AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0140030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140030 MtrunA17_Chr6g0480851 93.963 762 41 1 1 757 1 762 0.0 1465
Msa0140030 MtrunA17_Chr6g0480781 76.812 759 156 3 1 754 1 744 0.0 1204
Msa0140030 MtrunA17_Chr6g0480671 65.891 774 238 5 1 754 1 768 0.0 991
Msa0140030 MtrunA17_Chr6g0481021 70.059 678 179 3 91 746 20 695 0.0 941
Msa0140030 MtrunA17_Chr6g0480741 64.106 755 192 7 1 749 1 682 0.0 914
Msa0140030 MtrunA17_Chr6g0480681 58.154 791 217 13 1 755 1 713 0.0 852
Msa0140030 MtrunA17_Chr5g0395411 81.203 399 48 3 1 398 1 373 0.0 651
Msa0140030 MtrunA17_Chr5g0395421 88.393 336 39 0 382 717 18 353 0.0 595
Msa0140030 MtrunA17_Chr6g0480791 77.850 307 55 2 1 306 1 295 8.89e-170 489
Msa0140030 MtrunA17_Chr3g0139071 38.889 594 328 13 184 756 73 652 2.33e-133 412
Msa0140030 MtrunA17_Chr3g0126541 39.073 604 327 14 167 745 55 642 2.38e-133 411
Msa0140030 MtrunA17_Chr2g0305771 38.765 583 318 14 184 743 43 609 2.97e-133 410
Msa0140030 MtrunA17_Chr4g0073941 39.353 587 322 11 184 751 99 670 3.14e-131 406
Msa0140030 MtrunA17_Chr4g0028861 39.153 567 316 11 184 736 124 675 4.63e-129 399
Msa0140030 MtrunA17_Chr1g0158861 36.897 580 330 14 184 745 83 644 2.45e-126 393
Msa0140030 MtrunA17_Chr2g0326871 38.128 577 328 12 184 746 77 638 3.46e-126 392
Msa0140030 MtrunA17_Chr7g0275581 38.382 581 324 13 184 745 83 648 2.74e-125 390
Msa0140030 MtrunA17_Chr7g0228181 36.960 579 329 12 184 741 44 607 2.34e-123 384
Msa0140030 MtrunA17_Chr6g0480771 70.000 260 75 1 496 755 12 268 3.66e-122 367
Msa0140030 MtrunA17_Chr4g0001481 38.261 575 317 13 184 736 101 659 7.27e-122 382
Msa0140030 MtrunA17_Chr1g0181121 36.968 587 340 11 184 756 44 614 1.39e-119 375
Msa0140030 MtrunA17_Chr3g0125651 37.177 581 325 14 184 741 36 599 1.43e-117 370
Msa0140030 MtrunA17_Chr8g0347121 34.142 618 332 12 183 744 59 657 1.13e-114 363
Msa0140030 MtrunA17_Chr8g0360821 36.007 586 333 15 183 743 61 629 1.62e-111 353
Msa0140030 MtrunA17_Chr6g0480841 79.612 206 42 0 550 755 2 207 4.82e-109 331
Msa0140030 MtrunA17_Chr7g0218341 35.085 590 348 13 184 751 109 685 1.21e-93 307
Msa0140030 MtrunA17_Chr2g0318561 35.129 464 268 8 300 743 2 452 1.58e-81 269
Msa0140030 MtrunA17_Chr6g0480751 45.183 301 79 5 1 301 1 215 2.96e-72 235
Msa0140030 MtrunA17_Chr6g0480821 60.000 185 69 1 301 480 25 209 9.80e-67 220
Msa0140030 MtrunA17_Chr6g0480761 58.170 153 56 2 316 460 13 165 9.07e-52 179
Msa0140030 MtrunA17_Chr2g0326861 35.829 187 113 3 259 439 14 199 5.59e-33 127
Msa0140030 MtrunA17_Chr6g0480831 75.342 73 17 1 465 537 1 72 2.15e-22 91.7
Msa0140030 MtrunA17_Chr2g0318551 31.148 122 76 4 184 303 63 178 1.69e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140030 AT3G17700.1 58.161 772 290 9 2 752 3 762 0.0 860
Msa0140030 AT3G17690.1 56.054 735 290 10 33 751 9 726 0.0 825
Msa0140030 AT3G17700.2 58.174 679 251 9 2 659 3 669 0.0 762
Msa0140030 AT3G17690.2 55.399 639 254 9 33 655 9 632 0.0 708
Msa0140030 AT3G17690.3 52.381 525 221 8 29 537 5 516 0.0 539
Msa0140030 AT5G53130.1 40.000 570 306 11 184 736 84 634 1.09e-134 415
Msa0140030 AT1G19780.1 40.933 579 307 13 184 741 97 661 1.93e-134 416
Msa0140030 AT1G01340.1 37.819 587 331 14 183 751 62 632 2.16e-131 406
Msa0140030 AT1G01340.2 37.819 587 331 14 183 751 67 637 2.24e-131 407
Msa0140030 AT2G24610.1 40.206 582 314 15 184 745 72 639 3.46e-130 404
Msa0140030 AT2G28260.2 38.850 574 318 12 184 741 28 584 4.27e-130 401
Msa0140030 AT1G15990.1 40.306 588 311 14 184 749 90 659 4.28e-130 404
Msa0140030 AT2G28260.1 38.850 574 318 12 184 741 68 624 5.95e-130 402
Msa0140030 AT2G24610.2 39.425 591 324 14 184 754 87 663 9.38e-130 403
Msa0140030 AT4G01010.1 37.372 586 336 11 183 751 67 638 9.80e-130 402
Msa0140030 AT4G01010.2 37.372 586 336 11 183 751 67 638 9.80e-130 402
Msa0140030 AT4G30360.1 37.907 583 328 12 184 746 71 639 4.07e-129 401
Msa0140030 AT4G30560.5 40.134 598 306 14 184 751 77 652 1.29e-128 399
Msa0140030 AT4G30560.2 40.134 598 306 14 184 751 77 652 1.29e-128 399
Msa0140030 AT4G30560.3 40.134 598 306 14 184 751 77 652 1.29e-128 399
Msa0140030 AT4G30560.1 40.134 598 306 14 184 751 103 678 2.06e-128 399
Msa0140030 AT4G30560.4 40.134 598 306 14 184 751 103 678 2.06e-128 399
Msa0140030 AT2G23980.6 39.931 581 310 13 184 741 76 640 1.44e-125 392
Msa0140030 AT2G23980.9 39.931 581 310 13 184 741 103 667 2.10e-125 392
Msa0140030 AT2G23980.10 39.931 581 310 13 184 741 103 667 2.10e-125 392
Msa0140030 AT2G23980.1 39.931 581 310 13 184 741 103 667 2.10e-125 392
Msa0140030 AT2G23980.4 39.931 581 310 13 184 741 103 667 2.10e-125 392
Msa0140030 AT2G23980.5 39.931 581 310 13 184 741 103 667 2.10e-125 392
Msa0140030 AT5G57940.1 39.206 579 316 11 184 741 88 651 2.14e-125 391
Msa0140030 AT5G57940.2 39.206 579 316 11 184 741 88 651 2.14e-125 391
Msa0140030 AT5G57940.3 39.206 579 316 11 184 741 81 644 2.14e-125 391
Msa0140030 AT2G23980.3 38.576 604 309 14 184 741 103 690 2.07e-120 380
Msa0140030 AT2G23980.2 38.576 604 309 14 184 741 103 690 2.07e-120 380
Msa0140030 AT2G23980.8 38.576 604 309 14 184 741 103 690 2.07e-120 380
Msa0140030 AT2G23980.7 38.576 604 309 14 184 741 103 690 2.07e-120 380
Msa0140030 AT5G14870.1 37.158 584 327 16 184 744 40 606 9.27e-120 376
Msa0140030 AT2G46430.1 37.438 601 319 16 184 751 72 648 5.28e-119 374
Msa0140030 AT2G46430.2 37.438 601 319 16 184 751 72 648 5.28e-119 374
Msa0140030 AT3G48010.1 36.408 618 348 17 151 743 16 613 4.81e-118 372
Msa0140030 AT5G54250.2 33.333 588 348 14 184 743 79 650 6.38e-102 329
Msa0140030 AT5G54250.1 33.333 588 348 14 184 743 79 650 6.38e-102 329
Msa0140030 AT5G54250.4 33.333 588 348 14 184 743 79 650 6.38e-102 329
Msa0140030 AT5G15410.1 36.332 578 329 10 184 735 113 677 1.01e-100 327
Msa0140030 AT5G15410.2 36.332 578 329 10 184 735 112 676 1.28e-100 326
Msa0140030 AT5G54250.3 33.220 587 345 15 184 743 79 645 5.97e-99 321
Msa0140030 AT1G19780.2 40.173 463 242 13 300 741 2 450 9.41e-95 305
Msa0140030 AT2G46450.4 31.463 588 346 14 190 750 35 592 8.12e-88 290
Msa0140030 AT2G46450.1 31.463 588 346 14 190 750 35 592 8.12e-88 290
Msa0140030 AT2G46440.1 32.943 598 339 16 190 751 35 606 8.58e-88 289
Msa0140030 AT2G46450.3 30.952 588 326 16 190 750 22 556 3.42e-80 269
Msa0140030 AT2G46450.2 30.952 588 326 16 190 750 35 569 4.47e-80 269
Msa0140030 AT2G46440.2 35.616 438 225 14 349 751 13 428 1.07e-61 214

Find 189 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCCACAATTCTCTTTA+TGG 0.072433 1_3:+74145939 Msa0140030:intron
TTCTGCTCTTCATGTATTCC+TGG 0.236305 1_3:+74145996 Msa0140030:CDS
AATATGTGTATGCACTCTTT+TGG 0.256005 1_3:+74147955 Msa0140030:CDS
TAGAATAGTGGTATGCTTAT+AGG 0.263460 1_3:+74151104 Msa0140030:three_prime_UTR
GTTTATTGTGCGTGGAAAAT+TGG 0.274539 1_3:+74150020 Msa0140030:CDS
TGAAGAATTCAAACAATCTT+TGG 0.276073 1_3:-74147862 None:intergenic
TTCCATTCCTATGGCTTCTC+TGG 0.284126 1_3:+74145301 Msa0140030:CDS
CTTTGCAGCAAACAGAATTC+AGG 0.285107 1_3:+74150961 Msa0140030:CDS
AATTGGTTCAAAATAGCTTC+TGG 0.291149 1_3:+74143374 Msa0140030:five_prime_UTR
GAGTCAAGGGTTGTTGGTGC+TGG 0.301405 1_3:+74146621 Msa0140030:CDS
ATCTGGGAATATATTGTATA+AGG 0.301572 1_3:-74147002 None:intergenic
ATGCATACTTTAACGTGAAT+TGG 0.303983 1_3:+74143357 Msa0140030:five_prime_UTR
GGTTCATGCTGGTATCTCTT+TGG 0.309664 1_3:+74147141 Msa0140030:CDS
CCTTGAGTTTCTCTTTAATC+AGG 0.315455 1_3:+74143404 Msa0140030:five_prime_UTR
ATGTCTGTCTGGAGATCTTC+TGG 0.319596 1_3:-74149560 None:intergenic
TGAAAAGGATTTCCAGTTGC+AGG 0.328009 1_3:-74145425 None:intergenic
GCTTACCAGAAGAACTTAAA+AGG 0.333543 1_3:+74149348 Msa0140030:CDS
AAGGGGTGTTCCTGAGAAAA+TGG 0.334550 1_3:+74149523 Msa0140030:CDS
ATACAGACGACATACATTAA+AGG 0.335319 1_3:+74149955 Msa0140030:CDS
TATGGTGACGCCAAAGGATA+TGG 0.337298 1_3:+74145957 Msa0140030:CDS
GGACCACTCATTTGGCTAAC+AGG 0.342078 1_3:-74145389 None:intergenic
CAGAACTTTCTTCAGGCTCT+TGG 0.347851 1_3:+74149032 Msa0140030:CDS
AGAATAGTGGTATGCTTATA+GGG 0.352341 1_3:+74151105 Msa0140030:three_prime_UTR
CTGGTATCTCTTTGGCCTAC+AGG 0.353050 1_3:+74147149 Msa0140030:CDS
CCCTAGACGTAGAAGATTCT+TGG 0.356560 1_3:-74146977 None:intergenic
AATTGCGACCAAGCAAAATA+TGG 0.356880 1_3:-74146069 None:intergenic
CTGAATTCTGTTTGCTGCAA+AGG 0.357315 1_3:-74150960 None:intergenic
ATGCTATCCGGCCATGTTGT+TGG 0.360446 1_3:+74147120 Msa0140030:CDS
TTAGGTATGAATCACCTTAC+TGG 0.360958 1_3:+74150933 Msa0140030:intron
TCACGAATGGCGTCTAAGAT+AGG 0.365376 1_3:-74149925 None:intergenic
CGATGCATGGAGCCAGGATC+AGG 0.373012 1_3:+74147836 Msa0140030:CDS
TTTATCCTACCAAGTTCCTT+GGG 0.382855 1_3:+74146934 Msa0140030:CDS
CCAAGTTCCTTGGGGTCATC+AGG 0.385649 1_3:+74146943 Msa0140030:CDS
AAACATACAGAACTTTCTTC+AGG 0.386919 1_3:+74149025 Msa0140030:CDS
CTCTTTACAATGTCCATCAT+AGG 0.393451 1_3:+74148969 Msa0140030:CDS
CATATAATGGACCACTCATT+TGG 0.395071 1_3:-74145397 None:intergenic
AGTCAAGGGTTGTTGGTGCT+GGG 0.402836 1_3:+74146622 Msa0140030:CDS
ATTTATCCTACCAAGTTCCT+TGG 0.403214 1_3:+74146933 Msa0140030:CDS
TGCTTCAATTTCCATTCCTA+TGG 0.403389 1_3:+74145292 Msa0140030:CDS
GAGGGTTAACCAATGTTTGC+GGG 0.406787 1_3:+74147755 Msa0140030:intron
AAATTCACCATGATAAATAT+AGG 0.409422 1_3:+74151216 Msa0140030:three_prime_UTR
TTCAGGTTGCATGGAGATAC+AGG 0.409660 1_3:+74150978 Msa0140030:CDS
TGTTCCTGAGAAAATGGTTC+TGG 0.409988 1_3:+74149529 Msa0140030:CDS
TTATATGCTTCTCCTGCAAC+TGG 0.411022 1_3:+74145413 Msa0140030:CDS
CCGGTATGTCCGACAAGATT+CGG 0.418379 1_3:-74145341 None:intergenic
CGTCGGAGAGGATGGAATTC+CGG 0.422155 1_3:+74150047 Msa0140030:CDS
TACAATGTCCATCATAGGAT+TGG 0.422433 1_3:+74148974 Msa0140030:CDS
GCATACCACTATTCTATTCC+AGG 0.425028 1_3:-74151097 None:intergenic
AGGAAGTAAAATTCTCAGTC+AGG 0.426764 1_3:+74149975 Msa0140030:CDS
ATTGGTTCAAAATAGCTTCT+GGG 0.430791 1_3:+74143375 Msa0140030:five_prime_UTR
TTGCGGAGCCCTCGTGTTCA+AGG 0.432055 1_3:+74150377 Msa0140030:CDS
TCTCCTGAGTCAAGGGTTGT+TGG 0.433479 1_3:+74146615 Msa0140030:CDS
CTGAGCAACTTTGAAGTAAG+TGG 0.434954 1_3:-74145591 None:intergenic
TAGGGTCATCCTCAGCCATA+TGG 0.436659 1_3:-74149906 None:intergenic
GTTCGTGCCTATATTTATCA+TGG 0.437522 1_3:-74151223 None:intergenic
AATCTTTGGCGCCCTGATCC+TGG 0.437765 1_3:-74147848 None:intergenic
ACTATTATATTATTCTGAAA+AGG 0.441915 1_3:-74145440 None:intergenic
TTTCTTAAACATTCTTCTCC+AGG 0.444710 1_3:+74146326 Msa0140030:CDS
GGCAGGCTGAACGGTATAGT+TGG 0.446424 1_3:+74149492 Msa0140030:CDS
GTTGCAGGAGAAGCATATAA+TGG 0.448760 1_3:-74145410 None:intergenic
CCTGATGACCCCAAGGAACT+TGG 0.451927 1_3:-74146943 None:intergenic
TCAAATATAGTGGGAGCTCT+TGG 0.453330 1_3:-74145623 None:intergenic
CTAATTGGTCAGTCTCCAAC+TGG 0.454732 1_3:+74147045 Msa0140030:CDS
GCTGCAAAGGATTTCCAGTA+AGG 0.455405 1_3:-74150947 None:intergenic
GTCACGCAGGAGAGTGCGGC+AGG 0.456063 1_3:+74149475 Msa0140030:intron
TACCTTGGGATCAAATATAG+TGG 0.457381 1_3:-74145633 None:intergenic
ACAATGTCCATCATAGGATT+GGG 0.458826 1_3:+74148975 Msa0140030:CDS
TGTTGTATCGCCTCTTCCTC+AGG 0.459170 1_3:+74146713 Msa0140030:CDS
CAGAATAATATAATAGTGGC+AGG 0.459304 1_3:+74145446 Msa0140030:CDS
TCCCCTTCTGATAACGGAAC+CGG 0.459445 1_3:-74150066 None:intergenic
GTGGGACAAGTAGTACAATA+AGG 0.459611 1_3:-74145572 None:intergenic
AATGAACACTTGTTAAGGTC+TGG 0.463846 1_3:+74145527 Msa0140030:CDS
GATTCATATTCGAGTCAGCC+TGG 0.465722 1_3:+74147067 Msa0140030:CDS
CTTATGTTTCTCCTGAGTCA+AGG 0.468126 1_3:+74146607 Msa0140030:CDS
CCAAGAATCTTCTACGTCTA+GGG 0.470726 1_3:+74146977 Msa0140030:CDS
TGGTTAAGCATCTTACTGTT+CGG 0.472124 1_3:-74150289 None:intergenic
GCAGGCTGAACGGTATAGTT+GGG 0.472885 1_3:+74149493 Msa0140030:CDS
CTTCTTACTCTATGTGGAGA+AGG 0.474707 1_3:+74146112 Msa0140030:CDS
TTATGTTTCTCCTGAGTCAA+GGG 0.478763 1_3:+74146608 Msa0140030:CDS
AAAATAAAGCTTCACGGCCA+GGG 0.481814 1_3:+74150254 Msa0140030:CDS
ATTCACTACATTGAAGTCCC+TGG 0.481909 1_3:+74151079 Msa0140030:three_prime_UTR
TTGGAGAGCGTCGGAGAGGA+TGG 0.482934 1_3:+74150039 Msa0140030:CDS
CCACGTGTTTCTGACAGAAT+CGG 0.483690 1_3:-74145209 None:intergenic
TATTAACAAATTTGAAGAGA+TGG 0.501093 1_3:-74149589 None:intergenic
GCCATGTTGTTGGTTCATGC+TGG 0.504222 1_3:+74147130 Msa0140030:CDS
CCTTCAGAAGAAACATTTCG+AGG 0.504344 1_3:+74145261 Msa0140030:CDS
ATAGTGGCAGGAAACAAAGT+AGG 0.505404 1_3:+74145458 Msa0140030:CDS
GTATAGTTGGGCTGCAACAA+GGG 0.505727 1_3:+74149505 Msa0140030:CDS
CAAGCATCCCCTTCTGATAA+CGG 0.505912 1_3:-74150072 None:intergenic
CCTCGAAATGTTTCTTCTGA+AGG 0.507653 1_3:-74145261 None:intergenic
GCCAAGAATCTTCTACGTCT+AGG 0.508077 1_3:+74146976 Msa0140030:CDS
ATTTATAATGAAATTTGCCC+AGG 0.509046 1_3:-74147085 None:intergenic
AAGATATATACCTGAGGAAG+AGG 0.513415 1_3:-74146723 None:intergenic
TCATAACGATGCATGGAGCC+AGG 0.515573 1_3:+74147830 Msa0140030:CDS
CCGAATCTTGTCGGACATAC+CGG 0.517871 1_3:+74145341 Msa0140030:CDS
GATGGCGTCTTATGTCTGTC+TGG 0.521052 1_3:-74149571 None:intergenic
TCCCACTATATTTGATCCCA+AGG 0.522705 1_3:+74145631 Msa0140030:CDS
AAACATTAGAGTAGAGCCTA+TGG 0.525053 1_3:-74151055 None:intergenic
GTCAAGGGTTGTTGGTGCTG+GGG 0.527130 1_3:+74146623 Msa0140030:CDS
TTGTTAAGGTCTGGACAACT+AGG 0.527946 1_3:+74145536 Msa0140030:CDS
ACCCTAGTTTCTATCGTAAG+TGG 0.530830 1_3:-74147924 None:intergenic
GGTATAGTTGGGCTGCAACA+AGG 0.533253 1_3:+74149504 Msa0140030:CDS
CCTCGTGGTACGAAGCGGAC+CGG 0.533441 1_3:-74145360 None:intergenic
CACGAATGGCGTCTAAGATA+GGG 0.533961 1_3:-74149924 None:intergenic
CTCGTGTTCAAGGAGTTATA+AGG 0.533997 1_3:+74150387 Msa0140030:CDS
TGTTGTACAACCTTCGCGTG+AGG 0.535852 1_3:-74146029 None:intergenic
AGAGGGTTAACCAATGTTTG+CGG 0.537367 1_3:+74147754 Msa0140030:intron
CAAGAGTCCCAATCCTATGA+TGG 0.538094 1_3:-74148982 None:intergenic
CAGCAAATCAGTACTCTGGC+TGG 0.539258 1_3:+74148912 Msa0140030:intron
AGATTCGGTTGCCTCTCGTA+TGG 0.545158 1_3:-74145326 None:intergenic
GGGTGGTCTTGTACAGAAGA+TGG 0.547676 1_3:+74149996 Msa0140030:CDS
GGCAGGCATCCCGCAAACAT+TGG 0.547918 1_3:-74147764 None:intergenic
TACCACTTACGATAGAAACT+AGG 0.552629 1_3:+74147922 Msa0140030:CDS
GACTCGAATATGAATCCAGT+TGG 0.554607 1_3:-74147060 None:intergenic
CATACCACTATTCTATTCCA+GGG 0.556410 1_3:-74151096 None:intergenic
AGTTAGATTAGTGCGATGGC+AGG 0.557613 1_3:-74147781 None:intergenic
GATGCATGGAGCCAGGATCA+GGG 0.558890 1_3:+74147837 Msa0140030:CDS
AGGGTCATCCTCAGCCATAT+GGG 0.559056 1_3:-74149905 None:intergenic
ATCTGTCACGCAGGAGAGTG+CGG 0.559614 1_3:+74149471 Msa0140030:intron
CAAACAGAATTCAGGTTGCA+TGG 0.560432 1_3:+74150969 Msa0140030:CDS
TCCGGTTCCGTTATCAGAAG+GGG 0.560727 1_3:+74150065 Msa0140030:CDS
AAGTCCCTGGAATAGAATAG+TGG 0.561529 1_3:+74151092 Msa0140030:three_prime_UTR
TCTCTTTATGGTGACGCCAA+AGG 0.562339 1_3:+74145951 Msa0140030:CDS
GTTGTACAACCTTCGCGTGA+GGG 0.564009 1_3:-74146028 None:intergenic
ATTCCGGTTCCGTTATCAGA+AGG 0.567052 1_3:+74150063 Msa0140030:CDS
ACTTCCCACACAAAATAGCT+TGG 0.569266 1_3:-74148945 None:intergenic
GAGAGGCAACCGAATCTTGT+CGG 0.569348 1_3:+74145332 Msa0140030:CDS
TTATCAAACATTGATGCCAT+AGG 0.570396 1_3:+74151039 Msa0140030:CDS
ACTTTCTTCAGGCTCTTGGA+CGG 0.570515 1_3:+74149036 Msa0140030:CDS
GGAGAGTGCGGCAGGCTGAA+CGG 0.571608 1_3:+74149483 Msa0140030:intron
TAGTGGCAGGAAACAAAGTA+GGG 0.572650 1_3:+74145459 Msa0140030:CDS
GGAAGTAAAATTCTCAGTCA+GGG 0.572657 1_3:+74149976 Msa0140030:CDS
ATTGTCATCATAACGATGCA+TGG 0.576364 1_3:+74147823 Msa0140030:CDS
CTTCTGAAGGTAGAATCTTG+AGG 0.578165 1_3:-74145248 None:intergenic
GCACCAACAACCCTTGACTC+AGG 0.578857 1_3:-74146618 None:intergenic
CTTCTTCAATGTCTTTAGCA+CGG 0.579605 1_3:-74150331 None:intergenic
CTGTATTAGTCTCTCACGAA+TGG 0.579807 1_3:-74149938 None:intergenic
AATACAGCAAATCAGTACTC+TGG 0.582109 1_3:+74148908 Msa0140030:intron
GTTCTTCTGGTAAGCGACGA+TGG 0.583542 1_3:-74149340 None:intergenic
TAGGGAGTTATAAAATAACT+AGG 0.588656 1_3:+74151153 Msa0140030:three_prime_UTR
TTCTTCAGGCTCTTGGACGG+AGG 0.589094 1_3:+74149039 Msa0140030:CDS
GCATGAACCAACAACATGGC+CGG 0.590290 1_3:-74147127 None:intergenic
GTGGTGAAGAACTTCTAAGA+TGG 0.591370 1_3:+74150094 Msa0140030:CDS
ACCTTGGGATCAAATATAGT+GGG 0.595230 1_3:-74145632 None:intergenic
ATCCAGAGAAGCCATAGGAA+TGG 0.596327 1_3:-74145303 None:intergenic
TGAGCAACTTTGAAGTAAGT+GGG 0.601206 1_3:-74145590 None:intergenic
CGTCACCATAAAGAGAATTG+TGG 0.602324 1_3:-74145944 None:intergenic
ACCACTTACGATAGAAACTA+GGG 0.602596 1_3:+74147923 Msa0140030:CDS
TTCCGGTTCCGTTATCAGAA+GGG 0.604864 1_3:+74150064 Msa0140030:CDS
GAAGAAACATTTCGAGGACA+CGG 0.606041 1_3:+74145267 Msa0140030:CDS
GCGTGAGGGTTCATAACACC+AGG 0.607336 1_3:-74146014 None:intergenic
AAGATGGTGTTTATTGTGCG+TGG 0.607353 1_3:+74150012 Msa0140030:CDS
ATTCATATTCGAGTCAGCCT+GGG 0.607425 1_3:+74147068 Msa0140030:CDS
CAAGTGTTGTTGCCATTGCG+TGG 0.607532 1_3:-74146272 None:intergenic
AGGGTAGAAATGCAACTTAG+AGG 0.611605 1_3:+74149293 Msa0140030:CDS
GATAAATATAGGCACGAACA+AGG 0.617044 1_3:+74151227 Msa0140030:three_prime_UTR
TATAGTTGGGCTGCAACAAG+GGG 0.617263 1_3:+74149506 Msa0140030:CDS
CTTATAACTCCTTGAACACG+AGG 0.618090 1_3:-74150386 None:intergenic
CGTGGAAAATTGGAGAGCGT+CGG 0.618147 1_3:+74150030 Msa0140030:CDS
TTCGGTCGCTAGTCAAACCC+TGG 0.621807 1_3:-74150271 None:intergenic
TATTCGAATCAACCACGCAA+TGG 0.622474 1_3:+74146260 Msa0140030:CDS
GAACAGTCTTCTGAAAGCAA+AGG 0.627118 1_3:+74150123 Msa0140030:CDS
TTATCAGAAGGGGATGCTTG+TGG 0.631551 1_3:+74150075 Msa0140030:CDS
ATGACCCCAAGGAACTTGGT+AGG 0.631622 1_3:-74146939 None:intergenic
ATGCAGTTAGATTAGTGCGA+TGG 0.633444 1_3:-74147785 None:intergenic
GTTTAAGAAATACACAACAT+CGG 0.635403 1_3:-74146313 None:intergenic
TGTTATGAACCCTCACGCGA+AGG 0.636579 1_3:+74146019 Msa0140030:CDS
TATGGATCCAGAGAAGCCAT+AGG 0.636832 1_3:-74145308 None:intergenic
ACGCGAAGGTTGTACAACAA+TGG 0.638155 1_3:+74146033 Msa0140030:CDS
GGTGATTATGGAGAAGACAA+AGG 0.639866 1_3:-74143322 None:intergenic
TTATCCTACCAAGTTCCTTG+GGG 0.643481 1_3:+74146935 Msa0140030:CDS
AGTAAGATGCTTAACCAATG+TGG 0.646548 1_3:+74150295 Msa0140030:CDS
CCTGATTAAAGAGAAACTCA+AGG 0.649565 1_3:-74143404 None:intergenic
ACCAGCATGAACCAACAACA+TGG 0.649692 1_3:-74147131 None:intergenic
ATTTGCTCCTGATGACCCCA+AGG 0.652468 1_3:-74146950 None:intergenic
GAGTGAAAATGCCTCCACAT+TGG 0.657412 1_3:-74150309 None:intergenic
AAGATGCTTAACCAATGTGG+AGG 0.669911 1_3:+74150298 Msa0140030:CDS
GAGGTCGTGATGTTGAGCAA+TGG 0.676062 1_3:+74149312 Msa0140030:CDS
AAAATTGGAGAGCGTCGGAG+AGG 0.681877 1_3:+74150035 Msa0140030:CDS
GATTATGGAGAAGACAAAGG+TGG 0.683973 1_3:-74143319 None:intergenic
GGAGACTGACCAATTAGCAG+AGG 0.684915 1_3:-74147039 None:intergenic
CCGATTCTGTCAGAAACACG+TGG 0.688656 1_3:+74145209 Msa0140030:CDS
ACTCCTGTTAGCCAAATGAG+TGG 0.689485 1_3:+74145386 Msa0140030:CDS
AGTAAAATTCTCAGTCAGGG+TGG 0.692049 1_3:+74149979 Msa0140030:CDS
CTTCTCTGGATCCATACGAG+AGG 0.705333 1_3:+74145315 Msa0140030:CDS
CCGGTCCGCTTCGTACCACG+AGG 0.716834 1_3:+74145360 Msa0140030:CDS
AGTGGCAGGAAACAAAGTAG+GGG 0.735493 1_3:+74145460 Msa0140030:CDS
ACTTACGATAGAAACTAGGG+TGG 0.738390 1_3:+74147926 Msa0140030:CDS
TTATAACTCCTTGAACACGA+GGG 0.753036 1_3:-74150385 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAACAAAATTAAAG+TGG - chr1_3:74143811-74143830 None:intergenic 10.0%
!!! TTATTGATTAAATTTGAATT+TGG + chr1_3:74143828-74143847 Msa0140030:intron 10.0%
!!! TTTTATTTTATTTCTAAGTA+AGG - chr1_3:74146200-74146219 None:intergenic 10.0%
!! CATTTAATATTATAAAAAAG+GGG + chr1_3:74148753-74148772 Msa0140030:intron 10.0%
!!! ACTATTATATTATTCTGAAA+AGG - chr1_3:74145443-74145462 None:intergenic 15.0%
!!! TTTTCAGAATAATATAATAG+TGG + chr1_3:74145442-74145461 Msa0140030:CDS 15.0%
!! AAATAAAAGTCTATTACTTT+AGG - chr1_3:74145667-74145686 None:intergenic 15.0%
!! ACAAGAAAATTCAAATAATT+TGG + chr1_3:74148293-74148312 Msa0140030:intron 15.0%
!! GTATATTTGAATAAAAATTG+TGG + chr1_3:74148455-74148474 Msa0140030:intron 15.0%
!! ATGTCTATTTGAAAATAATT+TGG + chr1_3:74148490-74148509 Msa0140030:intron 15.0%
!!! TTTGAAAATAATTTGGATTT+TGG + chr1_3:74148497-74148516 Msa0140030:intron 15.0%
!!! GTTTAAAATAGTAGTTAATA+AGG + chr1_3:74148575-74148594 Msa0140030:intron 15.0%
!!! AAAATCAATTTTTGTTATCA+CGG - chr1_3:74149139-74149158 None:intergenic 15.0%
!!! TATCAAGATTTTAAAATGAA+AGG - chr1_3:74149248-74149267 None:intergenic 15.0%
!!! AAATAATGGATTACTTATTA+TGG + chr1_3:74149429-74149448 Msa0140030:intron 15.0%
!!! TCAAACTTGTTTAATATAAT+TGG - chr1_3:74149819-74149838 None:intergenic 15.0%
!!! TTTTTATAGAATAAGCTTAT+AGG + chr1_3:74151134-74151153 Msa0140030:three_prime_UTR 15.0%
!!! TTTTATAGAATAAGCTTATA+GGG + chr1_3:74151135-74151154 Msa0140030:three_prime_UTR 15.0%
!! TTGATTAAATTTGAATTTGG+AGG + chr1_3:74143831-74143850 Msa0140030:intron 20.0%
!!! TATTTTTTGTATTAACACTC+TGG - chr1_3:74144091-74144110 None:intergenic 20.0%
!!! AATTTTGAATTACTAACATG+TGG + chr1_3:74144113-74144132 Msa0140030:intron 20.0%
!!! ATTTTGAATTACTAACATGT+GGG + chr1_3:74144114-74144133 Msa0140030:intron 20.0%
!! CGAAAAAAAAATAACTTTGT+TGG - chr1_3:74144273-74144292 None:intergenic 20.0%
!!! AAATTGATTTAAGGGTATTT+AGG + chr1_3:74144386-74144405 Msa0140030:intron 20.0%
!! ATTGCATTTCAAAAATTGTA+TGG + chr1_3:74144625-74144644 Msa0140030:intron 20.0%
!!! AAAAATTGTATGGTTAGTTT+AGG + chr1_3:74144635-74144654 Msa0140030:intron 20.0%
!!! AATTCAGATCAACTTTAAAA+GGG - chr1_3:74145078-74145097 None:intergenic 20.0%
!! AAATTCAGATCAACTTTAAA+AGG - chr1_3:74145079-74145098 None:intergenic 20.0%
!!! ATAAAAATGAACACTTGTTA+AGG + chr1_3:74145522-74145541 Msa0140030:CDS 20.0%
!! TAGAGTAAGAAGAAAAATAA+CGG - chr1_3:74146104-74146123 None:intergenic 20.0%
!!! TTTATCAGTACTCAAATTTT+TGG + chr1_3:74146352-74146371 Msa0140030:intron 20.0%
!! TAGAAACATTTACATTCAAA+TGG - chr1_3:74146418-74146437 None:intergenic 20.0%
!!! TTGAATGTAAATGTTTCTAA+TGG + chr1_3:74146419-74146438 Msa0140030:intron 20.0%
!!! TAATTAACAGCTATTTTCTT+GGG - chr1_3:74146663-74146682 None:intergenic 20.0%
!! AATCCACATACTATTTATTA+AGG - chr1_3:74146801-74146820 None:intergenic 20.0%
!!! CAAAATGTGAAATTTTAATG+AGG - chr1_3:74147226-74147245 None:intergenic 20.0%
!! TTTAATGCTTCTGATTTATA+AGG + chr1_3:74147334-74147353 Msa0140030:intron 20.0%
!! TTAATTCAGTAAATGAATGT+CGG + chr1_3:74147687-74147706 Msa0140030:intron 20.0%
!! ATTTGTATAATTACAACTGA+GGG - chr1_3:74148016-74148035 None:intergenic 20.0%
!! AATTTGTATAATTACAACTG+AGG - chr1_3:74148017-74148036 None:intergenic 20.0%
!! TGAAGATAAACAATGTAAAT+TGG + chr1_3:74148151-74148170 Msa0140030:intron 20.0%
!!! AAAATAATTTGGATTTTGGA+TGG + chr1_3:74148501-74148520 Msa0140030:intron 20.0%
!! ATTTCAACATTTGAAAATCA+TGG + chr1_3:74148544-74148563 Msa0140030:intron 20.0%
!! AAAATGGTATAAATGTGATT+TGG - chr1_3:74148731-74148750 None:intergenic 20.0%
!! TTTATGTTTACGTTAATTGT+TGG + chr1_3:74149081-74149100 Msa0140030:intron 20.0%
!!! GATTTTGAACAAATCATTTT+TGG + chr1_3:74149153-74149172 Msa0140030:intron 20.0%
!!! ATTATTTGATAGATGTGTTT+TGG - chr1_3:74149416-74149435 None:intergenic 20.0%
!! AAAACACATCTATCAAATAA+TGG + chr1_3:74149415-74149434 Msa0140030:intron 20.0%
!! TATTAACAAATTTGAAGAGA+TGG - chr1_3:74149592-74149611 None:intergenic 20.0%
!!! TTAAGTCGATTTTATTTATC+TGG + chr1_3:74149647-74149666 Msa0140030:intron 20.0%
!! AATGCAATTGAATCATAAAA+GGG - chr1_3:74150478-74150497 None:intergenic 20.0%
!! AAATGCAATTGAATCATAAA+AGG - chr1_3:74150479-74150498 None:intergenic 20.0%
!! TTTATGATTCAATTGCATTT+CGG + chr1_3:74150479-74150498 Msa0140030:intron 20.0%
!!! TGGTTTTGATAATAGATATT+AGG - chr1_3:74150876-74150895 None:intergenic 20.0%
!! AAATTCACCATGATAAATAT+AGG + chr1_3:74151216-74151235 Msa0140030:three_prime_UTR 20.0%
!!! CCATGTATTAATTTTAACTA+AGG - chr1_3:74151328-74151347 None:intergenic 20.0%
!! CCTTAGTTAAAATTAATACA+TGG + chr1_3:74151325-74151344 Msa0140030:intron 20.0%
!!! TTTTAGGAAAATGGTGATTA+TGG - chr1_3:74143337-74143356 None:intergenic 25.0%
!!! AGTATGCATTTTTAGGAAAA+TGG - chr1_3:74143346-74143365 None:intergenic 25.0%
!! ACGTTAAAGTATGCATTTTT+AGG - chr1_3:74143353-74143372 None:intergenic 25.0%
! TTTCATTCTTTACTCTTTCT+GGG + chr1_3:74143427-74143446 Msa0140030:intron 25.0%
! AAACAACAATATCACACAAA+AGG - chr1_3:74143741-74143760 None:intergenic 25.0%
!!! ATTAGTTTTTCTCTTTTGTC+TGG + chr1_3:74143905-74143924 Msa0140030:intron 25.0%
!!! TTAGTTTTTCTCTTTTGTCT+GGG + chr1_3:74143906-74143925 Msa0140030:intron 25.0%
! TGAATTATGACACTTGTTTA+AGG + chr1_3:74144187-74144206 Msa0140030:intron 25.0%
! TAGACAAAAAAAGTCATGTT+TGG - chr1_3:74144487-74144506 None:intergenic 25.0%
! GACATAAAAAGATATACAAG+TGG - chr1_3:74144724-74144743 None:intergenic 25.0%
! CAATTAAGGATGAATCATTT+AGG - chr1_3:74144994-74145013 None:intergenic 25.0%
!! ATTCAGATCAACTTTAAAAG+GGG - chr1_3:74145077-74145096 None:intergenic 25.0%
!!! TCATTTTAAAATTGCTGAGA+TGG + chr1_3:74145106-74145125 Msa0140030:intron 25.0%
!! GAAAAGTTTTCTACATTTGA+TGG + chr1_3:74145494-74145513 Msa0140030:CDS 25.0%
!!! AGCTTTACTTTTGTTTTCAA+TGG + chr1_3:74145805-74145824 Msa0140030:intron 25.0%
!! ATTTTTCTTCTTACTCTATG+TGG + chr1_3:74146106-74146125 Msa0140030:CDS 25.0%
! AAAGTAATGCAAAATGATGT+TGG - chr1_3:74146174-74146193 None:intergenic 25.0%
! GTTTAAGAAATACACAACAT+CGG - chr1_3:74146316-74146335 None:intergenic 25.0%
! TCTATCATTCTATCAATAGA+TGG - chr1_3:74146395-74146414 None:intergenic 25.0%
!!! AATTTCCTTTTTTGCAGTTT+AGG + chr1_3:74146580-74146599 Msa0140030:intron 25.0%
!!! GTAATTAACAGCTATTTTCT+TGG - chr1_3:74146664-74146683 None:intergenic 25.0%
! ATGCCTTAATAAATAGTATG+TGG + chr1_3:74146795-74146814 Msa0140030:intron 25.0%
! ATCTGGGAATATATTGTATA+AGG - chr1_3:74147005-74147024 None:intergenic 25.0%
! ATTTATAATGAAATTTGCCC+AGG - chr1_3:74147088-74147107 None:intergenic 25.0%
!! TGTAATTTTTATTCACCTGT+AGG - chr1_3:74147167-74147186 None:intergenic 25.0%
!!! GTTCTTTTTATTTGAATGCA+AGG - chr1_3:74147262-74147281 None:intergenic 25.0%
! TCTGATTTATAAGGTTACAT+CGG + chr1_3:74147343-74147362 Msa0140030:intron 25.0%
! AATAAGCTCAAAACAACTTA+TGG - chr1_3:74147452-74147471 None:intergenic 25.0%
! TGCAACATATTATCATACTA+TGG - chr1_3:74147589-74147608 None:intergenic 25.0%
! TAATTCAGTAAATGAATGTC+GGG + chr1_3:74147688-74147707 Msa0140030:intron 25.0%
! TGAAGAATTCAAACAATCTT+TGG - chr1_3:74147865-74147884 None:intergenic 25.0%
! TTTAAGCTGTTTATCTTCAT+TGG - chr1_3:74148093-74148112 None:intergenic 25.0%
!!! TGTGTTATTTTGACACAAAA+TGG + chr1_3:74148269-74148288 Msa0140030:intron 25.0%
! TTTAACACAGTTCAAATACA+TGG + chr1_3:74148319-74148338 Msa0140030:intron 25.0%
!! GGTTAAATACATTTTGTAGA+TGG + chr1_3:74148340-74148359 Msa0140030:intron 25.0%
! AAATATACATCTGAAAATCG+TGG - chr1_3:74148443-74148462 None:intergenic 25.0%
! GATGGTTAATGAATTTAACA+AGG - chr1_3:74148625-74148644 None:intergenic 25.0%
! TGCATATGAAAATTAAAACG+AGG - chr1_3:74148702-74148721 None:intergenic 25.0%
!! AACCATTTATTTGCCTTTTA+GGG - chr1_3:74148853-74148872 None:intergenic 25.0%
!! AAACCATTTATTTGCCTTTT+AGG - chr1_3:74148854-74148873 None:intergenic 25.0%
! ACTTATTATGGTACAAATGA+TGG + chr1_3:74149441-74149460 Msa0140030:intron 25.0%
!! TTTTCTCATTCAACTCTTTA+AGG - chr1_3:74149733-74149752 None:intergenic 25.0%
! GGTAAAAAAATAAAGCTTCA+CGG + chr1_3:74150248-74150267 Msa0140030:CDS 25.0%
! AGAATGTGTTTATAAGTGAT+GGG - chr1_3:74150565-74150584 None:intergenic 25.0%
!!! ACCTTATCTCTTTTTTAAGT+GGG + chr1_3:74150588-74150607 Msa0140030:intron 25.0%
! TATGACAATATGTATTCAAG+TGG - chr1_3:74150779-74150798 None:intergenic 25.0%
! ATATCTTATCTCATCCAATA+TGG + chr1_3:74150796-74150815 Msa0140030:intron 25.0%
! AATTGTTATGAGTTCCATAT+TGG - chr1_3:74150813-74150832 None:intergenic 25.0%
! AAATTATTATGTCAGAGACA+TGG - chr1_3:74150896-74150915 None:intergenic 25.0%
! ATGTCTCTGACATAATAATT+TGG + chr1_3:74150895-74150914 Msa0140030:intron 25.0%
!!! TGTTTGATAATCATTTTGTG+CGG - chr1_3:74151029-74151048 None:intergenic 25.0%
! TAGGGAGTTATAAAATAACT+AGG + chr1_3:74151153-74151172 Msa0140030:three_prime_UTR 25.0%
ATGCATACTTTAACGTGAAT+TGG + chr1_3:74143357-74143376 Msa0140030:five_prime_UTR 30.0%
! AATTGGTTCAAAATAGCTTC+TGG + chr1_3:74143374-74143393 Msa0140030:five_prime_UTR 30.0%
! ATTGGTTCAAAATAGCTTCT+GGG + chr1_3:74143375-74143394 Msa0140030:five_prime_UTR 30.0%
GTTTCATTCTTTACTCTTTC+TGG + chr1_3:74143426-74143445 Msa0140030:intron 30.0%
! ATTTGTTTGGAACTTGTATC+CGG + chr1_3:74143539-74143558 Msa0140030:intron 30.0%
ATGAGAATTGCAACTAAGTA+AGG - chr1_3:74143686-74143705 None:intergenic 30.0%
TACTTAGTTGCAATTCTCAT+AGG + chr1_3:74143686-74143705 Msa0140030:intron 30.0%
! ATTCAAACTTGAGTTTTCCT+GGG - chr1_3:74143989-74144008 None:intergenic 30.0%
TGATTGAAATTCGGATTATC+AGG + chr1_3:74144049-74144068 Msa0140030:intron 30.0%
!!! CACTCTGGTTTTTAGAAAAA+AGG - chr1_3:74144076-74144095 None:intergenic 30.0%
AAGTAGTATATGTTGAGTGT+TGG + chr1_3:74144519-74144538 Msa0140030:intron 30.0%
!!! CACATATATGCACTTTTTCA+TGG - chr1_3:74144595-74144614 None:intergenic 30.0%
! GAAAGTGTAATTGATACGTT+TGG + chr1_3:74144663-74144682 Msa0140030:intron 30.0%
!!! ATCTTAAACCTTTTGAAGCA+TGG - chr1_3:74144696-74144715 None:intergenic 30.0%
TTATTAACCCTACGATTCTT+AGG + chr1_3:74144891-74144910 Msa0140030:intron 30.0%
ATGAATCATTTAGGAAAACC+CGG - chr1_3:74144985-74145004 None:intergenic 30.0%
TGGTTAATGAGCTTCAATTA+AGG - chr1_3:74145008-74145027 None:intergenic 30.0%
!! TCTGTTTTTCAGAATCTTGA+AGG + chr1_3:74145155-74145174 Msa0140030:intron 30.0%
CAGAATAATATAATAGTGGC+AGG + chr1_3:74145446-74145465 Msa0140030:CDS 30.0%
TTTAGGAAGAAAGATACCTT+GGG - chr1_3:74145650-74145669 None:intergenic 30.0%
GCACAACTATATGACAAAAA+AGG - chr1_3:74145851-74145870 None:intergenic 30.0%
! AAGTTTTCTTCCATATCCTT+TGG - chr1_3:74145970-74145989 None:intergenic 30.0%
! ACAACAATGGAACAAGTTTT+TGG + chr1_3:74146046-74146065 Msa0140030:CDS 30.0%
TAATGCAAAATGATGTTGGA+AGG - chr1_3:74146170-74146189 None:intergenic 30.0%
TTTCTTAAACATTCTTCTCC+AGG + chr1_3:74146326-74146345 Msa0140030:CDS 30.0%
!! TTGAGTACTGATAAATTACC+TGG - chr1_3:74146347-74146366 None:intergenic 30.0%
TTTCTTCCTATAAGCAAAGA+GGG - chr1_3:74146468-74146487 None:intergenic 30.0%
! TTTTCTTCCTATAAGCAAAG+AGG - chr1_3:74146469-74146488 None:intergenic 30.0%
! TCTTGGTTATTGTGTTTTCA+TGG + chr1_3:74146534-74146553 Msa0140030:intron 30.0%
TTGACGATATGTATTTGACA+CGG + chr1_3:74146832-74146851 Msa0140030:intron 30.0%
TAGTCTGTGAAAAAGATTAC+AGG + chr1_3:74146869-74146888 Msa0140030:intron 30.0%
GGCAAAAATCTGAATAATCT+GGG - chr1_3:74147021-74147040 None:intergenic 30.0%
AGGCAAAAATCTGAATAATC+TGG - chr1_3:74147022-74147041 None:intergenic 30.0%
! CTTCTGATTTTTATGCTATC+CGG + chr1_3:74147108-74147127 Msa0140030:CDS 30.0%
TTTCATTATGTGAAGATGCA+GGG - chr1_3:74147284-74147303 None:intergenic 30.0%
CTGATTTATAAGGTTACATC+GGG + chr1_3:74147344-74147363 Msa0140030:intron 30.0%
TCAAATAAGTCTTTCCAAAC+AGG - chr1_3:74147370-74147389 None:intergenic 30.0%
TTGGATAAACAACTTGACAA+GGG - chr1_3:74147560-74147579 None:intergenic 30.0%
TTTGGATAAACAACTTGACA+AGG - chr1_3:74147561-74147580 None:intergenic 30.0%
! TCAAGTTGTTTATCCAAACA+GGG + chr1_3:74147563-74147582 Msa0140030:intron 30.0%
! ATTTTATCTCTACTTCCAGA+GGG + chr1_3:74147737-74147756 Msa0140030:intron 30.0%
!!! TCATCTGATGCTTTTTCTTA+TGG + chr1_3:74147882-74147901 Msa0140030:CDS 30.0%
! AATATGTGTATGCACTCTTT+TGG + chr1_3:74147955-74147974 Msa0140030:CDS 30.0%
! ATATGTGTATGCACTCTTTT+GGG + chr1_3:74147956-74147975 Msa0140030:CDS 30.0%
TAAATTGCAAAATGCATACC+TGG - chr1_3:74147986-74148005 None:intergenic 30.0%
TATTCGCAGCTCAATATTAT+AGG - chr1_3:74148044-74148063 None:intergenic 30.0%
TAACGACACAACATAACAAA+AGG + chr1_3:74148122-74148141 Msa0140030:intron 30.0%
AACGACACAACATAACAAAA+GGG + chr1_3:74148123-74148142 Msa0140030:intron 30.0%
TCATAAGTCATAACCAGTTA+TGG + chr1_3:74148210-74148229 Msa0140030:intron 30.0%
! TACATTTTGTAGATGGTTAG+TGG + chr1_3:74148347-74148366 Msa0140030:intron 30.0%
CGTTAATTGTATTATGTGCA+TGG - chr1_3:74148400-74148419 None:intergenic 30.0%
TAGTAGTTAATAAGGTTGAG+TGG + chr1_3:74148583-74148602 Msa0140030:intron 30.0%
ATGTATGTAATTACGTTCAG+TGG - chr1_3:74148647-74148666 None:intergenic 30.0%
AACGAGGAAAACAATATGAT+TGG - chr1_3:74148686-74148705 None:intergenic 30.0%
TTATAAAAAAGGGGAAGACA+AGG + chr1_3:74148762-74148781 Msa0140030:intron 30.0%
TGTTGTCTAATATCATGTCA+AGG + chr1_3:74148812-74148831 Msa0140030:intron 30.0%
GTTGTCTAATATCATGTCAA+GGG + chr1_3:74148813-74148832 Msa0140030:intron 30.0%
TAACTTGAATCAACCCTAAA+AGG + chr1_3:74148837-74148856 Msa0140030:intron 30.0%
AACCCTAAAAGGCAAATAAA+TGG + chr1_3:74148848-74148867 Msa0140030:intron 30.0%
AAAGATCACATGCGTATAAT+TGG - chr1_3:74148888-74148907 None:intergenic 30.0%
AAACATACAGAACTTTCTTC+AGG + chr1_3:74149025-74149044 Msa0140030:CDS 30.0%
!!! TCATACCTTTTAAGTTCTTC+TGG - chr1_3:74149356-74149375 None:intergenic 30.0%
! GAAAACTAGTTTCAAGACAA+AGG + chr1_3:74149748-74149767 Msa0140030:intron 30.0%
TGATGATCTAACATTTCTAC+AGG + chr1_3:74149870-74149889 Msa0140030:intron 30.0%
ATACAGACGACATACATTAA+AGG + chr1_3:74149955-74149974 Msa0140030:CDS 30.0%
GTGTTCTTAACCTTATAAGA+CGG - chr1_3:74150543-74150562 None:intergenic 30.0%
GAGAATGTGTTTATAAGTGA+TGG - chr1_3:74150566-74150585 None:intergenic 30.0%
!!! GACCTTATCTCTTTTTTAAG+TGG + chr1_3:74150587-74150606 Msa0140030:intron 30.0%
TCCCACTTAAAAAAGAGATA+AGG - chr1_3:74150592-74150611 None:intergenic 30.0%
!! CTCAAATTCTAAGATGGTAT+CGG - chr1_3:74150697-74150716 None:intergenic 30.0%
! ACCATCTTAGAATTTGAGTT+AGG + chr1_3:74150699-74150718 Msa0140030:intron 30.0%
!!! AGTGTTTTAATGGTTGAGTT+AGG - chr1_3:74150725-74150744 None:intergenic 30.0%
TAACTCAACCATTAAAACAC+TGG + chr1_3:74150724-74150743 Msa0140030:intron 30.0%
ACAATATGTATTCAAGTGGT+GGG - chr1_3:74150775-74150794 None:intergenic 30.0%
GCATGTAAATAGCATACTTA+TGG - chr1_3:74150854-74150873 None:intergenic 30.0%
!! TGGTTGTTTTGTCTTATGTT+AGG + chr1_3:74150915-74150934 Msa0140030:intron 30.0%
TTATCAAACATTGATGCCAT+AGG + chr1_3:74151039-74151058 Msa0140030:CDS 30.0%
TAGAATAGTGGTATGCTTAT+AGG + chr1_3:74151104-74151123 Msa0140030:three_prime_UTR 30.0%
AGAATAGTGGTATGCTTATA+GGG + chr1_3:74151105-74151124 Msa0140030:three_prime_UTR 30.0%
!! ACAAAGGTGGACTGAAAAAA+TGG - chr1_3:74143309-74143328 None:intergenic 35.0%
CCTGATTAAAGAGAAACTCA+AGG - chr1_3:74143407-74143426 None:intergenic 35.0%
CCTTGAGTTTCTCTTTAATC+AGG + chr1_3:74143404-74143423 Msa0140030:five_prime_UTR 35.0%
CTGGTATGAACTAAAGGATA+AGG - chr1_3:74143953-74143972 None:intergenic 35.0%
! TTCAAACTTGAGTTTTCCTG+GGG - chr1_3:74143988-74144007 None:intergenic 35.0%
! GATTCAAACTTGAGTTTTCC+TGG - chr1_3:74143990-74144009 None:intergenic 35.0%
GTCGTCTTCTGATTGAAATT+CGG + chr1_3:74144040-74144059 Msa0140030:intron 35.0%
ACTCGAGCATTTATGTATGT+CGG + chr1_3:74144156-74144175 Msa0140030:intron 35.0%
AAAAAGCTTGATTGTCAGGT+GGG + chr1_3:74144212-74144231 Msa0140030:intron 35.0%
GATAATCTGTTAGACACACA+AGG - chr1_3:74144251-74144270 None:intergenic 35.0%
ACGAAATATCTACTGCAATG+TGG - chr1_3:74144332-74144351 None:intergenic 35.0%
CTGAAGATTTCGTTTACAGA+AGG + chr1_3:74144413-74144432 Msa0140030:intron 35.0%
ACAAATACTGATGCTTGTAG+AGG + chr1_3:74144556-74144575 Msa0140030:intron 35.0%
! GTTTTCTTCCATGCTTCAAA+AGG + chr1_3:74144685-74144704 Msa0140030:intron 35.0%
ATCATTCTACATTTGACTGC+CGG + chr1_3:74144775-74144794 Msa0140030:intron 35.0%
GATCTTTGTTCTTATCTAGC+CGG - chr1_3:74144797-74144816 None:intergenic 35.0%
! GTGATGCTTTGAATTTCATC+TGG + chr1_3:74144823-74144842 Msa0140030:intron 35.0%
GATTTCTCCTAAGAATCGTA+GGG - chr1_3:74144901-74144920 None:intergenic 35.0%
TACGATTCTTAGGAGAAATC+CGG + chr1_3:74144901-74144920 Msa0140030:intron 35.0%
! ATCCTGACTTGAACAATCAT+TGG - chr1_3:74144956-74144975 None:intergenic 35.0%
TGAATCATTTAGGAAAACCC+GGG - chr1_3:74144984-74145003 None:intergenic 35.0%
CAGTACATAACCAAGTGATT+TGG - chr1_3:74145037-74145056 None:intergenic 35.0%
TGCTTCAATTTCCATTCCTA+TGG + chr1_3:74145292-74145311 Msa0140030:CDS 35.0%
!! CATATAATGGACCACTCATT+TGG - chr1_3:74145400-74145419 None:intergenic 35.0%
!! GTTTTCTACATTTGATGGCA+CGG + chr1_3:74145499-74145518 Msa0140030:CDS 35.0%
! AATGAACACTTGTTAAGGTC+TGG + chr1_3:74145527-74145546 Msa0140030:CDS 35.0%
!! TGAGCAACTTTGAAGTAAGT+GGG - chr1_3:74145593-74145612 None:intergenic 35.0%
ACCTTGGGATCAAATATAGT+GGG - chr1_3:74145635-74145654 None:intergenic 35.0%
TACCTTGGGATCAAATATAG+TGG - chr1_3:74145636-74145655 None:intergenic 35.0%
! CTTTAGGAAGAAAGATACCT+TGG - chr1_3:74145651-74145670 None:intergenic 35.0%
CAGTTCCACAATTCTCTTTA+TGG + chr1_3:74145939-74145958 Msa0140030:intron 35.0%
!!! GTTTTTGGCCATATTTTGCT+TGG + chr1_3:74146061-74146080 Msa0140030:CDS 35.0%
AATTGCGACCAAGCAAAATA+TGG - chr1_3:74146072-74146091 None:intergenic 35.0%
! TTTTCTCATTCGTTTTCTGC+AGG + chr1_3:74146227-74146246 Msa0140030:intron 35.0%
CGTGTCTTGAATCTTAAACA+TGG + chr1_3:74146496-74146515 Msa0140030:intron 35.0%
!!! TCCTTTTTTGCAGTTTAGGT+TGG + chr1_3:74146584-74146603 Msa0140030:intron 35.0%
TTATGTTTCTCCTGAGTCAA+GGG + chr1_3:74146608-74146627 Msa0140030:CDS 35.0%
!! TAACAGCTATTTTCTTGGGA+TGG - chr1_3:74146659-74146678 None:intergenic 35.0%
AAGATATATACCTGAGGAAG+AGG - chr1_3:74146726-74146745 None:intergenic 35.0%
GATAGGAAGATATATACCTG+AGG - chr1_3:74146732-74146751 None:intergenic 35.0%
AACAAACAACATGGAGAGAT+AGG - chr1_3:74146749-74146768 None:intergenic 35.0%
TGTATTTGACACGGAAGAAA+AGG + chr1_3:74146841-74146860 Msa0140030:intron 35.0%
GTATTTGACACGGAAGAAAA+GGG + chr1_3:74146842-74146861 Msa0140030:intron 35.0%
ATTTATCCTACCAAGTTCCT+TGG + chr1_3:74146933-74146952 Msa0140030:CDS 35.0%
TTTATCCTACCAAGTTCCTT+GGG + chr1_3:74146934-74146953 Msa0140030:CDS 35.0%
! AGATTTTTGCCTCTGCTAAT+TGG + chr1_3:74147030-74147049 Msa0140030:CDS 35.0%
CTTTCATTATGTGAAGATGC+AGG - chr1_3:74147285-74147304 None:intergenic 35.0%
CTGCATCTTCACATAATGAA+AGG + chr1_3:74147283-74147302 Msa0140030:intron 35.0%
! GTCAAGTTGTTTATCCAAAC+AGG + chr1_3:74147562-74147581 Msa0140030:intron 35.0%
! CATTTTATCTCTACTTCCAG+AGG + chr1_3:74147736-74147755 Msa0140030:intron 35.0%
ATTGTCATCATAACGATGCA+TGG + chr1_3:74147823-74147842 Msa0140030:CDS 35.0%
TACCACTTACGATAGAAACT+AGG + chr1_3:74147922-74147941 Msa0140030:CDS 35.0%
ACCACTTACGATAGAAACTA+GGG + chr1_3:74147923-74147942 Msa0140030:CDS 35.0%
! TATGTGTATGCACTCTTTTG+GGG + chr1_3:74147957-74147976 Msa0140030:CDS 35.0%
AAGCTGTTTATCTTCATTGG+AGG - chr1_3:74148090-74148109 None:intergenic 35.0%
ACGACACAACATAACAAAAG+GGG + chr1_3:74148124-74148143 Msa0140030:intron 35.0%
! GATGGTTAGTGGATATAACA+AGG + chr1_3:74148358-74148377 Msa0140030:intron 35.0%
! TGGATTTTGGATGGTTATAG+TGG + chr1_3:74148510-74148529 Msa0140030:intron 35.0%
AGTTAATAAGGTTGAGTGGA+TGG + chr1_3:74148587-74148606 Msa0140030:intron 35.0%
ATGTAATTACGTTCAGTGGA+TGG - chr1_3:74148643-74148662 None:intergenic 35.0%
AATACAGCAAATCAGTACTC+TGG + chr1_3:74148908-74148927 Msa0140030:intron 35.0%
!! AACAACCAAGCTATTTTGTG+TGG + chr1_3:74148940-74148959 Msa0140030:CDS 35.0%
!! ACAACCAAGCTATTTTGTGT+GGG + chr1_3:74148941-74148960 Msa0140030:CDS 35.0%
CTCTTTACAATGTCCATCAT+AGG + chr1_3:74148969-74148988 Msa0140030:CDS 35.0%
TACAATGTCCATCATAGGAT+TGG + chr1_3:74148974-74148993 Msa0140030:CDS 35.0%
ACAATGTCCATCATAGGATT+GGG + chr1_3:74148975-74148994 Msa0140030:CDS 35.0%
! AAGAGAATGACTTGTGTGTT+TGG - chr1_3:74149196-74149215 None:intergenic 35.0%
! TTTTGTTCCATCCTACTTAC+AGG + chr1_3:74149270-74149289 Msa0140030:intron 35.0%
GCTTACCAGAAGAACTTAAA+AGG + chr1_3:74149348-74149367 Msa0140030:CDS 35.0%
! TTTTCCAGAACCATTTTCTC+AGG - chr1_3:74149536-74149555 None:intergenic 35.0%
!!! GGTTCGAATTTTTTCCCATA+TGG + chr1_3:74149891-74149910 Msa0140030:intron 35.0%
!!! AATTTTTTCCCATATGGCTG+AGG + chr1_3:74149897-74149916 Msa0140030:CDS 35.0%
AGGAAGTAAAATTCTCAGTC+AGG + chr1_3:74149975-74149994 Msa0140030:CDS 35.0%
GGAAGTAAAATTCTCAGTCA+GGG + chr1_3:74149976-74149995 Msa0140030:CDS 35.0%
GTTTATTGTGCGTGGAAAAT+TGG + chr1_3:74150020-74150039 Msa0140030:CDS 35.0%
! CATCGATTAAACATGGTTTG+AGG - chr1_3:74150211-74150230 None:intergenic 35.0%
CAAACCATGTTTAATCGATG+TGG + chr1_3:74150211-74150230 Msa0140030:intron 35.0%
! GAAACCACATCGATTAAACA+TGG - chr1_3:74150218-74150237 None:intergenic 35.0%
TGGTTAAGCATCTTACTGTT+CGG - chr1_3:74150292-74150311 None:intergenic 35.0%
AGTAAGATGCTTAACCAATG+TGG + chr1_3:74150295-74150314 Msa0140030:CDS 35.0%
CTTCTTCAATGTCTTTAGCA+CGG - chr1_3:74150334-74150353 None:intergenic 35.0%
! CTCTTTTCGCAAGATATTTG+CGG + chr1_3:74150360-74150379 Msa0140030:CDS 35.0%
TTATAACTCCTTGAACACGA+GGG - chr1_3:74150388-74150407 None:intergenic 35.0%
TATTGACACAAAGACAGAAG+GGG - chr1_3:74150439-74150458 None:intergenic 35.0%
! GTATTGACACAAAGACAGAA+GGG - chr1_3:74150440-74150459 None:intergenic 35.0%
!! AGTATTGACACAAAGACAGA+AGG - chr1_3:74150441-74150460 None:intergenic 35.0%
!!! TCTCTTTTTTAAGTGGGACT+TGG + chr1_3:74150594-74150613 Msa0140030:intron 35.0%
GGCGCATGAATATAAATGAT+GGG + chr1_3:74150650-74150669 Msa0140030:intron 35.0%
! GCATGAATATAAATGATGGG+TGG + chr1_3:74150653-74150672 Msa0140030:intron 35.0%
! GCCTAACTCAAATTCTAAGA+TGG - chr1_3:74150703-74150722 None:intergenic 35.0%
!! CTATCAAGCCAGTGTTTTAA+TGG - chr1_3:74150735-74150754 None:intergenic 35.0%
!! CATTAAAACACTGGCTTGAT+AGG + chr1_3:74150733-74150752 Msa0140030:intron 35.0%
GACAATATGTATTCAAGTGG+TGG - chr1_3:74150776-74150795 None:intergenic 35.0%
TTAGGTATGAATCACCTTAC+TGG + chr1_3:74150933-74150952 Msa0140030:intron 35.0%
AAACATTAGAGTAGAGCCTA+TGG - chr1_3:74151058-74151077 None:intergenic 35.0%
CATACCACTATTCTATTCCA+GGG - chr1_3:74151099-74151118 None:intergenic 35.0%
GTTCGTGCCTATATTTATCA+TGG - chr1_3:74151226-74151245 None:intergenic 35.0%
GATAAATATAGGCACGAACA+AGG + chr1_3:74151227-74151246 Msa0140030:three_prime_UTR 35.0%
GATTATGGAGAAGACAAAGG+TGG - chr1_3:74143322-74143341 None:intergenic 40.0%
GGTGATTATGGAGAAGACAA+AGG - chr1_3:74143325-74143344 None:intergenic 40.0%
CCATTGGTCAACAGATTAGT+GGG - chr1_3:74143573-74143592 None:intergenic 40.0%
TCCATTGGTCAACAGATTAG+TGG - chr1_3:74143574-74143593 None:intergenic 40.0%
GACCAATGGAGCTCATTTAA+AGG + chr1_3:74143584-74143603 Msa0140030:intron 40.0%
TGCCTTTAAATGAGCTCCAT+TGG - chr1_3:74143589-74143608 None:intergenic 40.0%
ACTAAAGGATAAGGAGTTCG+AGG - chr1_3:74143944-74143963 None:intergenic 40.0%
GCTCAACTGGTATGAACTAA+AGG - chr1_3:74143959-74143978 None:intergenic 40.0%
TGTCAATAACTGCTCTAGTC+AGG - chr1_3:74144012-74144031 None:intergenic 40.0%
!! AACATGTGGGTTAGACCTAA+TGG + chr1_3:74144127-74144146 Msa0140030:intron 40.0%
! TGGGTTAGACCTAATGGTAA+GGG + chr1_3:74144133-74144152 Msa0140030:intron 40.0%
GCATTTATGTATGTCGGAAG+AGG + chr1_3:74144162-74144181 Msa0140030:intron 40.0%
GGAGAAAAAGCTTGATTGTC+AGG + chr1_3:74144208-74144227 Msa0140030:intron 40.0%
GAAAAAGCTTGATTGTCAGG+TGG + chr1_3:74144211-74144230 Msa0140030:intron 40.0%
!! AGACACACAAGGTGGATTAT+AGG - chr1_3:74144240-74144259 None:intergenic 40.0%
AATCTGTTAGACACACAAGG+TGG - chr1_3:74144248-74144267 None:intergenic 40.0%
TATCTACTGCAATGTGGTAG+TGG - chr1_3:74144326-74144345 None:intergenic 40.0%
GGATTTCTCCTAAGAATCGT+AGG - chr1_3:74144902-74144921 None:intergenic 40.0%
ACGATTCTTAGGAGAAATCC+GGG + chr1_3:74144902-74144921 Msa0140030:intron 40.0%
GTCCAATGATTGTTCAAGTC+AGG + chr1_3:74144951-74144970 Msa0140030:intron 40.0%
TTCAAGTCAGGATTTGAACC+CGG + chr1_3:74144963-74144982 Msa0140030:intron 40.0%
! CTTCTGAAGGTAGAATCTTG+AGG - chr1_3:74145251-74145270 None:intergenic 40.0%
CCTCGAAATGTTTCTTCTGA+AGG - chr1_3:74145264-74145283 None:intergenic 40.0%
CCTTCAGAAGAAACATTTCG+AGG + chr1_3:74145261-74145280 Msa0140030:CDS 40.0%
GAAGAAACATTTCGAGGACA+CGG + chr1_3:74145267-74145286 Msa0140030:CDS 40.0%
! GTTGCAGGAGAAGCATATAA+TGG - chr1_3:74145413-74145432 None:intergenic 40.0%
TTATATGCTTCTCCTGCAAC+TGG + chr1_3:74145413-74145432 Msa0140030:CDS 40.0%
TGAAAAGGATTTCCAGTTGC+AGG - chr1_3:74145428-74145447 None:intergenic 40.0%
ATAGTGGCAGGAAACAAAGT+AGG + chr1_3:74145458-74145477 Msa0140030:CDS 40.0%
TAGTGGCAGGAAACAAAGTA+GGG + chr1_3:74145459-74145478 Msa0140030:CDS 40.0%
TTGTTAAGGTCTGGACAACT+AGG + chr1_3:74145536-74145555 Msa0140030:CDS 40.0%
GTGGGACAAGTAGTACAATA+AGG - chr1_3:74145575-74145594 None:intergenic 40.0%
!! CTGAGCAACTTTGAAGTAAG+TGG - chr1_3:74145594-74145613 None:intergenic 40.0%
! TCAAATATAGTGGGAGCTCT+TGG - chr1_3:74145626-74145645 None:intergenic 40.0%
TCCCACTATATTTGATCCCA+AGG + chr1_3:74145631-74145650 Msa0140030:CDS 40.0%
CGTCACCATAAAGAGAATTG+TGG - chr1_3:74145947-74145966 None:intergenic 40.0%
TTCTGCTCTTCATGTATTCC+TGG + chr1_3:74145996-74146015 Msa0140030:CDS 40.0%
CTTCTTACTCTATGTGGAGA+AGG + chr1_3:74146112-74146131 Msa0140030:CDS 40.0%
TATTCGAATCAACCACGCAA+TGG + chr1_3:74146260-74146279 Msa0140030:CDS 40.0%
CTATAAGCAAAGAGGGACTA+AGG - chr1_3:74146461-74146480 None:intergenic 40.0%
CTTAGTCCCTCTTTGCTTAT+AGG + chr1_3:74146459-74146478 Msa0140030:intron 40.0%
GCCAACCTAAACTGCAAAAA+AGG - chr1_3:74146588-74146607 None:intergenic 40.0%
CTTATGTTTCTCCTGAGTCA+AGG + chr1_3:74146607-74146626 Msa0140030:CDS 40.0%
! AACGGTGTCAACAAACAACA+TGG - chr1_3:74146758-74146777 None:intergenic 40.0%
TTATCCTACCAAGTTCCTTG+GGG + chr1_3:74146935-74146954 Msa0140030:CDS 40.0%
CCAAGAATCTTCTACGTCTA+GGG + chr1_3:74146977-74146996 Msa0140030:CDS 40.0%
GACTCGAATATGAATCCAGT+TGG - chr1_3:74147063-74147082 None:intergenic 40.0%
ATTCATATTCGAGTCAGCCT+GGG + chr1_3:74147068-74147087 Msa0140030:CDS 40.0%
TAACCACTTGTGAGACTGTT+TGG + chr1_3:74147405-74147424 Msa0140030:intron 40.0%
AGACTGTTTGGAAGAGCTTA+TGG + chr1_3:74147417-74147436 Msa0140030:intron 40.0%
GCTGTTTGCATAAGCAATCA+TGG - chr1_3:74147487-74147506 None:intergenic 40.0%
TATCATACTATGGCCCTGTT+TGG - chr1_3:74147579-74147598 None:intergenic 40.0%
AGAGGGTTAACCAATGTTTG+CGG + chr1_3:74147754-74147773 Msa0140030:intron 40.0%
ATGCAGTTAGATTAGTGCGA+TGG - chr1_3:74147788-74147807 None:intergenic 40.0%
ACCCTAGTTTCTATCGTAAG+TGG - chr1_3:74147927-74147946 None:intergenic 40.0%
ACTTACGATAGAAACTAGGG+TGG + chr1_3:74147926-74147945 Msa0140030:CDS 40.0%
!! CTCTCGTGCAAAAGTTGATA+TGG + chr1_3:74148182-74148201 Msa0140030:intron 40.0%
AACCAGTTATGGTTGACGAT+AGG + chr1_3:74148221-74148240 Msa0140030:intron 40.0%
TTCCTATCGTCAACCATAAC+TGG - chr1_3:74148226-74148245 None:intergenic 40.0%
GGTTGACGATAGGAAAAACA+AGG + chr1_3:74148231-74148250 Msa0140030:intron 40.0%
!! TGGATATAACAAGGTGTTGC+AGG + chr1_3:74148367-74148386 Msa0140030:intron 40.0%
ACTTCCCACACAAAATAGCT+TGG - chr1_3:74148948-74148967 None:intergenic 40.0%
!!! TTGCTTTTTGCGCTTCTCAT+TGG + chr1_3:74149002-74149021 Msa0140030:CDS 40.0%
! GACTTGTGTGTTTGGTTTCA+CGG - chr1_3:74149188-74149207 None:intergenic 40.0%
ATTTCTACCCTCCTGTAAGT+AGG - chr1_3:74149284-74149303 None:intergenic 40.0%
AGGGTAGAAATGCAACTTAG+AGG + chr1_3:74149293-74149312 Msa0140030:CDS 40.0%
TGTTCCTGAGAAAATGGTTC+TGG + chr1_3:74149529-74149548 Msa0140030:CDS 40.0%
! CTGTATTAGTCTCTCACGAA+TGG - chr1_3:74149941-74149960 None:intergenic 40.0%
AGTAAAATTCTCAGTCAGGG+TGG + chr1_3:74149979-74149998 Msa0140030:CDS 40.0%
AAGATGGTGTTTATTGTGCG+TGG + chr1_3:74150012-74150031 Msa0140030:CDS 40.0%
! GTGGTGAAGAACTTCTAAGA+TGG + chr1_3:74150094-74150113 Msa0140030:CDS 40.0%
! GAACAGTCTTCTGAAAGCAA+AGG + chr1_3:74150123-74150142 Msa0140030:CDS 40.0%
! GATTGCGACAACTTCTTTTG+AGG - chr1_3:74150179-74150198 None:intergenic 40.0%
AAAAATAAAGCTTCACGGCC+AGG + chr1_3:74150253-74150272 Msa0140030:CDS 40.0%
AAAATAAAGCTTCACGGCCA+GGG + chr1_3:74150254-74150273 Msa0140030:CDS 40.0%
AAGATGCTTAACCAATGTGG+AGG + chr1_3:74150298-74150317 Msa0140030:CDS 40.0%
CTTATAACTCCTTGAACACG+AGG - chr1_3:74150389-74150408 None:intergenic 40.0%
CTCGTGTTCAAGGAGTTATA+AGG + chr1_3:74150387-74150406 Msa0140030:CDS 40.0%
!! TTGCATTTCGGTGTTGTGTT+TGG + chr1_3:74150491-74150510 Msa0140030:intron 40.0%
!! TGCATTTCGGTGTTGTGTTT+GGG + chr1_3:74150492-74150511 Msa0140030:intron 40.0%
ACAATAGATTCGGGCGTATT+AGG - chr1_3:74150626-74150645 None:intergenic 40.0%
CGGCGCATGAATATAAATGA+TGG + chr1_3:74150649-74150668 Msa0140030:intron 40.0%
GATGGGTGGTTCAAATCAAT+AGG + chr1_3:74150667-74150686 Msa0140030:intron 40.0%
!! TAAAACACTGGCTTGATAGG+TGG + chr1_3:74150736-74150755 Msa0140030:intron 40.0%
!! AAAACACTGGCTTGATAGGT+GGG + chr1_3:74150737-74150756 Msa0140030:intron 40.0%
! CTGAATTCTGTTTGCTGCAA+AGG - chr1_3:74150963-74150982 None:intergenic 40.0%
CTTTGCAGCAAACAGAATTC+AGG + chr1_3:74150961-74150980 Msa0140030:CDS 40.0%
!! CAAACAGAATTCAGGTTGCA+TGG + chr1_3:74150969-74150988 Msa0140030:CDS 40.0%
ATTCACTACATTGAAGTCCC+TGG + chr1_3:74151079-74151098 Msa0140030:three_prime_UTR 40.0%
AAGTCCCTGGAATAGAATAG+TGG + chr1_3:74151092-74151111 Msa0140030:three_prime_UTR 40.0%
GCATACCACTATTCTATTCC+AGG - chr1_3:74151100-74151119 None:intergenic 40.0%
!! CAAGGAGTGTTAAAGTAGCT+AGG + chr1_3:74151245-74151264 Msa0140030:intron 40.0%
! AGATTAGTGGGTCTTTGAGC+CGG - chr1_3:74143561-74143580 None:intergenic 45.0%
CCCACTAATCTGTTGACCAA+TGG + chr1_3:74143570-74143589 Msa0140030:intron 45.0%
GATAAGGAGTTCGAGGTCAT+GGG - chr1_3:74143937-74143956 None:intergenic 45.0%
! AACTTGAGTTTTCCTGGGGA+TGG - chr1_3:74143984-74144003 None:intergenic 45.0%
!! GTGGGTTAGACCTAATGGTA+AGG + chr1_3:74144132-74144151 Msa0140030:intron 45.0%
ATACTGATGCTTGTAGAGGC+AGG + chr1_3:74144560-74144579 Msa0140030:intron 45.0%
CGATTCTTAGGAGAAATCCG+GGG + chr1_3:74144903-74144922 Msa0140030:intron 45.0%
TCAAGTCAGGATTTGAACCC+GGG + chr1_3:74144964-74144983 Msa0140030:intron 45.0%
ACCACTTGAGCCAAATCACT+TGG + chr1_3:74145024-74145043 Msa0140030:intron 45.0%
! ACCAAGTGATTTGGCTCAAG+TGG - chr1_3:74145028-74145047 None:intergenic 45.0%
! CCACGTGTTTCTGACAGAAT+CGG - chr1_3:74145212-74145231 None:intergenic 45.0%
TTCCATTCCTATGGCTTCTC+TGG + chr1_3:74145301-74145320 Msa0140030:CDS 45.0%
ATCCAGAGAAGCCATAGGAA+TGG - chr1_3:74145306-74145325 None:intergenic 45.0%
TATGGATCCAGAGAAGCCAT+AGG - chr1_3:74145311-74145330 None:intergenic 45.0%
ACTCCTGTTAGCCAAATGAG+TGG + chr1_3:74145386-74145405 Msa0140030:CDS 45.0%
AGTGGCAGGAAACAAAGTAG+GGG + chr1_3:74145460-74145479 Msa0140030:CDS 45.0%
! TCTCTTTATGGTGACGCCAA+AGG + chr1_3:74145951-74145970 Msa0140030:CDS 45.0%
! TATGGTGACGCCAAAGGATA+TGG + chr1_3:74145957-74145976 Msa0140030:CDS 45.0%
ACGCGAAGGTTGTACAACAA+TGG + chr1_3:74146033-74146052 Msa0140030:CDS 45.0%
! GTTTGTTGACACCGTTACCT+CGG + chr1_3:74146762-74146781 Msa0140030:intron 45.0%
TCAACACAACACCGAGGTAA+CGG - chr1_3:74146776-74146795 None:intergenic 45.0%
GCCAAGAATCTTCTACGTCT+AGG + chr1_3:74146976-74146995 Msa0140030:CDS 45.0%
CCCTAGACGTAGAAGATTCT+TGG - chr1_3:74146980-74146999 None:intergenic 45.0%
CTAATTGGTCAGTCTCCAAC+TGG + chr1_3:74147045-74147064 Msa0140030:CDS 45.0%
GATTCATATTCGAGTCAGCC+TGG + chr1_3:74147067-74147086 Msa0140030:CDS 45.0%
ACCAGCATGAACCAACAACA+TGG - chr1_3:74147134-74147153 None:intergenic 45.0%
GGTTCATGCTGGTATCTCTT+TGG + chr1_3:74147141-74147160 Msa0140030:CDS 45.0%
CTTCCAAACAGTCTCACAAG+TGG - chr1_3:74147411-74147430 None:intergenic 45.0%
AAGCAATCATGGAGAGCTCA+TGG - chr1_3:74147476-74147495 None:intergenic 45.0%
! GCAAACATTGGTTAACCCTC+TGG - chr1_3:74147755-74147774 None:intergenic 45.0%
GAGGGTTAACCAATGTTTGC+GGG + chr1_3:74147755-74147774 Msa0140030:intron 45.0%
AGTTAGATTAGTGCGATGGC+AGG - chr1_3:74147784-74147803 None:intergenic 45.0%
CAAGAGTCCCAATCCTATGA+TGG - chr1_3:74148985-74149004 None:intergenic 45.0%
CAGAACTTTCTTCAGGCTCT+TGG + chr1_3:74149032-74149051 Msa0140030:CDS 45.0%
ACTTTCTTCAGGCTCTTGGA+CGG + chr1_3:74149036-74149055 Msa0140030:CDS 45.0%
! TGTGTGTTTGGTTTCACGGT+AGG - chr1_3:74149184-74149203 None:intergenic 45.0%
TGTTCCATCCTACTTACAGG+AGG + chr1_3:74149273-74149292 Msa0140030:intron 45.0%
GTTCCATCCTACTTACAGGA+GGG + chr1_3:74149274-74149293 Msa0140030:intron 45.0%
GGATACTATATCTGTCACGC+AGG + chr1_3:74149462-74149481 Msa0140030:intron 45.0%
GTATAGTTGGGCTGCAACAA+GGG + chr1_3:74149505-74149524 Msa0140030:CDS 45.0%
TATAGTTGGGCTGCAACAAG+GGG + chr1_3:74149506-74149525 Msa0140030:CDS 45.0%
!! AAGGGGTGTTCCTGAGAAAA+TGG + chr1_3:74149523-74149542 Msa0140030:CDS 45.0%
ATGTCTGTCTGGAGATCTTC+TGG - chr1_3:74149563-74149582 None:intergenic 45.0%
! CACGAATGGCGTCTAAGATA+GGG - chr1_3:74149927-74149946 None:intergenic 45.0%
! TCACGAATGGCGTCTAAGAT+AGG - chr1_3:74149928-74149947 None:intergenic 45.0%
ATTCCGGTTCCGTTATCAGA+AGG + chr1_3:74150063-74150082 Msa0140030:CDS 45.0%
TTCCGGTTCCGTTATCAGAA+GGG + chr1_3:74150064-74150083 Msa0140030:CDS 45.0%
CAAGCATCCCCTTCTGATAA+CGG - chr1_3:74150075-74150094 None:intergenic 45.0%
TTATCAGAAGGGGATGCTTG+TGG + chr1_3:74150075-74150094 Msa0140030:CDS 45.0%
GATGTGGTTTCTCTTGCAGA+AGG + chr1_3:74150227-74150246 Msa0140030:intron 45.0%
GAGTGAAAATGCCTCCACAT+TGG - chr1_3:74150312-74150331 None:intergenic 45.0%
CACAAAGACAGAAGGGGAAT+GGG - chr1_3:74150433-74150452 None:intergenic 45.0%
ACACAAAGACAGAAGGGGAA+TGG - chr1_3:74150434-74150453 None:intergenic 45.0%
!! TTTCGGTGTTGTGTTTGGGT+TGG + chr1_3:74150496-74150515 Msa0140030:intron 45.0%
!! TTCGGTGTTGTGTTTGGGTT+GGG + chr1_3:74150497-74150516 Msa0140030:intron 45.0%
CCTTATAAGACGGCTCTGTA+GGG - chr1_3:74150533-74150552 None:intergenic 45.0%
ACCTTATAAGACGGCTCTGT+AGG - chr1_3:74150534-74150553 None:intergenic 45.0%
ACGCCCGAATCTATTGTACT+CGG + chr1_3:74150629-74150648 Msa0140030:intron 45.0%
TGCGCCGAGTACAATAGATT+CGG - chr1_3:74150636-74150655 None:intergenic 45.0%
GCTGCAAAGGATTTCCAGTA+AGG - chr1_3:74150950-74150969 None:intergenic 45.0%
!! TTCAGGTTGCATGGAGATAC+AGG + chr1_3:74150978-74150997 Msa0140030:CDS 45.0%
!!! ATTATTATTATTAATTTGTT+TGG + chr1_3:74143526-74143545 Msa0140030:intron 5.0%
!!! AAAAAAAAAAAATTGATTTA+AGG + chr1_3:74144377-74144396 Msa0140030:intron 5.0%
!!! AAAAAAAAAAATTGATTTAA+GGG + chr1_3:74144378-74144397 Msa0140030:intron 5.0%
!!! TAAATTATATTTTTAAAAGA+AGG - chr1_3:74145754-74145773 None:intergenic 5.0%
!! TATAATATTAAATGTTAAAA+TGG - chr1_3:74148747-74148766 None:intergenic 5.0%
!! AACATTTAATATTATAAAAA+AGG + chr1_3:74148751-74148770 Msa0140030:intron 5.0%
!! ACATTTAATATTATAAAAAA+GGG + chr1_3:74148752-74148771 Msa0140030:intron 5.0%
!!! AATTTTATTTAAAACATTAT+AGG - chr1_3:74149703-74149722 None:intergenic 5.0%
GGATAAGGAGTTCGAGGTCA+TGG - chr1_3:74143938-74143957 None:intergenic 50.0%
TGCTCGAGTCCCTTACCATT+AGG - chr1_3:74144145-74144164 None:intergenic 50.0%
CCGATTCTGTCAGAAACACG+TGG + chr1_3:74145209-74145228 Msa0140030:CDS 50.0%
CTTCTCTGGATCCATACGAG+AGG + chr1_3:74145315-74145334 Msa0140030:CDS 50.0%
! AGATTCGGTTGCCTCTCGTA+TGG - chr1_3:74145329-74145348 None:intergenic 50.0%
GAGAGGCAACCGAATCTTGT+CGG + chr1_3:74145332-74145351 Msa0140030:CDS 50.0%
CCGGTATGTCCGACAAGATT+CGG - chr1_3:74145344-74145363 None:intergenic 50.0%
CCGAATCTTGTCGGACATAC+CGG + chr1_3:74145341-74145360 Msa0140030:CDS 50.0%
! GTTTTCCTCGTGGTACGAAG+CGG - chr1_3:74145368-74145387 None:intergenic 50.0%
! GCTAACAGGAGTTTTCCTCG+TGG - chr1_3:74145378-74145397 None:intergenic 50.0%
GGACCACTCATTTGGCTAAC+AGG - chr1_3:74145392-74145411 None:intergenic 50.0%
TGTTATGAACCCTCACGCGA+AGG + chr1_3:74146019-74146038 Msa0140030:CDS 50.0%
GTTGTACAACCTTCGCGTGA+GGG - chr1_3:74146031-74146050 None:intergenic 50.0%
TGTTGTACAACCTTCGCGTG+AGG - chr1_3:74146032-74146051 None:intergenic 50.0%
! CAAGTGTTGTTGCCATTGCG+TGG - chr1_3:74146275-74146294 None:intergenic 50.0%
GGCTGTCGAGCATTATGTCT+TGG + chr1_3:74146517-74146536 Msa0140030:intron 50.0%
TCTCCTGAGTCAAGGGTTGT+TGG + chr1_3:74146615-74146634 Msa0140030:CDS 50.0%
! AGTCAAGGGTTGTTGGTGCT+GGG + chr1_3:74146622-74146641 Msa0140030:CDS 50.0%
TGTTGTATCGCCTCTTCCTC+AGG + chr1_3:74146713-74146732 Msa0140030:CDS 50.0%
! AAGGCATCAACACAACACCG+AGG - chr1_3:74146782-74146801 None:intergenic 50.0%
ATGACCCCAAGGAACTTGGT+AGG - chr1_3:74146942-74146961 None:intergenic 50.0%
ATTTGCTCCTGATGACCCCA+AGG - chr1_3:74146953-74146972 None:intergenic 50.0%
GGAGACTGACCAATTAGCAG+AGG - chr1_3:74147042-74147061 None:intergenic 50.0%
ATGCTATCCGGCCATGTTGT+TGG + chr1_3:74147120-74147139 Msa0140030:CDS 50.0%
GCATGAACCAACAACATGGC+CGG - chr1_3:74147130-74147149 None:intergenic 50.0%
!! GCCATGTTGTTGGTTCATGC+TGG + chr1_3:74147130-74147149 Msa0140030:CDS 50.0%
CTGGTATCTCTTTGGCCTAC+AGG + chr1_3:74147149-74147168 Msa0140030:CDS 50.0%
AAGGTTACATCGGGCCTGTT+TGG + chr1_3:74147353-74147372 Msa0140030:intron 50.0%
TCATAACGATGCATGGAGCC+AGG + chr1_3:74147830-74147849 Msa0140030:CDS 50.0%
!! TGCACTCTTTTGGGGATTCC+AGG + chr1_3:74147965-74147984 Msa0140030:CDS 50.0%
CAGCAAATCAGTACTCTGGC+TGG + chr1_3:74148912-74148931 Msa0140030:intron 50.0%
CTACCCTCCTGTAAGTAGGA+TGG - chr1_3:74149280-74149299 None:intergenic 50.0%
GAGGTCGTGATGTTGAGCAA+TGG + chr1_3:74149312-74149331 Msa0140030:CDS 50.0%
GTTCTTCTGGTAAGCGACGA+TGG - chr1_3:74149343-74149362 None:intergenic 50.0%
GCAGGCTGAACGGTATAGTT+GGG + chr1_3:74149493-74149512 Msa0140030:CDS 50.0%
GGTATAGTTGGGCTGCAACA+AGG + chr1_3:74149504-74149523 Msa0140030:CDS 50.0%
GATGGCGTCTTATGTCTGTC+TGG - chr1_3:74149574-74149593 None:intergenic 50.0%
AGGGTCATCCTCAGCCATAT+GGG - chr1_3:74149908-74149927 None:intergenic 50.0%
TAGGGTCATCCTCAGCCATA+TGG - chr1_3:74149909-74149928 None:intergenic 50.0%
!! GGGTGGTCTTGTACAGAAGA+TGG + chr1_3:74149996-74150015 Msa0140030:CDS 50.0%
! CGTGGAAAATTGGAGAGCGT+CGG + chr1_3:74150030-74150049 Msa0140030:CDS 50.0%
!! AAAATTGGAGAGCGTCGGAG+AGG + chr1_3:74150035-74150054 Msa0140030:CDS 50.0%
TCCGGTTCCGTTATCAGAAG+GGG + chr1_3:74150065-74150084 Msa0140030:CDS 50.0%
!! TCCCCTTCTGATAACGGAAC+CGG - chr1_3:74150069-74150088 None:intergenic 50.0%
AAGACAGAAGGGGAATGGGA+TGG - chr1_3:74150429-74150448 None:intergenic 50.0%
CCCTACAGAGCCGTCTTATA+AGG + chr1_3:74150530-74150549 Msa0140030:intron 50.0%
GCGCCGAGTACAATAGATTC+GGG - chr1_3:74150635-74150654 None:intergenic 50.0%
CTTAGGAGAAATCCGGGGCT+TGG + chr1_3:74144908-74144927 Msa0140030:intron 55.0%
GCGTGAGGGTTCATAACACC+AGG - chr1_3:74146017-74146036 None:intergenic 55.0%
GCACCAACAACCCTTGACTC+AGG - chr1_3:74146621-74146640 None:intergenic 55.0%
GAGTCAAGGGTTGTTGGTGC+TGG + chr1_3:74146621-74146640 Msa0140030:CDS 55.0%
!! GTCAAGGGTTGTTGGTGCTG+GGG + chr1_3:74146623-74146642 Msa0140030:CDS 55.0%
CCTGATGACCCCAAGGAACT+TGG - chr1_3:74146946-74146965 None:intergenic 55.0%
CCAAGTTCCTTGGGGTCATC+AGG + chr1_3:74146943-74146962 Msa0140030:CDS 55.0%
GATGCATGGAGCCAGGATCA+GGG + chr1_3:74147837-74147856 Msa0140030:CDS 55.0%
AATCTTTGGCGCCCTGATCC+TGG - chr1_3:74147851-74147870 None:intergenic 55.0%
TTCTTCAGGCTCTTGGACGG+AGG + chr1_3:74149039-74149058 Msa0140030:CDS 55.0%
TCTTGGACGGAGGTAGAGCA+TGG + chr1_3:74149049-74149068 Msa0140030:intron 55.0%
ATCTGTCACGCAGGAGAGTG+CGG + chr1_3:74149471-74149490 Msa0140030:intron 55.0%
GGCAGGCTGAACGGTATAGT+TGG + chr1_3:74149492-74149511 Msa0140030:CDS 55.0%
CGTCGGAGAGGATGGAATTC+CGG + chr1_3:74150047-74150066 Msa0140030:CDS 55.0%
TTCGGTCGCTAGTCAAACCC+TGG - chr1_3:74150274-74150293 None:intergenic 55.0%
CCTGGGGATGGTAGCTCAAC+TGG - chr1_3:74143972-74143991 None:intergenic 60.0%
CCAGTTGAGCTACCATCCCC+AGG + chr1_3:74143969-74143988 Msa0140030:intron 60.0%
! GGAGAAATCCGGGGCTTGGT+CGG + chr1_3:74144912-74144931 Msa0140030:intron 60.0%
! GAGAAATCCGGGGCTTGGTC+GGG + chr1_3:74144913-74144932 Msa0140030:intron 60.0%
CTTATCTCCCGACCAAGCCC+CGG - chr1_3:74144923-74144942 None:intergenic 60.0%
GGCAGGCATCCCGCAAACAT+TGG - chr1_3:74147767-74147786 None:intergenic 60.0%
CGATGCATGGAGCCAGGATC+AGG + chr1_3:74147836-74147855 Msa0140030:CDS 60.0%
!! TTGGAGAGCGTCGGAGAGGA+TGG + chr1_3:74150039-74150058 Msa0140030:CDS 60.0%
TTGCGGAGCCCTCGTGTTCA+AGG + chr1_3:74150377-74150396 Msa0140030:CDS 60.0%
CCTCGTGGTACGAAGCGGAC+CGG - chr1_3:74145363-74145382 None:intergenic 65.0%
! GGAGAGTGCGGCAGGCTGAA+CGG + chr1_3:74149483-74149502 Msa0140030:intron 65.0%
CCGGTCCGCTTCGTACCACG+AGG + chr1_3:74145360-74145379 Msa0140030:CDS 70.0%
! GTCACGCAGGAGAGTGCGGC+AGG + chr1_3:74149475-74149494 Msa0140030:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 74143267 74151372 74143267 ID=Msa0140030;Name=Msa0140030
chr1_3 mRNA 74143267 74151372 74143267 ID=Msa0140030-mRNA-1;Parent=Msa0140030;Name=Msa0140030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=174|1|1|1|0.84|0.71|14|211|757
chr1_3 exon 74143267 74143425 74143267 ID=Msa0140030-mRNA-1:exon:25753;Parent=Msa0140030-mRNA-1
chr1_3 exon 74145167 74145652 74145167 ID=Msa0140030-mRNA-1:exon:25754;Parent=Msa0140030-mRNA-1
chr1_3 exon 74145942 74146133 74145942 ID=Msa0140030-mRNA-1:exon:25755;Parent=Msa0140030-mRNA-1
chr1_3 exon 74146249 74146347 74146249 ID=Msa0140030-mRNA-1:exon:25756;Parent=Msa0140030-mRNA-1
chr1_3 exon 74146597 74146734 74146597 ID=Msa0140030-mRNA-1:exon:25757;Parent=Msa0140030-mRNA-1
chr1_3 exon 74146922 74147170 74146922 ID=Msa0140030-mRNA-1:exon:25758;Parent=Msa0140030-mRNA-1
chr1_3 exon 74147756 74147986 74147756 ID=Msa0140030-mRNA-1:exon:25759;Parent=Msa0140030-mRNA-1
chr1_3 exon 74148915 74149060 74148915 ID=Msa0140030-mRNA-1:exon:25760;Parent=Msa0140030-mRNA-1
chr1_3 exon 74149292 74149369 74149292 ID=Msa0140030-mRNA-1:exon:25761;Parent=Msa0140030-mRNA-1
chr1_3 exon 74149484 74149613 74149484 ID=Msa0140030-mRNA-1:exon:25762;Parent=Msa0140030-mRNA-1
chr1_3 exon 74149892 74150144 74149892 ID=Msa0140030-mRNA-1:exon:25763;Parent=Msa0140030-mRNA-1
chr1_3 exon 74150246 74150408 74150246 ID=Msa0140030-mRNA-1:exon:25764;Parent=Msa0140030-mRNA-1
chr1_3 exon 74150937 74151248 74150937 ID=Msa0140030-mRNA-1:exon:25765;Parent=Msa0140030-mRNA-1
chr1_3 exon 74151350 74151372 74151350 ID=Msa0140030-mRNA-1:exon:25766;Parent=Msa0140030-mRNA-1
chr1_3 five_prime_UTR 74143267 74143425 74143267 ID=Msa0140030-mRNA-1:five_prime_utr;Parent=Msa0140030-mRNA-1
chr1_3 five_prime_UTR 74145167 74145181 74145167 ID=Msa0140030-mRNA-1:five_prime_utr;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74145182 74145652 74145182 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74145942 74146133 74145942 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74146249 74146347 74146249 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74146597 74146734 74146597 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74146922 74147170 74146922 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74147756 74147986 74147756 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74148915 74149060 74148915 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74149292 74149369 74149292 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74149484 74149613 74149484 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74149892 74150144 74149892 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74150246 74150408 74150246 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 CDS 74150937 74151060 74150937 ID=Msa0140030-mRNA-1:cds;Parent=Msa0140030-mRNA-1
chr1_3 three_prime_UTR 74151061 74151248 74151061 ID=Msa0140030-mRNA-1:three_prime_utr;Parent=Msa0140030-mRNA-1
chr1_3 three_prime_UTR 74151350 74151372 74151350 ID=Msa0140030-mRNA-1:three_prime_utr;Parent=Msa0140030-mRNA-1
Gene Sequence

>Msa0140030

ATGAATCATTTTGATAAAGATGAAATTCCGATTCTGTCAGAAACACGTGGACAACGATCTGATGAACCTCAAGATTCTACCTTCAGAAGAAACATTTCGAGGACACGGAGTGCTTCAATTTCCATTCCTATGGCTTCTCTGGATCCATACGAGAGGCAACCGAATCTTGTCGGACATACCGGTCCGCTTCGTACCACGAGGAAAACTCCTGTTAGCCAAATGAGTGGTCCATTATATGCTTCTCCTGCAACTGGAAATCCTTTTCAGAATAATATAATAGTGGCAGGAAACAAAGTAGGGGAGAACAAGACAGAAAAGTTTTCTACATTTGATGGCACGGATAAAAATGAACACTTGTTAAGGTCTGGACAACTAGGAATGTGTAATGATCCTTATTGTACTACTTGTCCCACTTACTTCAAAGTTGCTCAGCAAAGAAAACCAAGAGCTCCCACTATATTTGATCCCAAGTTCCACAATTCTCTTTATGGTGACGCCAAAGGATATGGAAGAAAACTTTTTTCTTTCTGCTCTTCATGTATTCCTGGTGTTATGAACCCTCACGCGAAGGTTGTACAACAATGGAACAAGTTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCGTTATTTTTCTTCTTACTCTATGTGGAGAAGGATAATAAATGTATTCGAATCAACCACGCAATGGCAACAACACTTGTTGTACTTAGAAGCGTAACCGATGTTGTGTATTTCTTAAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTTGTTGGTGCTGGGGATTTAGTTGACCATCCCAAGAAAATAGCTGTTAATTACTTTAAGAGCTACTTTCTCTTCGACTTATTTGTTGTATCGCCTCTTCCTCAGATAATGATAATATTTATCCTACCAAGTTCCTTGGGGTCATCAGGAGCAAATTATGCCAAGAATCTTCTACGTCTAGGGATCCTTATACAATATATTCCCAGATTATTCAGATTTTTGCCTCTGCTAATTGGTCAGTCTCCAACTGGATTCATATTCGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTGATTTTTATGCTATCCGGCCATGTTGTTGGTTCATGCTGGTATCTCTTTGGCCTACAGAGGGTTAACCAATGTTTGCGGGATGCCTGCCATCGCACTAATCTAACTGCATGCATGAAATTGATTGATTGTCATCATAACGATGCATGGAGCCAGGATCAGGGCGCCAAAGATTGTTTGAATTCTTCATCTGATGCTTTTTCTTATGGAATTTATAACGCTGCTGTACCACTTACGATAGAAACTAGGGTGGTCAACAAATATGTGTATGCACTCTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCAACAACCAAGCTATTTTGTGTGGGAAGTTCTCTTTACAATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGGTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGAACTTAAAAGGAGAGTGCGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTGGAAAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCATCTCTTCAAATTTGTTAATAAAGTTCGAATTTTTTCCCATATGGCTGAGGATGACCCTATCTTAGACGCCATTCGTGAGAGACTAATACAGACGACATACATTAAAGGAAGTAAAATTCTCAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCGTCGGAGAGGATGGAATTCCGGTTCCGTTATCAGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGAAGGTAAAAAAATAAAGCTTCACGGCCAGGGTTTGACTAGCGACCGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGTGCTAAAGACATTGAAGAAGTCACAACTCTTTTCGCAAGATATTTGCGGAGCCCTCGTGTTCAAGGAGTTATAAGGTATGAATCACCTTACTGGAAATCCTTTGCAGCAAACAGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGAGCTAATACCGCACAAAATGATTATCAAACATTGATGCCATAG
Protein sequence

>Msa0140030

MNHFDKDEIPILSETRGQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTTRKTPVSQMSGPLYASPATGNPFQNNIIVAGNKVGENKTEKFSTFDGTDKNEHLLRSGQLGMCNDPYCTTCPTYFKVAQQRKPRAPTIFDPKFHNSLYGDAKGYGRKLFSFCSSCIPGVMNPHAKVVQQWNKFLAIFCLVAIFVDPLFFFLLYVEKDNKCIRINHAMATTLVVLRSVTDVVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQIMIIFILPSSLGSSGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHRTNLTACMKLIDCHHNDAWSQDQGAKDCLNSSSDAFSYGIYNAAVPLTIETRVVNKYVYALFWGFQQISTLAGNQQPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEELKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFSHMAEDDPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYLEQSSESKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARYLRSPRVQGVIRYESPYWKSFAANRIQVAWRYRKKRLSRANTAQNDYQTLMP*