Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491520 | XP_003598625.1 | 96.466 | 283 | 8 | 1 | 1 | 281 | 1 | 283 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491520 | sp|Q9FLE8|Y5986_ARATH | 48.780 | 164 | 66 | 6 | 113 | 258 | 225 | 388 | 2.66e-41 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491520 | G7IYV7 | 96.466 | 283 | 8 | 1 | 1 | 281 | 1 | 283 | 0.0 | 553 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0491520 | -0.842070 | 3.237360e-58 | -8.615850e-47 |
| Msa0000550 | Msa0491520 | -0.810192 | 1.302321e-50 | -8.615850e-47 |
| Msa0003560 | Msa0491520 | 0.809549 | 1.790717e-50 | -8.615850e-47 |
| Msa0025740 | Msa0491520 | 0.813822 | 2.107172e-51 | -8.615850e-47 |
| Msa0032610 | Msa0491520 | 0.822443 | 2.363013e-53 | -8.615850e-47 |
| Msa0038020 | Msa0491520 | 0.813981 | 1.943945e-51 | -8.615850e-47 |
| Msa0050730 | Msa0491520 | 0.808485 | 3.026854e-50 | -8.615850e-47 |
| Msa0050760 | Msa0491520 | 0.818699 | 1.710680e-52 | -8.615850e-47 |
| Msa0052030 | Msa0491520 | 0.802984 | 4.327826e-49 | -8.615850e-47 |
| Msa0058270 | Msa0491520 | 0.819183 | 1.327287e-52 | -8.615850e-47 |
| Msa0071240 | Msa0491520 | 0.824383 | 8.316321e-54 | -8.615850e-47 |
| Msa0071550 | Msa0491520 | 0.815511 | 8.904118e-52 | -8.615850e-47 |
| Msa0071910 | Msa0491520 | -0.822986 | 1.766199e-53 | -8.615850e-47 |
| Msa0084430 | Msa0491520 | 0.804218 | 2.400724e-49 | -8.615850e-47 |
| Msa0085720 | Msa0491520 | 0.846531 | 2.048313e-59 | -8.615850e-47 |
| Msa0090030 | Msa0491520 | 0.818264 | 2.146140e-52 | -8.615850e-47 |
| Msa0092990 | Msa0491520 | 0.821345 | 4.241130e-53 | -8.615850e-47 |
| Msa0108850 | Msa0491520 | 0.800714 | 1.266337e-48 | -8.615850e-47 |
| Msa0120340 | Msa0491520 | 0.854849 | 9.357758e-62 | -8.615850e-47 |
| Msa0124550 | Msa0491520 | 0.816354 | 5.776024e-52 | -8.615850e-47 |
| Msa0134110 | Msa0491520 | -0.821827 | 3.283237e-53 | -8.615850e-47 |
| Msa0140030 | Msa0491520 | 0.826187 | 3.112856e-54 | -8.615850e-47 |
| Msa0140510 | Msa0491520 | -0.803597 | 3.231844e-49 | -8.615850e-47 |
| Msa0140520 | Msa0491520 | -0.816535 | 5.259236e-52 | -8.615850e-47 |
| Msa0148120 | Msa0491520 | 0.808007 | 3.827243e-50 | -8.615850e-47 |
| Msa0152170 | Msa0491520 | 0.803153 | 3.992783e-49 | -8.615850e-47 |
| Msa0163780 | Msa0491520 | 0.816429 | 5.554865e-52 | -8.615850e-47 |
| Msa0165970 | Msa0491520 | 0.803119 | 4.058163e-49 | -8.615850e-47 |
| Msa0172780 | Msa0491520 | 0.813585 | 2.375442e-51 | -8.615850e-47 |
| Msa0175050 | Msa0491520 | 0.821224 | 4.522546e-53 | -8.615850e-47 |
| Msa0187060 | Msa0491520 | 0.817734 | 2.828272e-52 | -8.615850e-47 |
| Msa0188630 | Msa0491520 | 0.805529 | 1.277700e-49 | -8.615850e-47 |
| Msa0191630 | Msa0491520 | 0.808750 | 2.656426e-50 | -8.615850e-47 |
| Msa0199800 | Msa0491520 | -0.809763 | 1.611252e-50 | -8.615850e-47 |
| Msa0217400 | Msa0491520 | 0.805615 | 1.225592e-49 | -8.615850e-47 |
| Msa0223100 | Msa0491520 | 0.825916 | 3.611050e-54 | -8.615850e-47 |
| Msa0223290 | Msa0491520 | 0.844606 | 6.810539e-59 | -8.615850e-47 |
| Msa0223380 | Msa0491520 | 0.860937 | 1.457479e-63 | -8.615850e-47 |
| Msa0233610 | Msa0491520 | 0.834993 | 2.173639e-56 | -8.615850e-47 |
| Msa0365490 | Msa0491520 | 0.883571 | 4.009103e-71 | -8.615850e-47 |
| Msa0370870 | Msa0491520 | 0.802577 | 5.250748e-49 | -8.615850e-47 |
| Msa0377530 | Msa0491520 | 0.809100 | 2.235884e-50 | -8.615850e-47 |
| Msa0388030 | Msa0491520 | -0.853738 | 1.959471e-61 | -8.615850e-47 |
| Msa0389810 | Msa0491520 | 0.854760 | 9.930846e-62 | -8.615850e-47 |
| Msa0404700 | Msa0491520 | 0.805121 | 1.555554e-49 | -8.615850e-47 |
| Msa0416320 | Msa0491520 | 0.817315 | 3.515557e-52 | -8.615850e-47 |
| Msa0419620 | Msa0491520 | -0.825092 | 5.658775e-54 | -8.615850e-47 |
| Msa0444090 | Msa0491520 | 0.891320 | 4.423120e-74 | -8.615850e-47 |
| Msa0445280 | Msa0491520 | 0.804622 | 1.977601e-49 | -8.615850e-47 |
| Msa0457010 | Msa0491520 | 0.800014 | 1.757949e-48 | -8.615850e-47 |
| Msa0458440 | Msa0491520 | 0.853847 | 1.823157e-61 | -8.615850e-47 |
| Msa0462540 | Msa0491520 | 0.802154 | 6.418094e-49 | -8.615850e-47 |
| Msa0464420 | Msa0491520 | 0.807054 | 6.096705e-50 | -8.615850e-47 |
| Msa0464900 | Msa0491520 | 0.870703 | 1.194605e-66 | -8.615850e-47 |
| Msa0465680 | Msa0491520 | -0.823589 | 1.276602e-53 | -8.615850e-47 |
| Msa0467960 | Msa0491520 | -0.800735 | 1.253629e-48 | -8.615850e-47 |
| Msa0468130 | Msa0491520 | 0.862364 | 5.341970e-64 | -8.615850e-47 |
| Msa0473240 | Msa0491520 | 0.837602 | 4.719347e-57 | -8.615850e-47 |
| Msa0475410 | Msa0491520 | 0.805933 | 1.050880e-49 | -8.615850e-47 |
| Msa0480600 | Msa0491520 | 0.814482 | 1.506262e-51 | -8.615850e-47 |
| Msa0482190 | Msa0491520 | -0.804917 | 1.715570e-49 | -8.615850e-47 |
| Msa0241460 | Msa0491520 | -0.805832 | 1.103568e-49 | -8.615850e-47 |
| Msa0266210 | Msa0491520 | 0.851449 | 8.814039e-61 | -8.615850e-47 |
| Msa0269450 | Msa0491520 | 0.827681 | 1.367863e-54 | -8.615850e-47 |
| Msa0270220 | Msa0491520 | -0.800059 | 1.720943e-48 | -8.615850e-47 |
| Msa0274350 | Msa0491520 | 0.808216 | 3.453791e-50 | -8.615850e-47 |
| Msa0276920 | Msa0491520 | 0.800982 | 1.116290e-48 | -8.615850e-47 |
| Msa0279210 | Msa0491520 | -0.858886 | 6.052400e-63 | -8.615850e-47 |
| Msa0279250 | Msa0491520 | -0.833797 | 4.338832e-56 | -8.615850e-47 |
| Msa0287670 | Msa0491520 | 0.849443 | 3.224068e-60 | -8.615850e-47 |
| Msa0288320 | Msa0491520 | 0.808760 | 2.643250e-50 | -8.615850e-47 |
| Msa0302650 | Msa0491520 | 0.818663 | 1.742888e-52 | -8.615850e-47 |
| Msa0304700 | Msa0491520 | 0.825697 | 4.070392e-54 | -8.615850e-47 |
| Msa0307830 | Msa0491520 | -0.816759 | 4.686254e-52 | -8.615850e-47 |
| Msa0312310 | Msa0491520 | 0.818502 | 1.896173e-52 | -8.615850e-47 |
| Msa0314120 | Msa0491520 | 0.816316 | 5.889351e-52 | -8.615850e-47 |
| Msa0318970 | Msa0491520 | -0.851605 | 7.959677e-61 | -8.615850e-47 |
| Msa0326670 | Msa0491520 | 0.807358 | 5.254712e-50 | -8.615850e-47 |
| Msa0335040 | Msa0491520 | 0.809439 | 1.891009e-50 | -8.615850e-47 |
| Msa0344870 | Msa0491520 | 0.822462 | 2.338880e-53 | -8.615850e-47 |
| Msa0349680 | Msa0491520 | 0.818446 | 1.951527e-52 | -8.615850e-47 |
| Msa0362060 | Msa0491520 | 0.825125 | 5.558593e-54 | -8.615850e-47 |
| Msa0363170 | Msa0491520 | 0.812440 | 4.234990e-51 | -8.615850e-47 |
| Msa0489610 | Msa0491520 | 0.807514 | 4.870827e-50 | -8.615850e-47 |
| Msa0491500 | Msa0491520 | 0.934177 | 6.045523e-96 | -8.615850e-47 |
| Msa0491520 | Msa0505060 | 0.857251 | 1.853750e-62 | -8.615850e-47 |
| Msa0491520 | Msa0510040 | 0.809598 | 1.747835e-50 | -8.615850e-47 |
| Msa0491520 | Msa0511720 | -0.825213 | 5.297501e-54 | -8.615850e-47 |
| Msa0491520 | Msa0517490 | 0.803978 | 2.692795e-49 | -8.615850e-47 |
| Msa0491520 | Msa0524890 | -0.809187 | 2.141809e-50 | -8.615850e-47 |
| Msa0491520 | Msa0525610 | 0.803207 | 3.891035e-49 | -8.615850e-47 |
| Msa0491520 | Msa0530650 | 0.842684 | 2.224450e-58 | -8.615850e-47 |
| Msa0491520 | Msa0532100 | -0.801579 | 8.425977e-49 | -8.615850e-47 |
| Msa0491520 | Msa0537770 | 0.801369 | 9.300167e-49 | -8.615850e-47 |
| Msa0491520 | Msa0547400 | 0.815903 | 7.280730e-52 | -8.615850e-47 |
| Msa0491520 | Msa0553220 | -0.803357 | 3.623978e-49 | -8.615850e-47 |
| Msa0491520 | Msa0553460 | 0.803671 | 3.118494e-49 | -8.615850e-47 |
| Msa0491520 | Msa0558690 | 0.811992 | 5.303924e-51 | -8.615850e-47 |
| Msa0491520 | Msa0561130 | -0.815323 | 9.805007e-52 | -8.615850e-47 |
| Msa0491520 | Msa0581920 | 0.846357 | 2.285888e-59 | -8.615850e-47 |
| Msa0491520 | Msa0587190 | 0.853169 | 2.853767e-61 | -8.615850e-47 |
| Msa0491520 | Msa0599580 | 0.822675 | 2.086351e-53 | -8.615850e-47 |
| Msa0491520 | Msa0611550 | 0.807375 | 5.211866e-50 | -8.615850e-47 |
| Msa0491520 | Msa0615270 | -0.805745 | 1.151076e-49 | -8.615850e-47 |
| Msa0491520 | Msa0622340 | 0.810766 | 9.792838e-51 | -8.615850e-47 |
| Msa0491520 | Msa0625840 | -0.818219 | 2.197593e-52 | -8.615850e-47 |
| Msa0491520 | Msa0626990 | 0.836340 | 9.911879e-57 | -8.615850e-47 |
| Msa0491520 | Msa0627350 | 0.837739 | 4.352298e-57 | -8.615850e-47 |
| Msa0491520 | Msa0637070 | 0.811355 | 7.296023e-51 | -8.615850e-47 |
| Msa0491520 | Msa0638280 | 0.805495 | 1.298900e-49 | -8.615850e-47 |
| Msa0491520 | Msa0638320 | 0.817141 | 3.846028e-52 | -8.615850e-47 |
| Msa0491520 | Msa0647450 | -0.813950 | 1.974091e-51 | -8.615850e-47 |
| Msa0491520 | Msa0651320 | 0.822100 | 2.837668e-53 | -8.615850e-47 |
| Msa0491520 | Msa0654010 | 0.807886 | 4.059811e-50 | -8.615850e-47 |
| Msa0491520 | Msa0660300 | 0.821121 | 4.778693e-53 | -8.615850e-47 |
| Msa0491520 | Msa0662650 | 0.829604 | 4.690201e-55 | -8.615850e-47 |
| Msa0491520 | Msa0677270 | 0.812578 | 3.951525e-51 | -8.615850e-47 |
| Msa0491520 | Msa0679550 | 0.862686 | 4.251096e-64 | -8.615850e-47 |
| Msa0491520 | Msa0682950 | 0.805207 | 1.492380e-49 | -8.615850e-47 |
| Msa0491520 | Msa0694250 | 0.846705 | 1.836908e-59 | -8.615850e-47 |
| Msa0491520 | Msa0708860 | 0.829386 | 5.300137e-55 | -8.615850e-47 |
| Msa0491520 | Msa0715110 | 0.806566 | 7.730386e-50 | -8.615850e-47 |
| Msa0491520 | Msa0724560 | 0.815894 | 7.316854e-52 | -8.615850e-47 |
| Msa0491520 | Msa0724950 | 0.810369 | 1.192845e-50 | -8.615850e-47 |
| Msa0491520 | Msa0731180 | 0.809664 | 1.691981e-50 | -8.615850e-47 |
| Msa0491520 | Msa0731710 | 0.800121 | 1.671816e-48 | -8.615850e-47 |
| Msa0491520 | Msa0735160 | 0.801537 | 8.592102e-49 | -8.615850e-47 |
| Msa0491520 | Msa0743120 | -0.819511 | 1.117975e-52 | -8.615850e-47 |
| Msa0491520 | Msa0751210 | 0.830041 | 3.670905e-55 | -8.615850e-47 |
| Msa0491520 | Msa0756310 | 0.808597 | 2.863814e-50 | -8.615850e-47 |
| Msa0491520 | Msa0757050 | 0.824444 | 8.043881e-54 | -8.615850e-47 |
| Msa0491520 | Msa0757080 | 0.806499 | 7.985233e-50 | -8.615850e-47 |
| Msa0491520 | Msa0763080 | 0.814449 | 1.531861e-51 | -8.615850e-47 |
| Msa0491520 | Msa0792090 | 0.822740 | 2.015580e-53 | -8.615850e-47 |
| Msa0491520 | Msa0794320 | 0.810778 | 9.731903e-51 | -8.615850e-47 |
| Msa0491520 | Msa0798030 | 0.817748 | 2.807676e-52 | -8.615850e-47 |
| Msa0491520 | Msa0799060 | 0.813885 | 2.040285e-51 | -8.615850e-47 |
| Msa0491520 | Msa0818110 | 0.814975 | 1.171519e-51 | -8.615850e-47 |
| Msa0491520 | Msa0820530 | -0.804424 | 2.175036e-49 | -8.615850e-47 |
| Msa0491520 | Msa0827470 | 0.915127 | 8.510827e-85 | -8.615850e-47 |
| Msa0491520 | Msa0831590 | 0.818491 | 1.906199e-52 | -8.615850e-47 |
| Msa0491520 | Msa0834450 | 0.801527 | 8.635582e-49 | -8.615850e-47 |
| Msa0491520 | Msa0835730 | 0.808469 | 3.051004e-50 | -8.615850e-47 |
| Msa0491520 | Msa0845070 | 0.824158 | 9.393724e-54 | -8.615850e-47 |
| Msa0491520 | Msa0848900 | 0.811139 | 8.127544e-51 | -8.615850e-47 |
| Msa0491520 | Msa0860410 | 0.803486 | 3.407544e-49 | -8.615850e-47 |
| Msa0491520 | Msa0864470 | -0.828888 | 6.998723e-55 | -8.615850e-47 |
| Msa0491520 | Msa0876360 | 0.800057 | 1.723041e-48 | -8.615850e-47 |
| Msa0491520 | Msa0891600 | -0.806125 | 9.575986e-50 | -8.615850e-47 |
| Msa0491520 | Msa0899230 | 0.821124 | 4.770294e-53 | -8.615850e-47 |
| Msa0491520 | Msa0908170 | 0.865245 | 6.789653e-65 | -8.615850e-47 |
| Msa0491520 | Msa0910980 | -0.832178 | 1.096387e-55 | -8.615850e-47 |
| Msa0491520 | Msa0927670 | 0.817113 | 3.902537e-52 | -8.615850e-47 |
| Msa0491520 | Msa0944730 | 0.813472 | 2.516182e-51 | -8.615850e-47 |
| Msa0491520 | Msa0945100 | 0.805664 | 1.196799e-49 | -8.615850e-47 |
| Msa0491520 | Msa0946080 | 0.820715 | 5.923473e-53 | -8.615850e-47 |
| Msa0491520 | Msa0946690 | -0.801552 | 8.531111e-49 | -8.615850e-47 |
| Msa0491520 | Msa0959010 | 0.830569 | 2.727750e-55 | -8.615850e-47 |
| Msa0491520 | Msa0960160 | 0.833808 | 4.310597e-56 | -8.615850e-47 |
| Msa0491520 | Msa0961420 | -0.811781 | 5.896738e-51 | -8.615850e-47 |
| Msa0491520 | Msa0961490 | 0.800065 | 1.716676e-48 | -8.615850e-47 |
| Msa0491520 | Msa0964130 | 0.812332 | 4.472666e-51 | -8.615850e-47 |
| Msa0491520 | Msa0965520 | 0.821964 | 3.050938e-53 | -8.615850e-47 |
| Msa0491520 | Msa0978700 | 0.802175 | 6.356190e-49 | -8.615850e-47 |
| Msa0491520 | Msa0982270 | 0.860150 | 2.523621e-63 | -8.615850e-47 |
| Msa0491520 | Msa0990960 | 0.805862 | 1.087640e-49 | -8.615850e-47 |
| Msa0491520 | Msa0992490 | -0.822164 | 2.742769e-53 | -8.615850e-47 |
| Msa0491520 | Msa0993530 | 0.829859 | 4.065366e-55 | -8.615850e-47 |
| Msa0491520 | Msa0999040 | 0.823718 | 1.191097e-53 | -8.615850e-47 |
| Msa0491520 | Msa0999960 | -0.813387 | 2.626266e-51 | -8.615850e-47 |
| Msa0491520 | Msa1006850 | 0.815208 | 1.039962e-51 | -8.615850e-47 |
| Msa0491520 | Msa1015060 | 0.802243 | 6.154102e-49 | -8.615850e-47 |
| Msa0491520 | Msa1021510 | 0.803124 | 4.048411e-49 | -8.615850e-47 |
| Msa0491520 | Msa1026760 | 0.804899 | 1.731281e-49 | -8.615850e-47 |
| Msa0491520 | Msa1029080 | -0.808303 | 3.309239e-50 | -8.615850e-47 |
| Msa0491520 | Msa1033410 | -0.807742 | 4.355782e-50 | -8.615850e-47 |
| Msa0491520 | Msa1037700 | -0.839562 | 1.471633e-57 | -8.615850e-47 |
| Msa0491520 | Msa1039880 | 0.841357 | 4.990057e-58 | -8.615850e-47 |
| Msa0491520 | Msa1047720 | 0.825057 | 5.769362e-54 | -8.615850e-47 |
| Msa0491520 | Msa1072460 | -0.809256 | 2.069631e-50 | -8.615850e-47 |
| Msa0491520 | Msa1073070 | -0.826465 | 2.673042e-54 | -8.615850e-47 |
| Msa0491520 | Msa1092090 | 0.856980 | 2.229038e-62 | -8.615850e-47 |
| Msa0491520 | Msa1092820 | 0.812248 | 4.664251e-51 | -8.615850e-47 |
| Msa0491520 | Msa1109820 | 0.822848 | 1.901575e-53 | -8.615850e-47 |
| Msa0491520 | Msa1118110 | 0.801600 | 8.341002e-49 | -8.615850e-47 |
| Msa0491520 | Msa1120620 | 0.805569 | 1.252892e-49 | -8.615850e-47 |
| Msa0491520 | Msa1130210 | -0.842887 | 1.965493e-58 | -8.615850e-47 |
| Msa0491520 | Msa1130270 | -0.807247 | 5.547558e-50 | -8.615850e-47 |
| Msa0491520 | Msa1135880 | 0.820287 | 7.428438e-53 | -8.615850e-47 |
| Msa0491520 | Msa1156170 | -0.800938 | 1.139351e-48 | -8.615850e-47 |
| Msa0491520 | Msa1157020 | 0.847395 | 1.188034e-59 | -8.615850e-47 |
| Msa0491520 | Msa1164020 | 0.800333 | 1.513629e-48 | -8.615850e-47 |
| Msa0491520 | Msa1168040 | -0.810671 | 1.026575e-50 | -8.615850e-47 |
| Msa0491520 | Msa1172230 | 0.803856 | 2.854486e-49 | -8.615850e-47 |
| Msa0491520 | Msa1174310 | 0.845267 | 4.517986e-59 | -8.615850e-47 |
| Msa0491520 | Msa1207460 | -0.844695 | 6.447241e-59 | -8.615850e-47 |
| Msa0491520 | Msa1214880 | 0.825093 | 5.654889e-54 | -8.615850e-47 |
| Msa0491520 | Msa1217430 | -0.808049 | 3.748016e-50 | -8.615850e-47 |
| Msa0491520 | Msa1217810 | 0.820617 | 6.241275e-53 | -8.615850e-47 |
| Msa0491520 | Msa1217830 | 0.808317 | 3.286749e-50 | -8.615850e-47 |
| Msa0491520 | Msa1218650 | 0.817501 | 3.190874e-52 | -8.615850e-47 |
| Msa0491520 | Msa1219520 | 0.820821 | 5.601376e-53 | -8.615850e-47 |
| Msa0491520 | Msa1222280 | 0.816078 | 6.655304e-52 | -8.615850e-47 |
| Msa0491520 | Msa1228160 | -0.863348 | 2.654566e-64 | -8.615850e-47 |
| Msa0491520 | Msa1229610 | 0.816021 | 6.852642e-52 | -8.615850e-47 |
| Msa0491520 | Msa1229850 | 0.818431 | 1.967460e-52 | -8.615850e-47 |
| Msa0491520 | Msa1233500 | 0.841435 | 4.760083e-58 | -8.615850e-47 |
| Msa0491520 | Msa1235400 | 0.831360 | 1.745118e-55 | -8.615850e-47 |
| Msa0491520 | Msa1236070 | -0.853629 | 2.105565e-61 | -8.615850e-47 |
| Msa0491520 | Msa1249920 | 0.833298 | 5.779147e-56 | -8.615850e-47 |
| Msa0491520 | Msa1258380 | -0.801625 | 8.242114e-49 | -8.615850e-47 |
| Msa0491520 | Msa1263290 | -0.814024 | 1.902017e-51 | -8.615850e-47 |
| Msa0491520 | Msa1267260 | 0.813195 | 2.893965e-51 | -8.615850e-47 |
| Msa0491520 | Msa1272320 | 0.808618 | 2.835499e-50 | -8.615850e-47 |
| Msa0491520 | Msa1276440 | 0.815873 | 7.394972e-52 | -8.615850e-47 |
| Msa0491520 | Msa1282920 | 0.806867 | 6.678371e-50 | -8.615850e-47 |
| Msa0491520 | Msa1291350 | 0.808509 | 2.990657e-50 | -8.615850e-47 |
| Msa0491520 | Msa1300350 | -0.825527 | 4.466346e-54 | -8.615850e-47 |
| Msa0491520 | Msa1300860 | 0.826600 | 2.481925e-54 | -8.615850e-47 |
| Msa0491520 | Msa1302190 | -0.811781 | 5.896738e-51 | -8.615850e-47 |
| Msa0491520 | Msa1306750 | 0.846196 | 2.527553e-59 | -8.615850e-47 |
| Msa0491520 | Msa1307740 | 0.861345 | 1.094812e-63 | -8.615850e-47 |
| Msa0491520 | Msa1308330 | -0.824931 | 6.178599e-54 | -8.615850e-47 |
| Msa0491520 | Msa1310220 | 0.814757 | 1.309219e-51 | -8.615850e-47 |
| Msa0491520 | Msa1314770 | 0.859010 | 5.557664e-63 | -8.615850e-47 |
| Msa0491520 | Msa1322190 | 0.845084 | 5.061997e-59 | -8.615850e-47 |
| Msa0491520 | Msa1331920 | 0.825139 | 5.516738e-54 | -8.615850e-47 |
| Msa0491520 | Msa1338250 | 0.800867 | 1.178137e-48 | -8.615850e-47 |
| Msa0491520 | Msa1350690 | 0.850548 | 1.581694e-60 | -8.615850e-47 |
| Msa0491520 | Msa1359650 | -0.803185 | 3.933175e-49 | -8.615850e-47 |
| Msa0491520 | Msa1360280 | 0.830090 | 3.570775e-55 | -8.615850e-47 |
| Msa0491520 | Msa1363700 | 0.827268 | 1.718298e-54 | -8.615850e-47 |
| Msa0491520 | Msa1369530 | 0.813742 | 2.194228e-51 | -8.615850e-47 |
| Msa0491520 | Msa1371090 | 0.834318 | 3.211829e-56 | -8.615850e-47 |
| Msa0491520 | Msa1373350 | 0.846066 | 2.742213e-59 | -8.615850e-47 |
| Msa0491520 | Msa1379710 | 0.810683 | 1.020296e-50 | -8.615850e-47 |
| Msa0491520 | Msa1383480 | 0.815470 | 9.096312e-52 | -8.615850e-47 |
| Msa0491520 | Msa1393040 | 0.819805 | 9.577500e-53 | -8.615850e-47 |
| Msa0491520 | Msa1403580 | -0.802426 | 5.642314e-49 | -8.615850e-47 |
| Msa0491520 | Msa1404670 | 0.812824 | 3.490526e-51 | -8.615850e-47 |
| Msa0491520 | Msa1409350 | 0.814065 | 1.862596e-51 | -8.615850e-47 |
| Msa0491520 | Msa1415130 | 0.806823 | 6.822209e-50 | -8.615850e-47 |
| Msa0491520 | Msa1417810 | -0.806451 | 8.175968e-50 | -8.615850e-47 |
| Msa0491520 | Msa1417830 | -0.825441 | 4.680475e-54 | -8.615850e-47 |
| Msa0491520 | Msa1419110 | 0.821460 | 3.989857e-53 | -8.615850e-47 |
| Msa0491520 | Msa1422840 | 0.829619 | 4.651133e-55 | -8.615850e-47 |
| Msa0491520 | Msa1438700 | 0.800060 | 1.720681e-48 | -8.615850e-47 |
| Msa0491520 | Msa1439230 | 0.817211 | 3.709287e-52 | -8.615850e-47 |
| Msa0491520 | Msa1439960 | 0.807976 | 3.884989e-50 | -8.615850e-47 |
| Msa0491520 | Msa1440600 | 0.819982 | 8.725989e-53 | -8.615850e-47 |
| Msa0491520 | Msa1441190 | 0.808910 | 2.454709e-50 | -8.615850e-47 |
| Msa0491520 | Msa1442220 | -0.802653 | 5.065157e-49 | -8.615850e-47 |
| Msa0491520 | Msa1443290 | -0.809493 | 1.841744e-50 | -8.615850e-47 |
| Msa0491520 | Msa1444250 | -0.814918 | 1.206315e-51 | -8.615850e-47 |
| Msa0491520 | Msa1445030 | 0.811464 | 6.910816e-51 | -8.615850e-47 |
| Msa0491520 | Msa1445400 | -0.808020 | 3.801752e-50 | -8.615850e-47 |
| Msa0491520 | Msa1445420 | -0.830942 | 2.210638e-55 | -8.615850e-47 |
| Msa0491520 | Msa1449350 | -0.806781 | 6.961404e-50 | -8.615850e-47 |
| Msa0491520 | Msa1451620 | -0.815773 | 7.786836e-52 | -8.615850e-47 |
| Msa0491520 | Msa1455390 | 0.812907 | 3.346831e-51 | -8.615850e-47 |
| Msa0491520 | Msa1459760 | -0.836554 | 8.744936e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491520 | MtrunA17_Chr3g0083531 | 96.466 | 283 | 8 | 1 | 1 | 281 | 1 | 283 | 0.0 | 553 |
| Msa0491520 | MtrunA17_Chr8g0352771 | 52.852 | 263 | 103 | 3 | 2 | 261 | 13 | 257 | 6.18e-87 | 259 |
| Msa0491520 | MtrunA17_Chr7g0256501 | 63.816 | 152 | 54 | 1 | 108 | 258 | 273 | 424 | 3.01e-69 | 220 |
| Msa0491520 | MtrunA17_Chr1g0171871 | 60.000 | 160 | 55 | 1 | 108 | 258 | 204 | 363 | 9.72e-67 | 212 |
| Msa0491520 | MtrunA17_Chr3g0105871 | 49.351 | 154 | 75 | 3 | 108 | 260 | 83 | 234 | 1.28e-49 | 164 |
| Msa0491520 | MtrunA17_Chr5g0437471 | 53.061 | 147 | 67 | 2 | 112 | 258 | 94 | 238 | 3.98e-49 | 163 |
| Msa0491520 | MtrunA17_Chr5g0431071 | 41.014 | 217 | 105 | 5 | 60 | 258 | 42 | 253 | 9.42e-47 | 157 |
| Msa0491520 | MtrunA17_Chr3g0113971 | 51.389 | 144 | 68 | 2 | 115 | 258 | 93 | 234 | 2.52e-45 | 153 |
| Msa0491520 | MtrunA17_Chr7g0266401 | 45.946 | 148 | 78 | 1 | 111 | 258 | 259 | 404 | 1.09e-40 | 145 |
| Msa0491520 | MtrunA17_Chr1g0196971 | 46.309 | 149 | 78 | 2 | 111 | 259 | 223 | 369 | 5.62e-40 | 142 |
| Msa0491520 | MtrunA17_Chr7g0267591 | 45.513 | 156 | 74 | 3 | 113 | 259 | 126 | 279 | 6.38e-40 | 140 |
| Msa0491520 | MtrunA17_Chr8g0388481 | 45.223 | 157 | 77 | 3 | 110 | 258 | 212 | 367 | 1.16e-36 | 134 |
| Msa0491520 | MtrunA17_Chr8g0392761 | 45.161 | 155 | 80 | 2 | 110 | 259 | 120 | 274 | 2.06e-36 | 130 |
| Msa0491520 | MtrunA17_Chr7g0217121 | 44.242 | 165 | 73 | 3 | 113 | 258 | 267 | 431 | 3.16e-35 | 131 |
| Msa0491520 | MtrunA17_Chr6g0453031 | 42.197 | 173 | 80 | 6 | 106 | 258 | 250 | 422 | 1.76e-34 | 129 |
| Msa0491520 | MtrunA17_Chr3g0089011 | 37.255 | 153 | 78 | 3 | 125 | 259 | 2 | 154 | 1.40e-23 | 94.0 |
| Msa0491520 | MtrunA17_Chr5g0412021 | 35.484 | 93 | 53 | 2 | 153 | 238 | 1 | 93 | 9.38e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0491520 | AT5G13810.1 | 56.420 | 257 | 103 | 5 | 6 | 259 | 23 | 273 | 7.00e-95 | 281 |
| Msa0491520 | AT2G41330.1 | 56.442 | 163 | 69 | 2 | 98 | 258 | 239 | 401 | 2.04e-55 | 184 |
| Msa0491520 | AT3G57070.1 | 44.215 | 242 | 127 | 3 | 20 | 258 | 179 | 415 | 8.40e-55 | 183 |
| Msa0491520 | AT5G58530.1 | 42.922 | 219 | 105 | 6 | 54 | 259 | 55 | 266 | 1.35e-49 | 165 |
| Msa0491520 | AT5G39865.1 | 48.780 | 164 | 66 | 6 | 113 | 258 | 225 | 388 | 2.70e-42 | 149 |
| Msa0491520 | AT5G06470.1 | 41.618 | 173 | 86 | 4 | 99 | 259 | 70 | 239 | 7.76e-41 | 141 |
| Msa0491520 | AT3G28850.1 | 42.614 | 176 | 71 | 3 | 113 | 258 | 251 | 426 | 1.70e-38 | 140 |
| Msa0491520 | AT4G10630.1 | 46.584 | 161 | 74 | 4 | 111 | 259 | 174 | 334 | 2.24e-38 | 137 |
| Msa0491520 | AT1G32760.1 | 49.689 | 161 | 73 | 4 | 107 | 259 | 154 | 314 | 2.35e-38 | 137 |
| Msa0491520 | AT3G11773.1 | 46.479 | 142 | 73 | 3 | 118 | 259 | 12 | 150 | 4.46e-36 | 126 |
| Msa0491520 | AT5G03870.1 | 44.667 | 150 | 82 | 1 | 111 | 259 | 235 | 384 | 2.10e-35 | 131 |
| Msa0491520 | AT1G64500.1 | 43.421 | 152 | 78 | 3 | 115 | 258 | 214 | 365 | 3.12e-34 | 127 |
| Msa0491520 | AT5G01420.1 | 43.333 | 150 | 82 | 3 | 111 | 259 | 254 | 401 | 6.53e-32 | 122 |
| Msa0491520 | AT3G11773.2 | 47.321 | 112 | 56 | 3 | 148 | 259 | 92 | 200 | 5.94e-26 | 101 |
Find 75 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAGGGTTTAGGGTTT+GGG | 0.218316 | 3_4:+14266949 | Msa0491520:CDS |
| ATCAGAGAATAGGAGGAAAA+AGG | 0.262644 | 3_4:-14268730 | None:intergenic |
| TGTCCTTGTTGCGCCTGTTC+TGG | 0.268180 | 3_4:+14268362 | Msa0491520:CDS |
| GTTGTTGTTGTTTATGTAGT+TGG | 0.286184 | 3_4:-14266222 | None:intergenic |
| TTATATTACAGAAGCGATTA+TGG | 0.292045 | 3_4:+14268501 | Msa0491520:three_prime_UTR |
| ATTAAACATAACTGCAAAAC+TGG | 0.316340 | 3_4:+14268619 | Msa0491520:three_prime_UTR |
| CCACGCGCGGCTTCGAAGTT+AGG | 0.341040 | 3_4:+14266782 | Msa0491520:CDS |
| ATGAAAAGGGTATGTTGTTT+CGG | 0.362170 | 3_4:+14266834 | Msa0491520:CDS |
| CTGCCTCAAGTGTTCGTTAG+AGG | 0.365217 | 3_4:+14268113 | Msa0491520:CDS |
| AGGATTTGAAAGAAAGAAGT+TGG | 0.382704 | 3_4:-14266255 | None:intergenic |
| AACAAAGCCGGGCTTCATCT+TGG | 0.384748 | 3_4:-14268213 | None:intergenic |
| ATCAAATCTCTATTTGAAAC+TGG | 0.396457 | 3_4:+14268161 | Msa0491520:CDS |
| TGCTTTCAGAAAAGAATTGC+AGG | 0.412980 | 3_4:+14267000 | Msa0491520:CDS |
| TTGAAACTGGTGAATTGAAA+AGG | 0.417136 | 3_4:+14268174 | Msa0491520:CDS |
| TTAGGTCAGAAGCCGCGTTC+TGG | 0.417750 | 3_4:+14266800 | Msa0491520:CDS |
| TGATGAAAGAGATGTTTCTA+TGG | 0.421139 | 3_4:+14266973 | Msa0491520:CDS |
| CGGTCTAGAAATTCGTTGAA+TGG | 0.435296 | 3_4:-14266605 | None:intergenic |
| ACAAAGCCGGGCTTCATCTT+GGG | 0.437737 | 3_4:-14268212 | None:intergenic |
| TCAGAAGCCGCGTTCTGGTT+CGG | 0.442103 | 3_4:+14266805 | Msa0491520:CDS |
| GGGTATGTTGTTTCGGTTGG+CGG | 0.446125 | 3_4:+14266841 | Msa0491520:CDS |
| ATCCTTTATATTGTAAAATG+AGG | 0.451193 | 3_4:+14268430 | Msa0491520:exon |
| GCCGCGCGTGGTTCAGAAGA+AGG | 0.453907 | 3_4:-14266770 | None:intergenic |
| AAGCAAATTCTACGGTTCAA+TGG | 0.458730 | 3_4:+14266640 | Msa0491520:CDS |
| TAAACACAACATCAGAGAAT+AGG | 0.459389 | 3_4:-14268740 | None:intergenic |
| AGGGATAAGAAGAACGTTTG+AGG | 0.460025 | 3_4:+14266904 | Msa0491520:CDS |
| CAACTCTCGCAAACAAAGCC+GGG | 0.460905 | 3_4:-14268224 | None:intergenic |
| GCGAGAGTTGTGGCGATGCT+AGG | 0.463600 | 3_4:+14268237 | Msa0491520:CDS |
| ACAACTCTCGCAAACAAAGC+CGG | 0.469766 | 3_4:-14268225 | None:intergenic |
| ACAGAACATCATTCCAGAAC+AGG | 0.474894 | 3_4:-14268375 | None:intergenic |
| TGGTTCGGAAGAAGATGAAA+AGG | 0.475046 | 3_4:+14266820 | Msa0491520:CDS |
| ATTGTTGCTGCAGTCTGTGA+TGG | 0.475824 | 3_4:+14268073 | Msa0491520:intron |
| AAATTATTTGATGAGGATGA+AGG | 0.476639 | 3_4:+14268293 | Msa0491520:CDS |
| GTAGAATTTGCTTAACGAAC+CGG | 0.485771 | 3_4:-14266630 | None:intergenic |
| ATCATCTTTACGTGGAAGAA+TGG | 0.487437 | 3_4:+14266673 | Msa0491520:CDS |
| AAAGGGTATGTTGTTTCGGT+TGG | 0.494457 | 3_4:+14266838 | Msa0491520:CDS |
| ACAAAACAAAACGATGTTCA+AGG | 0.501444 | 3_4:-14268566 | None:intergenic |
| GAATTGAAAAGGATTCTTGA+AGG | 0.524790 | 3_4:+14268185 | Msa0491520:CDS |
| TGCTTGGAGTGCAATGAGAA+TGG | 0.530091 | 3_4:+14268329 | Msa0491520:CDS |
| GATAATTCTTTCGTCGTCGG+TGG | 0.531852 | 3_4:-14266725 | None:intergenic |
| CTATAGATAATGATAAAGAA+TGG | 0.531876 | 3_4:+14268695 | Msa0491520:three_prime_UTR |
| AACGAATTTCTAGACCGGTC+CGG | 0.532633 | 3_4:+14266611 | Msa0491520:CDS |
| GTGAGAATTGCAGTGGGAGT+AGG | 0.533959 | 3_4:+14268270 | Msa0491520:CDS |
| GGCTTTGTTTGCGAGAGTTG+TGG | 0.540749 | 3_4:+14268227 | Msa0491520:CDS |
| AGGTTTGTTGAAAAGATGCT+TGG | 0.548744 | 3_4:+14268313 | Msa0491520:CDS |
| ATTTGCTTAACGAACCGGAC+CGG | 0.549932 | 3_4:-14266625 | None:intergenic |
| GGTTGGCGGATGCTGATGAT+CGG | 0.555952 | 3_4:+14266855 | Msa0491520:CDS |
| GATGATAATTCTTTCGTCGT+CGG | 0.563554 | 3_4:-14266728 | None:intergenic |
| TGTATTTGACGAGTTTGAGA+GGG | 0.565359 | 3_4:+14266885 | Msa0491520:CDS |
| GGTTCGGAAGAAGATGAAAA+GGG | 0.565516 | 3_4:+14266821 | Msa0491520:CDS |
| ACACAACATCAGAGAATAGG+AGG | 0.569408 | 3_4:-14268737 | None:intergenic |
| GTTAGAGGAAAGTACATTGG+TGG | 0.572212 | 3_4:+14268128 | Msa0491520:CDS |
| TTGTTGCTGCAGTCTGTGAT+GGG | 0.579187 | 3_4:+14268074 | Msa0491520:intron |
| GGTTCGTTAAGCAAATTCTA+CGG | 0.596106 | 3_4:+14266632 | Msa0491520:CDS |
| TTCGTTAGAGGAAAGTACAT+TGG | 0.597968 | 3_4:+14268125 | Msa0491520:CDS |
| TCTTCTTCCGAACCAGAACG+CGG | 0.600432 | 3_4:-14266812 | None:intergenic |
| ACGTGTGCATCGTGTTTGAT+CGG | 0.601162 | 3_4:-14266559 | None:intergenic |
| GTGTATTTGACGAGTTTGAG+AGG | 0.605361 | 3_4:+14266884 | Msa0491520:CDS |
| GAGTAGGAAATTATTTGATG+AGG | 0.607522 | 3_4:+14268286 | Msa0491520:CDS |
| AAGCGATTATGGTTGCAGCC+CGG | 0.607773 | 3_4:+14268512 | Msa0491520:three_prime_UTR |
| CATTCAACGAATTTCTAGAC+CGG | 0.610493 | 3_4:+14266606 | Msa0491520:CDS |
| CTCCCACTGCAATTCTCACA+AGG | 0.613824 | 3_4:-14268266 | None:intergenic |
| CCTAACTTCGAAGCCGCGCG+TGG | 0.614365 | 3_4:-14266782 | None:intergenic |
| TACCTTGTGAGAATTGCAGT+GGG | 0.615095 | 3_4:+14268264 | Msa0491520:CDS |
| ATACCTTGTGAGAATTGCAG+TGG | 0.616068 | 3_4:+14268263 | Msa0491520:CDS |
| ACCTTCTTCTGAACCACGCG+CGG | 0.621979 | 3_4:+14266769 | Msa0491520:CDS |
| ATTCCAGAACAGGCGCAACA+AGG | 0.629811 | 3_4:-14268365 | None:intergenic |
| GGATGCTGATGATCGGATTG+TGG | 0.634382 | 3_4:+14266862 | Msa0491520:CDS |
| GCTGCAGTCTGTGATGGGTG+AGG | 0.646757 | 3_4:+14268079 | Msa0491520:intron |
| TTTCCTCTAACGAACACTTG+AGG | 0.653351 | 3_4:-14268116 | None:intergenic |
| AAAGAGTGAAATGAAATGTG+TGG | 0.656253 | 3_4:-14266278 | None:intergenic |
| GCAATGAGAATGGACTTGTA+AGG | 0.683440 | 3_4:+14268339 | Msa0491520:CDS |
| TTCTGTGATTATGAAAACGA+GGG | 0.684559 | 3_4:+14268392 | Msa0491520:CDS |
| GAGTGAAATGAAATGTGTGG+AGG | 0.701200 | 3_4:-14266275 | None:intergenic |
| TCAATGAAATCATCTTTACG+TGG | 0.737140 | 3_4:+14266665 | Msa0491520:CDS |
| GTTCTGTGATTATGAAAACG+AGG | 0.755355 | 3_4:+14268391 | Msa0491520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTGTTTTTGTTTA+TGG | - | chr3_4:14266375-14266394 | None:intergenic | 10.0% |
| !!! | TTGGATTTATTTTTTTATTT+TGG | - | chr3_4:14267417-14267436 | None:intergenic | 10.0% |
| !!! | TTTTTTTTACTAGAAAAAAA+GGG | - | chr3_4:14267442-14267461 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTACTAGAAAAAA+AGG | - | chr3_4:14267443-14267462 | None:intergenic | 10.0% |
| !! | TATAAAATTATGTTCTATAT+TGG | - | chr3_4:14267970-14267989 | None:intergenic | 10.0% |
| !!! | ATATCCATGATTTTTTTTTT+TGG | + | chr3_4:14267286-14267305 | Msa0491520:intron | 15.0% |
| !!! | AATATTTACTGATTTAAAGA+TGG | + | chr3_4:14267346-14267365 | Msa0491520:intron | 15.0% |
| !!! | TTTTTTCTGTTTGCAATATT+TGG | - | chr3_4:14266398-14266417 | None:intergenic | 20.0% |
| !! | AACATAATCATACAAGATAT+CGG | - | chr3_4:14267216-14267235 | None:intergenic | 20.0% |
| !!! | GTTACAATTTTTTTAACGTA+TGG | + | chr3_4:14267368-14267387 | Msa0491520:intron | 20.0% |
| !! | ACTTTAAATGTAGAATTTAG+AGG | - | chr3_4:14267570-14267589 | None:intergenic | 20.0% |
| !!! | TACATTTAAAGTTTTCTTGA+TGG | + | chr3_4:14267578-14267597 | Msa0491520:intron | 20.0% |
| !! | ATCCTTTATATTGTAAAATG+AGG | + | chr3_4:14268430-14268449 | Msa0491520:exon | 20.0% |
| !! | CTATAGATAATGATAAAGAA+TGG | + | chr3_4:14268695-14268714 | Msa0491520:three_prime_UTR | 20.0% |
| !!! | TTTGTTTTTGTTTATGGCTA+TGG | - | chr3_4:14266369-14266388 | None:intergenic | 25.0% |
| !!! | CTGTTAAGATGATTTTGAAA+GGG | + | chr3_4:14266936-14266955 | Msa0491520:CDS | 25.0% |
| ! | AAAAAGAACAAGAAGAAAGA+AGG | - | chr3_4:14267033-14267052 | None:intergenic | 25.0% |
| !! | TGTTCTTTTTATGACATGTA+CGG | + | chr3_4:14267043-14267062 | Msa0491520:intron | 25.0% |
| ! | AACATGATAATACAGAATCA+CGG | - | chr3_4:14267115-14267134 | None:intergenic | 25.0% |
| ! | ACATGCATTAAGATAATTGT+GGG | - | chr3_4:14267164-14267183 | None:intergenic | 25.0% |
| ! | AACATGCATTAAGATAATTG+TGG | - | chr3_4:14267165-14267184 | None:intergenic | 25.0% |
| ! | CAGACCAAAAAAAAAAATCA+TGG | - | chr3_4:14267293-14267312 | None:intergenic | 25.0% |
| !!! | CATGATTTTTTTTTTTGGTC+TGG | + | chr3_4:14267291-14267310 | Msa0491520:intron | 25.0% |
| ! | TTACTAGAAAAAAAGGGAAT+TGG | - | chr3_4:14267436-14267455 | None:intergenic | 25.0% |
| !!! | AATGTCCCAATTTTTTTTTC+TGG | + | chr3_4:14267461-14267480 | Msa0491520:intron | 25.0% |
| ! | GAAGACCAGAAAAAAAAATT+GGG | - | chr3_4:14267469-14267488 | None:intergenic | 25.0% |
| ! | AGAAGACCAGAAAAAAAAAT+TGG | - | chr3_4:14267470-14267489 | None:intergenic | 25.0% |
| ! | TAATTGTTGATGCACAATAA+AGG | + | chr3_4:14267537-14267556 | Msa0491520:intron | 25.0% |
| ! | AATTCAGCAAAATCGATATA+TGG | - | chr3_4:14267624-14267643 | None:intergenic | 25.0% |
| ! | AAATAGAAAAGCTATGAACT+AGG | + | chr3_4:14267734-14267753 | Msa0491520:intron | 25.0% |
| ! | AATAGAAAAGCTATGAACTA+GGG | + | chr3_4:14267735-14267754 | Msa0491520:intron | 25.0% |
| !! | ATCAAATCTCTATTTGAAAC+TGG | + | chr3_4:14268161-14268180 | Msa0491520:CDS | 25.0% |
| ! | AAATTATTTGATGAGGATGA+AGG | + | chr3_4:14268293-14268312 | Msa0491520:CDS | 25.0% |
| !! | TGCCTCATTTTACAATATAA+AGG | - | chr3_4:14268435-14268454 | None:intergenic | 25.0% |
| ! | TTATATTACAGAAGCGATTA+TGG | + | chr3_4:14268501-14268520 | Msa0491520:three_prime_UTR | 25.0% |
| ! | ATTAAACATAACTGCAAAAC+TGG | + | chr3_4:14268619-14268638 | Msa0491520:three_prime_UTR | 25.0% |
| !! | GTTGTTGTTGTTTATGTAGT+TGG | - | chr3_4:14266225-14266244 | None:intergenic | 30.0% |
| AGGATTTGAAAGAAAGAAGT+TGG | - | chr3_4:14266258-14266277 | None:intergenic | 30.0% | |
| AAAGAGTGAAATGAAATGTG+TGG | - | chr3_4:14266281-14266300 | None:intergenic | 30.0% | |
| !!! | GGAATTTTTTGTTTCTGTTG+AGG | - | chr3_4:14266348-14266367 | None:intergenic | 30.0% |
| TCAATGAAATCATCTTTACG+TGG | + | chr3_4:14266665-14266684 | Msa0491520:CDS | 30.0% | |
| ! | ATGAAAAGGGTATGTTGTTT+CGG | + | chr3_4:14266834-14266853 | Msa0491520:CDS | 30.0% |
| ! | GCTGTTAAGATGATTTTGAA+AGG | + | chr3_4:14266935-14266954 | Msa0491520:CDS | 30.0% |
| !! | AGATGATTTTGAAAGGGTTT+AGG | + | chr3_4:14266942-14266961 | Msa0491520:CDS | 30.0% |
| !! | GATGATTTTGAAAGGGTTTA+GGG | + | chr3_4:14266943-14266962 | Msa0491520:CDS | 30.0% |
| ! | TGATGAAAGAGATGTTTCTA+TGG | + | chr3_4:14266973-14266992 | Msa0491520:CDS | 30.0% |
| TGATGTTACGATAGATATGT+CGG | + | chr3_4:14267185-14267204 | Msa0491520:intron | 30.0% | |
| TTAACGTATGGTGAAAAATG+AGG | + | chr3_4:14267380-14267399 | Msa0491520:intron | 30.0% | |
| TAACGTATGGTGAAAAATGA+GGG | + | chr3_4:14267381-14267400 | Msa0491520:intron | 30.0% | |
| !! | CGATTTGATTTTAGTAGACA+GGG | + | chr3_4:14267492-14267511 | Msa0491520:intron | 30.0% |
| !!! | AGGGTTTTAAATTGTTCTTG+TGG | + | chr3_4:14267511-14267530 | Msa0491520:intron | 30.0% |
| !! | GTTTTAAATTGTTCTTGTGG+TGG | + | chr3_4:14267514-14267533 | Msa0491520:intron | 30.0% |
| GATCAAGATTAGACAACTAA+AGG | - | chr3_4:14267668-14267687 | None:intergenic | 30.0% | |
| ATGAACTAGGGAAATTGATT+TGG | + | chr3_4:14267747-14267766 | Msa0491520:intron | 30.0% | |
| TCTGATATCAAATTATCAGC+AGG | + | chr3_4:14267861-14267880 | Msa0491520:intron | 30.0% | |
| TTGAAACTGGTGAATTGAAA+AGG | + | chr3_4:14268174-14268193 | Msa0491520:CDS | 30.0% | |
| GAATTGAAAAGGATTCTTGA+AGG | + | chr3_4:14268185-14268204 | Msa0491520:CDS | 30.0% | |
| GAGTAGGAAATTATTTGATG+AGG | + | chr3_4:14268286-14268305 | Msa0491520:CDS | 30.0% | |
| TTCTGTGATTATGAAAACGA+GGG | + | chr3_4:14268392-14268411 | Msa0491520:CDS | 30.0% | |
| !!! | ACTGTCATGGTTTTAAATTC+CGG | - | chr3_4:14268534-14268553 | None:intergenic | 30.0% |
| ACAAAACAAAACGATGTTCA+AGG | - | chr3_4:14268569-14268588 | None:intergenic | 30.0% | |
| TAAACACAACATCAGAGAAT+AGG | - | chr3_4:14268743-14268762 | None:intergenic | 30.0% | |
| ! | CATTCAACGAATTTCTAGAC+CGG | + | chr3_4:14266606-14266625 | Msa0491520:CDS | 35.0% |
| ! | GTAGAATTTGCTTAACGAAC+CGG | - | chr3_4:14266633-14266652 | None:intergenic | 35.0% |
| GGTTCGTTAAGCAAATTCTA+CGG | + | chr3_4:14266632-14266651 | Msa0491520:CDS | 35.0% | |
| AAGCAAATTCTACGGTTCAA+TGG | + | chr3_4:14266640-14266659 | Msa0491520:CDS | 35.0% | |
| ATCATCTTTACGTGGAAGAA+TGG | + | chr3_4:14266673-14266692 | Msa0491520:CDS | 35.0% | |
| GATGATAATTCTTTCGTCGT+CGG | - | chr3_4:14266731-14266750 | None:intergenic | 35.0% | |
| TGTATTTGACGAGTTTGAGA+GGG | + | chr3_4:14266885-14266904 | Msa0491520:CDS | 35.0% | |
| !! | TTTTGAAAGGGTTTAGGGTT+TGG | + | chr3_4:14266948-14266967 | Msa0491520:CDS | 35.0% |
| ! | TTTGAAAGGGTTTAGGGTTT+GGG | + | chr3_4:14266949-14266968 | Msa0491520:CDS | 35.0% |
| TGCTTTCAGAAAAGAATTGC+AGG | + | chr3_4:14267000-14267019 | Msa0491520:CDS | 35.0% | |
| GAACAAGAAGAAAGAAGGTT+TGG | - | chr3_4:14267028-14267047 | None:intergenic | 35.0% | |
| !! | GCGATTTGATTTTAGTAGAC+AGG | + | chr3_4:14267491-14267510 | Msa0491520:intron | 35.0% |
| CAAATTATCAGCAGGAAAAC+CGG | + | chr3_4:14267869-14267888 | Msa0491520:intron | 35.0% | |
| AAAAATTCGCTGCAACTGTA+TGG | - | chr3_4:14267897-14267916 | None:intergenic | 35.0% | |
| GTGCATATAACAACAAGACA+TGG | - | chr3_4:14268023-14268042 | None:intergenic | 35.0% | |
| ! | TTCGTTAGAGGAAAGTACAT+TGG | + | chr3_4:14268125-14268144 | Msa0491520:CDS | 35.0% |
| !! | AGGTTTGTTGAAAAGATGCT+TGG | + | chr3_4:14268313-14268332 | Msa0491520:CDS | 35.0% |
| GTTCTGTGATTATGAAAACG+AGG | + | chr3_4:14268391-14268410 | Msa0491520:CDS | 35.0% | |
| !!! | CTGTCATGGTTTTAAATTCC+GGG | - | chr3_4:14268533-14268552 | None:intergenic | 35.0% |
| TCAGAGAATAGGAGGAAAAA+GGG | - | chr3_4:14268732-14268751 | None:intergenic | 35.0% | |
| ATCAGAGAATAGGAGGAAAA+AGG | - | chr3_4:14268733-14268752 | None:intergenic | 35.0% | |
| GAGTGAAATGAAATGTGTGG+AGG | - | chr3_4:14266278-14266297 | None:intergenic | 40.0% | |
| !! | CGAATTTTTCGAAGATGTCG+AGG | + | chr3_4:14266522-14266541 | Msa0491520:exon | 40.0% |
| CGGTCTAGAAATTCGTTGAA+TGG | - | chr3_4:14266608-14266627 | None:intergenic | 40.0% | |
| !!! | AGGTTTTAAATTCGACGACG+AGG | - | chr3_4:14266753-14266772 | None:intergenic | 40.0% |
| ! | TGGTTCGGAAGAAGATGAAA+AGG | + | chr3_4:14266820-14266839 | Msa0491520:CDS | 40.0% |
| GGTTCGGAAGAAGATGAAAA+GGG | + | chr3_4:14266821-14266840 | Msa0491520:CDS | 40.0% | |
| !! | AAAGGGTATGTTGTTTCGGT+TGG | + | chr3_4:14266838-14266857 | Msa0491520:CDS | 40.0% |
| GTGTATTTGACGAGTTTGAG+AGG | + | chr3_4:14266884-14266903 | Msa0491520:CDS | 40.0% | |
| AGGGATAAGAAGAACGTTTG+AGG | + | chr3_4:14266904-14266923 | Msa0491520:CDS | 40.0% | |
| TTACGATAGATATGTCGGAG+TGG | + | chr3_4:14267190-14267209 | Msa0491520:intron | 40.0% | |
| TTTCCTCTAACGAACACTTG+AGG | - | chr3_4:14268119-14268138 | None:intergenic | 40.0% | |
| ! | GTTAGAGGAAAGTACATTGG+TGG | + | chr3_4:14268128-14268147 | Msa0491520:CDS | 40.0% |
| ATACCTTGTGAGAATTGCAG+TGG | + | chr3_4:14268263-14268282 | Msa0491520:CDS | 40.0% | |
| TACCTTGTGAGAATTGCAGT+GGG | + | chr3_4:14268264-14268283 | Msa0491520:CDS | 40.0% | |
| ! | GCAATGAGAATGGACTTGTA+AGG | + | chr3_4:14268339-14268358 | Msa0491520:CDS | 40.0% |
| ACAGAACATCATTCCAGAAC+AGG | - | chr3_4:14268378-14268397 | None:intergenic | 40.0% | |
| ACACAACATCAGAGAATAGG+AGG | - | chr3_4:14268740-14268759 | None:intergenic | 40.0% | |
| ACGTGTGCATCGTGTTTGAT+CGG | - | chr3_4:14266562-14266581 | None:intergenic | 45.0% | |
| ! | AACGAATTTCTAGACCGGTC+CGG | + | chr3_4:14266611-14266630 | Msa0491520:CDS | 45.0% |
| ATTTGCTTAACGAACCGGAC+CGG | - | chr3_4:14266628-14266647 | None:intergenic | 45.0% | |
| GATAATTCTTTCGTCGTCGG+TGG | - | chr3_4:14266728-14266747 | None:intergenic | 45.0% | |
| ATTGTTGCTGCAGTCTGTGA+TGG | + | chr3_4:14268073-14268092 | Msa0491520:intron | 45.0% | |
| TTGTTGCTGCAGTCTGTGAT+GGG | + | chr3_4:14268074-14268093 | Msa0491520:intron | 45.0% | |
| ACAACTCTCGCAAACAAAGC+CGG | - | chr3_4:14268228-14268247 | None:intergenic | 45.0% | |
| TGCTTGGAGTGCAATGAGAA+TGG | + | chr3_4:14268329-14268348 | Msa0491520:CDS | 45.0% | |
| TCTTCTTCCGAACCAGAACG+CGG | - | chr3_4:14266815-14266834 | None:intergenic | 50.0% | |
| !! | GGGTATGTTGTTTCGGTTGG+CGG | + | chr3_4:14266841-14266860 | Msa0491520:CDS | 50.0% |
| GGATGCTGATGATCGGATTG+TGG | + | chr3_4:14266862-14266881 | Msa0491520:CDS | 50.0% | |
| TCGCTGCAACTGTATGGATC+CGG | - | chr3_4:14267891-14267910 | None:intergenic | 50.0% | |
| CTGCCTCAAGTGTTCGTTAG+AGG | + | chr3_4:14268113-14268132 | Msa0491520:CDS | 50.0% | |
| ! | GGTTTTCCCAAGATGAAGCC+CGG | + | chr3_4:14268206-14268225 | Msa0491520:CDS | 50.0% |
| ACAAAGCCGGGCTTCATCTT+GGG | - | chr3_4:14268215-14268234 | None:intergenic | 50.0% | |
| AACAAAGCCGGGCTTCATCT+TGG | - | chr3_4:14268216-14268235 | None:intergenic | 50.0% | |
| CAACTCTCGCAAACAAAGCC+GGG | - | chr3_4:14268227-14268246 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGAGTTG+TGG | + | chr3_4:14268227-14268246 | Msa0491520:CDS | 50.0% |
| CTCCCACTGCAATTCTCACA+AGG | - | chr3_4:14268269-14268288 | None:intergenic | 50.0% | |
| GTGAGAATTGCAGTGGGAGT+AGG | + | chr3_4:14268270-14268289 | Msa0491520:CDS | 50.0% | |
| ATTCCAGAACAGGCGCAACA+AGG | - | chr3_4:14268368-14268387 | None:intergenic | 50.0% | |
| AAGCGATTATGGTTGCAGCC+CGG | + | chr3_4:14268512-14268531 | Msa0491520:three_prime_UTR | 50.0% | |
| GCGCAAAAACAGCACTGTCA+TGG | - | chr3_4:14268547-14268566 | None:intergenic | 50.0% | |
| ACCTTCTTCTGAACCACGCG+CGG | + | chr3_4:14266769-14266788 | Msa0491520:CDS | 55.0% | |
| TTAGGTCAGAAGCCGCGTTC+TGG | + | chr3_4:14266800-14266819 | Msa0491520:CDS | 55.0% | |
| ! | TCAGAAGCCGCGTTCTGGTT+CGG | + | chr3_4:14266805-14266824 | Msa0491520:CDS | 55.0% |
| ! | GGTTGGCGGATGCTGATGAT+CGG | + | chr3_4:14266855-14266874 | Msa0491520:CDS | 55.0% |
| TGTCCTTGTTGCGCCTGTTC+TGG | + | chr3_4:14268362-14268381 | Msa0491520:CDS | 55.0% | |
| !! | GCTGCAGTCTGTGATGGGTG+AGG | + | chr3_4:14268079-14268098 | Msa0491520:intron | 60.0% |
| GCGAGAGTTGTGGCGATGCT+AGG | + | chr3_4:14268237-14268256 | Msa0491520:CDS | 60.0% | |
| GCCGCGCGTGGTTCAGAAGA+AGG | - | chr3_4:14266773-14266792 | None:intergenic | 65.0% | |
| CCTAACTTCGAAGCCGCGCG+TGG | - | chr3_4:14266785-14266804 | None:intergenic | 65.0% | |
| CCACGCGCGGCTTCGAAGTT+AGG | + | chr3_4:14266782-14266801 | Msa0491520:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 14266214 | 14268792 | 14266214 | ID=Msa0491520;Name=Msa0491520 |
| chr3_4 | mRNA | 14266214 | 14268792 | 14266214 | ID=Msa0491520-mRNA-1;Parent=Msa0491520;Name=Msa0491520-mRNA-1;_AED=0.02;_eAED=0.02;_QI=322|1|1|1|1|1|2|347|281 |
| chr3_4 | exon | 14266214 | 14267021 | 14266214 | ID=Msa0491520-mRNA-1:exon:4191;Parent=Msa0491520-mRNA-1 |
| chr3_4 | exon | 14268086 | 14268792 | 14268086 | ID=Msa0491520-mRNA-1:exon:4192;Parent=Msa0491520-mRNA-1 |
| chr3_4 | five_prime_UTR | 14266214 | 14266535 | 14266214 | ID=Msa0491520-mRNA-1:five_prime_utr;Parent=Msa0491520-mRNA-1 |
| chr3_4 | CDS | 14266536 | 14267021 | 14266536 | ID=Msa0491520-mRNA-1:cds;Parent=Msa0491520-mRNA-1 |
| chr3_4 | CDS | 14268086 | 14268445 | 14268086 | ID=Msa0491520-mRNA-1:cds;Parent=Msa0491520-mRNA-1 |
| chr3_4 | three_prime_UTR | 14268446 | 14268792 | 14268446 | ID=Msa0491520-mRNA-1:three_prime_utr;Parent=Msa0491520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
