AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580320 MtrunA17_Chr4g0039611 96.352 932 21 2 1 932 159 1077 0.0 1838
Msa0580320 MtrunA17_Chr5g0395621 88.437 934 92 4 1 932 159 1078 0.0 1686
Msa0580320 MtrunA17_Chr8g0340191 81.395 258 48 0 413 670 1 258 6.61e-149 440
Msa0580320 MtrunA17_Chr8g0340181 57.377 305 86 7 89 387 1 267 3.25e-95 301
Msa0580320 MtrunA17_Chr8g0340201 62.441 213 65 3 676 887 2 200 1.10e-75 246
Msa0580320 MtrunA17_Chr8g0340171 80.435 46 9 0 1 46 125 170 1.61e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580320 AT5G17020.1 83.601 933 136 4 1 932 159 1075 0.0 1598
Msa0580320 AT5G17020.2 81.994 933 136 5 1 932 159 1060 0.0 1558
Msa0580320 AT3G03110.1 80.150 932 171 3 1 932 159 1076 0.0 1521

Find 220 sgRNAs with CRISPR-Local

Find 641 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATAGTCCATTAACAAAT+TGG 0.194943 4_1:-85374596 None:intergenic
ACAAGTGTTGCATCTTCTTT+AGG 0.217241 4_1:+85372420 Msa0580320:CDS
TGATGTTCTTGTTCAATATA+AGG 0.232496 4_1:+85368535 Msa0580320:CDS
CTCATAGTTGAAGATGAAAA+TGG 0.234394 4_1:+85368482 Msa0580320:CDS
GAATATAACAACTTTGCTTT+TGG 0.253627 4_1:+85367454 Msa0580320:CDS
TGTTTACTATTGTAGCAAAA+AGG 0.257518 4_1:-85372950 None:intergenic
CAGGTGGCATCCCTTCAATT+TGG 0.261199 4_1:+85366801 Msa0580320:intron
AAAATAATATCCTCTCTATT+TGG 0.262760 4_1:-85375632 None:intergenic
GTATCAGGAAATCTCGTATA+TGG 0.269276 4_1:-85374650 None:intergenic
TAAATTGATCGAGACATTCT+TGG 0.269912 4_1:+85372812 Msa0580320:CDS
AGCAAGCAAAAGACCTGATT+TGG 0.273590 4_1:-85371695 None:intergenic
TATTCTCTTGAGTGGATTCC+AGG 0.283589 4_1:-85367436 None:intergenic
CAGGTTACCCAATTTGTTAA+TGG 0.289036 4_1:+85374588 Msa0580320:intron
TACCGAGTGCACTTACTATA+TGG 0.308552 4_1:+85375568 Msa0580320:three_prime_UTR
CAAAGAATGCTTTCTATTCC+AGG 0.320623 4_1:+85375070 Msa0580320:CDS
CTACTGGAATTCCTTGGTTT+CGG 0.321116 4_1:+85367626 Msa0580320:CDS
CGGAGTGATGATGACTCTTT+AGG 0.322684 4_1:+85375454 Msa0580320:three_prime_UTR
AGAGTTCTGTAATCAGTTCT+AGG 0.323991 4_1:+85374163 Msa0580320:CDS
CAAGTGTTGCATCTTCTTTA+GGG 0.333806 4_1:+85372421 Msa0580320:CDS
CACGTATCAGCTCAGCCCTT+TGG 0.340622 4_1:-85366488 None:intergenic
CAGGTATCGGCAATGCTTCC+TGG 0.341710 4_1:+85368347 Msa0580320:intron
GGAGATGCTGAAGAAGTTTC+AGG 0.344422 4_1:+85373906 Msa0580320:CDS
TGCGAACTTGATGGGACTTC+AGG 0.345750 4_1:+85367692 Msa0580320:CDS
AATAGGTCTGTTTGGACTAC+TGG 0.348346 4_1:+85367610 Msa0580320:intron
AGGTGGCATCCCTTCAATTT+GGG 0.357467 4_1:+85366802 Msa0580320:intron
GTTTGAGCCACATCGAAGTT+TGG 0.357770 4_1:+85367653 Msa0580320:CDS
TTGAAAATAATAGGTCTGTT+TGG 0.359269 4_1:+85367602 Msa0580320:intron
AATACACTCTGCTGGGCAAT+TGG 0.360947 4_1:+85369206 Msa0580320:CDS
ACGTATCAGCTCAGCCCTTT+GGG 0.361354 4_1:-85366487 None:intergenic
CATTGCATGCCTTCTTATCA+TGG 0.362756 4_1:+85366523 Msa0580320:CDS
GTGTGCTAACTGAGCCCCTT+TGG 0.363467 4_1:+85374390 Msa0580320:CDS
TTGACCTTTCAGCTGGAAAC+TGG 0.366423 4_1:+85374368 Msa0580320:intron
GACTGTGCTTAATATATTGC+AGG 0.367551 4_1:+85371899 Msa0580320:CDS
TCAGCAATTGAAGCTTGTTA+TGG 0.371534 4_1:+85373816 Msa0580320:CDS
ATTCAATCATGTGGGCATTT+CGG 0.372536 4_1:+85373839 Msa0580320:CDS
TATATTCATGGGCCAATTGC+AGG 0.373962 4_1:+85366860 Msa0580320:CDS
CAGAAATGGATGGAAATTAT+AGG 0.375812 4_1:+85371828 Msa0580320:intron
AGATTTCGATATGCTGGAAC+TGG 0.377398 4_1:-85366686 None:intergenic
TTCGATGCAGTTCGGTTAAG+AGG 0.380505 4_1:+85372781 Msa0580320:intron
ACCAATGATGGATCCTGTTC+TGG 0.380819 4_1:+85372878 Msa0580320:CDS
ACCTCAGCTGTTGTCATGTT+CGG 0.382138 4_1:-85374497 None:intergenic
GATTATTGATTTACTAATTG+AGG 0.382141 4_1:+85375363 Msa0580320:three_prime_UTR
TTCTTATCATGGATCCCCTT+GGG 0.383666 4_1:+85366534 Msa0580320:CDS
GCTCAACATTATATTAGTTC+AGG 0.386914 4_1:+85365001 Msa0580320:five_prime_UTR
ATAAAGCTTCGCCATCTTGC+TGG 0.392745 4_1:-85365194 None:intergenic
GAGGGAGACTCTTATTTACT+TGG 0.392816 4_1:+85368732 Msa0580320:CDS
TGAGACACATCCTGGAGTTC+AGG 0.393009 4_1:+85370252 Msa0580320:CDS
TCAACTATGAGAACCTCTTC+GGG 0.394916 4_1:-85368470 None:intergenic
GAAAGGAATATTGCTGAAAC+AGG 0.395957 4_1:+85373868 Msa0580320:CDS
CTAGAGATTTGAAGCTAGAA+AGG 0.397708 4_1:-85375671 None:intergenic
ACAATTTGTGCCACCAATGA+TGG 0.397908 4_1:+85372866 Msa0580320:CDS
CAAGATGTATGGTATATTCA+TGG 0.397963 4_1:+85366848 Msa0580320:CDS
AAGAACATCATTGTCCTTCA+AGG 0.398870 4_1:-85368522 None:intergenic
CAGTACCTGCTCTTCTATCA+TGG 0.400683 4_1:-85369243 None:intergenic
TTCAACTATGAGAACCTCTT+CGG 0.400992 4_1:-85368471 None:intergenic
TTTGTATCTGAACTTCTATC+AGG 0.404322 4_1:+85371432 Msa0580320:CDS
TGCACAAACCGCCAGAAGTT+AGG 0.404664 4_1:-85375482 None:intergenic
AAGAACTTAAGCCGGTGCTC+AGG 0.405513 4_1:-85373598 None:intergenic
TGTGCTAACTGAGCCCCTTT+GGG 0.407002 4_1:+85374391 Msa0580320:CDS
TGTTTACTTGACAGATTATG+AGG 0.407197 4_1:+85368713 Msa0580320:intron
ATGCTTCCTGGTATGGTTGA+TGG 0.407442 4_1:+85368359 Msa0580320:CDS
TGGGCAATTGGATCTATATC+TGG 0.409569 4_1:+85369218 Msa0580320:CDS
TCCTCTCTATTTGGAGGGAT+GGG 0.415414 4_1:-85375623 None:intergenic
CTTCTTATCATGGATCCCCT+TGG 0.418863 4_1:+85366533 Msa0580320:CDS
TGCAGCTTCTGCGAACTTGA+TGG 0.419691 4_1:+85367683 Msa0580320:CDS
GATCCAAACACACCTGCAAT+TGG 0.423360 4_1:-85366872 None:intergenic
TTAGCCGCTGCGACAAGATC+AGG 0.425401 4_1:-85365218 None:intergenic
TGAAGGATCAAGATGTAATA+CGG 0.426213 4_1:+85371877 Msa0580320:CDS
TTGCCATGTGCATATGCCTC+GGG 0.433269 4_1:-85367026 None:intergenic
GAGTGTATTCAAATTGTTCC+AGG 0.433903 4_1:-85369192 None:intergenic
ACTGATCTGTTTGTCAAGCC+AGG 0.438397 4_1:+85373660 Msa0580320:CDS
TGAATTTCTTCAGCGGTTGA+TGG 0.438441 4_1:+85371667 Msa0580320:CDS
TTTAGGTGTGACCTAACTTC+TGG 0.441541 4_1:+85375471 Msa0580320:three_prime_UTR
TTTGGACTACTGGAATTCCT+TGG 0.443399 4_1:+85367620 Msa0580320:CDS
GTTGATGGAGCTCCCAAATC+AGG 0.445324 4_1:+85371682 Msa0580320:CDS
AAATAGTCCATTAACAAATT+GGG 0.445619 4_1:-85374595 None:intergenic
TCAAGATCTGCAATAGTGAT+TGG 0.450448 4_1:-85371459 None:intergenic
AGCTTAAACAATCATTGAAC+AGG 0.451004 4_1:+85365416 Msa0580320:CDS
TACTAATTGAGGATTATGTT+GGG 0.451908 4_1:+85375374 Msa0580320:three_prime_UTR
ATCCTCTCTATTTGGAGGGA+TGG 0.452697 4_1:-85375624 None:intergenic
ATCGGCAATGCTTCCTGGTA+TGG 0.453160 4_1:+85368352 Msa0580320:CDS
AGATGAAATGGTGGACTCAT+AGG 0.454147 4_1:+85375117 Msa0580320:CDS
GATCGAGACATTCTTGGATA+AGG 0.455063 4_1:+85372818 Msa0580320:CDS
GCATCTCCAACAACAGGTTC+AGG 0.456467 4_1:-85373891 None:intergenic
ACAATTTGAATACACTCTGC+TGG 0.457803 4_1:+85369198 Msa0580320:CDS
CTAGCATAATCTCCCAGAAC+AGG 0.458405 4_1:-85372891 None:intergenic
CTGGGTTCAAATTACATGTC+TGG 0.459980 4_1:+85374247 Msa0580320:CDS
ACCTCAGATTCCCTTGCATC+AGG 0.459982 4_1:-85372921 None:intergenic
TTTCATCTTGCAACTCGATA+GGG 0.460559 4_1:-85375102 None:intergenic
TGCTTCCTGGTATGGTTGAT+GGG 0.462235 4_1:+85368360 Msa0580320:CDS
TCTTCAGCATCTCCAACAAC+AGG 0.463831 4_1:-85373897 None:intergenic
TCGATAGGGGCAATCAGCCC+TGG 0.464759 4_1:-85375088 None:intergenic
ATTTGTGTTAGGCGGCAGTA+TGG 0.464788 4_1:-85367000 None:intergenic
TATCGAGTTGCAAGATGAAA+TGG 0.464848 4_1:+85375105 Msa0580320:CDS
TTACTAATTGAGGATTATGT+TGG 0.467235 4_1:+85375373 Msa0580320:three_prime_UTR
TTTATGCATGAGACACATCC+TGG 0.470454 4_1:+85370244 Msa0580320:CDS
AACAGGCCTGAACCTGTTGT+TGG 0.470757 4_1:+85373885 Msa0580320:CDS
CCAATGATGGATCCTGTTCT+GGG 0.470966 4_1:+85372879 Msa0580320:CDS
CCCAGAACAGGATCCATCAT+TGG 0.482264 4_1:-85372879 None:intergenic
CAACCTTTCCGTTCGAAATG+AGG 0.482971 4_1:-85364967 None:intergenic
GCTGAAGATCAACCACAGAT+TGG 0.484039 4_1:+85372840 Msa0580320:CDS
ATTTCATCTTGCAACTCGAT+AGG 0.485254 4_1:-85375103 None:intergenic
GCAAGCAAAAGACCTGATTT+GGG 0.487434 4_1:-85371694 None:intergenic
CATTGTCCTTCAAGGTTTCA+CGG 0.489746 4_1:-85368514 None:intergenic
GCAGGTTCACATCCGCATCC+TGG 0.490283 4_1:+85367418 Msa0580320:intron
GCCTCGGGGATATTTGTGTT+AGG 0.490648 4_1:-85367011 None:intergenic
AAGGCATACAGATTCGTAGA+AGG 0.492583 4_1:-85371499 None:intergenic
ATAATATCCTCTCTATTTGG+AGG 0.496349 4_1:-85375629 None:intergenic
GCAGCTTCTGCGAACTTGAT+GGG 0.497457 4_1:+85367684 Msa0580320:CDS
AGCGTAAGATTTCGATATGC+TGG 0.500147 4_1:-85366692 None:intergenic
CATCTTATGTGAAACTTCTA+CGG 0.502876 4_1:+85372688 Msa0580320:CDS
TCGCTTGATAGGTATGTTGT+TGG 0.504977 4_1:+85370154 Msa0580320:intron
TCATAGTTGAAGATGAAAAT+GGG 0.505293 4_1:+85368483 Msa0580320:CDS
TATCAGGAAATCTCGTATAT+GGG 0.506963 4_1:-85374649 None:intergenic
AACAACTCAGTGGTGAGGAT+TGG 0.507258 4_1:+85369168 Msa0580320:CDS
AAATGCTGATAAGATATTCA+AGG 0.507542 4_1:-85367478 None:intergenic
CAACGTCGTCAGCTTTATGC+TGG 0.507554 4_1:+85368401 Msa0580320:CDS
AGATCATTGTGATTTGAGGC+AGG 0.510406 4_1:-85372452 None:intergenic
AGTTGTTATATTCTCTTGAG+TGG 0.513869 4_1:-85367444 None:intergenic
CCTGGTATGGTTGATGGGCA+CGG 0.514902 4_1:+85368365 Msa0580320:CDS
CCATGATGATACTGAAAAGC+AGG 0.516021 4_1:+85368765 Msa0580320:CDS
TGGACATGTTGAATGTGTAC+AGG 0.517694 4_1:+85372478 Msa0580320:CDS
ATGAGGTGAAGAACAGCGCC+AGG 0.521707 4_1:-85367160 None:intergenic
ATCAAGTTCGCAGAAGCTGC+AGG 0.523514 4_1:-85367681 None:intergenic
TGTGCTATCGGCATCCCAAA+GGG 0.529449 4_1:+85366473 Msa0580320:CDS
CAAAGATCTCTATGCTGAAG+AGG 0.531854 4_1:+85375021 Msa0580320:CDS
TATTGTCCGTGAAACCTTGA+AGG 0.534873 4_1:+85368508 Msa0580320:CDS
TGGTTCCATGATAGAAGAGC+AGG 0.535654 4_1:+85369238 Msa0580320:CDS
CAAGGGGATCCATGATAAGA+AGG 0.538201 4_1:-85366532 None:intergenic
GAAGAGAGAAGAACTTAAGC+CGG 0.538221 4_1:-85373606 None:intergenic
ACTTGTAGCAACATCCCAAA+GGG 0.539515 4_1:-85374405 None:intergenic
GATAGAAGTTCAGATACAAA+TGG 0.542603 4_1:-85371429 None:intergenic
GACTTGTAGCAACATCCCAA+AGG 0.543415 4_1:-85374406 None:intergenic
TTAGGCATTTATACAGAACC+TGG 0.546070 4_1:+85367142 Msa0580320:intron
AGCATTCTCAACTTTGACAT+GGG 0.546626 4_1:-85368425 None:intergenic
GGGCATTTCGGCACACAGAA+AGG 0.547271 4_1:+85373851 Msa0580320:CDS
CAATTTGAATACACTCTGCT+GGG 0.548023 4_1:+85369199 Msa0580320:CDS
CCGTGCCCATCAACCATACC+AGG 0.548181 4_1:-85368365 None:intergenic
ATGGATGGAAATTATAGGCC+AGG 0.548256 4_1:+85371833 Msa0580320:CDS
CTAGGAATGCTCCTGATGCA+AGG 0.552257 4_1:+85372910 Msa0580320:CDS
GCGCTATAGCGGCGAATATG+CGG 0.552868 4_1:+85375721 Msa0580320:three_prime_UTR
AAGATGTATGGTATATTCAT+GGG 0.555548 4_1:+85366849 Msa0580320:CDS
TCGATGCAGTTCGGTTAAGA+GGG 0.559242 4_1:+85372782 Msa0580320:intron
TTGAAGATTACCCTGAGCAC+CGG 0.559648 4_1:+85373587 Msa0580320:CDS
GTGCAATATGTCAAGATGTA+TGG 0.559915 4_1:+85366837 Msa0580320:CDS
CTGTTCTGGGAGATTATGCT+AGG 0.561609 4_1:+85372892 Msa0580320:CDS
CTTGACAAACAGATCAGTGC+AGG 0.563746 4_1:-85373655 None:intergenic
CCCAGGCTTATGAAAAGTAT+CGG 0.564406 4_1:-85374229 None:intergenic
AGGAAAACAATGAGTAGCTA+TGG 0.566018 4_1:-85373635 None:intergenic
GATCTGCAATAGTGATTGGA+AGG 0.567155 4_1:-85371455 None:intergenic
TTCATCTTGCAACTCGATAG+GGG 0.569366 4_1:-85375101 None:intergenic
AAAGAATGCTTTCTATTCCA+GGG 0.571488 4_1:+85375071 Msa0580320:CDS
CTTGAGTGGATTCCAGGATG+CGG 0.572251 4_1:-85367430 None:intergenic
TTATATATTTGAATCACCGT+TGG 0.573963 4_1:+85366557 Msa0580320:CDS
GTTATGCTTATATGTGCTAT+CGG 0.574920 4_1:+85366461 Msa0580320:CDS
CCTCTCTATTTGGAGGGATG+GGG 0.576459 4_1:-85375622 None:intergenic
AGAACTTAAGCCGGTGCTCA+GGG 0.577552 4_1:-85373597 None:intergenic
AGCATGAGTGGCCAGCAAGA+TGG 0.577675 4_1:+85365183 Msa0580320:five_prime_UTR
GTAGAAGGAGTGTATCTGAT+GGG 0.578468 4_1:-85371484 None:intergenic
ATTGCCATGTGCATATGCCT+CGG 0.578592 4_1:-85367027 None:intergenic
CTCAAACAGCTCCGAAACCA+AGG 0.580287 4_1:-85367637 None:intergenic
TCTCTATGCTGAAGAGGCTG+CGG 0.580599 4_1:+85375027 Msa0580320:CDS
TCCTGATGCAAGGGAATCTG+AGG 0.583164 4_1:+85372920 Msa0580320:CDS
TTGTTATGGATTCAATCATG+TGG 0.583890 4_1:+85373830 Msa0580320:CDS
ATGTGCTATCGGCATCCCAA+AGG 0.587524 4_1:+85366472 Msa0580320:CDS
CGTAGAAGGAGTGTATCTGA+TGG 0.588720 4_1:-85371485 None:intergenic
TGATTCAAATATATAACCCA+AGG 0.590786 4_1:-85366550 None:intergenic
CGTGTAATCTGCAGATGCTG+AGG 0.591084 4_1:+85369135 Msa0580320:intron
TAATATCCTCTCTATTTGGA+GGG 0.596427 4_1:-85375628 None:intergenic
AAGCATTCTCAACTTTGACA+TGG 0.596752 4_1:-85368426 None:intergenic
GTACAATAGCGGCGCTATAG+CGG 0.598772 4_1:+85375710 Msa0580320:three_prime_UTR
AGGCCTCATTTCGAACGGAA+AGG 0.600634 4_1:+85364964 Msa0580320:five_prime_UTR
CATGGACAAGTCTATATCCC+CGG 0.607418 4_1:-85375329 None:intergenic
TAGGAATGCTCCTGATGCAA+GGG 0.607736 4_1:+85372911 Msa0580320:CDS
TGTTATGGATTCAATCATGT+GGG 0.609757 4_1:+85373831 Msa0580320:CDS
GTTTACTTGACAGATTATGA+GGG 0.612625 4_1:+85368714 Msa0580320:intron
TCGGGGATATTTGTGTTAGG+CGG 0.615711 4_1:-85367008 None:intergenic
CGGCTCAGAGAGAAAGAGAA+CGG 0.616816 4_1:+85375047 Msa0580320:CDS
GATTCAAATATATAACCCAA+GGG 0.617377 4_1:-85366549 None:intergenic
GGCATGCAATGTAGATAGTG+TGG 0.618242 4_1:-85366511 None:intergenic
AAGAGTCATCATCACTCCGA+AGG 0.619001 4_1:-85375450 None:intergenic
GATTTCGATATGCTGGAACT+GGG 0.620969 4_1:-85366685 None:intergenic
ATCCCCGAGGCATATGCACA+TGG 0.622830 4_1:+85367023 Msa0580320:CDS
AATCTATGTGAAATCACGAA+GGG 0.623585 4_1:+85370021 Msa0580320:CDS
CCCCATCCCTCCAAATAGAG+AGG 0.629051 4_1:+85375622 Msa0580320:three_prime_UTR
AATAATCTACACTCACCACA+TGG 0.630833 4_1:-85375347 None:intergenic
AACAATGAGTAGCTATGGCG+CGG 0.631317 4_1:-85373630 None:intergenic
GTTTGTGCAGAAAACCCTTG+TGG 0.633463 4_1:+85375496 Msa0580320:three_prime_UTR
AGAGAGATGAATTTCTTCAG+CGG 0.635384 4_1:+85371660 Msa0580320:CDS
AGGTGTGACCTAACTTCTGG+CGG 0.636299 4_1:+85375474 Msa0580320:three_prime_UTR
AATGCTTATGATCTGTCGAA+TGG 0.640679 4_1:+85368442 Msa0580320:CDS
AAGTAAACAACTCAGTGGTG+AGG 0.642832 4_1:+85369163 Msa0580320:CDS
CAACGAGGCCTCATTTCGAA+CGG 0.643519 4_1:+85364959 Msa0580320:five_prime_UTR
TATTCCTGATCTTGTCGCAG+CGG 0.643593 4_1:+85365214 Msa0580320:five_prime_UTR
AGAACAGGATCCATCATTGG+TGG 0.644463 4_1:-85372876 None:intergenic
TCCGAACATGACAACAGCTG+AGG 0.645401 4_1:+85374496 Msa0580320:CDS
TCGAATGGCTAAACCCGAAG+AGG 0.647046 4_1:+85368457 Msa0580320:CDS
TTTCTATCATAGTACAATAG+CGG 0.648494 4_1:+85375699 Msa0580320:three_prime_UTR
GCATTACTTGGGTATGACTG+TGG 0.648596 4_1:-85374428 None:intergenic
AACCATATAGTAAGTGCACT+CGG 0.649108 4_1:-85375570 None:intergenic
CAGACATGTAATTTGAACCC+AGG 0.650344 4_1:-85374246 None:intergenic
TCAGTGGTGAGGATTGGACC+TGG 0.651890 4_1:+85369174 Msa0580320:CDS
AAATCTATGTGAAATCACGA+AGG 0.654119 4_1:+85370020 Msa0580320:CDS
CGAGTTGCAAGATGAAATGG+TGG 0.657463 4_1:+85375108 Msa0580320:CDS
TAGAAGGAGTGTATCTGATG+GGG 0.661038 4_1:-85371483 None:intergenic
TACGCTGCAATGTTTAACAG+AGG 0.663731 4_1:+85366709 Msa0580320:CDS
TGCATAGCTTTCTAGCAACG+AGG 0.670460 4_1:+85364944 Msa0580320:five_prime_UTR
TGCCATGTGCATATGCCTCG+GGG 0.678438 4_1:-85367025 None:intergenic
AACGATCTGTGAGAATTGCA+TGG 0.684162 4_1:+85365250 Msa0580320:exon
ATACAAAATATAAAACCACA+AGG 0.688621 4_1:-85375511 None:intergenic
GCGTAAGTTTGTGATCACCC+AGG 0.698935 4_1:+85371304 Msa0580320:CDS
GGATTATCCAAACTTCGATG+TGG 0.699508 4_1:-85367660 None:intergenic
ATTCAAATATATAACCCAAG+GGG 0.700367 4_1:-85366548 None:intergenic
AAAACGGCTTCAAATATGCG+AGG 0.702127 4_1:-85373165 None:intergenic
GGGATATAGACTTGTCCATG+TGG 0.705442 4_1:+85375332 Msa0580320:three_prime_UTR
TACAAAATATAAAACCACAA+GGG 0.707514 4_1:-85375510 None:intergenic
AAATTAAGTAAACAACTCAG+TGG 0.731890 4_1:+85369158 Msa0580320:CDS
CTTGTAGCAACATCCCAAAG+GGG 0.739875 4_1:-85374404 None:intergenic
GCCTAACACAAATATCCCCG+AGG 0.742982 4_1:+85367010 Msa0580320:CDS
ATAGCGGCGAATATGCGGTG+CGG 0.768811 4_1:+85375726 Msa0580320:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACGTAAAAAAATAATTTT+TGG + chr4_1:85365806-85365825 Msa0580320:intron 10.0%
!!! TTTTAGAACAATTAATTAAT+TGG + chr4_1:85368195-85368214 Msa0580320:intron 10.0%
!!! TAATATTACATTACATTTTT+AGG - chr4_1:85369023-85369042 None:intergenic 10.0%
!!! TAATTTTTAATTCTTTTTTC+TGG + chr4_1:85371040-85371059 Msa0580320:intron 10.0%
!!! AAATTTCATTTAATGTTTTA+TGG + chr4_1:85371984-85372003 Msa0580320:intron 10.0%
!! TGAACATAAAAAATAAAAAA+AGG - chr4_1:85372991-85373010 None:intergenic 10.0%
!! AAACATAATCTAATGAAAAA+GGG - chr4_1:85365298-85365317 None:intergenic 15.0%
!! TAAATGGTAAAATTTAACAA+CGG - chr4_1:85366068-85366087 None:intergenic 15.0%
!!! ATCAGTTTTAAATTTATTGT+TGG + chr4_1:85368857-85368876 Msa0580320:intron 15.0%
!!! TCAGTTTTAAATTTATTGTT+GGG + chr4_1:85368858-85368877 Msa0580320:intron 15.0%
!! GTTCAAAAAAAAATTATTGT+CGG + chr4_1:85368887-85368906 Msa0580320:intron 15.0%
!! TTCAAAAAAAAATTATTGTC+GGG + chr4_1:85368888-85368907 Msa0580320:intron 15.0%
!! ATATCAACTTTCTTTAAATA+TGG + chr4_1:85368968-85368987 Msa0580320:intron 15.0%
!!! AGATTTGTTATTGTAAATTT+TGG + chr4_1:85369628-85369647 Msa0580320:intron 15.0%
!! ATGATAAATAATATCATTAG+AGG - chr4_1:85370321-85370340 None:intergenic 15.0%
!!! ATTAATACTACAAATTTTCT+TGG + chr4_1:85370723-85370742 Msa0580320:intron 15.0%
!! TGTGTATAACTATTATTAAA+GGG - chr4_1:85370917-85370936 None:intergenic 15.0%
!! TTGTGTATAACTATTATTAA+AGG - chr4_1:85370918-85370937 None:intergenic 15.0%
!!! TATTTTTATATGAATTCAAG+AGG - chr4_1:85371363-85371382 None:intergenic 15.0%
!! ATGAAATTTCAAAATTCAAA+TGG - chr4_1:85371973-85371992 None:intergenic 15.0%
!!! ATTTCTAAAAGTATTTTAGA+AGG + chr4_1:85372645-85372664 Msa0580320:CDS 15.0%
!!! TTTCTAAAAGTATTTTAGAA+GGG + chr4_1:85372646-85372665 Msa0580320:CDS 15.0%
!! TCGAAAAGAATAAATAAAAA+GGG - chr4_1:85372766-85372785 None:intergenic 15.0%
!! ATCGAAAAGAATAAATAAAA+AGG - chr4_1:85372767-85372786 None:intergenic 15.0%
!! AACTAAATATTCAAATCAAA+GGG - chr4_1:85373314-85373333 None:intergenic 15.0%
!! AAACTAAATATTCAAATCAA+AGG - chr4_1:85373315-85373334 None:intergenic 15.0%
!! ATATATAAAATGATATATGC+AGG - chr4_1:85374111-85374130 None:intergenic 15.0%
!! ATTTATATTTCAATATGTAC+TGG - chr4_1:85374808-85374827 None:intergenic 15.0%
!!! TTTTTCTTCAATTGATTTTT+AGG + chr4_1:85375535-85375554 Msa0580320:three_prime_UTR 15.0%
!!! TTTTCTTCAATTGATTTTTA+GGG + chr4_1:85375536-85375555 Msa0580320:three_prime_UTR 15.0%
!! AACATAATCTAATGAAAAAG+GGG - chr4_1:85365297-85365316 None:intergenic 20.0%
!! GAAACATAATCTAATGAAAA+AGG - chr4_1:85365299-85365318 None:intergenic 20.0%
!!! ACATTTTTTAAGTCAATCAT+TGG - chr4_1:85365327-85365346 None:intergenic 20.0%
!! TAGGAATTATCACTAAAAAA+TGG + chr4_1:85365861-85365880 Msa0580320:intron 20.0%
!! AGTAAATTATCAGAACTTAA+AGG - chr4_1:85366745-85366764 None:intergenic 20.0%
!! ATAAAAATTCCCAAATTGAA+GGG - chr4_1:85366814-85366833 None:intergenic 20.0%
!! AAATCTAACCTTAAAAAATG+AGG - chr4_1:85367180-85367199 None:intergenic 20.0%
!!! AATATAACAACTTTGCTTTT+GGG + chr4_1:85367455-85367474 Msa0580320:CDS 20.0%
!! TGAATGTTAAAATCAAGAAT+TGG + chr4_1:85367742-85367761 Msa0580320:intron 20.0%
!! TTGGATTAAGAATTAATACT+TGG + chr4_1:85367903-85367922 Msa0580320:intron 20.0%
!! GCACTTAATAAATTTGAAAA+TGG - chr4_1:85368121-85368140 None:intergenic 20.0%
!! TTTCAAATTTATTAAGTGCA+TGG + chr4_1:85368122-85368141 Msa0580320:intron 20.0%
!!! TCTTTTCTTATTTCTAACAA+AGG + chr4_1:85368279-85368298 Msa0580320:intron 20.0%
!! TAAAAGTAGAATATGCAAAA+GGG - chr4_1:85368640-85368659 None:intergenic 20.0%
!! ATAAAAGTAGAATATGCAAA+AGG - chr4_1:85368641-85368660 None:intergenic 20.0%
!!! TTTAAAGAAAGTTGATATTG+TGG - chr4_1:85368966-85368985 None:intergenic 20.0%
!!! AAAGATTGATTCTGTTATTA+TGG - chr4_1:85369488-85369507 None:intergenic 20.0%
!! TACTAAAACTGATAAAACAA+TGG - chr4_1:85369918-85369937 None:intergenic 20.0%
!! GGTTAATCATATTCAAATTA+TGG - chr4_1:85370408-85370427 None:intergenic 20.0%
!!! TTTTGACTTGTTATTCATTA+CGG + chr4_1:85370432-85370451 Msa0580320:intron 20.0%
!! TCTTGTCAAAATTTCTATAT+AGG - chr4_1:85370493-85370512 None:intergenic 20.0%
!!! TAGAGACAATTTTTTTCAAT+AGG - chr4_1:85370643-85370662 None:intergenic 20.0%
!! TAATATTTGTGAAATATGCA+AGG + chr4_1:85370972-85370991 Msa0580320:intron 20.0%
!! TTACAAGGTAAATATAGATT+AGG - chr4_1:85371132-85371151 None:intergenic 20.0%
!! TAACTTACAAGAACAAATAT+AGG - chr4_1:85371585-85371604 None:intergenic 20.0%
!! GTTATATTGTTGAAAATTGT+AGG + chr4_1:85371601-85371620 Msa0580320:intron 20.0%
!! CAGACATTAATTATAATACT+TGG - chr4_1:85371786-85371805 None:intergenic 20.0%
!!! TCAAAATGTTGATTTTTTGA+AGG + chr4_1:85371860-85371879 Msa0580320:CDS 20.0%
!!! TCATTTTTTATGTAATTTCG+TGG + chr4_1:85371930-85371949 Msa0580320:intron 20.0%
!! ATGTTTGAACAATTAACAAT+GGG - chr4_1:85372227-85372246 None:intergenic 20.0%
!! TTAATTGTTCAAACATCTAA+GGG + chr4_1:85372231-85372250 Msa0580320:intron 20.0%
!!! TTCTAAAAGTATTTTAGAAG+GGG + chr4_1:85372647-85372666 Msa0580320:CDS 20.0%
!! TTTATGTTCATTTATTTCCT+TGG + chr4_1:85373001-85373020 Msa0580320:intron 20.0%
!!! AAAATAATATCAGTCTTGTA+TGG + chr4_1:85373338-85373357 Msa0580320:intron 20.0%
!!! ACTTGATGACAAATAATTAT+TGG + chr4_1:85373491-85373510 Msa0580320:intron 20.0%
!!! CTTGATGACAAATAATTATT+GGG + chr4_1:85373492-85373511 Msa0580320:intron 20.0%
!! AAATAGTCCATTAACAAATT+GGG - chr4_1:85374598-85374617 None:intergenic 20.0%
!! ATACAATCAAACAATTTACA+AGG - chr4_1:85374908-85374927 None:intergenic 20.0%
!!! TCTTCCCAATATTTTATATT+GGG + chr4_1:85375264-85375283 Msa0580320:intron 20.0%
!!! GATTATTGATTTACTAATTG+AGG + chr4_1:85375363-85375382 Msa0580320:three_prime_UTR 20.0%
!!! ATTTTTGTTCAATACAAAGA+TGG - chr4_1:85375422-85375441 None:intergenic 20.0%
!! ATCTTTGTATTGAACAAAAA+TGG + chr4_1:85375421-85375440 Msa0580320:three_prime_UTR 20.0%
!! TACAAAATATAAAACCACAA+GGG - chr4_1:85375513-85375532 None:intergenic 20.0%
!! ATACAAAATATAAAACCACA+AGG - chr4_1:85375514-85375533 None:intergenic 20.0%
!!! TTTCTTCAATTGATTTTTAG+GGG + chr4_1:85375537-85375556 Msa0580320:three_prime_UTR 20.0%
!! AAAATAATATCCTCTCTATT+TGG - chr4_1:85375635-85375654 None:intergenic 20.0%
! AAAGTAATGTTAAGAAACTG+CGG - chr4_1:85365033-85365052 None:intergenic 25.0%
! ATCATTGAACTATAAGTTTC+AGG - chr4_1:85365083-85365102 None:intergenic 25.0%
!! ACTGAACTTGTTTATAGAAA+AGG - chr4_1:85365121-85365140 None:intergenic 25.0%
! AAGGTATAAAAGATCTTAAG+AGG - chr4_1:85365144-85365163 None:intergenic 25.0%
! TCAAAATCTGCTTATAGAAA+AGG - chr4_1:85365163-85365182 None:intergenic 25.0%
! TAACTAAAACTCAATCTTTC+AGG - chr4_1:85365476-85365495 None:intergenic 25.0%
!!! TGTACAGTAATGGATTTATA+AGG + chr4_1:85365501-85365520 Msa0580320:intron 25.0%
!!! TGTGATGGTCTATAATTTTT+TGG + chr4_1:85365546-85365565 Msa0580320:intron 25.0%
!!! GTGATGGTCTATAATTTTTT+GGG + chr4_1:85365547-85365566 Msa0580320:intron 25.0%
! GTTGGAAAATATATTGTAGT+TGG + chr4_1:85365672-85365691 Msa0580320:intron 25.0%
!! TATTGTAGTTGGTATTAGTA+TGG + chr4_1:85365683-85365702 Msa0580320:intron 25.0%
!! CAAATACTCTTATTGATGAT+CGG + chr4_1:85365767-85365786 Msa0580320:intron 25.0%
!! GGAAAATCATTTTCTAATCT+AGG + chr4_1:85365842-85365861 Msa0580320:intron 25.0%
! ATGTAATCTGAATTCTTGTA+AGG + chr4_1:85366222-85366241 Msa0580320:intron 25.0%
! ATTCAAATATATAACCCAAG+GGG - chr4_1:85366551-85366570 None:intergenic 25.0%
! GATTCAAATATATAACCCAA+GGG - chr4_1:85366552-85366571 None:intergenic 25.0%
! TGATTCAAATATATAACCCA+AGG - chr4_1:85366553-85366572 None:intergenic 25.0%
! TTATATATTTGAATCACCGT+TGG + chr4_1:85366557-85366576 Msa0580320:CDS 25.0%
! AATTATCAGAACTTAAAGGA+TGG - chr4_1:85366741-85366760 None:intergenic 25.0%
!!! TATTCACTTTTTATGTTTGC+AGG + chr4_1:85366782-85366801 Msa0580320:intron 25.0%
! CATAAAAATTCCCAAATTGA+AGG - chr4_1:85366815-85366834 None:intergenic 25.0%
! AAGATGTATGGTATATTCAT+GGG + chr4_1:85366849-85366868 Msa0580320:CDS 25.0%
!! AAGTAAGTTTTTACTGAAAC+AGG + chr4_1:85367060-85367079 Msa0580320:intron 25.0%
! AATATTAGATCCTGCATTAT+TGG + chr4_1:85367332-85367351 Msa0580320:intron 25.0%
! ATATTAGATCCTGCATTATT+GGG + chr4_1:85367333-85367352 Msa0580320:intron 25.0%
!! GAATATAACAACTTTGCTTT+TGG + chr4_1:85367454-85367473 Msa0580320:CDS 25.0%
! AAATGCTGATAAGATATTCA+AGG - chr4_1:85367481-85367500 None:intergenic 25.0%
!!! TCTGGTTTGTTGAAAATAAT+AGG + chr4_1:85367593-85367612 Msa0580320:intron 25.0%
! TTGAAAATAATAGGTCTGTT+TGG + chr4_1:85367602-85367621 Msa0580320:intron 25.0%
!!! TGAGACAAATGTTTTAATAG+GGG - chr4_1:85367780-85367799 None:intergenic 25.0%
!!! GTGAGACAAATGTTTTAATA+GGG - chr4_1:85367781-85367800 None:intergenic 25.0%
!!! TGTGAGACAAATGTTTTAAT+AGG - chr4_1:85367782-85367801 None:intergenic 25.0%
! TCTGTTTAGCATGTTATTAT+TGG + chr4_1:85367884-85367903 Msa0580320:intron 25.0%
! AAAAAACAAAGATCAAGTCA+AGG - chr4_1:85368026-85368045 None:intergenic 25.0%
!!! TGACTTGATCTTTGTTTTTT+TGG + chr4_1:85368026-85368045 Msa0580320:intron 25.0%
!!! TTTCTTATTTCTAACAAAGG+TGG + chr4_1:85368282-85368301 Msa0580320:intron 25.0%
! TCATAGTTGAAGATGAAAAT+GGG + chr4_1:85368483-85368502 Msa0580320:CDS 25.0%
! TGATGTTCTTGTTCAATATA+AGG + chr4_1:85368535-85368554 Msa0580320:CDS 25.0%
! ATAATCTGTCAAGTAAACAT+TGG - chr4_1:85368712-85368731 None:intergenic 25.0%
!!! GTTTTAAATTTATTGTTGGG+AGG + chr4_1:85368861-85368880 Msa0580320:intron 25.0%
!! TATGAACGAATATGTTGTTT+CGG + chr4_1:85369043-85369062 Msa0580320:intron 25.0%
! AAATTAAGTAAACAACTCAG+TGG + chr4_1:85369158-85369177 Msa0580320:CDS 25.0%
! ATAACAAATCTTATAACAGC+AGG - chr4_1:85369619-85369638 None:intergenic 25.0%
! AGATATTATTGAAGTCAACA+TGG - chr4_1:85369660-85369679 None:intergenic 25.0%
! TGACTTCAATAATATCTTGA+TGG + chr4_1:85369663-85369682 Msa0580320:intron 25.0%
! AGAAAGTCTAACCATAAATA+GGG - chr4_1:85369949-85369968 None:intergenic 25.0%
! AAGAAAGTCTAACCATAAAT+AGG - chr4_1:85369950-85369969 None:intergenic 25.0%
! TGAATAACAAGTCAAAATTC+AGG - chr4_1:85370429-85370448 None:intergenic 25.0%
!! TATAAGTTAGCTTATTGAGA+TGG - chr4_1:85370555-85370574 None:intergenic 25.0%
! TAATGAGGAAACTTTATCTT+GGG - chr4_1:85370866-85370885 None:intergenic 25.0%
!!! TAATTCTTTTTTCTGGCAAT+TGG + chr4_1:85371047-85371066 Msa0580320:intron 25.0%
!!! AATTCTTTTTTCTGGCAATT+GGG + chr4_1:85371048-85371067 Msa0580320:intron 25.0%
! AAGGTAAATATAGATTAGGA+TGG - chr4_1:85371128-85371147 None:intergenic 25.0%
! TATCCTAAAACAAATGAAAC+AGG - chr4_1:85371244-85371263 None:intergenic 25.0%
!!! GTTTCATTTGTTTTAGGATA+TGG + chr4_1:85371244-85371263 Msa0580320:intron 25.0%
! TTATATGAATTCAAGAGGAT+AGG - chr4_1:85371358-85371377 None:intergenic 25.0%
!! ATGAGTTTAAGACTTCTATA+AGG - chr4_1:85371521-85371540 None:intergenic 25.0%
! TGTTGTTGTATTTACATAGT+TGG + chr4_1:85372127-85372146 Msa0580320:intron 25.0%
! GATGTTTGAACAATTAACAA+TGG - chr4_1:85372228-85372247 None:intergenic 25.0%
! GTTAATTGTTCAAACATCTA+AGG + chr4_1:85372230-85372249 Msa0580320:intron 25.0%
! AAAACCAACAAAAAAATCAG+AGG - chr4_1:85372281-85372300 None:intergenic 25.0%
! AAAAAGATCATTGTGATTTG+AGG - chr4_1:85372459-85372478 None:intergenic 25.0%
!! TCAAATCACAATGATCTTTT+TGG + chr4_1:85372458-85372477 Msa0580320:CDS 25.0%
!! TTGATTTGATTCTTCATTTC+TGG + chr4_1:85372567-85372586 Msa0580320:intron 25.0%
!!! TCTAAAAGTATTTTAGAAGG+GGG + chr4_1:85372648-85372667 Msa0580320:CDS 25.0%
!!! TAAGATGTTTTAGATGCATA+AGG - chr4_1:85372675-85372694 None:intergenic 25.0%
! GTTTACTATTGTAGCAAAAA+GGG - chr4_1:85372952-85372971 None:intergenic 25.0%
! TGTTTACTATTGTAGCAAAA+AGG - chr4_1:85372953-85372972 None:intergenic 25.0%
! ATGAATATCATATAACCCTT+AGG - chr4_1:85373078-85373097 None:intergenic 25.0%
!!! AATCATTGTAGCTTTATATC+TGG - chr4_1:85373136-85373155 None:intergenic 25.0%
!!! GCATTTAGTTTTGTTTTTTC+TGG + chr4_1:85373409-85373428 Msa0580320:intron 25.0%
!!! TAGTTCAGTTGATATTTTAC+AGG - chr4_1:85373525-85373544 None:intergenic 25.0%
! ATGCTTCTTTCAAAACAAAA+AGG - chr4_1:85373981-85374000 None:intergenic 25.0%
!!! TGAATGTCTTATTTACAACA+GGG + chr4_1:85374137-85374156 Msa0580320:intron 25.0%
! CAAATAGTCCATTAACAAAT+TGG - chr4_1:85374599-85374618 None:intergenic 25.0%
!!! AAAATTCTTTTGACTGTATC+AGG - chr4_1:85374668-85374687 None:intergenic 25.0%
! TTAAACAGTGTAGAAGTTAA+TGG + chr4_1:85375144-85375163 Msa0580320:intron 25.0%
! TAAACAGTGTAGAAGTTAAT+GGG + chr4_1:85375145-85375164 Msa0580320:intron 25.0%
!!! TGCTAATTGATTTTGAATGA+AGG - chr4_1:85375194-85375213 None:intergenic 25.0%
! ATATAAAATATTGGGAAGAG+AGG - chr4_1:85375263-85375282 None:intergenic 25.0%
!! CTCTTCCCAATATTTTATAT+TGG + chr4_1:85375263-85375282 Msa0580320:intron 25.0%
! CAGTCCCAATATAAAATATT+GGG - chr4_1:85375271-85375290 None:intergenic 25.0%
! TCAGTCCCAATATAAAATAT+TGG - chr4_1:85375272-85375291 None:intergenic 25.0%
! TTACTAATTGAGGATTATGT+TGG + chr4_1:85375373-85375392 Msa0580320:three_prime_UTR 25.0%
! TACTAATTGAGGATTATGTT+GGG + chr4_1:85375374-85375393 Msa0580320:three_prime_UTR 25.0%
! TTTCTATCATAGTACAATAG+CGG + chr4_1:85375699-85375718 Msa0580320:three_prime_UTR 25.0%
GCTCAACATTATATTAGTTC+AGG + chr4_1:85365001-85365020 Msa0580320:five_prime_UTR 30.0%
ATTACTTTGACTGATTGTTC+TGG + chr4_1:85365045-85365064 Msa0580320:intron 30.0%
!!! GAGGTTTTTGATTTTTCAAG+AGG + chr4_1:85365367-85365386 Msa0580320:CDS 30.0%
AGCTTAAACAATCATTGAAC+AGG + chr4_1:85365416-85365435 Msa0580320:CDS 30.0%
!! AGTTACTTGTTGTACAGTAA+TGG + chr4_1:85365491-85365510 Msa0580320:intron 30.0%
TTATAGACCATCACATGTTA+GGG - chr4_1:85365541-85365560 None:intergenic 30.0%
ATTATAGACCATCACATGTT+AGG - chr4_1:85365542-85365561 None:intergenic 30.0%
TAGATTGAAATACTAGCAAG+TGG + chr4_1:85365597-85365616 Msa0580320:intron 30.0%
!!! ATTTTTGGCAAGTTACATAG+AGG + chr4_1:85365821-85365840 Msa0580320:intron 30.0%
TTGTACCTGTATCTACTTAT+TGG + chr4_1:85365988-85366007 Msa0580320:intron 30.0%
TTAAGCCAATAAGTAGATAC+AGG - chr4_1:85365996-85366015 None:intergenic 30.0%
GATATCAAAGACACATACAA+AGG - chr4_1:85366118-85366137 None:intergenic 30.0%
CTTTCAGGAAAACTATAACA+AGG - chr4_1:85366251-85366270 None:intergenic 30.0%
! ATTTCACTAAGCATTGTACT+TGG + chr4_1:85366407-85366426 Msa0580320:intron 30.0%
GTTATGCTTATATGTGCTAT+CGG + chr4_1:85366461-85366480 Msa0580320:CDS 30.0%
CAAGATGTATGGTATATTCA+TGG + chr4_1:85366848-85366867 Msa0580320:CDS 30.0%
TGTATAAATGCCTAAACAGA+GGG - chr4_1:85367137-85367156 None:intergenic 30.0%
!!! GTTCTTCACCTCATTTTTTA+AGG + chr4_1:85367169-85367188 Msa0580320:CDS 30.0%
ATATAGTCTATGCAGCTTAA+AGG - chr4_1:85367294-85367313 None:intergenic 30.0%
CATAGACTATATCATACTTG+TGG + chr4_1:85367302-85367321 Msa0580320:intron 30.0%
AGTTGTTATATTCTCTTGAG+TGG - chr4_1:85367447-85367466 None:intergenic 30.0%
! TGACGATACTGAAGTTTTTA+AGG + chr4_1:85367508-85367527 Msa0580320:CDS 30.0%
!!! GAGACAAATGTTTTAATAGG+GGG - chr4_1:85367779-85367798 None:intergenic 30.0%
AAGCATTCTATTAAGATGCT+AGG - chr4_1:85367813-85367832 None:intergenic 30.0%
TTGTGAACATTAAGGACAAA+AGG - chr4_1:85367853-85367872 None:intergenic 30.0%
ATAACATGCTAAACAGATAG+TGG - chr4_1:85367881-85367900 None:intergenic 30.0%
ATAAGCAAAACTTAGAGACT+AGG - chr4_1:85367991-85368010 None:intergenic 30.0%
!!! CAATTTTAAAGCATGTTCTG+TGG + chr4_1:85368059-85368078 Msa0580320:intron 30.0%
TCATATAGCATGAAGATATG+TGG - chr4_1:85368093-85368112 None:intergenic 30.0%
CATATCTTCATGCTATATGA+AGG + chr4_1:85368093-85368112 Msa0580320:intron 30.0%
!!! ATTTTCACTTTAAGACCTAC+TGG - chr4_1:85368170-85368189 None:intergenic 30.0%
! ATTTTCTTAATCGAGTAAGC+AGG + chr4_1:85368328-85368347 Msa0580320:intron 30.0%
CTCATAGTTGAAGATGAAAA+TGG + chr4_1:85368482-85368501 Msa0580320:CDS 30.0%
TGTTTACTTGACAGATTATG+AGG + chr4_1:85368713-85368732 Msa0580320:intron 30.0%
GTTTACTTGACAGATTATGA+GGG + chr4_1:85368714-85368733 Msa0580320:intron 30.0%
GGAAAGACAATCACATTATA+TGG + chr4_1:85368824-85368843 Msa0580320:intron 30.0%
AGGTGCAACAAATTTATGAT+AGG - chr4_1:85369096-85369115 None:intergenic 30.0%
GATTCGAGACGATTTAATAA+AGG - chr4_1:85369116-85369135 None:intergenic 30.0%
!! CACAGGTCATTTTCAATATT+AGG + chr4_1:85369309-85369328 Msa0580320:intron 30.0%
CAAGTTAGTTACAAGTTGTT+AGG - chr4_1:85369407-85369426 None:intergenic 30.0%
! TGAGTTTCTCTTTTCCTAAT+AGG + chr4_1:85369545-85369564 Msa0580320:intron 30.0%
AAGCTCTACATATTCCTATT+AGG - chr4_1:85369562-85369581 None:intergenic 30.0%
! CAATAATATCTTGATGGCAT+TGG + chr4_1:85369669-85369688 Msa0580320:intron 30.0%
AAGACATTATATGACATCCA+AGG - chr4_1:85369701-85369720 None:intergenic 30.0%
! TCCTCCAATTTAACTTCTAT+TGG + chr4_1:85369735-85369754 Msa0580320:intron 30.0%
TCCAATAGAAGTTAAATTGG+AGG - chr4_1:85369739-85369758 None:intergenic 30.0%
GACTCCAATAGAAGTTAAAT+TGG - chr4_1:85369742-85369761 None:intergenic 30.0%
!!! GGCTTGTTTTTGTTTTTTCT+AGG + chr4_1:85369816-85369835 Msa0580320:intron 30.0%
!!! GGAAAACAGATTTTTGGTTA+TGG + chr4_1:85369981-85370000 Msa0580320:intron 30.0%
AAATCTATGTGAAATCACGA+AGG + chr4_1:85370020-85370039 Msa0580320:CDS 30.0%
AATCTATGTGAAATCACGAA+GGG + chr4_1:85370021-85370040 Msa0580320:CDS 30.0%
TCCAATGAGCTCTTAAAAAT+CGG - chr4_1:85370189-85370208 None:intergenic 30.0%
TGAAAATAAGTGAGCTTCAA+AGG - chr4_1:85370286-85370305 None:intergenic 30.0%
! TTGTATATTTTCTCCATAGC+TGG + chr4_1:85370365-85370384 Msa0580320:intron 30.0%
! TGTATATTTTCTCCATAGCT+GGG + chr4_1:85370366-85370385 Msa0580320:intron 30.0%
GCTTATTGAGATGGTAAAAT+AGG - chr4_1:85370546-85370565 None:intergenic 30.0%
TCAATAGGTGCTTAAATTAG+AGG - chr4_1:85370628-85370647 None:intergenic 30.0%
CTGCATCTAGTAATTTGAAA+GGG - chr4_1:85370676-85370695 None:intergenic 30.0%
ACTGCATCTAGTAATTTGAA+AGG - chr4_1:85370677-85370696 None:intergenic 30.0%
GTATACACAGAAGACAAAAA+AGG + chr4_1:85370773-85370792 Msa0580320:intron 30.0%
CTAATGAGGAAACTTTATCT+TGG - chr4_1:85370867-85370886 None:intergenic 30.0%
TTTGTGAAATATGCAAGGTT+TGG + chr4_1:85370977-85370996 Msa0580320:intron 30.0%
TTTACCTTGTAATATCTGCA+TGG + chr4_1:85371140-85371159 Msa0580320:intron 30.0%
!! GATCCTGTTTCATTTGTTTT+AGG + chr4_1:85371238-85371257 Msa0580320:intron 30.0%
AATTCAAGAGGATAGGAAAA+GGG - chr4_1:85371351-85371370 None:intergenic 30.0%
GATAGAAGTTCAGATACAAA+TGG - chr4_1:85371432-85371451 None:intergenic 30.0%
TTTGTATCTGAACTTCTATC+AGG + chr4_1:85371432-85371451 Msa0580320:CDS 30.0%
ATAATTAATGTCTGCACCTT+TGG + chr4_1:85371792-85371811 Msa0580320:intron 30.0%
CAGAAATGGATGGAAATTAT+AGG + chr4_1:85371828-85371847 Msa0580320:intron 30.0%
TGAAGGATCAAGATGTAATA+CGG + chr4_1:85371877-85371896 Msa0580320:CDS 30.0%
ACAACAGAAGATTTCTAACA+AGG - chr4_1:85372113-85372132 None:intergenic 30.0%
AGTAGTTTAAACTCCAAACA+AGG - chr4_1:85372187-85372206 None:intergenic 30.0%
CTATGATTATAATCAATGCC+AGG + chr4_1:85372320-85372339 Msa0580320:intron 30.0%
GCAAAATAAAACAAAAGACC+TGG - chr4_1:85372341-85372360 None:intergenic 30.0%
!!! CTAAAAGTATTTTAGAAGGG+GGG + chr4_1:85372649-85372668 Msa0580320:CDS 30.0%
CATCTTATGTGAAACTTCTA+CGG + chr4_1:85372688-85372707 Msa0580320:CDS 30.0%
! TTATTCTTTTCGATGCAGTT+CGG + chr4_1:85372773-85372792 Msa0580320:intron 30.0%
TAAATTGATCGAGACATTCT+TGG + chr4_1:85372812-85372831 Msa0580320:CDS 30.0%
! ACAAATTGTTTTCCAATCTG+TGG - chr4_1:85372855-85372874 None:intergenic 30.0%
TGTTCATTTATTTCCTTGGT+TGG + chr4_1:85373005-85373024 Msa0580320:intron 30.0%
! TATGTTTCATTCGTTTTCTC+TGG + chr4_1:85373097-85373116 Msa0580320:intron 30.0%
TTTATATCTGGAAGTAAGAG+GGG - chr4_1:85373124-85373143 None:intergenic 30.0%
CTTTATATCTGGAAGTAAGA+GGG - chr4_1:85373125-85373144 None:intergenic 30.0%
AACAACAACAACAACAAACA+AGG - chr4_1:85373243-85373262 None:intergenic 30.0%
ATTCAAATCAAAGGGAATAG+TGG - chr4_1:85373306-85373325 None:intergenic 30.0%
! TAGTCTGTGTCTGATATTTT+TGG + chr4_1:85373784-85373803 Msa0580320:intron 30.0%
TTGTTATGGATTCAATCATG+TGG + chr4_1:85373830-85373849 Msa0580320:CDS 30.0%
TGTTATGGATTCAATCATGT+GGG + chr4_1:85373831-85373850 Msa0580320:CDS 30.0%
!!! AAAGAAGCATACTGTTTTTG+AGG + chr4_1:85373991-85374010 Msa0580320:intron 30.0%
!!! AAGAAGCATACTGTTTTTGA+GGG + chr4_1:85373992-85374011 Msa0580320:intron 30.0%
! GGAAAGAACTTTGTTATGAA+TGG - chr4_1:85374085-85374104 None:intergenic 30.0%
TAAAATGATATATGCAGGAG+TGG - chr4_1:85374106-85374125 None:intergenic 30.0%
!! CTGAATGTCTTATTTACAAC+AGG + chr4_1:85374136-85374155 Msa0580320:intron 30.0%
! CAAGAAAGAGCACAAATAAT+TGG + chr4_1:85374344-85374363 Msa0580320:intron 30.0%
GAACAAAAACTGCATTACTT+GGG - chr4_1:85374442-85374461 None:intergenic 30.0%
GACTAATTTCATGAATTTGC+AGG + chr4_1:85374569-85374588 Msa0580320:intron 30.0%
TATCAGGAAATCTCGTATAT+GGG - chr4_1:85374652-85374671 None:intergenic 30.0%
AACTTCTCAATTTCTTGCTT+TGG - chr4_1:85374760-85374779 None:intergenic 30.0%
AGAAATTGAGAAGTTTGTAC+AGG + chr4_1:85374765-85374784 Msa0580320:intron 30.0%
AAAGAATGCTTTCTATTCCA+GGG + chr4_1:85375071-85375090 Msa0580320:CDS 30.0%
AAGAGAGGAAAAACTAAACT+TGG - chr4_1:85375248-85375267 None:intergenic 30.0%
! ATTTTATATTGGGACTGATG+TGG + chr4_1:85375274-85375293 Msa0580320:intron 30.0%
! TAGCTAAAACTCTGAAAATC+AGG - chr4_1:85375308-85375327 None:intergenic 30.0%
!! GATTATGTTGGGTCATTTTA+AGG + chr4_1:85375385-85375404 Msa0580320:three_prime_UTR 30.0%
TAATATCCTCTCTATTTGGA+GGG - chr4_1:85375631-85375650 None:intergenic 30.0%
ATAATATCCTCTCTATTTGG+AGG - chr4_1:85375632-85375651 None:intergenic 30.0%
CTTAAAACCCTAACATGTGA+TGG + chr4_1:85365531-85365550 Msa0580320:intron 35.0%
!!! ATTGGTTTTAACTAGCGAGT+TGG + chr4_1:85365654-85365673 Msa0580320:intron 35.0%
TGCAGGAAAAGGAAACTAAA+TGG - chr4_1:85366084-85366103 None:intergenic 35.0%
CATTACTACTGAGTCTTCTA+AGG - chr4_1:85366175-85366194 None:intergenic 35.0%
TACATCTTCTGAGTCTTCTA+AGG - chr4_1:85366207-85366226 None:intergenic 35.0%
! AAGCTTTTGCACAATAGCTT+AGG - chr4_1:85366274-85366293 None:intergenic 35.0%
TAAGCTATTGTGCAAAAGCT+TGG + chr4_1:85366273-85366292 Msa0580320:intron 35.0%
TCTCTTTATCATGCATGACT+TGG + chr4_1:85366315-85366334 Msa0580320:intron 35.0%
! TTTATCATGCATGACTTGGA+TGG + chr4_1:85366319-85366338 Msa0580320:intron 35.0%
ATATTTGAATCACCGTTGGT+AGG + chr4_1:85366561-85366580 Msa0580320:intron 35.0%
CAGAAAAATGAACCTACCAA+CGG - chr4_1:85366576-85366595 None:intergenic 35.0%
!!! TCACTTTTTATGTTTGCAGG+TGG + chr4_1:85366785-85366804 Msa0580320:intron 35.0%
GTGCAATATGTCAAGATGTA+TGG + chr4_1:85366837-85366856 Msa0580320:CDS 35.0%
ATGCAGTGCATGTTACAAAA+AGG - chr4_1:85366903-85366922 None:intergenic 35.0%
CTGTATAAATGCCTAAACAG+AGG - chr4_1:85367138-85367157 None:intergenic 35.0%
TTAGGCATTTATACAGAACC+TGG + chr4_1:85367142-85367161 Msa0580320:intron 35.0%
ACACAGTTCAATCATGTCAT+TGG - chr4_1:85367244-85367263 None:intergenic 35.0%
GATTGAACTGTGTTAGAATG+TGG + chr4_1:85367251-85367270 Msa0580320:intron 35.0%
AACAAACAACCCAATAATGC+AGG - chr4_1:85367345-85367364 None:intergenic 35.0%
! TGCATTATTGGGTTGTTTGT+TGG + chr4_1:85367344-85367363 Msa0580320:intron 35.0%
! GCATTATTGGGTTGTTTGTT+GGG + chr4_1:85367345-85367364 Msa0580320:intron 35.0%
TGATAGCCTTCTATTAATGC+AGG + chr4_1:85367400-85367419 Msa0580320:intron 35.0%
TGTGAACCTGCATTAATAGA+AGG - chr4_1:85367409-85367428 None:intergenic 35.0%
! TCAATCTGACTATTTAGAGC+AGG - chr4_1:85367566-85367585 None:intergenic 35.0%
AGTCAGATTGATACTGTATC+TGG + chr4_1:85367575-85367594 Msa0580320:intron 35.0%
TGGCATTCTTGTGAACATTA+AGG - chr4_1:85367861-85367880 None:intergenic 35.0%
ATAGCATGAAGATATGTGGT+AGG - chr4_1:85368089-85368108 None:intergenic 35.0%
TTAATCGAGTAAGCAGGTAT+CGG + chr4_1:85368334-85368353 Msa0580320:intron 35.0%
AGCATTCTCAACTTTGACAT+GGG - chr4_1:85368428-85368447 None:intergenic 35.0%
AAGCATTCTCAACTTTGACA+TGG - chr4_1:85368429-85368448 None:intergenic 35.0%
AATGCTTATGATCTGTCGAA+TGG + chr4_1:85368442-85368461 Msa0580320:CDS 35.0%
TTCAACTATGAGAACCTCTT+CGG - chr4_1:85368474-85368493 None:intergenic 35.0%
AAGAACATCATTGTCCTTCA+AGG - chr4_1:85368525-85368544 None:intergenic 35.0%
! AACAAAAGAGCAGTGTTTTC+TGG - chr4_1:85368799-85368818 None:intergenic 35.0%
! TGGTGTTAATGACCTAATGT+TGG + chr4_1:85368988-85369007 Msa0580320:intron 35.0%
AGGTTATTCACTCCAACATT+AGG - chr4_1:85369003-85369022 None:intergenic 35.0%
! GTAGAGTGTTATGATGCAAA+AGG + chr4_1:85369067-85369086 Msa0580320:intron 35.0%
GAGTGTATTCAAATTGTTCC+AGG - chr4_1:85369195-85369214 None:intergenic 35.0%
ACAATTTGAATACACTCTGC+TGG + chr4_1:85369198-85369217 Msa0580320:CDS 35.0%
CAATTTGAATACACTCTGCT+GGG + chr4_1:85369199-85369218 Msa0580320:CDS 35.0%
GTCAATCAAGCAATACCATA+TGG - chr4_1:85369273-85369292 None:intergenic 35.0%
! TGTTGAGGTATTTCCACTAT+TGG + chr4_1:85369588-85369607 Msa0580320:intron 35.0%
! GTTGAGGTATTTCCACTATT+GGG + chr4_1:85369589-85369608 Msa0580320:intron 35.0%
! TTGAGGTATTTCCACTATTG+GGG + chr4_1:85369590-85369609 Msa0580320:intron 35.0%
!! ATGCATGCATGGCTTTATAT+TGG + chr4_1:85369795-85369814 Msa0580320:intron 35.0%
!! AGACTTTCTTGATTTGTGAC+AGG + chr4_1:85369960-85369979 Msa0580320:intron 35.0%
! GTGACAGGAAAACAGATTTT+TGG + chr4_1:85369975-85369994 Msa0580320:intron 35.0%
CAATGAGCTCTTAAAAATCG+GGG - chr4_1:85370187-85370206 None:intergenic 35.0%
CCAATGAGCTCTTAAAAATC+GGG - chr4_1:85370188-85370207 None:intergenic 35.0%
ATAGGTGCTTAAATTAGAGG+CGG - chr4_1:85370625-85370644 None:intergenic 35.0%
TTTCCTCATTAGACTTCTGA+AGG + chr4_1:85370875-85370894 Msa0580320:intron 35.0%
TTCCTCATTAGACTTCTGAA+GGG + chr4_1:85370876-85370895 Msa0580320:intron 35.0%
AAACACTGAAGTCTAGCATA+TGG + chr4_1:85371090-85371109 Msa0580320:intron 35.0%
AGAACCATGCAGATATTACA+AGG - chr4_1:85371147-85371166 None:intergenic 35.0%
AATTATGGCCCTTATTACCT+GGG - chr4_1:85371324-85371343 None:intergenic 35.0%
AAATTATGGCCCTTATTACC+TGG - chr4_1:85371325-85371344 None:intergenic 35.0%
TAGGAAAAGGGAGGAAATTA+TGG - chr4_1:85371339-85371358 None:intergenic 35.0%
GAATTCAAGAGGATAGGAAA+AGG - chr4_1:85371352-85371371 None:intergenic 35.0%
CAACCTGAAATAGCAATTGT+GGG - chr4_1:85371398-85371417 None:intergenic 35.0%
TCAAGATCTGCAATAGTGAT+TGG - chr4_1:85371462-85371481 None:intergenic 35.0%
AGAGAGATGAATTTCTTCAG+CGG + chr4_1:85371660-85371679 Msa0580320:CDS 35.0%
AATTTCCATCCATTTCTGCA+GGG - chr4_1:85371826-85371845 None:intergenic 35.0%
TAATTTCCATCCATTTCTGC+AGG - chr4_1:85371827-85371846 None:intergenic 35.0%
!! AATCAACATTTTGATGTGCC+TGG - chr4_1:85371854-85371873 None:intergenic 35.0%
GACTGTGCTTAATATATTGC+AGG + chr4_1:85371899-85371918 Msa0580320:CDS 35.0%
!! TCTACCATTGTTGACTTGTT+CGG + chr4_1:85372066-85372085 Msa0580320:intron 35.0%
ACAAGCATGTAAAAGGAGTA+GGG + chr4_1:85372152-85372171 Msa0580320:intron 35.0%
AAACTACTATCTCGTGATCT+TGG + chr4_1:85372199-85372218 Msa0580320:intron 35.0%
!!! ACAGCCTCTGATTTTTTTGT+TGG + chr4_1:85372274-85372293 Msa0580320:intron 35.0%
! ACAAGTGTTGCATCTTCTTT+AGG + chr4_1:85372420-85372439 Msa0580320:CDS 35.0%
! CAAGTGTTGCATCTTCTTTA+GGG + chr4_1:85372421-85372440 Msa0580320:CDS 35.0%
GAACATAAGCATGTAGAATG+CGG - chr4_1:85373047-85373066 None:intergenic 35.0%
! TTATGTTCTGCTACTTCCTA+AGG + chr4_1:85373059-85373078 Msa0580320:intron 35.0%
! TATGTTCTGCTACTTCCTAA+GGG + chr4_1:85373060-85373079 Msa0580320:intron 35.0%
TTATATCTGGAAGTAAGAGG+GGG - chr4_1:85373123-85373142 None:intergenic 35.0%
GCTTTATATCTGGAAGTAAG+AGG - chr4_1:85373126-85373145 None:intergenic 35.0%
CTCTAATGTGCACTGAAAAA+CGG - chr4_1:85373184-85373203 None:intergenic 35.0%
! TTGTTGTTGTTGTTGTTACG+TGG + chr4_1:85373246-85373265 Msa0580320:intron 35.0%
AGGAAAACAATGAGTAGCTA+TGG - chr4_1:85373638-85373657 None:intergenic 35.0%
AGAAAGCAAGAAACAAAACC+TGG - chr4_1:85373681-85373700 None:intergenic 35.0%
!! ACACTGTTGATTCATGGAAA+AGG - chr4_1:85373704-85373723 None:intergenic 35.0%
!! ACTGAAACACTGTTGATTCA+TGG - chr4_1:85373710-85373729 None:intergenic 35.0%
TGCAGTTAACATCTCATACA+CGG - chr4_1:85373737-85373756 None:intergenic 35.0%
!! TCAGCAATTGAAGCTTGTTA+TGG + chr4_1:85373816-85373835 Msa0580320:CDS 35.0%
ATTCAATCATGTGGGCATTT+CGG + chr4_1:85373839-85373858 Msa0580320:CDS 35.0%
GAAAGGAATATTGCTGAAAC+AGG + chr4_1:85373868-85373887 Msa0580320:CDS 35.0%
AGTATGCAGAAAAAAACCCA+AGG - chr4_1:85373952-85373971 None:intergenic 35.0%
AGAGTTCTGTAATCAGTTCT+AGG + chr4_1:85374163-85374182 Msa0580320:CDS 35.0%
CGAACAAAAACTGCATTACT+TGG - chr4_1:85374443-85374462 None:intergenic 35.0%
!! CAGGTTACCCAATTTGTTAA+TGG + chr4_1:85374588-85374607 Msa0580320:intron 35.0%
GTATCAGGAAATCTCGTATA+TGG - chr4_1:85374653-85374672 None:intergenic 35.0%
! GTCAAAAGAATTTTCAGCTC+AGG + chr4_1:85374674-85374693 Msa0580320:CDS 35.0%
! CATAGAGATCTTTGTTATCC+TGG - chr4_1:85375015-85375034 None:intergenic 35.0%
CAAAGAATGCTTTCTATTCC+AGG + chr4_1:85375070-85375089 Msa0580320:CDS 35.0%
TTTCATCTTGCAACTCGATA+GGG - chr4_1:85375105-85375124 None:intergenic 35.0%
ATTTCATCTTGCAACTCGAT+AGG - chr4_1:85375106-85375125 None:intergenic 35.0%
! TATCGAGTTGCAAGATGAAA+TGG + chr4_1:85375105-85375124 Msa0580320:CDS 35.0%
!! GTAGAAGTTAATGGGCATTT+TGG + chr4_1:85375153-85375172 Msa0580320:intron 35.0%
!!! TTTTCAGAGTTTTAGCTAGC+CGG + chr4_1:85375310-85375329 Msa0580320:intron 35.0%
AATAATCTACACTCACCACA+TGG - chr4_1:85375350-85375369 None:intergenic 35.0%
ACAAAAATGGAAGACTCCTT+CGG + chr4_1:85375434-85375453 Msa0580320:three_prime_UTR 35.0%
AACCATATAGTAAGTGCACT+CGG - chr4_1:85375573-85375592 None:intergenic 35.0%
! CTAGAGATTTGAAGCTAGAA+AGG - chr4_1:85375674-85375693 None:intergenic 35.0%
!!! AGCAGATTTTGAAGCATGAG+TGG + chr4_1:85365171-85365190 Msa0580320:intron 40.0%
AACGATCTGTGAGAATTGCA+TGG + chr4_1:85365250-85365269 Msa0580320:exon 40.0%
GTGGTGATAACTGCATATCT+AGG + chr4_1:85365616-85365635 Msa0580320:intron 40.0%
GTGATAACTGCATATCTAGG+TGG + chr4_1:85365619-85365638 Msa0580320:intron 40.0%
! AGGTGGCTAGTTAGAACAAT+TGG + chr4_1:85365636-85365655 Msa0580320:intron 40.0%
GTATGGCTTTCGATGTGATT+TGG + chr4_1:85365700-85365719 Msa0580320:intron 40.0%
TTATCGCCTCAAAGTTAGAC+TGG + chr4_1:85365732-85365751 Msa0580320:intron 40.0%
TATCGCCTCAAAGTTAGACT+GGG + chr4_1:85365733-85365752 Msa0580320:intron 40.0%
CATTGCATGCCTTCTTATCA+TGG + chr4_1:85366523-85366542 Msa0580320:CDS 40.0%
TTCTTATCATGGATCCCCTT+GGG + chr4_1:85366534-85366553 Msa0580320:CDS 40.0%
CTGGAACTGGGAAAAACTTT+AGG - chr4_1:85366676-85366695 None:intergenic 40.0%
GATTTCGATATGCTGGAACT+GGG - chr4_1:85366688-85366707 None:intergenic 40.0%
AGATTTCGATATGCTGGAAC+TGG - chr4_1:85366689-85366708 None:intergenic 40.0%
AGCGTAAGATTTCGATATGC+TGG - chr4_1:85366695-85366714 None:intergenic 40.0%
TACGCTGCAATGTTTAACAG+AGG + chr4_1:85366709-85366728 Msa0580320:CDS 40.0%
TATATTCATGGGCCAATTGC+AGG + chr4_1:85366860-85366879 Msa0580320:CDS 40.0%
GTTAAGTATCTGTCTTACCG+CGG + chr4_1:85367106-85367125 Msa0580320:intron 40.0%
! TATTCTCTTGAGTGGATTCC+AGG - chr4_1:85367439-85367458 None:intergenic 40.0%
! CTATTTAGAGCAGGAGAAAG+TGG - chr4_1:85367557-85367576 None:intergenic 40.0%
AATAGGTCTGTTTGGACTAC+TGG + chr4_1:85367610-85367629 Msa0580320:intron 40.0%
TTTGGACTACTGGAATTCCT+TGG + chr4_1:85367620-85367639 Msa0580320:CDS 40.0%
CTACTGGAATTCCTTGGTTT+CGG + chr4_1:85367626-85367645 Msa0580320:CDS 40.0%
GGATTATCCAAACTTCGATG+TGG - chr4_1:85367663-85367682 None:intergenic 40.0%
GCAAAACTTAGAGACTAGGA+TGG - chr4_1:85367987-85368006 None:intergenic 40.0%
ATTAAGTGCATGGCGAGATA+CGG + chr4_1:85368132-85368151 Msa0580320:intron 40.0%
TCAACTATGAGAACCTCTTC+GGG - chr4_1:85368473-85368492 None:intergenic 40.0%
TATTGTCCGTGAAACCTTGA+AGG + chr4_1:85368508-85368527 Msa0580320:CDS 40.0%
CATTGTCCTTCAAGGTTTCA+CGG - chr4_1:85368517-85368536 None:intergenic 40.0%
! GAGGGAGACTCTTATTTACT+TGG + chr4_1:85368732-85368751 Msa0580320:CDS 40.0%
!! CCTGCTTTTCAGTATCATCA+TGG - chr4_1:85368768-85368787 None:intergenic 40.0%
CCATGATGATACTGAAAAGC+AGG + chr4_1:85368765-85368784 Msa0580320:CDS 40.0%
!!! ACACTGCTCTTTTGTTTTGC+TGG + chr4_1:85368803-85368822 Msa0580320:intron 40.0%
AAGTAAACAACTCAGTGGTG+AGG + chr4_1:85369163-85369182 Msa0580320:CDS 40.0%
TGGGCAATTGGATCTATATC+TGG + chr4_1:85369218-85369237 Msa0580320:CDS 40.0%
! AGCAGGTACTGTAAACCATA+TGG + chr4_1:85369255-85369274 Msa0580320:intron 40.0%
CTTTATATCCCTACATGCAC+AGG + chr4_1:85369292-85369311 Msa0580320:intron 40.0%
GAAAATGACCTGTGCATGTA+GGG - chr4_1:85369303-85369322 None:intergenic 40.0%
TGAAAATGACCTGTGCATGT+AGG - chr4_1:85369304-85369323 None:intergenic 40.0%
! GTAGAGCTTTTGATCTGTTG+AGG + chr4_1:85369573-85369592 Msa0580320:intron 40.0%
CTAATCTCTCTATGCATGCA+TGG + chr4_1:85369784-85369803 Msa0580320:intron 40.0%
TCGCTTGATAGGTATGTTGT+TGG + chr4_1:85370154-85370173 Msa0580320:intron 40.0%
CTCTTAAAAATCGGGGATAC+TGG - chr4_1:85370180-85370199 None:intergenic 40.0%
!! CCCGATTTTTAAGAGCTCAT+TGG + chr4_1:85370185-85370204 Msa0580320:CDS 40.0%
TTTATGCATGAGACACATCC+TGG + chr4_1:85370244-85370263 Msa0580320:CDS 40.0%
GGATAAAAAACCTGAACTCC+AGG - chr4_1:85370265-85370284 None:intergenic 40.0%
CAAGAAAATCAACCCAGCTA+TGG - chr4_1:85370381-85370400 None:intergenic 40.0%
GCAAGGTTTGGCTATAACTA+CGG + chr4_1:85370989-85371008 Msa0580320:intron 40.0%
CTGAAGTCTAGCATATGGTT+TGG + chr4_1:85371095-85371114 Msa0580320:intron 40.0%
! AAGTCTAGCATATGGTTTGG+TGG + chr4_1:85371098-85371117 Msa0580320:intron 40.0%
TTGTGATCACCCAGGTAATA+AGG + chr4_1:85371312-85371331 Msa0580320:intron 40.0%
TGTGATCACCCAGGTAATAA+GGG + chr4_1:85371313-85371332 Msa0580320:intron 40.0%
!! TGTCCCACAATTGCTATTTC+AGG + chr4_1:85371392-85371411 Msa0580320:intron 40.0%
CCAACCTGAAATAGCAATTG+TGG - chr4_1:85371399-85371418 None:intergenic 40.0%
!! CCACAATTGCTATTTCAGGT+TGG + chr4_1:85371396-85371415 Msa0580320:intron 40.0%
GATCTGCAATAGTGATTGGA+AGG - chr4_1:85371458-85371477 None:intergenic 40.0%
! TAGAAGGAGTGTATCTGATG+GGG - chr4_1:85371486-85371505 None:intergenic 40.0%
! GTAGAAGGAGTGTATCTGAT+GGG - chr4_1:85371487-85371506 None:intergenic 40.0%
AAGGCATACAGATTCGTAGA+AGG - chr4_1:85371502-85371521 None:intergenic 40.0%
TGAATTTCTTCAGCGGTTGA+TGG + chr4_1:85371667-85371686 Msa0580320:CDS 40.0%
GCAAGCAAAAGACCTGATTT+GGG - chr4_1:85371697-85371716 None:intergenic 40.0%
AGCAAGCAAAAGACCTGATT+TGG - chr4_1:85371698-85371717 None:intergenic 40.0%
ATTTCCATCCATTTCTGCAG+GGG - chr4_1:85371825-85371844 None:intergenic 40.0%
ATGGATGGAAATTATAGGCC+AGG + chr4_1:85371833-85371852 Msa0580320:CDS 40.0%
GACAAATCAGTTGCTGATGT+TGG + chr4_1:85372025-85372044 Msa0580320:intron 40.0%
!! CTACCATTGTTGACTTGTTC+GGG + chr4_1:85372067-85372086 Msa0580320:intron 40.0%
ATTCCCGAACAAGTCAACAA+TGG - chr4_1:85372073-85372092 None:intergenic 40.0%
GTTGGTCACAAGCATGTAAA+AGG + chr4_1:85372145-85372164 Msa0580320:intron 40.0%
CACAAGCATGTAAAAGGAGT+AGG + chr4_1:85372151-85372170 Msa0580320:intron 40.0%
TGTATTCGTCTGCAGTTAAG+AGG - chr4_1:85372403-85372422 None:intergenic 40.0%
! AGATCATTGTGATTTGAGGC+AGG - chr4_1:85372455-85372474 None:intergenic 40.0%
TGGACATGTTGAATGTGTAC+AGG + chr4_1:85372478-85372497 Msa0580320:CDS 40.0%
GATCGAGACATTCTTGGATA+AGG + chr4_1:85372818-85372837 Msa0580320:CDS 40.0%
ACAATTTGTGCCACCAATGA+TGG + chr4_1:85372866-85372885 Msa0580320:CDS 40.0%
AAAACGGCTTCAAATATGCG+AGG - chr4_1:85373168-85373187 None:intergenic 40.0%
!! CGTTTTTCAGTGCACATTAG+AGG + chr4_1:85373182-85373201 Msa0580320:CDS 40.0%
GAAGAGAGAAGAACTTAAGC+CGG - chr4_1:85373609-85373628 None:intergenic 40.0%
! GTTTTTGTGCTCCTAACCTT+GGG + chr4_1:85373933-85373952 Msa0580320:intron 40.0%
GCAGAAAAAAACCCAAGGTT+AGG - chr4_1:85373947-85373966 None:intergenic 40.0%
! ACCGATACTTTTCATAAGCC+TGG + chr4_1:85374228-85374247 Msa0580320:CDS 40.0%
! CCCAGGCTTATGAAAAGTAT+CGG - chr4_1:85374232-85374251 None:intergenic 40.0%
! CCGATACTTTTCATAAGCCT+GGG + chr4_1:85374229-85374248 Msa0580320:CDS 40.0%
CAGACATGTAATTTGAACCC+AGG - chr4_1:85374249-85374268 None:intergenic 40.0%
CTGGGTTCAAATTACATGTC+TGG + chr4_1:85374247-85374266 Msa0580320:CDS 40.0%
!!! GCTTCAGCATTTGTTTTGTC+TGG + chr4_1:85374271-85374290 Msa0580320:CDS 40.0%
!! AATTGGTTTGACCTTTCAGC+TGG + chr4_1:85374361-85374380 Msa0580320:intron 40.0%
ACTTGTAGCAACATCCCAAA+GGG - chr4_1:85374408-85374427 None:intergenic 40.0%
AGTCAGTTGTTCTAGCAAGA+GGG - chr4_1:85374553-85374572 None:intergenic 40.0%
TAGTCAGTTGTTCTAGCAAG+AGG - chr4_1:85374554-85374573 None:intergenic 40.0%
TTTGTCATCTTCTGTACTCC+AGG + chr4_1:85374994-85375013 Msa0580320:intron 40.0%
CAAAGATCTCTATGCTGAAG+AGG + chr4_1:85375021-85375040 Msa0580320:CDS 40.0%
TTCATCTTGCAACTCGATAG+GGG - chr4_1:85375104-85375123 None:intergenic 40.0%
!! AGATGAAATGGTGGACTCAT+AGG + chr4_1:85375117-85375136 Msa0580320:CDS 40.0%
!!! GGCATTTTGGTGTTTTTCAC+AGG + chr4_1:85375166-85375185 Msa0580320:intron 40.0%
! ACTCTGAAAATCAGGAACCA+TGG - chr4_1:85375300-85375319 None:intergenic 40.0%
!!! TTTCAGAGTTTTAGCTAGCC+GGG + chr4_1:85375311-85375330 Msa0580320:intron 40.0%
TTTAGGTGTGACCTAACTTC+TGG + chr4_1:85375471-85375490 Msa0580320:three_prime_UTR 40.0%
TACCGAGTGCACTTACTATA+TGG + chr4_1:85375568-85375587 Msa0580320:three_prime_UTR 40.0%
! TGCATAGCTTTCTAGCAACG+AGG + chr4_1:85364944-85364963 Msa0580320:five_prime_UTR 45.0%
CAACCTTTCCGTTCGAAATG+AGG - chr4_1:85364970-85364989 None:intergenic 45.0%
ATAAAGCTTCGCCATCTTGC+TGG - chr4_1:85365197-85365216 None:intergenic 45.0%
TATTCCTGATCTTGTCGCAG+CGG + chr4_1:85365214-85365233 Msa0580320:five_prime_UTR 45.0%
! TGTTCAGCTTTTGAGCGAAG+AGG + chr4_1:85365348-85365367 Msa0580320:intron 45.0%
ATCGCCTCAAAGTTAGACTG+GGG + chr4_1:85365734-85365753 Msa0580320:intron 45.0%
AGTCAGAGATGTGCAGGAAA+AGG - chr4_1:85366095-85366114 None:intergenic 45.0%
GCACAATAGCTTAGGCTTTC+AGG - chr4_1:85366266-85366285 None:intergenic 45.0%
GGCATGCAATGTAGATAGTG+TGG - chr4_1:85366514-85366533 None:intergenic 45.0%
CAAGGGGATCCATGATAAGA+AGG - chr4_1:85366535-85366554 None:intergenic 45.0%
CTTCTTATCATGGATCCCCT+TGG + chr4_1:85366533-85366552 Msa0580320:CDS 45.0%
!! TTTAGGAGTGTCTCAAGCTG+TGG - chr4_1:85366659-85366678 None:intergenic 45.0%
AGGTGGCATCCCTTCAATTT+GGG + chr4_1:85366802-85366821 Msa0580320:intron 45.0%
GATCCAAACACACCTGCAAT+TGG - chr4_1:85366875-85366894 None:intergenic 45.0%
ATTTGTGTTAGGCGGCAGTA+TGG - chr4_1:85367003-85367022 None:intergenic 45.0%
TCGGGGATATTTGTGTTAGG+CGG - chr4_1:85367011-85367030 None:intergenic 45.0%
ATTGCCATGTGCATATGCCT+CGG - chr4_1:85367030-85367049 None:intergenic 45.0%
CTAAACAGAGGGAAAAACCG+CGG - chr4_1:85367126-85367145 None:intergenic 45.0%
GTTAGAATGTGGCATTGCTG+AGG + chr4_1:85367262-85367281 Msa0580320:intron 45.0%
GTTTGAGCCACATCGAAGTT+TGG + chr4_1:85367653-85367672 Msa0580320:CDS 45.0%
TTAAGTGCATGGCGAGATAC+GGG + chr4_1:85368133-85368152 Msa0580320:intron 45.0%
!! ACTTTAAGACCTACTGGTCG+TGG - chr4_1:85368164-85368183 None:intergenic 45.0%
ATGCTTCCTGGTATGGTTGA+TGG + chr4_1:85368359-85368378 Msa0580320:CDS 45.0%
TGCTTCCTGGTATGGTTGAT+GGG + chr4_1:85368360-85368379 Msa0580320:CDS 45.0%
AACAACTCAGTGGTGAGGAT+TGG + chr4_1:85369168-85369187 Msa0580320:CDS 45.0%
AATACACTCTGCTGGGCAAT+TGG + chr4_1:85369206-85369225 Msa0580320:CDS 45.0%
TGGTTCCATGATAGAAGAGC+AGG + chr4_1:85369238-85369257 Msa0580320:CDS 45.0%
CAGTACCTGCTCTTCTATCA+TGG - chr4_1:85369246-85369265 None:intergenic 45.0%
! GATGGCATTGGAGTATACCT+TGG + chr4_1:85369681-85369700 Msa0580320:intron 45.0%
ATCCAGTTGCTTCGCTTGAT+AGG + chr4_1:85370143-85370162 Msa0580320:intron 45.0%
TACCTATCAAGCGAAGCAAC+TGG - chr4_1:85370148-85370167 None:intergenic 45.0%
GTGCTTAAATTAGAGGCGGA+GGG - chr4_1:85370621-85370640 None:intergenic 45.0%
TGCCCTTCAGAAGTCTAATG+AGG - chr4_1:85370881-85370900 None:intergenic 45.0%
TTGGCTATAACTACGGACGT+AGG + chr4_1:85370996-85371015 Msa0580320:intron 45.0%
TGGCTATAACTACGGACGTA+GGG + chr4_1:85370997-85371016 Msa0580320:intron 45.0%
TCAAGAGGATAGGAAAAGGG+AGG - chr4_1:85371348-85371367 None:intergenic 45.0%
! CGTAGAAGGAGTGTATCTGA+TGG - chr4_1:85371488-85371507 None:intergenic 45.0%
TTTCCATCCATTTCTGCAGG+GGG - chr4_1:85371824-85371843 None:intergenic 45.0%
AGGGATGCATTCTCCTTGTT+TGG + chr4_1:85372171-85372190 Msa0580320:intron 45.0%
CAGAGGCTGTGACTGAATAA+AGG - chr4_1:85372264-85372283 None:intergenic 45.0%
TTCGATGCAGTTCGGTTAAG+AGG + chr4_1:85372781-85372800 Msa0580320:intron 45.0%
TCGATGCAGTTCGGTTAAGA+GGG + chr4_1:85372782-85372801 Msa0580320:intron 45.0%
GCTGAAGATCAACCACAGAT+TGG + chr4_1:85372840-85372859 Msa0580320:CDS 45.0%
AGAACAGGATCCATCATTGG+TGG - chr4_1:85372879-85372898 None:intergenic 45.0%
!! ACCAATGATGGATCCTGTTC+TGG + chr4_1:85372878-85372897 Msa0580320:CDS 45.0%
!! CCAATGATGGATCCTGTTCT+GGG + chr4_1:85372879-85372898 Msa0580320:CDS 45.0%
CTAGCATAATCTCCCAGAAC+AGG - chr4_1:85372894-85372913 None:intergenic 45.0%
!! CTGTTCTGGGAGATTATGCT+AGG + chr4_1:85372892-85372911 Msa0580320:CDS 45.0%
TAGGAATGCTCCTGATGCAA+GGG + chr4_1:85372911-85372930 Msa0580320:CDS 45.0%
TCAAAGCAGCATACCAACCA+AGG - chr4_1:85373021-85373040 None:intergenic 45.0%
GAGGTGGATATCAAACGCAA+GGG - chr4_1:85373278-85373297 None:intergenic 45.0%
CTTGCGTTTGATATCCACCT+CGG + chr4_1:85373277-85373296 Msa0580320:intron 45.0%
!! AAAGGGAATAGTGGATTCCG+AGG - chr4_1:85373297-85373316 None:intergenic 45.0%
TTGAAGATTACCCTGAGCAC+CGG + chr4_1:85373587-85373606 Msa0580320:CDS 45.0%
AACAATGAGTAGCTATGGCG+CGG - chr4_1:85373633-85373652 None:intergenic 45.0%
CTTGACAAACAGATCAGTGC+AGG - chr4_1:85373658-85373677 None:intergenic 45.0%
ACTGATCTGTTTGTCAAGCC+AGG + chr4_1:85373660-85373679 Msa0580320:CDS 45.0%
TCTTCAGCATCTCCAACAAC+AGG - chr4_1:85373900-85373919 None:intergenic 45.0%
GGAGATGCTGAAGAAGTTTC+AGG + chr4_1:85373906-85373925 Msa0580320:CDS 45.0%
! TGCTGAAGAAGTTTCAGGTG+TGG + chr4_1:85373911-85373930 Msa0580320:intron 45.0%
! GGTTTTTGTGCTCCTAACCT+TGG + chr4_1:85373932-85373951 Msa0580320:intron 45.0%
TTGACCTTTCAGCTGGAAAC+TGG + chr4_1:85374368-85374387 Msa0580320:intron 45.0%
CTTGTAGCAACATCCCAAAG+GGG - chr4_1:85374407-85374426 None:intergenic 45.0%
GACTTGTAGCAACATCCCAA+AGG - chr4_1:85374409-85374428 None:intergenic 45.0%
GCATTACTTGGGTATGACTG+TGG - chr4_1:85374431-85374450 None:intergenic 45.0%
ACCTCAGCTGTTGTCATGTT+CGG - chr4_1:85374500-85374519 None:intergenic 45.0%
CGAGTTGCAAGATGAAATGG+TGG + chr4_1:85375108-85375127 Msa0580320:CDS 45.0%
!! GAAATGGTGGACTCATAGGT+AGG + chr4_1:85375121-85375140 Msa0580320:intron 45.0%
!!! TTCAGAGTTTTAGCTAGCCG+GGG + chr4_1:85375312-85375331 Msa0580320:intron 45.0%
CATGGACAAGTCTATATCCC+CGG - chr4_1:85375332-85375351 None:intergenic 45.0%
GGGATATAGACTTGTCCATG+TGG + chr4_1:85375332-85375351 Msa0580320:three_prime_UTR 45.0%
AAGAGTCATCATCACTCCGA+AGG - chr4_1:85375453-85375472 None:intergenic 45.0%
! CGGAGTGATGATGACTCTTT+AGG + chr4_1:85375454-85375473 Msa0580320:three_prime_UTR 45.0%
GTTTGTGCAGAAAACCCTTG+TGG + chr4_1:85375496-85375515 Msa0580320:three_prime_UTR 45.0%
TCCTCTCTATTTGGAGGGAT+GGG - chr4_1:85375626-85375645 None:intergenic 45.0%
ATCCTCTCTATTTGGAGGGA+TGG - chr4_1:85375627-85375646 None:intergenic 45.0%
!!! TATTTTTATTCATTTTATTT+TGG + chr4_1:85366932-85366951 Msa0580320:intron 5.0%
!! CAAATATTAAAAAAAAAAAT+TGG - chr4_1:85370961-85370980 None:intergenic 5.0%
CAACGAGGCCTCATTTCGAA+CGG + chr4_1:85364959-85364978 Msa0580320:five_prime_UTR 50.0%
AGGCCTCATTTCGAACGGAA+AGG + chr4_1:85364964-85364983 Msa0580320:five_prime_UTR 50.0%
ATCGCCCCAGTCTAACTTTG+AGG - chr4_1:85365741-85365760 None:intergenic 50.0%
!! AAAATGGTGCCACTTGCACC+AGG + chr4_1:85365877-85365896 Msa0580320:intron 50.0%
CAAAGGAGTCAGAGATGTGC+AGG - chr4_1:85366101-85366120 None:intergenic 50.0%
ATGTGCTATCGGCATCCCAA+AGG + chr4_1:85366472-85366491 Msa0580320:CDS 50.0%
TGTGCTATCGGCATCCCAAA+GGG + chr4_1:85366473-85366492 Msa0580320:CDS 50.0%
ACGTATCAGCTCAGCCCTTT+GGG - chr4_1:85366490-85366509 None:intergenic 50.0%
CAGGTGGCATCCCTTCAATT+TGG + chr4_1:85366801-85366820 Msa0580320:intron 50.0%
GCCTAACACAAATATCCCCG+AGG + chr4_1:85367010-85367029 Msa0580320:CDS 50.0%
GCCTCGGGGATATTTGTGTT+AGG - chr4_1:85367014-85367033 None:intergenic 50.0%
TTGCCATGTGCATATGCCTC+GGG - chr4_1:85367029-85367048 None:intergenic 50.0%
! CGCGGTTTTTCCCTCTGTTT+AGG + chr4_1:85367124-85367143 Msa0580320:intron 50.0%
TTGTTGGGTGTTCTGCTCTC+TGG + chr4_1:85367360-85367379 Msa0580320:intron 50.0%
! CTTGAGTGGATTCCAGGATG+CGG - chr4_1:85367433-85367452 None:intergenic 50.0%
CTCAAACAGCTCCGAAACCA+AGG - chr4_1:85367640-85367659 None:intergenic 50.0%
ATCAAGTTCGCAGAAGCTGC+AGG - chr4_1:85367684-85367703 None:intergenic 50.0%
TGCAGCTTCTGCGAACTTGA+TGG + chr4_1:85367683-85367702 Msa0580320:CDS 50.0%
GCAGCTTCTGCGAACTTGAT+GGG + chr4_1:85367684-85367703 Msa0580320:CDS 50.0%
TGCGAACTTGATGGGACTTC+AGG + chr4_1:85367692-85367711 Msa0580320:CDS 50.0%
ATCGGCAATGCTTCCTGGTA+TGG + chr4_1:85368352-85368371 Msa0580320:CDS 50.0%
! CAACGTCGTCAGCTTTATGC+TGG + chr4_1:85368401-85368420 Msa0580320:CDS 50.0%
TCGAATGGCTAAACCCGAAG+AGG + chr4_1:85368457-85368476 Msa0580320:CDS 50.0%
CGTGTAATCTGCAGATGCTG+AGG + chr4_1:85369135-85369154 Msa0580320:intron 50.0%
ACAGCAGGATACCCCAATAG+TGG - chr4_1:85369604-85369623 None:intergenic 50.0%
TGAGACACATCCTGGAGTTC+AGG + chr4_1:85370252-85370271 Msa0580320:CDS 50.0%
GGTGCTTAAATTAGAGGCGG+AGG - chr4_1:85370622-85370641 None:intergenic 50.0%
GCGTAAGTTTGTGATCACCC+AGG + chr4_1:85371304-85371323 Msa0580320:CDS 50.0%
! GTTGATGGAGCTCCCAAATC+AGG + chr4_1:85371682-85371701 Msa0580320:CDS 50.0%
! GTTTTTCCCCCCTGCAGAAA+TGG + chr4_1:85371814-85371833 Msa0580320:intron 50.0%
TTCCATCCATTTCTGCAGGG+GGG - chr4_1:85371823-85371842 None:intergenic 50.0%
! GCTGATGTTGGCTATGCGAA+CGG + chr4_1:85372037-85372056 Msa0580320:intron 50.0%
CCCAGAACAGGATCCATCAT+TGG - chr4_1:85372882-85372901 None:intergenic 50.0%
CTAGGAATGCTCCTGATGCA+AGG + chr4_1:85372910-85372929 Msa0580320:CDS 50.0%
TCCTGATGCAAGGGAATCTG+AGG + chr4_1:85372920-85372939 Msa0580320:CDS 50.0%
ACCTCAGATTCCCTTGCATC+AGG - chr4_1:85372924-85372943 None:intergenic 50.0%
CGAGGTGGATATCAAACGCA+AGG - chr4_1:85373279-85373298 None:intergenic 50.0%
AGAACTTAAGCCGGTGCTCA+GGG - chr4_1:85373600-85373619 None:intergenic 50.0%
AAGAACTTAAGCCGGTGCTC+AGG - chr4_1:85373601-85373620 None:intergenic 50.0%
AACAGGCCTGAACCTGTTGT+TGG + chr4_1:85373885-85373904 Msa0580320:CDS 50.0%
GCATCTCCAACAACAGGTTC+AGG - chr4_1:85373894-85373913 None:intergenic 50.0%
CACACCAGTTTCCAGCTGAA+AGG - chr4_1:85374375-85374394 None:intergenic 50.0%
TGTGCTAACTGAGCCCCTTT+GGG + chr4_1:85374391-85374410 Msa0580320:CDS 50.0%
TCCGAACATGACAACAGCTG+AGG + chr4_1:85374496-85374515 Msa0580320:CDS 50.0%
TCTCTATGCTGAAGAGGCTG+CGG + chr4_1:85375027-85375046 Msa0580320:CDS 50.0%
CGGCTCAGAGAGAAAGAGAA+CGG + chr4_1:85375047-85375066 Msa0580320:CDS 50.0%
TATTGGGACTGATGTGGCCA+TGG + chr4_1:85375280-85375299 Msa0580320:intron 50.0%
AGGTGTGACCTAACTTCTGG+CGG + chr4_1:85375474-85375493 Msa0580320:three_prime_UTR 50.0%
TGCACAAACCGCCAGAAGTT+AGG - chr4_1:85375485-85375504 None:intergenic 50.0%
CCTCTCTATTTGGAGGGATG+GGG - chr4_1:85375625-85375644 None:intergenic 50.0%
GTACAATAGCGGCGCTATAG+CGG + chr4_1:85375710-85375729 Msa0580320:three_prime_UTR 50.0%
AGCATGAGTGGCCAGCAAGA+TGG + chr4_1:85365183-85365202 Msa0580320:five_prime_UTR 55.0%
TTAGCCGCTGCGACAAGATC+AGG - chr4_1:85365221-85365240 None:intergenic 55.0%
TTATCCCCGGCAGGCACTAA+CGG + chr4_1:85365947-85365966 Msa0580320:intron 55.0%
CACGTATCAGCTCAGCCCTT+TGG - chr4_1:85366491-85366510 None:intergenic 55.0%
GGGCCAATTGCAGGTGTGTT+TGG + chr4_1:85366869-85366888 Msa0580320:intron 55.0%
ATCCCCGAGGCATATGCACA+TGG + chr4_1:85367023-85367042 Msa0580320:CDS 55.0%
TGCCATGTGCATATGCCTCG+GGG - chr4_1:85367028-85367047 None:intergenic 55.0%
ATGAGGTGAAGAACAGCGCC+AGG - chr4_1:85367163-85367182 None:intergenic 55.0%
! CGGGTTTTACCACGACCAGT+AGG + chr4_1:85368152-85368171 Msa0580320:intron 55.0%
!! CAGGTATCGGCAATGCTTCC+TGG + chr4_1:85368347-85368366 Msa0580320:intron 55.0%
!! CCTGGTATGGTTGATGGGCA+CGG + chr4_1:85368365-85368384 Msa0580320:CDS 55.0%
TCAGTGGTGAGGATTGGACC+TGG + chr4_1:85369174-85369193 Msa0580320:CDS 55.0%
CTGCAGGGGGGAAAAACCAA+AGG - chr4_1:85371811-85371830 None:intergenic 55.0%
TTCCCCCCTGCAGAAATGGA+TGG + chr4_1:85371818-85371837 Msa0580320:intron 55.0%
!! GGGAATAGTGGATTCCGAGG+TGG - chr4_1:85373294-85373313 None:intergenic 55.0%
GGGCATTTCGGCACACAGAA+AGG + chr4_1:85373851-85373870 Msa0580320:CDS 55.0%
GTGTGCTAACTGAGCCCCTT+TGG + chr4_1:85374390-85374409 Msa0580320:CDS 55.0%
CCCCATCCCTCCAAATAGAG+AGG + chr4_1:85375622-85375641 Msa0580320:three_prime_UTR 55.0%
GCGCTATAGCGGCGAATATG+CGG + chr4_1:85375721-85375740 Msa0580320:three_prime_UTR 55.0%
ATAGCGGCGAATATGCGGTG+CGG + chr4_1:85375726-85375745 Msa0580320:three_prime_UTR 55.0%
TGGTGGAAGCCTGGTGCAAG+TGG - chr4_1:85365889-85365908 None:intergenic 60.0%
ACTTGCACCAGGCTTCCACC+AGG + chr4_1:85365888-85365907 Msa0580320:intron 60.0%
! GACCCACACAGCCTTATCCC+CGG + chr4_1:85365934-85365953 Msa0580320:intron 60.0%
TGCCGGGGATAAGGCTGTGT+GGG - chr4_1:85365939-85365958 None:intergenic 60.0%
GTTAGTGCCTGCCGGGGATA+AGG - chr4_1:85365948-85365967 None:intergenic 60.0%
ATCTCCGTTAGTGCCTGCCG+GGG - chr4_1:85365954-85365973 None:intergenic 60.0%
CATCTCCGTTAGTGCCTGCC+GGG - chr4_1:85365955-85365974 None:intergenic 60.0%
GCATCTCCGTTAGTGCCTGC+CGG - chr4_1:85365956-85365975 None:intergenic 60.0%
GCAGGCACTAACGGAGATGC+TGG + chr4_1:85365956-85365975 Msa0580320:intron 60.0%
GCAGGTTCACATCCGCATCC+TGG + chr4_1:85367418-85367437 Msa0580320:intron 60.0%
CCGTGCCCATCAACCATACC+AGG - chr4_1:85368368-85368387 None:intergenic 60.0%
TCGATAGGGGCAATCAGCCC+TGG - chr4_1:85375091-85375110 None:intergenic 60.0%
TGCACCAGGCTTCCACCAGG+TGG + chr4_1:85365891-85365910 Msa0580320:intron 65.0%
GCACCAGGCTTCCACCAGGT+GGG + chr4_1:85365892-85365911 Msa0580320:intron 65.0%
CACCAGGCTTCCACCAGGTG+GGG + chr4_1:85365893-85365912 Msa0580320:intron 65.0%
TACCAAGACCGCACCCCACC+TGG - chr4_1:85365909-85365928 None:intergenic 65.0%
AGGTGGGGTGCGGTCTTGGT+AGG + chr4_1:85365908-85365927 Msa0580320:intron 65.0%
GGTGGGGTGCGGTCTTGGTA+GGG + chr4_1:85365909-85365928 Msa0580320:intron 65.0%
CTGCCGGGGATAAGGCTGTG+TGG - chr4_1:85365940-85365959 None:intergenic 65.0%
! CACACAGCCTTATCCCCGGC+AGG + chr4_1:85365938-85365957 Msa0580320:intron 65.0%
CACCCCACCTGGTGGAAGCC+TGG - chr4_1:85365898-85365917 None:intergenic 70.0%
GGCTTCCACCAGGTGGGGTG+CGG + chr4_1:85365898-85365917 Msa0580320:intron 70.0%
CAAGACCGCACCCCACCTGG+TGG - chr4_1:85365906-85365925 None:intergenic 70.0%
CACCAGGTGGGGTGCGGTCT+TGG + chr4_1:85365904-85365923 Msa0580320:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 85364943 85375757 85364943 ID=Msa0580320;Name=Msa0580320
chr4_1 mRNA 85364943 85375757 85364943 ID=Msa0580320-mRNA-1;Parent=Msa0580320;Name=Msa0580320-mRNA-1;_AED=0.16;_eAED=0.17;_QI=173|0.89|0.93|1|0.89|0.86|30|441|932
chr4_1 exon 85364943 85365022 85364943 ID=Msa0580320-mRNA-1:exon:31266;Parent=Msa0580320-mRNA-1
chr4_1 exon 85365176 85365283 85365176 ID=Msa0580320-mRNA-1:exon:31267;Parent=Msa0580320-mRNA-1
chr4_1 exon 85365355 85365437 85365355 ID=Msa0580320-mRNA-1:exon:31268;Parent=Msa0580320-mRNA-1
chr4_1 exon 85366440 85366578 85366440 ID=Msa0580320-mRNA-1:exon:31269;Parent=Msa0580320-mRNA-1
chr4_1 exon 85366662 85366730 85366662 ID=Msa0580320-mRNA-1:exon:31270;Parent=Msa0580320-mRNA-1
chr4_1 exon 85366804 85366881 85366804 ID=Msa0580320-mRNA-1:exon:31271;Parent=Msa0580320-mRNA-1
chr4_1 exon 85366999 85367061 85366999 ID=Msa0580320-mRNA-1:exon:31272;Parent=Msa0580320-mRNA-1
chr4_1 exon 85367146 85367190 85367146 ID=Msa0580320-mRNA-1:exon:31273;Parent=Msa0580320-mRNA-1
chr4_1 exon 85367422 85367529 85367422 ID=Msa0580320-mRNA-1:exon:31274;Parent=Msa0580320-mRNA-1
chr4_1 exon 85367615 85367713 85367615 ID=Msa0580320-mRNA-1:exon:31275;Parent=Msa0580320-mRNA-1
chr4_1 exon 85368350 85368556 85368350 ID=Msa0580320-mRNA-1:exon:31276;Parent=Msa0580320-mRNA-1
chr4_1 exon 85368727 85368786 85368727 ID=Msa0580320-mRNA-1:exon:31277;Parent=Msa0580320-mRNA-1
chr4_1 exon 85369149 85369259 85369149 ID=Msa0580320-mRNA-1:exon:31278;Parent=Msa0580320-mRNA-1
chr4_1 exon 85369982 85370079 85369982 ID=Msa0580320-mRNA-1:exon:31279;Parent=Msa0580320-mRNA-1
chr4_1 exon 85370165 85370273 85370165 ID=Msa0580320-mRNA-1:exon:31280;Parent=Msa0580320-mRNA-1
chr4_1 exon 85371260 85371325 85371260 ID=Msa0580320-mRNA-1:exon:31281;Parent=Msa0580320-mRNA-1
chr4_1 exon 85371414 85371512 85371414 ID=Msa0580320-mRNA-1:exon:31282;Parent=Msa0580320-mRNA-1
chr4_1 exon 85371623 85371703 85371623 ID=Msa0580320-mRNA-1:exon:31283;Parent=Msa0580320-mRNA-1
chr4_1 exon 85371831 85371920 85371831 ID=Msa0580320-mRNA-1:exon:31284;Parent=Msa0580320-mRNA-1
chr4_1 exon 85372414 85372499 85372414 ID=Msa0580320-mRNA-1:exon:31285;Parent=Msa0580320-mRNA-1
chr4_1 exon 85372629 85372709 85372629 ID=Msa0580320-mRNA-1:exon:31286;Parent=Msa0580320-mRNA-1
chr4_1 exon 85372791 85372973 85372791 ID=Msa0580320-mRNA-1:exon:31287;Parent=Msa0580320-mRNA-1
chr4_1 exon 85373137 85373203 85373137 ID=Msa0580320-mRNA-1:exon:31288;Parent=Msa0580320-mRNA-1
chr4_1 exon 85373571 85373681 85373571 ID=Msa0580320-mRNA-1:exon:31289;Parent=Msa0580320-mRNA-1
chr4_1 exon 85373787 85373929 85373787 ID=Msa0580320-mRNA-1:exon:31290;Parent=Msa0580320-mRNA-1
chr4_1 exon 85374158 85374299 85374158 ID=Msa0580320-mRNA-1:exon:31291;Parent=Msa0580320-mRNA-1
chr4_1 exon 85374380 85374517 85374380 ID=Msa0580320-mRNA-1:exon:31292;Parent=Msa0580320-mRNA-1
chr4_1 exon 85374591 85374695 85374591 ID=Msa0580320-mRNA-1:exon:31293;Parent=Msa0580320-mRNA-1
chr4_1 exon 85375016 85375138 85375016 ID=Msa0580320-mRNA-1:exon:31294;Parent=Msa0580320-mRNA-1
chr4_1 exon 85375317 85375757 85375317 ID=Msa0580320-mRNA-1:exon:31295;Parent=Msa0580320-mRNA-1
chr4_1 five_prime_UTR 85364943 85365022 85364943 ID=Msa0580320-mRNA-1:five_prime_utr;Parent=Msa0580320-mRNA-1
chr4_1 five_prime_UTR 85365176 85365268 85365176 ID=Msa0580320-mRNA-1:five_prime_utr;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85365269 85365283 85365269 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85365355 85365437 85365355 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85366440 85366578 85366440 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85366662 85366730 85366662 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85366804 85366881 85366804 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85366999 85367061 85366999 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85367146 85367190 85367146 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85367422 85367529 85367422 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85367615 85367713 85367615 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85368350 85368556 85368350 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85368727 85368786 85368727 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85369149 85369259 85369149 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85369982 85370079 85369982 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85370165 85370273 85370165 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85371260 85371325 85371260 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85371414 85371512 85371414 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85371623 85371703 85371623 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85371831 85371920 85371831 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85372414 85372499 85372414 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85372629 85372709 85372629 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85372791 85372973 85372791 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85373137 85373203 85373137 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85373571 85373681 85373571 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85373787 85373929 85373787 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85374158 85374299 85374158 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85374380 85374517 85374380 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85374591 85374695 85374591 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 CDS 85375016 85375138 85375016 ID=Msa0580320-mRNA-1:cds;Parent=Msa0580320-mRNA-1
chr4_1 three_prime_UTR 85375317 85375757 85375317 ID=Msa0580320-mRNA-1:three_prime_utr;Parent=Msa0580320-mRNA-1
Gene Sequence

>Msa0580320

ATGGCTATATTGAAACTTTTGAGCGAAGAGGTTTTTGATTTTTCAAGAGGAGAAATGACACAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGCGAATTTCAACTCATACATGAGTTATGCTTATATGTGCTATCGGCATCCCAAAGGGCTGAGCTGATACGTGCCACACTATCTACATTGCATGCCTTCTTATCATGGATCCCCTTGGGTTATATATTTGAATCACCGTTGCTTGAGACACTCCTAAAGTTTTTCCCAGTTCCAGCATATCGAAATCTTACGCTGCAATGTTTAACAGAGGTGGCATCCCTTCAATTTGGGAATTTTTATGATGTGCAATATGTCAAGATGTATGGTATATTCATGGGCCAATTGCAGACCATACTGCCGCCTAACACAAATATCCCCGAGGCATATGCACATGGCAATAGTGAAGAACAAGCATTTATACAGAACCTGGCGCTGTTCTTCACCTCATTTTTTAAGGTTCACATCCGCATCCTGGAATCCACTCAAGAGAATATAACAACTTTGCTTTTGGGCCTTGAATATCTTATCAGCATTTCATACGTTGACGATACTGAAGTTTTTAAGGTCTGTTTGGACTACTGGAATTCCTTGGTTTCGGAGCTGTTTGAGCCACATCGAAGTTTGGATAATCCTGCAGCTTCTGCGAACTTGATGGGACTTCAGGTATCGGCAATGCTTCCTGGTATGGTTGATGGGCACGGTTCTCAGCTTCTTCAACGTCGTCAGCTTTATGCTGGTCCCATGTCAAAGTTGAGAATGCTTATGATCTGTCGAATGGCTAAACCCGAAGAGGTTCTCATAGTTGAAGATGAAAATGGGAATATTGTCCGTGAAACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTTATTTACTTGGCACATCTTGACCATGATGATACTGAAAAGCAGATGCTGAGGAAATTAAGTAAACAACTCAGTGGTGAGGATTGGACCTGGAACAATTTGAATACACTCTGCTGGGCAATTGGATCTATATCTGGTTCCATGATAGAAGAGCAGGAAAACAGATTTTTGGTTATGGTAATTCGTGATTTATTAAATCTATGTGAAATCACGAAGGGAAAAGATAACAAAGCAGTTATTGCAAGTAATATCATGTATGTTGTTGGCCAGTATCCCCGATTTTTAAGAGCTCATTGGAAGTTTCTTAAAACTGTTGTGAACAAGTTGTTTGAGTTTATGCATGAGACACATCCTGGAGTTCAGGATATGGCGTGTGACACTTTTTTGAAAATAGTTCAGAAGTGCAAGCGTAAGTTTGTGATCACCCAGGTTGGCGAAAACGAGCCATTTGTATCTGAACTTCTATCAGGCCTTCCAATCACTATTGCAGATCTTGAACCCCATCAGATACACTCCTTCTACGAATCTGTTGCTCATATGATTCAAGCAGAGTCTGATTCACAGAAGAGAGATGAATTTCTTCAGCGGTTGATGGAGCTCCCAAATCAGAAATGGATGGAAATTATAGGCCAGGCACATCAAAATGTTGATTTTTTGAAGGATCAAGATGTAATACGGACTGTGCTTAATATATTGCAGACGAATACAAGTGTTGCATCTTCTTTAGGGACATTTTTCCTGCCTCAAATCACAATGATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGTGAGCTTATTTCTAAAAGTATTTTAGAAGGGGGGCCTTATGCATCTAAAACATCTTATGTGAAACTTCTACGTTCGGTTAAGAGGGAGACACTTAAATTGATCGAGACATTCTTGGATAAGGCTGAAGATCAACCACAGATTGGAAAACAATTTGTGCCACCAATGATGGATCCTGTTCTGGGAGATTATGCTAGGAATGCTCCTGATGCAAGGGAATCTGAGGTTTTGTCCCTTTTTGCTACAATAGTAAACAAATATAAAGCTACAATGATTGAAGATGTGCCTCGCATATTTGAAGCCGTTTTTCAGTGCACATTAGAGATGATTACAAAAAACTTTGAAGATTACCCTGAGCACCGGCTTAAGTTCTTCTCTCTTCTCCGCGCCATAGCTACTCATTGTTTTCCTGCACTGATCTGTTTGTCAAGCCAGTCTGTGTCTGATATTTTTGGTCATCTGTTTCAGCAATTGAAGCTTGTTATGGATTCAATCATGTGGGCATTTCGGCACACAGAAAGGAATATTGCTGAAACAGGCCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGTGGCTCAGAGTTCTGTAATCAGTTCTAGGACATACTTCTTGACAACTGAGAATGAGATATTTGCTGTTTTGACCGATACTTTTCATAAGCCTGGGTTCAAATTACATGTCTGGTGCTTCAGCATTTGTTTTGTCTGGTACTGTCTGGAAACTGGTGTGCTAACTGAGCCCCTTTGGGATGTTGCTACAAGTCCACAGTCATACCCAAGTAATGCAGTTTTTGTTCGTGAGTATACTATAAAGCTTCTAAGTGCTTCTTTTCCGAACATGACAACAGCTGAGGTTACCCAATTTGTTAATGGACTATTTGAGTCTACAAATGATCTCTCTACATTTAAAACCCATATACGAGATTTCCTGATACAGTCAAAAGAATTTTCAGCTCAGGATAACAAAGATCTCTATGCTGAAGAGGCTGCGGCTCAGAGAGAAAGAGAACGGCAAAGAATGCTTTCTATTCCAGGGCTGATTGCCCCTATCGAGTTGCAAGATGAAATGGTGGACTCATAG
Protein sequence

>Msa0580320

MAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPVPAYRNLTLQCLTEVASLQFGNFYDVQYVKMYGIFMGQLQTILPPNTNIPEAYAHGNSEEQAFIQNLALFFTSFFKVHIRILESTQENITTLLLGLEYLISISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDNPAASANLMGLQVSAMLPGMVDGHGSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMIEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLMELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDMLNVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQSVSDIFGHLFQQLKLVMDSIMWAFRHTERNIAETGLNLLLEMLKKFQVAQSSVISSRTYFLTTENEIFAVLTDTFHKPGFKLHVWCFSICFVWYCLETGVLTEPLWDVATSPQSYPSNAVFVREYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS*