0%
AAGAATTTCACGGATGTAGG+AGG + chr5_3:58103762-58103781 Msa0820620:CDS 40.0%
!! AGTGGGCTGTCTTTGAATAT+AGG + chr5_3:58103834-58103853 Msa0820620:CDS 40.0%
ACAACCATGATTGTTCATCC+TGG + chr5_3:58103943-58103962 Msa0820620:CDS 40.0%
CAACCATGATTGTTCATCCT+GGG + chr5_3:58103944-58103963 Msa0820620:CDS 40.0%
GCAATCAAGAAATCAACCAC+AGG - chr5_3:58103970-58103989 None:intergenic 40.0%
TGAAAGGATCTCTCACATTC+TGG - chr5_3:58103996-58104015 None:intergenic 40.0%
! AAAGGATCAGGTCTAGGTTT+TGG - chr5_3:58104117-58104136 None:intergenic 40.0%
!! AATTACAGCTGGTCTTTGCA+AGG - chr5_3:58104240-58104259 None:intergenic 40.0%
GGATACGCATCAACAGAAAT+GGG - chr5_3:58104271-58104290 None:intergenic 40.0%
TGGATACGCATCAACAGAAA+TGG - chr5_3:58104272-58104291 None:intergenic 40.0%
! GTAGTTGCTGTTCTTCATGA+TGG + chr5_3:58104317-58104336 Msa0820620:intron 40.0%
GGCTTCCCAACATTAATACA+TGG - chr5_3:58104491-58104510 None:intergenic 40.0%
GCATCTAAGTTACCTCAACT+GGG - chr5_3:58104532-58104551 None:intergenic 40.0%
AGCATCTAAGTTACCTCAAC+TGG - chr5_3:58104533-58104552 None:intergenic 40.0%
! TTGCTTAGGCACAAGCTTTT+GGG - chr5_3:58104906-58104925 None:intergenic 40.0%
! ATACGGAGAAAGACTTGCTT+AGG - chr5_3:58104920-58104939 None:intergenic 40.0%
!! AGATCTTTGAAGTGTGGACA+GGG - chr5_3:58105134-58105153 None:intergenic 40.0%
!! AAGATCTTTGAAGTGTGGAC+AGG - chr5_3:58105135-58105154 None:intergenic 40.0%
!! AAGGGAAGATCTTTGAAGTG+TGG - chr5_3:58105140-58105159 None:intergenic 40.0%
ACTTCAAAGATCTTCCCTTG+TGG + chr5_3:58105141-58105160 Msa0820620:CDS 40.0%
ATTCCACAGTTACGTAGCAT+GGG - chr5_3:58105323-58105342 None:intergenic 40.0%
AATTCCACAGTTACGTAGCA+TGG - chr5_3:58105324-58105343 None:intergenic 40.0%
ATAAAGGGTGAATGACAACC+AGG - chr5_3:58105448-58105467 None:intergenic 40.0%
ACATGCATTCAGCTTACAGA+TGG - chr5_3:58105809-58105828 None:intergenic 40.0%
GAAGACTTCAATCCCAGAAA+TGG + chr5_3:58105953-58105972 Msa0820620:CDS 40.0%
AAGTTCCATCTCCCATTTCT+GGG - chr5_3:58105968-58105987 None:intergenic 40.0%
AGGGATCTGATAAAATGTGG+AGG + chr5_3:58106166-58106185 Msa0820620:CDS 40.0%
TTGAAGAAAACGGCCAGTTT+AGG + chr5_3:58106306-58106325 Msa0820620:CDS 40.0%
ACGTTCAGTCTAAACTACCA+GGG + chr5_3:58106369-58106388 Msa0820620:CDS 40.0%
AGCAGACAAAGGAGAAACTT+AGG - chr5_3:58106398-58106417 None:intergenic 40.0%
GCAAAACATTGGTCAGATAC+TGG - chr5_3:58106612-58106631 None:intergenic 40.0%
GTTCAAGCCAGTATCAGATA+AGG + chr5_3:58107093-58107112 Msa0820620:CDS 40.0%
TCATCCTCCTTATCTGATAC+TGG - chr5_3:58107103-58107122 None:intergenic 40.0%
GTATCAGATAAGGAGGATGA+AGG + chr5_3:58107103-58107122 Msa0820620:CDS 40.0%
GTTCAGTAAAGCACAACAGA+AGG - chr5_3:58107620-58107639 None:intergenic 40.0%
CCCTACATCAATCAGCAAAA+AGG - chr5_3:58107649-58107668 None:intergenic 40.0%
! TTTGCTGATTGATGTAGGGA+TGG + chr5_3:58107650-58107669 Msa0820620:intron 40.0%
TGAACTGAGCCAAATCATTG+AGG + chr5_3:58107709-58107728 Msa0820620:CDS 40.0%
ACAACAAAATCTGTCATCCC+CGG + chr5_3:58108025-58108044 Msa0820620:CDS 40.0%
! ATGATAATGAGTTGGCCTAC+TGG - chr5_3:58108316-58108335 None:intergenic 40.0%
! CATGTCCTTTTGGATGAGAT+TGG + chr5_3:58108333-58108352 Msa0820620:CDS 40.0%
ACAAGCTCTTGAAGATCATC+TGG - chr5_3:58108366-58108385 None:intergenic 40.0%
CTCTCTCTCATATGTGTAAG+TGG + chr5_3:58108389-58108408 Msa0820620:intron 40.0%
TCATTGAGCATCTGAATACC+AGG - chr5_3:58108448-58108467 None:intergenic 40.0%
AGTACTACTGCTATCTCTGT+TGG + chr5_3:58108524-58108543 Msa0820620:CDS 40.0%
! TCTGAAACTTCATCTAGCCA+TGG + chr5_3:58108695-58108714 Msa0820620:CDS 40.0%
GCAGACATTGTCCATCAATT+TGG - chr5_3:58108765-58108784 None:intergenic 40.0%
AGAGTGTGATATCATCGCAC+TGG - chr5_3:58101515-58101534 None:intergenic 45.0%
TCAAGATCTGCTGGGACAAT+GGG - chr5_3:58102835-58102854 None:intergenic 45.0%
TTCAAGATCTGCTGGGACAA+TGG - chr5_3:58102836-58102855 None:intergenic 45.0%
GGAAAGACCTTGCGTATGAT+GGG + chr5_3:58103217-58103236 Msa0820620:CDS 45.0%
GAAAGACCTTGCGTATGATG+GGG + chr5_3:58103218-58103237 Msa0820620:CDS 45.0%
TTGGACTTCCATGTCCATCA+GGG - chr5_3:58103428-58103447 None:intergenic 45.0%
TTTGGACTTCCATGTCCATC+AGG - chr5_3:58103429-58103448 None:intergenic 45.0%
GCCATCGCTAATGCCTTAAA+AGG + chr5_3:58103537-58103556 Msa0820620:CDS 45.0%
!!! CCCTTTTAAGGCATTAGCGA+TGG - chr5_3:58103541-58103560 None:intergenic 45.0%
AATTTCACGGATGTAGGAGG+TGG + chr5_3:58103765-58103784 Msa0820620:CDS 45.0%
GAGATCCTTTCAGTCTTGAC+TGG + chr5_3:58104004-58104023 Msa0820620:CDS 45.0%
! AGGTTCACTCTGAAGAAGAG+AGG + chr5_3:58104371-58104390 Msa0820620:intron 45.0%
TCCTCTGTATCATCTTCTCC+GGG - chr5_3:58104404-58104423 None:intergenic 45.0%
CTCCTCTGTATCATCTTCTC+CGG - chr5_3:58104405-58104424 None:intergenic 45.0%
ACCAACATTTGTCCCAGTTG+AGG + chr5_3:58104517-58104536 Msa0820620:CDS 45.0%
ACCTCAACTGGGACAAATGT+TGG - chr5_3:58104521-58104540 None:intergenic 45.0%
! AGCTTTTGGGCACATGACTT+AGG - chr5_3:58104893-58104912 None:intergenic 45.0%
! CTTGCTTAGGCACAAGCTTT+TGG - chr5_3:58104907-58104926 None:intergenic 45.0%
! GGCTTTGGTATAGCGTTGAA+GGG - chr5_3:58105113-58105132 None:intergenic 45.0%
CTTCCCTTGTGGAAAAGTCT+AGG + chr5_3:58105152-58105171 Msa0820620:CDS 45.0%
! CTGCCTAGACTTTTCCACAA+GGG - chr5_3:58105158-58105177 None:intergenic 45.0%
! TCTGCCTAGACTTTTCCACA+AGG - chr5_3:58105159-58105178 None:intergenic 45.0%
! TCTGGCTTCACACAAGTTGA+CGG + chr5_3:58105353-58105372 Msa0820620:CDS 45.0%
TCAATCCCAGAAATGGGAGA+TGG + chr5_3:58105960-58105979 Msa0820620:CDS 45.0%
GAAGTTCCATCTCCCATTTC+TGG - chr5_3:58105969-58105988 None:intergenic 45.0%
TGATGTGCGAGGACTTGTAA+GGG + chr5_3:58106147-58106166 Msa0820620:CDS 45.0%
! TTTTCAACTCTGACCAGAGG+TGG - chr5_3:58106338-58106357 None:intergenic 45.0%
CACGTTCAGTCTAAACTACC+AGG + chr5_3:58106368-58106387 Msa0820620:CDS 45.0%
CGTTCAGTCTAAACTACCAG+GGG + chr5_3:58106370-58106389 Msa0820620:CDS 45.0%
AGATCAGAGTTCTTCCTCTC+AGG - chr5_3:58106422-58106441 None:intergenic 45.0%
TCAGTGTATTGCTCCTACCA+GGG + chr5_3:58106579-58106598 Msa0820620:CDS 45.0%
! GGCGGCATGAATTCTCTTTT+AGG + chr5_3:58106754-58106773 Msa0820620:CDS 45.0%
! TCCTACTCTCATTTTGGGCA+TGG + chr5_3:58106816-58106835 Msa0820620:CDS 45.0%
TCCATGCCCAAAATGAGAGT+AGG - chr5_3:58106820-58106839 None:intergenic 45.0%
TTGGGCATGGATGTTTCTCA+TGG + chr5_3:58106829-58106848 Msa0820620:CDS 45.0%
GATGTTTCTCATGGTTCACC+TGG + chr5_3:58106838-58106857 Msa0820620:CDS 45.0%
GAGGGAATTTCAGTTTGTCC+AGG - chr5_3:58106859-58106878 None:intergenic 45.0%
TGAAATTCCCTCGATTGCTG+CGG + chr5_3:58106867-58106886 Msa0820620:CDS 45.0%
ATTGTTACCGCAGCAATCGA+GGG - chr5_3:58106877-58106896 None:intergenic 45.0%
TATTGTTACCGCAGCAATCG+AGG - chr5_3:58106878-58106897 None:intergenic 45.0%
AGGTTGTAAGCTCAAGGCAA+TGG + chr5_3:58107002-58107021 Msa0820620:intron 45.0%
CAAGCCAGTATCAGATAAGG+AGG + chr5_3:58107096-58107115 Msa0820620:CDS 45.0%
!! TGGTTTTGCAGGTACTGTTG+TGG + chr5_3:58108002-58108021 Msa0820620:intron 45.0%
TTCTACATGTGTGCTCATGC+TGG + chr5_3:58108057-58108076 Msa0820620:CDS 45.0%
TAGTACTCCTCTGATACCTG+TGG - chr5_3:58108511-58108530 None:intergenic 45.0%
TCCAATCTGCTATGCCCATT+TGG + chr5_3:58108631-58108650 Msa0820620:CDS 45.0%
CACTTGAGAAGCAGCCAAAT+GGG - chr5_3:58108648-58108667 None:intergenic 45.0%
CATTTGGCTGCTTCTCAAGT+GGG + chr5_3:58108647-58108666 Msa0820620:CDS 45.0%
GAAACTTCATCTAGCCATGG+TGG + chr5_3:58108698-58108717 Msa0820620:CDS 45.0%
AATTTGGGCAACTGTGGGAT+GGG - chr5_3:58108749-58108768 None:intergenic 45.0%
CCATCAATTTGGGCAACTGT+GGG - chr5_3:58108754-58108773 None:intergenic 45.0%
TCCATCAATTTGGGCAACTG+TGG - chr5_3:58108755-58108774 None:intergenic 45.0%
GATGAACCTTTGCTGATGTC+TGG + chr5_3:58108869-58108888 Msa0820620:three_prime_UTR 45.0%
!! GTGGTTTGCTGAAAGATCCT+TGG + chr5_3:58109007-58109026 Msa0820620:three_prime_UTR 45.0%
!! TTATTTAATATAAAATAACA+AGG + chr5_3:58103665-58103684 Msa0820620:intron 5.0%
!! TATTTAATATAAAATAACAA+GGG + chr5_3:58103666-58103685 Msa0820620:intron 5.0%
GTGTGCGGCTCAATCTTGAT+TGG - chr5_3:58102859-58102878 None:intergenic 50.0%
CTTGCCATTGGAACCTTGGT+GGG - chr5_3:58102898-58102917 None:intergenic 50.0%
TCTTGCCATTGGAACCTTGG+TGG - chr5_3:58102899-58102918 None:intergenic 50.0%
ACGTCTTGCCATTGGAACCT+TGG - chr5_3:58102902-58102921 None:intergenic 50.0%
AAGGTTCCAATGGCAAGACG+TGG + chr5_3:58102901-58102920 Msa0820620:CDS 50.0%
CAGCACCCTTTCCTTCAACA+GGG - chr5_3:58103146-58103165 None:intergenic 50.0%
GGGAAAGACCTTGCGTATGA+TGG + chr5_3:58103216-58103235 Msa0820620:CDS 50.0%
TCTTCTCCCCATCATACGCA+AGG - chr5_3:58103227-58103246 None:intergenic 50.0%
! AATGCTAGCCCTGATGGACA+TGG + chr5_3:58103417-58103436 Msa0820620:CDS 50.0%
GATGTAGGAGGTGGTGTTCT+TGG + chr5_3:58103774-58103793 Msa0820620:CDS 50.0%
GTGGTGTTCTTGGATGCAGA+GGG + chr5_3:58103784-58103803 Msa0820620:CDS 50.0%
ACTTTGTGTGGTCCTGAAGC+TGG - chr5_3:58103817-58103836 None:intergenic 50.0%
AGCTTCAGGACCACACAAAG+TGG + chr5_3:58103816-58103835 Msa0820620:CDS 50.0%
GCTTCAGGACCACACAAAGT+GGG + chr5_3:58103817-58103836 Msa0820620:CDS 50.0%
CAAAGACAGCCCACTTTGTG+TGG - chr5_3:58103829-58103848 None:intergenic 50.0%
AGGCCCAGGATGAACAATCA+TGG - chr5_3:58103950-58103969 None:intergenic 50.0%
AAGAAATCAACCACAGGCCC+AGG - chr5_3:58103964-58103983 None:intergenic 50.0%
!! AAGAAGAGAGGTGCTGTTCC+CGG + chr5_3:58104383-58104402 Msa0820620:CDS 50.0%
TCCCGGAGAAGATGATACAG+AGG + chr5_3:58104400-58104419 Msa0820620:CDS 50.0%
GGGACAAATGTTGGTCGCTT+TGG - chr5_3:58104512-58104531 None:intergenic 50.0%
! GGGCTTTGGTATAGCGTTGA+AGG - chr5_3:58105114-58105133 None:intergenic 50.0%
TTGAAGTGTGGACAGGGCTT+TGG - chr5_3:58105128-58105147 None:intergenic 50.0%
! CTGGCTTCACACAAGTTGAC+GGG + chr5_3:58105354-58105373 Msa0820620:CDS 50.0%
! CTTCACACAAGTTGACGGGA+GGG + chr5_3:58105358-58105377 Msa0820620:CDS 50.0%
! AGTCTGCTGAATGTGCTGCT+TGG + chr5_3:58105721-58105740 Msa0820620:intron 50.0%
AAGTCCTCGCACATCACAAC+GGG - chr5_3:58106143-58106162 None:intergenic 50.0%
CAAGTCCTCGCACATCACAA+CGG - chr5_3:58106144-58106163 None:intergenic 50.0%
GTGATGTGCGAGGACTTGTA+AGG + chr5_3:58106146-58106165 Msa0820620:CDS 50.0%
TCCTTTGTCTGCTTCCTGAG+AGG + chr5_3:58106405-58106424 Msa0820620:CDS 50.0%
TCCTCTCAGGAAGCAGACAA+AGG - chr5_3:58106409-58106428 None:intergenic 50.0%
CTCAGTGTATTGCTCCTACC+AGG + chr5_3:58106578-58106597 Msa0820620:CDS 50.0%
CAACCTTAGCACCCTGAGTT+CGG - chr5_3:58107057-58107076 None:intergenic 50.0%
CACACAAAGTTCTTCCAGCC+TGG + chr5_3:58107873-58107892 Msa0820620:CDS 50.0%
! TCACCAGGAGGCACATTATC+CGG - chr5_3:58107903-58107922 None:intergenic 50.0%
! TCTGTTCTCAGGGTACCAGT+AGG + chr5_3:58108298-58108317 Msa0820620:intron 50.0%
TTCTTGGCCACAGGTATCAG+AGG + chr5_3:58108501-58108520 Msa0820620:intron 50.0%
GCCAAATGGGCATAGCAGAT+TGG - chr5_3:58108635-58108654 None:intergenic 50.0%
CCACTTGAGAAGCAGCCAAA+TGG - chr5_3:58108649-58108668 None:intergenic 50.0%
CCATTTGGCTGCTTCTCAAG+TGG + chr5_3:58108646-58108665 Msa0820620:CDS 50.0%
CAATTTGGGCAACTGTGGGA+TGG - chr5_3:58108750-58108769 None:intergenic 50.0%
CCCACAGTTGCCCAAATTGA+TGG + chr5_3:58108751-58108770 Msa0820620:CDS 50.0%
GAACCTTTGCTGATGTCTGG+TGG + chr5_3:58108872-58108891 Msa0820620:three_prime_UTR 50.0%
CATCCACCAGACATCAGCAA+AGG - chr5_3:58108878-58108897 None:intergenic 50.0%
GATGACCTTTGCTGCAAGGT+CGG + chr5_3:58108894-58108913 Msa0820620:three_prime_UTR 50.0%
ATGACCTTTGCTGCAAGGTC+GGG + chr5_3:58108895-58108914 Msa0820620:three_prime_UTR 50.0%
AAAACCCGACCTTGCAGCAA+AGG - chr5_3:58108902-58108921 None:intergenic 50.0%
AGATCTGCTGGGACAATGGG+AGG - chr5_3:58102832-58102851 None:intergenic 55.0%
GCTTCCCACCAAGGTTCCAA+TGG + chr5_3:58102891-58102910 Msa0820620:CDS 55.0%
TCCAATGGCAAGACGTGGAC+TGG + chr5_3:58102906-58102925 Msa0820620:CDS 55.0%
CCAATGGCAAGACGTGGACT+GGG + chr5_3:58102907-58102926 Msa0820620:CDS 55.0%
GAAGATGGACGCCCTGTTGA+AGG + chr5_3:58103132-58103151 Msa0820620:CDS 55.0%
TGGACGCCCTGTTGAAGGAA+AGG + chr5_3:58103137-58103156 Msa0820620:CDS 55.0%
GGACGCCCTGTTGAAGGAAA+GGG + chr5_3:58103138-58103157 Msa0820620:CDS 55.0%
CCAGCACCCTTTCCTTCAAC+AGG - chr5_3:58103147-58103166 None:intergenic 55.0%
! CCTGTTGAAGGAAAGGGTGC+TGG + chr5_3:58103144-58103163 Msa0820620:CDS 55.0%
!! TTGAAGGAAAGGGTGCTGGC+AGG + chr5_3:58103148-58103167 Msa0820620:CDS 55.0%
AACGGGAATGCTAGCCCTGA+TGG + chr5_3:58103411-58103430 Msa0820620:CDS 55.0%
TGCCTCAAAGATTCCCCTGC+AGG + chr5_3:58103515-58103534 Msa0820620:CDS 55.0%
GGTGGTGTTCTTGGATGCAG+AGG + chr5_3:58103783-58103802 Msa0820620:CDS 55.0%
GATTGTTCATCCTGGGCCTG+TGG + chr5_3:58103951-58103970 Msa0820620:CDS 55.0%
CTAGGCAGAAGCCACAAGAG+CGG + chr5_3:58105170-58105189 Msa0820620:CDS 55.0%
AGAAGCCACAAGAGCGGATG+AGG + chr5_3:58105176-58105195 Msa0820620:CDS 55.0%
GAAGCCACAAGAGCGGATGA+GGG + chr5_3:58105177-58105196 Msa0820620:CDS 55.0%
AAGACCCTCATCCGCTCTTG+TGG - chr5_3:58105184-58105203 None:intergenic 55.0%
AGAGCGGATGAGGGTCTTGA+CGG + chr5_3:58105186-58105205 Msa0820620:CDS 55.0%
GAGCCCATGCTACGTAACTG+TGG + chr5_3:58105317-58105336 Msa0820620:CDS 55.0%
! GCTTCACACAAGTTGACGGG+AGG + chr5_3:58105357-58105376 Msa0820620:CDS 55.0%
! AGTTGACGGGAGGGTTTTGC+AGG + chr5_3:58105367-58105386 Msa0820620:CDS 55.0%
! GAGGGTTTTGCAGGCTCCTA+GGG + chr5_3:58105376-58105395 Msa0820620:CDS 55.0%
AGGAGAAACTTAGGAGCCCC+TGG - chr5_3:58106389-58106408 None:intergenic 55.0%
TACTGGTCGTTCACCCTGGT+AGG - chr5_3:58106595-58106614 None:intergenic 55.0%
CAGATACTGGTCGTTCACCC+TGG - chr5_3:58106599-58106618 None:intergenic 55.0%
GTTCTTCCAGCCTGGATCTC+CGG + chr5_3:58107881-58107900 Msa0820620:CDS 55.0%
CATTATCCGGAGATCCAGGC+TGG - chr5_3:58107890-58107909 None:intergenic 55.0%
GGCACATTATCCGGAGATCC+AGG - chr5_3:58107894-58107913 None:intergenic 55.0%
TCTCCGGATAATGTGCCTCC+TGG + chr5_3:58107897-58107916 Msa0820620:CDS 55.0%
!! TTCTGAAGCAGCAGCTCACC+AGG - chr5_3:58107918-58107937 None:intergenic 55.0%
TCATCTAGCCATGGTGGCAG+CGG + chr5_3:58108704-58108723 Msa0820620:CDS 55.0%
GGTGGATGACCTTTGCTGCA+AGG + chr5_3:58108890-58108909 Msa0820620:three_prime_UTR 55.0%
CGTGACACGTGCATGTCTGA+AGG - chr5_3:58108948-58108967 None:intergenic 55.0%
TCTGCTGGGACAATGGGAGG+TGG - chr5_3:58102829-58102848 None:intergenic 60.0%
CCCAGTCCACGTCTTGCCAT+TGG - chr5_3:58102910-58102929 None:intergenic 60.0%
!! AAGACGTGGACTGGGCTCGA+AGG + chr5_3:58102915-58102934 Msa0820620:CDS 60.0%
!! AGACGTGGACTGGGCTCGAA+GGG + chr5_3:58102916-58102935 Msa0820620:CDS 60.0%
GGCCTGCAGGGGAATCTTTG+AGG - chr5_3:58103520-58103539 None:intergenic 60.0%
GCATTAGCGATGGCCTGCAG+GGG - chr5_3:58103531-58103550 None:intergenic 60.0%
GGCATTAGCGATGGCCTGCA+GGG - chr5_3:58103532-58103551 None:intergenic 60.0%
AGGCATTAGCGATGGCCTGC+AGG - chr5_3:58103533-58103552 None:intergenic 60.0%
GAGGGCTGCATTCCAGCTTC+AGG + chr5_3:58103802-58103821 Msa0820620:CDS 60.0%
! GGAGGGTTTTGCAGGCTCCT+AGG + chr5_3:58105375-58105394 Msa0820620:CDS 60.0%
TCTGCCCGTTGTGATGTGCG+AGG + chr5_3:58106136-58106155 Msa0820620:CDS 60.0%
GAGGTGGTGCACGCCTAAAC+TGG - chr5_3:58106322-58106341 None:intergenic 60.0%
GTTTAGGCGTGCACCACCTC+TGG + chr5_3:58106322-58106341 Msa0820620:CDS 60.0%
TAGGGCATGCGTCCGAACTC+AGG + chr5_3:58107042-58107061 Msa0820620:CDS 60.0%
AGGGCATGCGTCCGAACTCA+GGG + chr5_3:58107043-58107062 Msa0820620:CDS 60.0%
! CGTCCGAACTCAGGGTGCTA+AGG + chr5_3:58107051-58107070 Msa0820620:CDS 60.0%
TGAAGCAGCAGCTCACCAGG+AGG - chr5_3:58107915-58107934 None:intergenic 60.0%
TATCACGACCGCTGCCACCA+TGG - chr5_3:58108715-58108734 None:intergenic 60.0%
TGGGACAATGGGAGGTGGCG+GGG - chr5_3:58102824-58102843 None:intergenic 65.0%
CTGGGACAATGGGAGGTGGC+GGG - chr5_3:58102825-58102844 None:intergenic 65.0%
GCTGGGACAATGGGAGGTGG+CGG - chr5_3:58102826-58102845 None:intergenic 65.0%
GGGCAACTGTGGGATGGGAG+AGG - chr5_3:58108744-58108763 None:intergenic 65.0%
! GGGACAATGGGAGGTGGCGG+GGG - chr5_3:58102823-58102842 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 58101508 58109133 58101508 ID=Msa0820620;Name=Msa0820620
chr5_3 mRNA 58101508 58109133 58101508 ID=Msa0820620-mRNA-1;Parent=Msa0820620;Name=Msa0820620-mRNA-1;_AED=0.14;_eAED=0.14;_QI=165|1|1|1|0.95|0.91|23|328|908
chr5_3 exon 58101508 58101669 58101508 ID=Msa0820620-mRNA-1:exon:17597;Parent=Msa0820620-mRNA-1
chr5_3 exon 58102787 58103014 58102787 ID=Msa0820620-mRNA-1:exon:17598;Parent=Msa0820620-mRNA-1
chr5_3 exon 58103117 58103322 58103117 ID=Msa0820620-mRNA-1:exon:17599;Parent=Msa0820620-mRNA-1
chr5_3 exon 58103407 58103631 58103407 ID=Msa0820620-mRNA-1:exon:17600;Parent=Msa0820620-mRNA-1
chr5_3 exon 58103719 58103855 58103719 ID=Msa0820620-mRNA-1:exon:17601;Parent=Msa0820620-mRNA-1
chr5_3 exon 58103935 58104032 58103935 ID=Msa0820620-mRNA-1:exon:17602;Parent=Msa0820620-mRNA-1
chr5_3 exon 58104156 58104253 58104156 ID=Msa0820620-mRNA-1:exon:17603;Parent=Msa0820620-mRNA-1
chr5_3 exon 58104373 58104538 58104373 ID=Msa0820620-mRNA-1:exon:17604;Parent=Msa0820620-mRNA-1
chr5_3 exon 58105094 58105210 58105094 ID=Msa0820620-mRNA-1:exon:17605;Parent=Msa0820620-mRNA-1
chr5_3 exon 58105290 58105397 58105290 ID=Msa0820620-mRNA-1:exon:17606;Parent=Msa0820620-mRNA-1
chr5_3 exon 58105935 58105997 58105935 ID=Msa0820620-mRNA-1:exon:17607;Parent=Msa0820620-mRNA-1
chr5_3 exon 58106088 58106201 58106088 ID=Msa0820620-mRNA-1:exon:17608;Parent=Msa0820620-mRNA-1
chr5_3 exon 58106281 58106446 58106281 ID=Msa0820620-mRNA-1:exon:17609;Parent=Msa0820620-mRNA-1
chr5_3 exon 58106536 58106648 58106536 ID=Msa0820620-mRNA-1:exon:17610;Parent=Msa0820620-mRNA-1
chr5_3 exon 58106751 58106888 58106751 ID=Msa0820620-mRNA-1:exon:17611;Parent=Msa0820620-mRNA-1
chr5_3 exon 58107004 58107134 58107004 ID=Msa0820620-mRNA-1:exon:17612;Parent=Msa0820620-mRNA-1
chr5_3 exon 58107427 58107492 58107427 ID=Msa0820620-mRNA-1:exon:17613;Parent=Msa0820620-mRNA-1
chr5_3 exon 58107667 58107730 58107667 ID=Msa0820620-mRNA-1:exon:17614;Parent=Msa0820620-mRNA-1
chr5_3 exon 58107807 58107918 58107807 ID=Msa0820620-mRNA-1:exon:17615;Parent=Msa0820620-mRNA-1
chr5_3 exon 58108013 58108086 58108013 ID=Msa0820620-mRNA-1:exon:17616;Parent=Msa0820620-mRNA-1
chr5_3 exon 58108309 58108403 58108309 ID=Msa0820620-mRNA-1:exon:17617;Parent=Msa0820620-mRNA-1
chr5_3 exon 58108514 58108545 58108514 ID=Msa0820620-mRNA-1:exon:17618;Parent=Msa0820620-mRNA-1
chr5_3 exon 58108627 58109133 58108627 ID=Msa0820620-mRNA-1:exon:17619;Parent=Msa0820620-mRNA-1
chr5_3 five_prime_UTR 58101508 58101669 58101508 ID=Msa0820620-mRNA-1:five_prime_utr;Parent=Msa0820620-mRNA-1
chr5_3 five_prime_UTR 58102787 58102789 58102787 ID=Msa0820620-mRNA-1:five_prime_utr;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58102790 58103014 58102790 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58103117 58103322 58103117 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58103407 58103631 58103407 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58103719 58103855 58103719 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58103935 58104032 58103935 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58104156 58104253 58104156 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58104373 58104538 58104373 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58105094 58105210 58105094 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58105290 58105397 58105290 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58105935 58105997 58105935 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58106088 58106201 58106088 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58106281 58106446 58106281 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58106536 58106648 58106536 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58106751 58106888 58106751 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58107004 58107134 58107004 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58107427 58107492 58107427 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58107667 58107730 58107667 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58107807 58107918 58107807 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58108013 58108086 58108013 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58108309 58108403 58108309 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58108514 58108545 58108514 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 CDS 58108627 58108805 58108627 ID=Msa0820620-mRNA-1:cds;Parent=Msa0820620-mRNA-1
chr5_3 three_prime_UTR 58108806 58109133 58108806 ID=Msa0820620-mRNA-1:three_prime_utr;Parent=Msa0820620-mRNA-1
Gene Sequence

>Msa0820620

ATGGGTTCTCAAGAGAATGAAGAATGTTTACCCCCGCCACCTCCCATTGTCCCAGCAGATCTTGAACCAATCAAGATTGAGCCGCACACAGTTAAGAAAAAGCTTCCCACCAAGGTTCCAATGGCAAGACGTGGACTGGGCTCGAAGGGAGCTAAACTGCCTCTGCTTACAAATCACTTCAAAGTGAATGTTACTAACACTGATGGTTATTTCTTCCAGTACAGTGTTGCTCTTTTTTATGAAGATGGACGCCCTGTTGAAGGAAAGGGTGCTGGCAGGAAGATACTTGACAGAGTTCAAGAAACTTATGGTTCTGAGCTTAATGGGAAAGACCTTGCGTATGATGGGGAGAAGACTCTGTTTACTATTGGCTCACTTGCTCAGAACAAGCTCGAGTTTACTGTTGTTCTTGAAGATGTCACTTCAAACAGGAACAACGGGAATGCTAGCCCTGATGGACATGGAAGTCCAAATGATACTGACAGGAAGAGGTTGAAAAAATCATACCGATCAAAGACCTACAAAGTTGAAATCAGCTTTGCCTCAAAGATTCCCCTGCAGGCCATCGCTAATGCCTTAAAAGGGCATGAAACTGAGAATTATCAAGAAGCGATTAGGGTTCTTGACATTATCTTGAGACAACATGCTGCTAAACAGGGCTGTCTGCTCGTTCGCCAGAATTTCTTCCACAATGATCCTAAGAATTTCACGGATGTAGGAGGTGGTGTTCTTGGATGCAGAGGGCTGCATTCCAGCTTCAGGACCACACAAAGTGGGCTGTCTTTGAATATAGACGTGTCAACAACCATGATTGTTCATCCTGGGCCTGTGGTTGATTTCTTGATTGCAAACCAGAATGTGAGAGATCCTTTCAGTCTTGACTGGAATAAGGCTAAAAGGACTCTAAAGAATTTGAGGATCACTACTAGCCCAACCAACCAAGAGTACAAAATTACTGGTTTAAGTGAAATGCCTTGCAAAGACCAGCTGTTCACTCTGAAGAAGAGAGGTGCTGTTCCCGGAGAAGATGATACAGAGGAGATCACTGTTTATGATTATTTTGTCAACCGCAGAAAAATTTCTCTGCAGTACTCAGCTGATCTGCCATGTATTAATGTTGGGAAGCCAAAGCGACCAACATTTGTCCCAGTTGAGCTTTGCTCATTGGTATCCCTTCAACGCTATACCAAAGCCCTGTCCACACTTCAAAGATCTTCCCTTGTGGAAAAGTCTAGGCAGAAGCCACAAGAGCGGATGAGGGTCTTGACGGATGCCTTAAAAACAAGTGACTATGGCTCTGAGCCCATGCTACGTAACTGTGGAATTTCAATAACATCTGGCTTCACACAAGTTGACGGGAGGGTTTTGCAGGCTCCTAGGTTGAAGTTTGGGAATGGCGAAGACTTCAATCCCAGAAATGGGAGATGGAACTTCAATAACAAGAAAATTGTGCAACCTGTTAAAATAGAGAAATGGGCTGTGGTGAACTTTTCTGCCCGTTGTGATGTGCGAGGACTTGTAAGGGATCTGATAAAATGTGGAGGAATGAAAGGAATTCAAGTTGAGCAGCCTTTTGATTGCTTTGAAGAAAACGGCCAGTTTAGGCGTGCACCACCTCTGGTCAGAGTTGAAAAAATGTTCGAACACGTTCAGTCTAAACTACCAGGGGCTCCTAAGTTTCTCCTTTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTTTATGGTCCATGGAAGAAAAAGAATCTTGCAGAGTTTGGAATTGTTACTCAGTGTATTGCTCCTACCAGGGTGAACGACCAGTATCTGACCAATGTTTTGCTGAAGATCAATGCAAAGCTTGGCGGCATGAATTCTCTTTTAGGTGTTGAACACTCTCCATCCATCCCTATTGTTTCAAAAGCTCCTACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGACAAACTGAAATTCCCTCGATTGCTGCGGTTGTAAGCTCAAGGCAATGGCCCTTGATATCTAAATATAGGGCATGCGTCCGAACTCAGGGTGCTAAGGTTGAAATGATTGACAATCTGTTCAAGCCAGTATCAGATAAGGAGGATGAAGGAATAATAAGGGAACTTTTGATTGATTTTTATAATAGTTCTGGGAACAGAAAACCAGACAATATCATAATTTTCAGGGATGGTGTCAGCGAGTCTCAGTTCAACCAAGTTTTGAACATTGAACTGAGCCAAATCATTGAGGCCTGCAAATTTCTTGATGAAAAGTGGAACCCCAAATTTATGGTGATTGTTGCCCAGAAGAATCATCACACAAAGTTCTTCCAGCCTGGATCTCCGGATAATGTGCCTCCTGGTACTGTTGTGGACAACAAAATCTGTCATCCCCGGAATTATGATTTCTACATGTGTGCTCATGCTGGAATGATTGGTACCAGTAGGCCAACTCATTATCATGTCCTTTTGGATGAGATTGGCTTTTCTCCAGATGATCTTCAAGAGCTTGTGCACTCTCTCTCATATGTGTATCAGAGGAGTACTACTGCTATCTCTGTTGTTGCTCCAATCTGCTATGCCCATTTGGCTGCTTCTCAAGTGGGACAGTTCATGAAGTTTGAAGACAAGTCTGAAACTTCATCTAGCCATGGTGGCAGCGGTCGTGATATCAATGCCTCTCCCATCCCACAGTTGCCCAAATTGATGGACAATGTCTGCAACTCCATGTTCTTTGTTTGA
Protein sequence

>Msa0820620

MGSQENEECLPPPPPIVPADLEPIKIEPHTVKKKLPTKVPMARRGLGSKGAKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDTDRKRLKKSYRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIQVEQPFDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDKEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFMVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDNVCNSMFFV*