Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0141560 | XP_039684174.1 | 97.462 | 394 | 9 | 1 | 1 | 394 | 1 | 393 | 0.0 | 785 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0141560 | sp|Q9FL41|WTR38_ARATH | 62.217 | 397 | 135 | 6 | 1 | 392 | 3 | 389 | 7.27e-172 | 488 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0141560 | A0A396H340 | 97.462 | 394 | 9 | 1 | 1 | 394 | 1 | 393 | 0.0 | 785 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0141560 | Msa0141570 | 0.806282 | 8.871902e-50 | -8.615850e-47 |
Msa0141560 | Msa1033150 | 0.842759 | 2.125766e-58 | -8.615850e-47 |
Msa0141560 | Msa1033210 | 0.808939 | 2.420517e-50 | -8.615850e-47 |
Msa0141560 | Msa1161150 | 0.866088 | 3.681997e-65 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0141560 | MtrunA17_Chr7g0255561 | 97.462 | 394 | 9 | 1 | 1 | 394 | 1 | 393 | 0.0 | 785 |
Msa0141560 | MtrunA17_Chr7g0255581 | 97.462 | 394 | 9 | 1 | 1 | 394 | 1 | 393 | 0.0 | 785 |
Msa0141560 | MtrunA17_Chr8g0354121 | 63.710 | 372 | 125 | 5 | 11 | 373 | 9 | 379 | 7.44e-171 | 483 |
Msa0141560 | MtrunA17_Chr3g0081511 | 63.333 | 360 | 124 | 4 | 2 | 357 | 4 | 359 | 2.94e-163 | 463 |
Msa0141560 | MtrunA17_Chr3g0081421 | 57.552 | 384 | 157 | 3 | 1 | 378 | 3 | 386 | 7.29e-161 | 457 |
Msa0141560 | MtrunA17_Chr1g0160171 | 49.077 | 379 | 186 | 3 | 4 | 379 | 3 | 377 | 8.96e-128 | 373 |
Msa0141560 | MtrunA17_Chr7g0263101 | 52.853 | 333 | 152 | 2 | 6 | 337 | 4 | 332 | 3.77e-125 | 366 |
Msa0141560 | MtrunA17_Chr3g0114691 | 46.891 | 386 | 196 | 5 | 2 | 382 | 7 | 388 | 7.82e-124 | 363 |
Msa0141560 | MtrunA17_Chr1g0182291 | 49.577 | 355 | 168 | 4 | 7 | 356 | 7 | 355 | 1.08e-121 | 357 |
Msa0141560 | MtrunA17_Chr3g0114731 | 47.904 | 334 | 168 | 1 | 11 | 344 | 14 | 341 | 1.25e-112 | 335 |
Msa0141560 | MtrunA17_Chr1g0160181 | 47.041 | 338 | 176 | 2 | 8 | 344 | 11 | 346 | 2.71e-110 | 328 |
Msa0141560 | MtrunA17_Chr3g0114711 | 41.598 | 363 | 170 | 4 | 12 | 337 | 11 | 368 | 1.21e-104 | 314 |
Msa0141560 | MtrunA17_Chr3g0114701 | 45.783 | 332 | 177 | 2 | 9 | 339 | 3 | 332 | 7.08e-100 | 301 |
Msa0141560 | MtrunA17_Chr1g0171301 | 42.330 | 352 | 196 | 4 | 6 | 356 | 7 | 352 | 1.43e-93 | 285 |
Msa0141560 | MtrunA17_Chr1g0186601 | 42.730 | 337 | 183 | 5 | 11 | 345 | 12 | 340 | 1.69e-93 | 284 |
Msa0141560 | MtrunA17_Chr1g0186611 | 42.560 | 336 | 185 | 3 | 11 | 345 | 12 | 340 | 2.50e-90 | 276 |
Msa0141560 | MtrunA17_Chr1g0186571 | 42.388 | 335 | 185 | 3 | 12 | 345 | 10 | 337 | 3.55e-89 | 273 |
Msa0141560 | MtrunA17_Chr1g0186641 | 42.683 | 328 | 181 | 3 | 12 | 338 | 10 | 331 | 5.65e-89 | 272 |
Msa0141560 | MtrunA17_Chr1g0186561 | 43.155 | 336 | 184 | 3 | 11 | 345 | 12 | 341 | 7.97e-89 | 272 |
Msa0141560 | MtrunA17_Chr7g0271561 | 38.965 | 367 | 217 | 4 | 16 | 377 | 8 | 372 | 1.31e-86 | 268 |
Msa0141560 | MtrunA17_Chr6g0463971 | 36.620 | 355 | 218 | 4 | 12 | 365 | 13 | 361 | 4.49e-85 | 263 |
Msa0141560 | MtrunA17_Chr3g0142131 | 39.655 | 348 | 201 | 1 | 5 | 343 | 10 | 357 | 6.80e-82 | 256 |
Msa0141560 | MtrunA17_Chr2g0278561 | 38.551 | 345 | 205 | 3 | 1 | 343 | 3 | 342 | 2.79e-80 | 251 |
Msa0141560 | MtrunA17_Chr4g0059311 | 37.462 | 331 | 202 | 2 | 10 | 339 | 6 | 332 | 1.17e-79 | 249 |
Msa0141560 | MtrunA17_Chr2g0278541 | 38.507 | 335 | 198 | 3 | 15 | 343 | 12 | 344 | 1.61e-79 | 249 |
Msa0141560 | MtrunA17_Chr2g0290611 | 38.824 | 340 | 200 | 3 | 12 | 348 | 9 | 343 | 2.23e-79 | 248 |
Msa0141560 | MtrunA17_Chr1g0184221 | 34.957 | 349 | 205 | 2 | 11 | 345 | 12 | 352 | 2.61e-79 | 248 |
Msa0141560 | MtrunA17_Chr1g0155761 | 38.617 | 347 | 199 | 2 | 12 | 344 | 18 | 364 | 1.00e-78 | 248 |
Msa0141560 | MtrunA17_Chr2g0278551 | 38.053 | 339 | 204 | 2 | 15 | 351 | 12 | 346 | 3.02e-75 | 239 |
Msa0141560 | MtrunA17_Chr4g0050881 | 38.253 | 332 | 200 | 4 | 15 | 344 | 9 | 337 | 3.27e-75 | 237 |
Msa0141560 | MtrunA17_Chr3g0129571 | 34.000 | 350 | 216 | 2 | 16 | 350 | 8 | 357 | 1.91e-74 | 236 |
Msa0141560 | MtrunA17_Chr6g0483401 | 37.202 | 336 | 211 | 0 | 24 | 359 | 19 | 354 | 5.45e-74 | 234 |
Msa0141560 | MtrunA17_Chr3g0129601 | 33.431 | 341 | 214 | 2 | 15 | 349 | 29 | 362 | 2.56e-72 | 230 |
Msa0141560 | MtrunA17_Chr2g0284261 | 36.474 | 329 | 203 | 3 | 12 | 340 | 5 | 327 | 5.00e-72 | 229 |
Msa0141560 | MtrunA17_Chr8g0334761 | 35.422 | 367 | 224 | 3 | 16 | 377 | 11 | 369 | 2.63e-71 | 228 |
Msa0141560 | MtrunA17_Chr4g0051021 | 36.232 | 345 | 212 | 4 | 12 | 352 | 11 | 351 | 4.00e-71 | 228 |
Msa0141560 | MtrunA17_Chr4g0050891 | 37.500 | 328 | 194 | 3 | 11 | 332 | 9 | 331 | 1.12e-70 | 226 |
Msa0141560 | MtrunA17_Chr1g0160111 | 33.973 | 365 | 215 | 4 | 24 | 377 | 16 | 365 | 7.43e-70 | 224 |
Msa0141560 | MtrunA17_Chr2g0332001 | 35.905 | 337 | 210 | 3 | 10 | 345 | 33 | 364 | 3.03e-69 | 223 |
Msa0141560 | MtrunA17_Chr4g0050941 | 37.831 | 378 | 215 | 7 | 11 | 374 | 8 | 379 | 3.37e-69 | 223 |
Msa0141560 | MtrunA17_Chr1g0177221 | 42.857 | 252 | 138 | 2 | 15 | 265 | 18 | 264 | 1.19e-68 | 218 |
Msa0141560 | MtrunA17_Chr1g0164831 | 35.000 | 340 | 210 | 4 | 15 | 351 | 3 | 334 | 4.19e-68 | 218 |
Msa0141560 | MtrunA17_Chr3g0129591 | 34.393 | 346 | 219 | 3 | 16 | 356 | 6 | 348 | 1.09e-66 | 216 |
Msa0141560 | MtrunA17_Chr8g0334751 | 36.812 | 345 | 205 | 4 | 16 | 355 | 12 | 348 | 1.51e-63 | 207 |
Msa0141560 | MtrunA17_Chr8g0383731 | 33.535 | 331 | 214 | 2 | 12 | 338 | 2 | 330 | 6.63e-63 | 205 |
Msa0141560 | MtrunA17_Chr5g0413941 | 35.671 | 328 | 205 | 3 | 19 | 345 | 11 | 333 | 5.35e-62 | 203 |
Msa0141560 | MtrunA17_Chr3g0129581 | 35.549 | 346 | 215 | 3 | 16 | 356 | 6 | 348 | 7.98e-62 | 203 |
Msa0141560 | MtrunA17_Chr8g0334771 | 35.119 | 336 | 203 | 3 | 16 | 345 | 11 | 337 | 9.17e-62 | 203 |
Msa0141560 | MtrunA17_Chr3g0126101 | 34.012 | 344 | 214 | 5 | 16 | 356 | 7 | 340 | 1.77e-61 | 201 |
Msa0141560 | MtrunA17_Chr2g0310441 | 33.837 | 331 | 212 | 3 | 16 | 344 | 11 | 336 | 3.66e-60 | 199 |
Msa0141560 | MtrunA17_Chr5g0413961 | 31.402 | 328 | 217 | 2 | 12 | 339 | 11 | 330 | 5.42e-60 | 198 |
Msa0141560 | MtrunA17_Chr1g0150151 | 31.503 | 346 | 228 | 4 | 1 | 344 | 1 | 339 | 1.32e-59 | 197 |
Msa0141560 | MtrunA17_Chr5g0413921 | 35.366 | 328 | 202 | 5 | 20 | 344 | 12 | 332 | 2.98e-59 | 196 |
Msa0141560 | MtrunA17_Chr5g0413951 | 35.294 | 323 | 197 | 5 | 20 | 338 | 12 | 326 | 4.95e-58 | 192 |
Msa0141560 | MtrunA17_Chr7g0227921 | 34.320 | 338 | 207 | 6 | 11 | 344 | 7 | 333 | 5.11e-57 | 191 |
Msa0141560 | MtrunA17_Chr4g0073241 | 30.792 | 341 | 222 | 4 | 16 | 351 | 9 | 340 | 6.59e-56 | 187 |
Msa0141560 | MtrunA17_Chr5g0407971 | 35.015 | 337 | 205 | 4 | 15 | 339 | 11 | 345 | 6.70e-56 | 188 |
Msa0141560 | MtrunA17_Chr5g0413931 | 34.146 | 328 | 206 | 5 | 20 | 344 | 11 | 331 | 1.50e-54 | 184 |
Msa0141560 | MtrunA17_Chr4g0050931 | 32.754 | 345 | 184 | 4 | 11 | 349 | 8 | 310 | 3.18e-54 | 182 |
Msa0141560 | MtrunA17_Chr6g0451171 | 31.694 | 366 | 237 | 7 | 9 | 372 | 6 | 360 | 4.06e-53 | 180 |
Msa0141560 | MtrunA17_Chr5g0408001 | 34.808 | 339 | 207 | 4 | 15 | 341 | 10 | 346 | 4.64e-53 | 181 |
Msa0141560 | MtrunA17_Chr4g0051001 | 33.443 | 305 | 200 | 2 | 12 | 315 | 28 | 330 | 4.39e-52 | 177 |
Msa0141560 | MtrunA17_Chr5g0407991 | 34.211 | 342 | 213 | 2 | 15 | 345 | 9 | 349 | 5.27e-52 | 178 |
Msa0141560 | MtrunA17_Chr6g0451251 | 33.989 | 356 | 223 | 5 | 9 | 362 | 6 | 351 | 2.06e-51 | 176 |
Msa0141560 | MtrunA17_Chr6g0451201 | 32.402 | 358 | 230 | 6 | 5 | 362 | 2 | 347 | 3.16e-51 | 175 |
Msa0141560 | MtrunA17_Chr5g0428881 | 28.783 | 337 | 239 | 1 | 10 | 346 | 13 | 348 | 9.12e-51 | 174 |
Msa0141560 | MtrunA17_Chr5g0408031 | 33.626 | 342 | 211 | 4 | 12 | 339 | 7 | 346 | 1.36e-50 | 174 |
Msa0141560 | MtrunA17_Chr5g0408041 | 34.694 | 343 | 208 | 4 | 15 | 343 | 11 | 351 | 8.14e-50 | 172 |
Msa0141560 | MtrunA17_Chr6g0451211 | 32.647 | 340 | 215 | 6 | 9 | 344 | 6 | 335 | 2.57e-48 | 167 |
Msa0141560 | MtrunA17_Chr3g0126091 | 30.088 | 339 | 220 | 5 | 16 | 345 | 12 | 342 | 1.43e-47 | 166 |
Msa0141560 | MtrunA17_Chr5g0441761 | 28.228 | 333 | 229 | 2 | 19 | 351 | 18 | 340 | 1.88e-47 | 165 |
Msa0141560 | MtrunA17_Chr8g0369841 | 30.357 | 336 | 222 | 2 | 15 | 339 | 9 | 343 | 4.23e-46 | 162 |
Msa0141560 | MtrunA17_Chr1g0211801 | 32.432 | 259 | 170 | 3 | 7 | 265 | 3 | 256 | 1.84e-42 | 149 |
Msa0141560 | MtrunA17_Chr6g0451261 | 29.841 | 315 | 212 | 5 | 5 | 318 | 4 | 310 | 9.11e-41 | 154 |
Msa0141560 | MtrunA17_Chr5g0429001 | 30.000 | 280 | 191 | 2 | 68 | 346 | 8 | 283 | 1.71e-39 | 143 |
Msa0141560 | MtrunA17_Chr5g0404811 | 34.842 | 221 | 142 | 1 | 123 | 343 | 1 | 219 | 9.78e-39 | 139 |
Msa0141560 | MtrunA17_Chr3g0084091 | 30.864 | 243 | 165 | 1 | 95 | 337 | 10 | 249 | 1.98e-38 | 140 |
Msa0141560 | MtrunA17_Chr2g0278021 | 35.484 | 217 | 133 | 3 | 129 | 340 | 1 | 215 | 2.92e-33 | 125 |
Msa0141560 | MtrunA17_Chr6g0451191 | 31.984 | 247 | 156 | 5 | 129 | 373 | 1 | 237 | 7.13e-33 | 123 |
Msa0141560 | MtrunA17_Chr4g0056081 | 28.783 | 337 | 207 | 10 | 19 | 338 | 18 | 338 | 1.21e-32 | 125 |
Msa0141560 | MtrunA17_Chr1g0182261 | 45.714 | 140 | 73 | 3 | 208 | 344 | 78 | 217 | 3.39e-32 | 121 |
Msa0141560 | MtrunA17_Chr1g0182261 | 40.000 | 75 | 45 | 0 | 11 | 85 | 10 | 84 | 2.68e-13 | 68.9 |
Msa0141560 | MtrunA17_Chr8g0334711 | 35.644 | 202 | 116 | 4 | 16 | 212 | 11 | 203 | 2.12e-31 | 118 |
Msa0141560 | MtrunA17_Chr5g0399281 | 27.640 | 322 | 227 | 5 | 19 | 338 | 12 | 329 | 3.38e-30 | 119 |
Msa0141560 | MtrunA17_Chr1g0172881 | 41.096 | 146 | 71 | 4 | 123 | 265 | 16 | 149 | 8.57e-28 | 107 |
Msa0141560 | MtrunA17_Chr5g0404801 | 44.444 | 117 | 65 | 0 | 12 | 128 | 4 | 120 | 2.05e-25 | 100 |
Msa0141560 | MtrunA17_Chr8g0372571 | 93.478 | 46 | 3 | 0 | 244 | 289 | 1 | 46 | 1.62e-24 | 95.9 |
Msa0141560 | MtrunA17_Chr2g0278031 | 42.342 | 111 | 64 | 0 | 15 | 125 | 14 | 124 | 2.63e-24 | 97.1 |
Msa0141560 | MtrunA17_Chr4g0021721 | 91.304 | 46 | 4 | 0 | 244 | 289 | 1 | 46 | 7.32e-24 | 93.6 |
Msa0141560 | MtrunA17_Chr8g0334721 | 40.164 | 122 | 73 | 0 | 229 | 350 | 1 | 122 | 9.22e-24 | 96.7 |
Msa0141560 | MtrunA17_Chr1g0177231 | 51.899 | 79 | 38 | 0 | 266 | 344 | 29 | 107 | 4.31e-22 | 90.9 |
Msa0141560 | MtrunA17_Chr1g0172891 | 51.250 | 80 | 38 | 1 | 272 | 351 | 13 | 91 | 4.38e-20 | 85.1 |
Msa0141560 | MtrunA17_Chr8g0334731 | 29.717 | 212 | 122 | 7 | 16 | 224 | 12 | 199 | 6.95e-18 | 81.3 |
Msa0141560 | MtrunA17_Chr4g0050911 | 40.449 | 89 | 52 | 1 | 95 | 182 | 11 | 99 | 5.00e-16 | 75.1 |
Msa0141560 | MtrunA17_Chr4g0050921 | 32.353 | 102 | 69 | 0 | 217 | 318 | 3 | 104 | 6.16e-16 | 73.9 |
Msa0141560 | MtrunA17_Chr1g0211811 | 35.227 | 88 | 55 | 1 | 267 | 352 | 1 | 88 | 8.92e-16 | 72.4 |
Msa0141560 | MtrunA17_Chr6g0451241 | 52.459 | 61 | 27 | 1 | 284 | 344 | 26 | 84 | 1.43e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0141560 | AT5G07050.1 | 62.217 | 397 | 135 | 6 | 1 | 392 | 3 | 389 | 7.39e-173 | 488 |
Msa0141560 | AT2G40900.1 | 53.619 | 373 | 160 | 4 | 12 | 382 | 7 | 368 | 5.42e-152 | 435 |
Msa0141560 | AT3G56620.1 | 53.743 | 374 | 163 | 3 | 12 | 383 | 7 | 372 | 2.48e-143 | 412 |
Msa0141560 | AT1G21890.1 | 50.440 | 341 | 164 | 1 | 15 | 350 | 10 | 350 | 1.54e-127 | 373 |
Msa0141560 | AT4G08300.1 | 49.462 | 372 | 173 | 4 | 12 | 373 | 7 | 373 | 2.62e-124 | 364 |
Msa0141560 | AT2G37460.1 | 51.176 | 340 | 154 | 3 | 12 | 345 | 11 | 344 | 3.92e-123 | 361 |
Msa0141560 | AT1G44800.1 | 47.977 | 346 | 175 | 3 | 12 | 356 | 7 | 348 | 1.13e-120 | 355 |
Msa0141560 | AT2G39510.1 | 47.632 | 359 | 182 | 3 | 15 | 372 | 7 | 360 | 5.20e-120 | 353 |
Msa0141560 | AT1G21890.2 | 51.961 | 306 | 142 | 1 | 15 | 315 | 10 | 315 | 5.03e-114 | 337 |
Msa0141560 | AT4G08290.1 | 46.291 | 337 | 176 | 2 | 1 | 337 | 1 | 332 | 4.00e-112 | 333 |
Msa0141560 | AT5G13670.1 | 45.015 | 331 | 175 | 4 | 11 | 338 | 3 | 329 | 1.51e-102 | 308 |
Msa0141560 | AT2G37450.2 | 43.235 | 340 | 165 | 3 | 12 | 350 | 5 | 317 | 7.47e-90 | 275 |
Msa0141560 | AT1G09380.1 | 40.125 | 319 | 191 | 0 | 16 | 334 | 8 | 326 | 1.56e-85 | 265 |
Msa0141560 | AT1G75500.1 | 37.119 | 361 | 218 | 4 | 12 | 365 | 16 | 374 | 1.04e-78 | 248 |
Msa0141560 | AT1G75500.2 | 37.119 | 361 | 218 | 4 | 12 | 365 | 16 | 374 | 1.04e-78 | 248 |
Msa0141560 | AT4G08290.2 | 42.424 | 264 | 147 | 2 | 1 | 264 | 1 | 259 | 2.59e-77 | 241 |
Msa0141560 | AT3G18200.2 | 39.286 | 336 | 194 | 4 | 12 | 345 | 31 | 358 | 4.95e-77 | 243 |
Msa0141560 | AT3G53210.1 | 37.500 | 336 | 201 | 2 | 12 | 344 | 6 | 335 | 2.15e-73 | 233 |
Msa0141560 | AT5G64700.1 | 35.119 | 336 | 213 | 3 | 15 | 346 | 7 | 341 | 1.23e-72 | 231 |
Msa0141560 | AT3G30340.1 | 35.692 | 325 | 206 | 1 | 15 | 339 | 10 | 331 | 5.77e-70 | 224 |
Msa0141560 | AT1G43650.1 | 36.023 | 347 | 212 | 4 | 15 | 360 | 6 | 343 | 2.01e-68 | 220 |
Msa0141560 | AT4G30420.2 | 35.294 | 357 | 209 | 6 | 12 | 356 | 5 | 351 | 3.38e-67 | 218 |
Msa0141560 | AT1G25270.1 | 36.503 | 326 | 205 | 1 | 15 | 340 | 2 | 325 | 3.67e-66 | 214 |
Msa0141560 | AT4G30420.1 | 35.652 | 345 | 212 | 4 | 18 | 356 | 1 | 341 | 1.93e-65 | 213 |
Msa0141560 | AT2G37450.3 | 45.378 | 238 | 123 | 2 | 101 | 337 | 1 | 232 | 6.00e-65 | 208 |
Msa0141560 | AT1G01070.1 | 33.994 | 353 | 225 | 4 | 1 | 351 | 1 | 347 | 4.93e-61 | 201 |
Msa0141560 | AT1G68170.2 | 33.934 | 333 | 215 | 2 | 11 | 341 | 8 | 337 | 9.89e-57 | 190 |
Msa0141560 | AT1G68170.1 | 33.521 | 355 | 226 | 3 | 15 | 362 | 2 | 353 | 1.96e-56 | 189 |
Msa0141560 | AT4G01440.1 | 31.343 | 335 | 218 | 2 | 16 | 346 | 10 | 336 | 6.86e-56 | 188 |
Msa0141560 | AT1G11450.3 | 32.551 | 341 | 223 | 4 | 12 | 351 | 12 | 346 | 3.11e-55 | 186 |
Msa0141560 | AT5G40210.1 | 34.043 | 329 | 181 | 6 | 19 | 339 | 16 | 316 | 3.28e-55 | 185 |
Msa0141560 | AT5G40240.1 | 31.751 | 337 | 226 | 4 | 4 | 338 | 7 | 341 | 3.83e-55 | 186 |
Msa0141560 | AT5G40240.3 | 31.751 | 337 | 226 | 4 | 4 | 338 | 7 | 341 | 3.83e-55 | 186 |
Msa0141560 | AT5G40240.2 | 32.059 | 340 | 226 | 5 | 2 | 338 | 18 | 355 | 5.73e-55 | 186 |
Msa0141560 | AT4G28040.1 | 32.036 | 334 | 204 | 7 | 12 | 340 | 4 | 319 | 5.87e-55 | 185 |
Msa0141560 | AT4G28040.5 | 32.036 | 334 | 204 | 7 | 12 | 340 | 4 | 319 | 5.87e-55 | 185 |
Msa0141560 | AT4G28040.3 | 32.036 | 334 | 204 | 7 | 12 | 340 | 4 | 319 | 5.87e-55 | 185 |
Msa0141560 | AT4G28040.4 | 32.036 | 334 | 204 | 7 | 12 | 340 | 4 | 319 | 5.87e-55 | 185 |
Msa0141560 | AT4G28040.2 | 32.036 | 334 | 204 | 7 | 12 | 340 | 4 | 319 | 5.87e-55 | 185 |
Msa0141560 | AT1G11460.1 | 33.131 | 329 | 211 | 3 | 12 | 337 | 12 | 334 | 2.86e-54 | 183 |
Msa0141560 | AT5G40230.1 | 31.778 | 343 | 222 | 6 | 3 | 339 | 7 | 343 | 4.96e-53 | 181 |
Msa0141560 | AT2G37450.1 | 42.411 | 224 | 122 | 2 | 128 | 350 | 61 | 278 | 1.53e-52 | 177 |
Msa0141560 | AT2G37450.1 | 54.386 | 57 | 26 | 0 | 12 | 68 | 5 | 61 | 3.27e-13 | 70.1 |
Msa0141560 | AT4G01430.1 | 30.588 | 340 | 230 | 4 | 12 | 348 | 5 | 341 | 2.18e-51 | 176 |
Msa0141560 | AT3G53210.2 | 36.328 | 256 | 154 | 2 | 92 | 344 | 29 | 278 | 9.22e-51 | 173 |
Msa0141560 | AT5G45370.1 | 33.645 | 321 | 199 | 2 | 19 | 339 | 23 | 329 | 5.08e-50 | 172 |
Msa0141560 | AT3G28050.1 | 31.579 | 342 | 216 | 9 | 10 | 345 | 5 | 334 | 5.42e-50 | 172 |
Msa0141560 | AT3G45870.1 | 34.154 | 325 | 206 | 3 | 15 | 332 | 11 | 334 | 2.09e-49 | 171 |
Msa0141560 | AT4G01440.3 | 30.921 | 304 | 198 | 2 | 16 | 315 | 10 | 305 | 3.80e-49 | 169 |
Msa0141560 | AT1G11450.5 | 33.663 | 303 | 194 | 4 | 50 | 351 | 6 | 302 | 4.00e-49 | 169 |
Msa0141560 | AT5G45370.2 | 32.530 | 332 | 212 | 2 | 19 | 339 | 23 | 353 | 5.22e-49 | 170 |
Msa0141560 | AT5G45370.4 | 32.530 | 332 | 212 | 2 | 19 | 339 | 23 | 353 | 5.22e-49 | 170 |
Msa0141560 | AT1G70260.1 | 29.290 | 338 | 227 | 3 | 16 | 345 | 12 | 345 | 1.37e-48 | 169 |
Msa0141560 | AT1G01070.2 | 34.589 | 292 | 183 | 4 | 62 | 351 | 15 | 300 | 1.39e-48 | 167 |
Msa0141560 | AT3G53210.3 | 35.918 | 245 | 148 | 2 | 12 | 253 | 6 | 244 | 6.84e-48 | 164 |
Msa0141560 | AT1G11450.2 | 33.333 | 300 | 193 | 4 | 53 | 351 | 2 | 295 | 1.38e-47 | 164 |
Msa0141560 | AT3G18200.1 | 38.559 | 236 | 135 | 4 | 112 | 345 | 1 | 228 | 2.14e-47 | 162 |
Msa0141560 | AT4G19185.1 | 32.934 | 334 | 212 | 2 | 17 | 339 | 22 | 354 | 7.59e-47 | 165 |
Msa0141560 | AT3G28130.2 | 32.047 | 337 | 211 | 7 | 19 | 345 | 16 | 344 | 9.84e-47 | 164 |
Msa0141560 | AT3G28100.1 | 31.378 | 341 | 219 | 7 | 7 | 340 | 4 | 336 | 1.23e-46 | 163 |
Msa0141560 | AT5G64700.2 | 33.071 | 254 | 165 | 3 | 15 | 264 | 7 | 259 | 5.10e-46 | 159 |
Msa0141560 | AT4G15540.1 | 31.085 | 341 | 218 | 4 | 1 | 339 | 1 | 326 | 5.27e-46 | 161 |
Msa0141560 | AT4G15540.2 | 31.085 | 341 | 218 | 4 | 1 | 339 | 1 | 326 | 5.27e-46 | 161 |
Msa0141560 | AT3G30340.2 | 33.865 | 251 | 163 | 1 | 15 | 265 | 10 | 257 | 7.90e-46 | 159 |
Msa0141560 | AT1G11450.4 | 31.148 | 305 | 204 | 3 | 12 | 315 | 12 | 311 | 9.80e-45 | 157 |
Msa0141560 | AT3G28070.2 | 35.102 | 245 | 153 | 4 | 98 | 340 | 7 | 247 | 1.45e-44 | 155 |
Msa0141560 | AT3G28070.1 | 35.102 | 245 | 153 | 4 | 98 | 340 | 99 | 339 | 1.64e-43 | 155 |
Msa0141560 | AT3G45870.8 | 33.442 | 308 | 197 | 3 | 15 | 315 | 11 | 317 | 4.02e-43 | 153 |
Msa0141560 | AT3G28130.5 | 34.783 | 253 | 157 | 4 | 98 | 345 | 9 | 258 | 4.04e-43 | 152 |
Msa0141560 | AT3G28130.1 | 34.783 | 253 | 157 | 4 | 98 | 345 | 9 | 258 | 4.04e-43 | 152 |
Msa0141560 | AT4G01430.2 | 30.945 | 307 | 206 | 4 | 12 | 315 | 5 | 308 | 2.86e-42 | 150 |
Msa0141560 | AT5G47470.1 | 31.014 | 345 | 222 | 7 | 4 | 343 | 18 | 351 | 3.22e-42 | 152 |
Msa0141560 | AT5G47470.3 | 31.014 | 345 | 222 | 7 | 4 | 343 | 46 | 379 | 4.26e-42 | 152 |
Msa0141560 | AT5G47470.2 | 31.014 | 345 | 222 | 7 | 4 | 343 | 46 | 379 | 4.52e-42 | 152 |
Msa0141560 | AT4G24980.1 | 29.450 | 309 | 148 | 5 | 30 | 338 | 1 | 239 | 4.80e-41 | 146 |
Msa0141560 | AT3G28080.5 | 36.475 | 244 | 147 | 6 | 100 | 340 | 9 | 247 | 9.55e-41 | 145 |
Msa0141560 | AT3G28080.7 | 36.475 | 244 | 147 | 6 | 100 | 340 | 9 | 247 | 9.55e-41 | 145 |
Msa0141560 | AT3G28080.8 | 36.475 | 244 | 147 | 6 | 100 | 340 | 9 | 247 | 9.55e-41 | 145 |
Msa0141560 | AT3G28080.6 | 36.475 | 244 | 147 | 6 | 100 | 340 | 9 | 247 | 9.55e-41 | 145 |
Msa0141560 | AT3G28080.1 | 32.622 | 328 | 207 | 9 | 19 | 340 | 17 | 336 | 1.45e-40 | 147 |
Msa0141560 | AT3G28080.2 | 36.475 | 244 | 147 | 6 | 100 | 340 | 90 | 328 | 8.49e-40 | 145 |
Msa0141560 | AT1G43650.2 | 33.466 | 251 | 158 | 3 | 15 | 264 | 6 | 248 | 1.04e-39 | 142 |
Msa0141560 | AT4G01440.4 | 31.890 | 254 | 161 | 2 | 16 | 265 | 10 | 255 | 1.36e-39 | 142 |
Msa0141560 | AT4G01450.2 | 32.500 | 320 | 199 | 3 | 28 | 342 | 21 | 328 | 1.50e-38 | 142 |
Msa0141560 | AT4G01450.1 | 31.058 | 293 | 185 | 3 | 28 | 315 | 21 | 301 | 1.14e-36 | 136 |
Msa0141560 | AT1G11450.1 | 32.046 | 259 | 169 | 4 | 94 | 351 | 2 | 254 | 7.16e-36 | 132 |
Msa0141560 | AT3G45870.9 | 34.553 | 246 | 154 | 2 | 15 | 253 | 11 | 256 | 7.50e-36 | 132 |
Msa0141560 | AT4G19185.2 | 31.783 | 258 | 164 | 2 | 93 | 339 | 20 | 276 | 9.72e-36 | 133 |
Msa0141560 | AT1G60050.1 | 28.080 | 349 | 223 | 6 | 16 | 348 | 13 | 349 | 4.65e-35 | 133 |
Msa0141560 | AT4G01440.5 | 30.435 | 230 | 156 | 1 | 117 | 346 | 3 | 228 | 2.74e-34 | 128 |
Msa0141560 | AT4G01440.2 | 30.435 | 230 | 156 | 1 | 117 | 346 | 3 | 228 | 2.74e-34 | 128 |
Msa0141560 | AT4G01450.4 | 33.624 | 229 | 135 | 3 | 28 | 251 | 21 | 237 | 3.21e-33 | 125 |
Msa0141560 | AT4G16620.1 | 31.250 | 304 | 196 | 7 | 46 | 343 | 41 | 337 | 4.65e-33 | 127 |
Msa0141560 | AT3G28070.3 | 33.182 | 220 | 141 | 4 | 98 | 315 | 99 | 314 | 1.25e-32 | 125 |
Msa0141560 | AT4G01450.3 | 34.434 | 212 | 122 | 3 | 28 | 234 | 21 | 220 | 4.42e-31 | 119 |
Msa0141560 | AT5G45370.6 | 31.076 | 251 | 161 | 2 | 100 | 339 | 2 | 251 | 1.75e-30 | 118 |
Msa0141560 | AT5G45370.5 | 31.076 | 251 | 161 | 2 | 100 | 339 | 2 | 251 | 1.75e-30 | 118 |
Msa0141560 | AT3G28070.5 | 32.243 | 214 | 139 | 4 | 129 | 340 | 1 | 210 | 9.90e-30 | 115 |
Msa0141560 | AT3G28130.3 | 32.432 | 222 | 142 | 4 | 129 | 345 | 1 | 219 | 1.67e-29 | 114 |
Msa0141560 | AT3G28080.3 | 28.528 | 326 | 169 | 8 | 19 | 340 | 17 | 282 | 1.55e-27 | 111 |
Msa0141560 | AT3G28080.4 | 30.992 | 242 | 109 | 5 | 100 | 340 | 9 | 193 | 2.00e-27 | 108 |
Msa0141560 | AT3G28080.9 | 33.953 | 215 | 134 | 6 | 129 | 340 | 1 | 210 | 5.37e-27 | 107 |
Msa0141560 | AT3G28100.3 | 30.645 | 248 | 159 | 5 | 19 | 260 | 17 | 257 | 1.25e-26 | 107 |
Msa0141560 | AT3G45870.5 | 33.019 | 212 | 134 | 3 | 128 | 332 | 49 | 259 | 7.36e-26 | 106 |
Msa0141560 | AT3G28130.4 | 29.435 | 248 | 162 | 5 | 19 | 260 | 16 | 256 | 5.46e-24 | 100 |
Msa0141560 | AT4G16620.4 | 30.769 | 247 | 160 | 5 | 101 | 343 | 1 | 240 | 5.69e-24 | 100 |
Msa0141560 | AT4G16620.2 | 30.769 | 247 | 160 | 5 | 101 | 343 | 1 | 240 | 5.69e-24 | 100 |
Msa0141560 | AT3G28100.2 | 32.663 | 199 | 122 | 4 | 19 | 212 | 17 | 208 | 3.57e-21 | 92.4 |
Msa0141560 | AT5G45370.3 | 28.395 | 243 | 160 | 3 | 110 | 339 | 52 | 293 | 5.37e-21 | 93.2 |
Msa0141560 | AT3G28130.6 | 31.658 | 199 | 124 | 4 | 19 | 212 | 16 | 207 | 3.62e-20 | 88.6 |
Msa0141560 | AT3G45870.6 | 31.795 | 195 | 125 | 3 | 128 | 315 | 49 | 242 | 5.61e-20 | 89.0 |
Msa0141560 | AT3G45870.7 | 31.795 | 195 | 125 | 3 | 128 | 315 | 49 | 242 | 5.61e-20 | 89.0 |
Msa0141560 | AT4G16620.3 | 29.703 | 202 | 134 | 4 | 46 | 245 | 41 | 236 | 6.20e-20 | 89.4 |
Msa0141560 | AT4G01430.3 | 27.536 | 207 | 145 | 3 | 144 | 348 | 1 | 204 | 6.94e-20 | 88.2 |
Msa0141560 | AT3G45870.2 | 33.333 | 147 | 97 | 1 | 186 | 332 | 38 | 183 | 2.88e-16 | 78.2 |
Msa0141560 | AT3G45870.4 | 32.824 | 131 | 81 | 2 | 130 | 253 | 4 | 134 | 7.36e-13 | 66.6 |
Msa0141560 | AT3G45870.3 | 30.769 | 156 | 98 | 3 | 105 | 253 | 29 | 181 | 1.17e-12 | 67.0 |
Msa0141560 | AT3G28060.1 | 27.922 | 154 | 88 | 5 | 169 | 315 | 17 | 154 | 1.08e-11 | 63.2 |
Find 98 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTGAAAAGGATTGGGTTAA+AGG | 0.182504 | 1_3:-76728743 | Msa0141560:CDS |
TATCTACATATTTAAACTTT+TGG | 0.203502 | 1_3:+76727298 | None:intergenic |
GGCTTCTTTCTTCATTCTTC+AGG | 0.214826 | 1_3:-76728687 | Msa0141560:intron |
TTAAATATGTAGATATTATT+AGG | 0.226319 | 1_3:-76727290 | Msa0141560:exon |
AATTTAATTAAGTTACATTA+TGG | 0.226743 | 1_3:+76727085 | None:intergenic |
ATAAATTAGGATGGAGAAAT+TGG | 0.234772 | 1_3:-76728927 | Msa0141560:intron |
GATGATCATTGTAGCAATTA+TGG | 0.238191 | 1_3:-76727999 | Msa0141560:CDS |
GCAATGATTTGTCTACAATT+TGG | 0.240667 | 1_3:-76729743 | Msa0141560:CDS |
TTATCATCACTACCTTTCTT+TGG | 0.252134 | 1_3:-76727168 | Msa0141560:three_prime_UTR |
ATTTGTGATTGCAGTGTTAT+TGG | 0.259447 | 1_3:-76727538 | Msa0141560:intron |
ATCACGTAGAGTTGAGAAAT+TGG | 0.280355 | 1_3:-76727227 | Msa0141560:three_prime_UTR |
TCTCTCTATCAGTAGTATTA+TGG | 0.314109 | 1_3:+76729832 | None:intergenic |
TCATTATTGCCACCTTTGCT+TGG | 0.320554 | 1_3:-76728709 | Msa0141560:CDS |
CCTGAAAACACTACTGATTC+TGG | 0.323745 | 1_3:-76728764 | Msa0141560:CDS |
TAGGACTTTACTCAGTTCTA+TGG | 0.324315 | 1_3:-76727498 | Msa0141560:CDS |
ATAACCGGGCCCACACTTAA+TGG | 0.328176 | 1_3:+76727108 | None:intergenic |
GGAACTGTAATTACAGTTGC+TGG | 0.333568 | 1_3:-76728869 | Msa0141560:CDS |
TAAGTTACATTATGGATAAC+CGG | 0.335801 | 1_3:+76727093 | None:intergenic |
CATTATTGCCACCTTTGCTT+GGG | 0.365039 | 1_3:-76728708 | Msa0141560:CDS |
CAACCAATGCTCCAAGCATT+TGG | 0.368276 | 1_3:+76728463 | None:intergenic |
TGTAGAAAATGGAGTAATAT+TGG | 0.373183 | 1_3:-76727413 | Msa0141560:CDS |
ATGAAGTGTTGTGTAGAAAA+TGG | 0.377896 | 1_3:-76727424 | Msa0141560:CDS |
CTGATTCTGGTGAAAAGGAT+TGG | 0.390193 | 1_3:-76728751 | Msa0141560:CDS |
CACTACTGATTCTGGTGAAA+AGG | 0.391411 | 1_3:-76728756 | Msa0141560:CDS |
TAATAGCACATGAGTAGGTT+GGG | 0.409987 | 1_3:+76729114 | None:intergenic |
TACCTTTCTTTGGAAAACTT+TGG | 0.411135 | 1_3:-76727158 | Msa0141560:three_prime_UTR |
ATGATCATTGTAGCAATTAT+GGG | 0.413953 | 1_3:-76727998 | Msa0141560:CDS |
AGACAAATCATTGCTATGTA+AGG | 0.421535 | 1_3:+76729752 | None:intergenic |
CAGTTCCAATCACCTTTACT+TGG | 0.422944 | 1_3:+76728885 | None:intergenic |
AAATGATATTGAAATGCAAA+AGG | 0.427377 | 1_3:-76727362 | Msa0141560:CDS |
CACAGCTATAGTGTGTTCCT+TGG | 0.437061 | 1_3:-76728530 | Msa0141560:CDS |
AAGCCAAATGCTTGGAGCAT+TGG | 0.441831 | 1_3:-76728466 | Msa0141560:CDS |
TGATTCTGGTGAAAAGGATT+GGG | 0.443945 | 1_3:-76728750 | Msa0141560:CDS |
AGATGCCAAGTAAAGGTGAT+TGG | 0.445654 | 1_3:-76728890 | Msa0141560:CDS |
ATGTTCGTGTTGGGACTCCT+CGG | 0.448412 | 1_3:-76729439 | Msa0141560:CDS |
GCCATGACAAATGTCATTGC+TGG | 0.449617 | 1_3:+76729080 | None:intergenic |
AACATAAGAAATGTGATCCT+TGG | 0.453298 | 1_3:+76729469 | None:intergenic |
AGGACTTTACTCAGTTCTAT+GGG | 0.455974 | 1_3:-76727497 | Msa0141560:CDS |
GATCAGAACCTATACTATGC+TGG | 0.460553 | 1_3:-76729152 | Msa0141560:CDS |
TTGTCATTGGCAGGAAGATA+AGG | 0.461420 | 1_3:-76729492 | Msa0141560:intron |
GGTCTTACCTACTATGTTCA+AGG | 0.466312 | 1_3:-76728076 | Msa0141560:CDS |
CAAATGCTTGGAGCATTGGT+TGG | 0.475581 | 1_3:-76728462 | Msa0141560:CDS |
CTCTCAAGAACAATAGCAAA+TGG | 0.479507 | 1_3:+76729617 | None:intergenic |
AAATGCTTGGAGCATTGGTT+GGG | 0.486794 | 1_3:-76728461 | Msa0141560:CDS |
TTGAAAAGGAAATTATATTG+AGG | 0.487701 | 1_3:-76727050 | Msa0141560:three_prime_UTR |
ATTTCAACCCAGCATAGTAT+AGG | 0.492882 | 1_3:+76729144 | None:intergenic |
GGGATAGTCATGCAAAAGAA+AGG | 0.494971 | 1_3:-76728055 | Msa0141560:CDS |
CTAATAGCACATGAGTAGGT+TGG | 0.498278 | 1_3:+76729113 | None:intergenic |
TGTTCGTGTTGGGACTCCTC+GGG | 0.499429 | 1_3:-76729438 | Msa0141560:intron |
CATTTGCTATTGTTCTTGAG+AGG | 0.504801 | 1_3:-76729616 | Msa0141560:intron |
GAACTGTAATTACAGTTGCT+GGG | 0.505303 | 1_3:-76728868 | Msa0141560:CDS |
TCACGTAGAGTTGAGAAATT+GGG | 0.508042 | 1_3:-76727226 | Msa0141560:three_prime_UTR |
ACAGCTATAGTGTGTTCCTT+GGG | 0.509092 | 1_3:-76728529 | Msa0141560:CDS |
TTTATGCAAATGTTCGTGTT+GGG | 0.509361 | 1_3:-76729448 | Msa0141560:CDS |
GAGCAGGGTATAATATCATC+AGG | 0.517268 | 1_3:-76728097 | Msa0141560:intron |
AAAATTAAGATGCCAAGTAA+AGG | 0.520767 | 1_3:-76728897 | Msa0141560:CDS |
AGGACCATTAAGTGTGGGCC+CGG | 0.523031 | 1_3:-76727112 | Msa0141560:three_prime_UTR |
GAAAGGTAGTGATGATAATG+AGG | 0.529638 | 1_3:+76727173 | None:intergenic |
ATCAGAACCTATACTATGCT+GGG | 0.534041 | 1_3:-76729151 | Msa0141560:CDS |
GTTTATGCAAATGTTCGTGT+TGG | 0.539764 | 1_3:-76729449 | Msa0141560:CDS |
AATGATATTGAAATGCAAAA+GGG | 0.540111 | 1_3:-76727361 | Msa0141560:CDS |
GACTATCCCTTGAACATAGT+AGG | 0.543020 | 1_3:+76728069 | None:intergenic |
GGATAGTCATGCAAAAGAAA+GGG | 0.545870 | 1_3:-76728054 | Msa0141560:CDS |
AAATTCAGGCTGTGACATTG+AGG | 0.548667 | 1_3:-76728576 | Msa0141560:intron |
CCCAGCAATGACATTTGTCA+TGG | 0.557417 | 1_3:-76729081 | Msa0141560:CDS |
TGATTAGGACCATTAAGTGT+GGG | 0.561450 | 1_3:-76727117 | Msa0141560:three_prime_UTR |
GATGATAATGAGGATGAAGA+AGG | 0.563760 | 1_3:+76727183 | None:intergenic |
TGGAGCATAAGCCAAATGCT+TGG | 0.566635 | 1_3:-76728474 | Msa0141560:CDS |
AATTACAGTTGCTGGGGCCA+TGG | 0.571553 | 1_3:-76728861 | Msa0141560:CDS |
ATATTGGAAACAGTGATTGA+AGG | 0.577888 | 1_3:-76727397 | Msa0141560:CDS |
GAAAGAAGCCCAAGCAAAGG+TGG | 0.577910 | 1_3:+76728700 | None:intergenic |
AAGCAAAGGTGGCAATAATG+AGG | 0.583286 | 1_3:+76728711 | None:intergenic |
TAGAGTTGAGAAATTGGGAG+GGG | 0.583687 | 1_3:-76727221 | Msa0141560:three_prime_UTR |
AATTGATTGAAGTGTGCCCA+AGG | 0.589839 | 1_3:+76728513 | None:intergenic |
AATAGCACATGAGTAGGTTG+GGG | 0.594825 | 1_3:+76729115 | None:intergenic |
TATAGGTTCTGATCAATCAC+AGG | 0.594938 | 1_3:+76729161 | None:intergenic |
ATTGCTAATAGCACATGAGT+AGG | 0.596686 | 1_3:+76729109 | None:intergenic |
AACTGTAATTACAGTTGCTG+GGG | 0.596912 | 1_3:-76728867 | Msa0141560:CDS |
GATATTGAAATGCAAAAGGG+TGG | 0.602633 | 1_3:-76727358 | Msa0141560:CDS |
GCTACAATGATCATCATCAA+AGG | 0.605705 | 1_3:+76728007 | None:intergenic |
AAGTTACATTATGGATAACC+GGG | 0.607834 | 1_3:+76727094 | None:intergenic |
CCATGACAAATGTCATTGCT+GGG | 0.609642 | 1_3:+76729081 | None:intergenic |
TGGTATGAACATAATAACAA+AGG | 0.615728 | 1_3:-76729714 | Msa0141560:CDS |
GTCTTACCTACTATGTTCAA+GGG | 0.621110 | 1_3:-76728075 | Msa0141560:CDS |
TTGATTAGGACCATTAAGTG+TGG | 0.624939 | 1_3:-76727118 | Msa0141560:three_prime_UTR |
CGTAGAGTTGAGAAATTGGG+AGG | 0.627084 | 1_3:-76727223 | Msa0141560:three_prime_UTR |
GAAGAAAGAAGCCCAAGCAA+AGG | 0.631452 | 1_3:+76728697 | None:intergenic |
TAATACTACTGATAGAGAGA+AGG | 0.633010 | 1_3:-76729829 | Msa0141560:five_prime_UTR |
TGAAGAAGAGACAATAACTG+AGG | 0.638287 | 1_3:-76727449 | Msa0141560:CDS |
GAAGAAGAGACAATAACTGA+GGG | 0.639766 | 1_3:-76727448 | Msa0141560:CDS |
GAACATAGTGACTCATTCCA+CGG | 0.650720 | 1_3:+76729681 | None:intergenic |
TTGGCAGGAAGATAAGGCCA+AGG | 0.651054 | 1_3:-76729486 | Msa0141560:intron |
AGAAACAGAGTTGTATACAG+AGG | 0.655104 | 1_3:+76729868 | None:intergenic |
GTAGAGTTGAGAAATTGGGA+GGG | 0.658226 | 1_3:-76727222 | Msa0141560:three_prime_UTR |
TTTGTATAATGTCATCACCA+TGG | 0.663821 | 1_3:+76728844 | None:intergenic |
GGACTTTACTCAGTTCTATG+GGG | 0.681459 | 1_3:-76727496 | Msa0141560:CDS |
ACAAAGGTTTCACTCAACCG+TGG | 0.684285 | 1_3:-76729698 | Msa0141560:CDS |
ATGGTGATGACATTATACAA+AGG | 0.703249 | 1_3:-76728842 | Msa0141560:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTGTTATTGTTTTTATT+AGG | - | chr1_3:76727757-76727776 | Msa0141560:intron | 10.0% |
!! | AAAACATAAAAAGAATATAA+AGG | + | chr1_3:76727962-76727981 | None:intergenic | 10.0% |
!!! | TTTATATTCTTTTTATGTTT+TGG | - | chr1_3:76727961-76727980 | Msa0141560:intron | 10.0% |
!!! | AATTTAAAACTTTGATAAAA+GGG | + | chr1_3:76728546-76728565 | None:intergenic | 10.0% |
!!! | GTTTTATTTTATTTTTGTAA+TGG | - | chr1_3:76729027-76729046 | Msa0141560:intron | 10.0% |
!!! | AAAATAATAAAGCATTTAAA+AGG | - | chr1_3:76729302-76729321 | Msa0141560:intron | 10.0% |
!! | TTAAATATGTAGATATTATT+AGG | - | chr1_3:76729651-76729670 | Msa0141560:CDS | 10.0% |
!! | AATTTAATTAAGTTACATTA+TGG | + | chr1_3:76729859-76729878 | None:intergenic | 10.0% |
!!! | AACAAATTTTAGAACATTTT+TGG | + | chr1_3:76727745-76727764 | None:intergenic | 15.0% |
!! | TAAAAAGAATATAAAGGAAA+AGG | + | chr1_3:76727956-76727975 | None:intergenic | 15.0% |
!!! | ATTTAAAACTTTGATAAAAG+GGG | + | chr1_3:76728545-76728564 | None:intergenic | 15.0% |
!!! | CAATTTAAAACTTTGATAAA+AGG | + | chr1_3:76728547-76728566 | None:intergenic | 15.0% |
!! | AAACACTTTATTATATAACA+TGG | + | chr1_3:76729011-76729030 | None:intergenic | 15.0% |
!!! | ATTTATCTCCATTATAATTT+TGG | - | chr1_3:76729057-76729076 | Msa0141560:intron | 15.0% |
!!! | TTTATCTCCATTATAATTTT+GGG | - | chr1_3:76729058-76729077 | Msa0141560:intron | 15.0% |
!!! | TCATAAAAAAGCATATATAT+AGG | - | chr1_3:76729336-76729355 | Msa0141560:intron | 15.0% |
!!! | TATCTACATATTTAAACTTT+TGG | + | chr1_3:76729646-76729665 | None:intergenic | 15.0% |
!! | TTATCATTAAGAATGAATGA+TGG | + | chr1_3:76727354-76727373 | None:intergenic | 20.0% |
!! | AATTGTTCAATCTTAATCAA+TGG | - | chr1_3:76727661-76727680 | Msa0141560:intron | 20.0% |
!! | TGGTATTAAAAGATTTAACT+TGG | - | chr1_3:76727981-76728000 | Msa0141560:CDS | 20.0% |
!!! | AAGATTTAACTTGGTTTATT+TGG | - | chr1_3:76727990-76728009 | Msa0141560:CDS | 20.0% |
!!! | TGGTTTATTTGGAATAAATT+AGG | - | chr1_3:76728001-76728020 | Msa0141560:CDS | 20.0% |
!!! | TTATTTGGAATAAATTAGGA+TGG | - | chr1_3:76728005-76728024 | Msa0141560:CDS | 20.0% |
!!! | TCTATTTTGTGATTAAATTC+AGG | - | chr1_3:76728351-76728370 | Msa0141560:intron | 20.0% |
!!! | TTTAAAACTTTGATAAAAGG+GGG | + | chr1_3:76728544-76728563 | None:intergenic | 20.0% |
!!! | TTTTATTTTTGTAATGGAAG+TGG | - | chr1_3:76729033-76729052 | Msa0141560:intron | 20.0% |
!!! | TTATCTCCATTATAATTTTG+GGG | - | chr1_3:76729059-76729078 | Msa0141560:intron | 20.0% |
!!! | TTTTTTCCCCAAAATTATAA+TGG | + | chr1_3:76729068-76729087 | None:intergenic | 20.0% |
!!! | ATAATTTTGGGGAAAAAAAT+TGG | - | chr1_3:76729070-76729089 | Msa0141560:CDS | 20.0% |
!!! | CAAGGTTTTAATTTTATTTG+TGG | + | chr1_3:76729175-76729194 | None:intergenic | 20.0% |
!!! | AAAAAGCATATATATAGGAA+CGG | - | chr1_3:76729341-76729360 | Msa0141560:intron | 20.0% |
!! | AAATGATATTGAAATGCAAA+AGG | - | chr1_3:76729579-76729598 | Msa0141560:intron | 20.0% |
!! | AATGATATTGAAATGCAAAA+GGG | - | chr1_3:76729580-76729599 | Msa0141560:intron | 20.0% |
!! | TTGAAAAGGAAATTATATTG+AGG | - | chr1_3:76729891-76729910 | Msa0141560:five_prime_UTR | 20.0% |
! | AGAGAGAAGGAAAAAAAAAA+TGG | - | chr1_3:76727125-76727144 | Msa0141560:three_prime_UTR | 25.0% |
! | AGAAGGAAAAAAAAAATGGA+AGG | - | chr1_3:76727129-76727148 | Msa0141560:three_prime_UTR | 25.0% |
! | AAAAAAAAATGGAAGGAGAT+AGG | - | chr1_3:76727136-76727155 | Msa0141560:three_prime_UTR | 25.0% |
! | TGGTATGAACATAATAACAA+AGG | - | chr1_3:76727227-76727246 | Msa0141560:three_prime_UTR | 25.0% |
! | ATCATTAGATCGATATTGAA+CGG | - | chr1_3:76727612-76727631 | Msa0141560:intron | 25.0% |
! | ATAAATTAGGATGGAGAAAT+TGG | - | chr1_3:76728014-76728033 | Msa0141560:CDS | 25.0% |
! | AAAATTAAGATGCCAAGTAA+AGG | - | chr1_3:76728044-76728063 | Msa0141560:CDS | 25.0% |
!!! | TTTTCAGGTTCATAATTTCT+AGG | + | chr1_3:76728165-76728184 | None:intergenic | 25.0% |
! | TTAAAACTTTGATAAAAGGG+GGG | + | chr1_3:76728543-76728562 | None:intergenic | 25.0% |
! | CTCGTCACTAAATTTATTAA+CGG | - | chr1_3:76728633-76728652 | Msa0141560:intron | 25.0% |
! | CAAAAAAAAACAATATGTCG+CGG | - | chr1_3:76728731-76728750 | Msa0141560:CDS | 25.0% |
! | ATCAACAAGCATAAAAAATG+GGG | + | chr1_3:76728787-76728806 | None:intergenic | 25.0% |
! | CATCAACAAGCATAAAAAAT+GGG | + | chr1_3:76728788-76728807 | None:intergenic | 25.0% |
! | TCATCAACAAGCATAAAAAA+TGG | + | chr1_3:76728789-76728808 | None:intergenic | 25.0% |
!! | GTATTAATGGATGTAAACTT+TGG | - | chr1_3:76728820-76728839 | Msa0141560:CDS | 25.0% |
! | ATGATCATTGTAGCAATTAT+GGG | - | chr1_3:76728943-76728962 | Msa0141560:intron | 25.0% |
!!! | CAAGATATAATTTTTCAGCA+AGG | + | chr1_3:76728978-76728997 | None:intergenic | 25.0% |
! | CTTGCTGAAAAATTATATCT+TGG | - | chr1_3:76728976-76728995 | Msa0141560:intron | 25.0% |
! | CTGAAAAATTATATCTTGGA+GGG | - | chr1_3:76728980-76728999 | Msa0141560:intron | 25.0% |
! | TTGATATGTTCATAGTTCAT+TGG | + | chr1_3:76729204-76729223 | None:intergenic | 25.0% |
! | TGTAGAAAATGGAGTAATAT+TGG | - | chr1_3:76729528-76729547 | Msa0141560:intron | 25.0% |
! | TAAGTTACATTATGGATAAC+CGG | + | chr1_3:76729851-76729870 | None:intergenic | 25.0% |
!! | TTTTGCATACTTTGTTGAAA+AGG | - | chr1_3:76729877-76729896 | Msa0141560:five_prime_UTR | 25.0% |
TCTCTCTATCAGTAGTATTA+TGG | + | chr1_3:76727112-76727131 | None:intergenic | 30.0% | |
TAATACTACTGATAGAGAGA+AGG | - | chr1_3:76727112-76727131 | Msa0141560:three_prime_UTR | 30.0% | |
AGACAAATCATTGCTATGTA+AGG | + | chr1_3:76727192-76727211 | None:intergenic | 30.0% | |
! | GCAATGATTTGTCTACAATT+TGG | - | chr1_3:76727198-76727217 | Msa0141560:three_prime_UTR | 30.0% |
AACATAAGAAATGTGATCCT+TGG | + | chr1_3:76727475-76727494 | None:intergenic | 30.0% | |
TTTATGCAAATGTTCGTGTT+GGG | - | chr1_3:76727493-76727512 | Msa0141560:CDS | 30.0% | |
GATTTAGATGACATGATTGT+AGG | + | chr1_3:76727595-76727614 | None:intergenic | 30.0% | |
TTTGTATAATGTCATCACCA+TGG | + | chr1_3:76728100-76728119 | None:intergenic | 30.0% | |
! | ATGGTGATGACATTATACAA+AGG | - | chr1_3:76728099-76728118 | Msa0141560:intron | 30.0% |
! | AATTGCTGTGACTTTTGTTA+TGG | - | chr1_3:76728447-76728466 | Msa0141560:CDS | 30.0% |
!!! | GAGTTTTTTTAGTAGTGTGA+TGG | - | chr1_3:76728688-76728707 | Msa0141560:CDS | 30.0% |
!! | TTTTTAGTAGTGTGATGGTT+TGG | - | chr1_3:76728693-76728712 | Msa0141560:CDS | 30.0% |
! | CTTGTTGATGAATTTATCGA+GGG | - | chr1_3:76728798-76728817 | Msa0141560:CDS | 30.0% |
!! | GAATTTATCGAGGGTATTAA+TGG | - | chr1_3:76728807-76728826 | Msa0141560:CDS | 30.0% |
GATGATCATTGTAGCAATTA+TGG | - | chr1_3:76728942-76728961 | Msa0141560:intron | 30.0% | |
GCTGAAAAATTATATCTTGG+AGG | - | chr1_3:76728979-76728998 | Msa0141560:intron | 30.0% | |
TCACATCGCAATTATAATTG+TGG | + | chr1_3:76729117-76729136 | None:intergenic | 30.0% | |
CTTTAATATTGCATCACAAG+TGG | - | chr1_3:76729148-76729167 | Msa0141560:CDS | 30.0% | |
ATAGTTCATTGGATTGAACA+AGG | + | chr1_3:76729193-76729212 | None:intergenic | 30.0% | |
ATTTGTGATTGCAGTGTTAT+TGG | - | chr1_3:76729403-76729422 | Msa0141560:intron | 30.0% | |
!! | ATGAAGTGTTGTGTAGAAAA+TGG | - | chr1_3:76729517-76729536 | Msa0141560:intron | 30.0% |
ATATTGGAAACAGTGATTGA+AGG | - | chr1_3:76729544-76729563 | Msa0141560:intron | 30.0% | |
TTATCATCACTACCTTTCTT+TGG | - | chr1_3:76729773-76729792 | Msa0141560:CDS | 30.0% | |
! | TACCTTTCTTTGGAAAACTT+TGG | - | chr1_3:76729783-76729802 | Msa0141560:CDS | 30.0% |
! | TACCAAAGTTTTCCAAAGAA+AGG | + | chr1_3:76729788-76729807 | None:intergenic | 30.0% |
!! | CTTTGGTAAAGCATTTTTAG+TGG | - | chr1_3:76729800-76729819 | Msa0141560:CDS | 30.0% |
!!! | AGCATTTTTAGTGGTTGATT+AGG | - | chr1_3:76729809-76729828 | Msa0141560:exon | 30.0% |
AAGTTACATTATGGATAACC+GGG | + | chr1_3:76729850-76729869 | None:intergenic | 30.0% | |
AGAAACAGAGTTGTATACAG+AGG | + | chr1_3:76727076-76727095 | None:intergenic | 35.0% | |
!!! | TGTCTACAATTTGGTTTTGC+TGG | - | chr1_3:76727207-76727226 | Msa0141560:three_prime_UTR | 35.0% |
CTCTCAAGAACAATAGCAAA+TGG | + | chr1_3:76727327-76727346 | None:intergenic | 35.0% | |
!! | CATTTGCTATTGTTCTTGAG+AGG | - | chr1_3:76727325-76727344 | Msa0141560:CDS | 35.0% |
! | CACACTCTATTTCTTGTCAT+TGG | - | chr1_3:76727436-76727455 | Msa0141560:CDS | 35.0% |
GTTTATGCAAATGTTCGTGT+TGG | - | chr1_3:76727492-76727511 | Msa0141560:CDS | 35.0% | |
! | TATAGGTTCTGATCAATCAC+AGG | + | chr1_3:76727783-76727802 | None:intergenic | 35.0% |
ATCAGAACCTATACTATGCT+GGG | - | chr1_3:76727790-76727809 | Msa0141560:intron | 35.0% | |
ATTTCAACCCAGCATAGTAT+AGG | + | chr1_3:76727800-76727819 | None:intergenic | 35.0% | |
TAATAGCACATGAGTAGGTT+GGG | + | chr1_3:76727830-76727849 | None:intergenic | 35.0% | |
ATTGCTAATAGCACATGAGT+AGG | + | chr1_3:76727835-76727854 | None:intergenic | 35.0% | |
!! | TTGTCATGGCAGTTATTTTC+AGG | - | chr1_3:76727874-76727893 | Msa0141560:intron | 35.0% |
GAACTGTAATTACAGTTGCT+GGG | - | chr1_3:76728073-76728092 | Msa0141560:CDS | 35.0% | |
AACTGTAATTACAGTTGCTG+GGG | - | chr1_3:76728074-76728093 | Msa0141560:CDS | 35.0% | |
TGATTCTGGTGAAAAGGATT+GGG | - | chr1_3:76728191-76728210 | Msa0141560:intron | 35.0% | |
! | AGAAATATCGACTGTGATCT+TGG | + | chr1_3:76728757-76728776 | None:intergenic | 35.0% |
! | GCTTGTTGATGAATTTATCG+AGG | - | chr1_3:76728797-76728816 | Msa0141560:CDS | 35.0% |
GTCTTACCTACTATGTTCAA+GGG | - | chr1_3:76728866-76728885 | Msa0141560:CDS | 35.0% | |
GGATAGTCATGCAAAAGAAA+GGG | - | chr1_3:76728887-76728906 | Msa0141560:CDS | 35.0% | |
GCTACAATGATCATCATCAA+AGG | + | chr1_3:76728937-76728956 | None:intergenic | 35.0% | |
AAGCATATATATAGGAACGG+TGG | - | chr1_3:76729344-76729363 | Msa0141560:intron | 35.0% | |
!!! | GGAGCTATTTTGATCGTAAT+AGG | - | chr1_3:76729424-76729443 | Msa0141560:intron | 35.0% |
TAGGACTTTACTCAGTTCTA+TGG | - | chr1_3:76729443-76729462 | Msa0141560:CDS | 35.0% | |
AGGACTTTACTCAGTTCTAT+GGG | - | chr1_3:76729444-76729463 | Msa0141560:CDS | 35.0% | |
TGAAGAAGAGACAATAACTG+AGG | - | chr1_3:76729492-76729511 | Msa0141560:intron | 35.0% | |
GAAGAAGAGACAATAACTGA+GGG | - | chr1_3:76729493-76729512 | Msa0141560:intron | 35.0% | |
GATATTGAAATGCAAAAGGG+TGG | - | chr1_3:76729583-76729602 | Msa0141560:intron | 35.0% | |
!! | TGGAGCTACTAAAGTTTTGA+GGG | - | chr1_3:76729603-76729622 | Msa0141560:intron | 35.0% |
ATCACGTAGAGTTGAGAAAT+TGG | - | chr1_3:76729714-76729733 | Msa0141560:CDS | 35.0% | |
TCACGTAGAGTTGAGAAATT+GGG | - | chr1_3:76729715-76729734 | Msa0141560:CDS | 35.0% | |
! | GATGATAATGAGGATGAAGA+AGG | + | chr1_3:76729761-76729780 | None:intergenic | 35.0% |
! | GAAAGGTAGTGATGATAATG+AGG | + | chr1_3:76729771-76729790 | None:intergenic | 35.0% |
TTGATTAGGACCATTAAGTG+TGG | - | chr1_3:76729823-76729842 | Msa0141560:five_prime_UTR | 35.0% | |
TGATTAGGACCATTAAGTGT+GGG | - | chr1_3:76729824-76729843 | Msa0141560:five_prime_UTR | 35.0% | |
GAACATAGTGACTCATTCCA+CGG | + | chr1_3:76727263-76727282 | None:intergenic | 40.0% | |
! | CTCTATTTCTTGTCATTGGC+AGG | - | chr1_3:76727440-76727459 | Msa0141560:CDS | 40.0% |
TTGTCATTGGCAGGAAGATA+AGG | - | chr1_3:76727449-76727468 | Msa0141560:CDS | 40.0% | |
GATCAGAACCTATACTATGC+TGG | - | chr1_3:76727789-76727808 | Msa0141560:intron | 40.0% | |
AATAGCACATGAGTAGGTTG+GGG | + | chr1_3:76727829-76727848 | None:intergenic | 40.0% | |
CTAATAGCACATGAGTAGGT+TGG | + | chr1_3:76727831-76727850 | None:intergenic | 40.0% | |
CCATGACAAATGTCATTGCT+GGG | + | chr1_3:76727863-76727882 | None:intergenic | 40.0% | |
AGATGCCAAGTAAAGGTGAT+TGG | - | chr1_3:76728051-76728070 | Msa0141560:CDS | 40.0% | |
CAGTTCCAATCACCTTTACT+TGG | + | chr1_3:76728059-76728078 | None:intergenic | 40.0% | |
GGAACTGTAATTACAGTTGC+TGG | - | chr1_3:76728072-76728091 | Msa0141560:CDS | 40.0% | |
! | CCAGAATCAGTAGTGTTTTC+AGG | + | chr1_3:76728180-76728199 | None:intergenic | 40.0% |
!! | CCTGAAAACACTACTGATTC+TGG | - | chr1_3:76728177-76728196 | Msa0141560:intron | 40.0% |
!! | CACTACTGATTCTGGTGAAA+AGG | - | chr1_3:76728185-76728204 | Msa0141560:intron | 40.0% |
CTGATTCTGGTGAAAAGGAT+TGG | - | chr1_3:76728190-76728209 | Msa0141560:intron | 40.0% | |
GGTGAAAAGGATTGGGTTAA+AGG | - | chr1_3:76728198-76728217 | Msa0141560:intron | 40.0% | |
AAGCAAAGGTGGCAATAATG+AGG | + | chr1_3:76728233-76728252 | None:intergenic | 40.0% | |
TCATTATTGCCACCTTTGCT+TGG | - | chr1_3:76728232-76728251 | Msa0141560:intron | 40.0% | |
CATTATTGCCACCTTTGCTT+GGG | - | chr1_3:76728233-76728252 | Msa0141560:intron | 40.0% | |
GGCTTCTTTCTTCATTCTTC+AGG | - | chr1_3:76728254-76728273 | Msa0141560:intron | 40.0% | |
AAATTCAGGCTGTGACATTG+AGG | - | chr1_3:76728365-76728384 | Msa0141560:intron | 40.0% | |
ACAGCTATAGTGTGTTCCTT+GGG | - | chr1_3:76728412-76728431 | Msa0141560:intron | 40.0% | |
AATTGATTGAAGTGTGCCCA+AGG | + | chr1_3:76728431-76728450 | None:intergenic | 40.0% | |
!! | AAATGCTTGGAGCATTGGTT+GGG | - | chr1_3:76728480-76728499 | Msa0141560:CDS | 40.0% |
GATGTAAACTTTGGTGAGCA+GGG | - | chr1_3:76728829-76728848 | Msa0141560:CDS | 40.0% | |
GAGCAGGGTATAATATCATC+AGG | - | chr1_3:76728844-76728863 | Msa0141560:CDS | 40.0% | |
GGTCTTACCTACTATGTTCA+AGG | - | chr1_3:76728865-76728884 | Msa0141560:CDS | 40.0% | |
GACTATCCCTTGAACATAGT+AGG | + | chr1_3:76728875-76728894 | None:intergenic | 40.0% | |
GGGATAGTCATGCAAAAGAA+AGG | - | chr1_3:76728886-76728905 | Msa0141560:CDS | 40.0% | |
CTGAAAGCAGTGACAAAAAC+TGG | + | chr1_3:76728913-76728932 | None:intergenic | 40.0% | |
AGGAACGGTGGTAAACAATT+TGG | - | chr1_3:76729356-76729375 | Msa0141560:intron | 40.0% | |
GGACTTTACTCAGTTCTATG+GGG | - | chr1_3:76729445-76729464 | Msa0141560:CDS | 40.0% | |
! | GTGGAGCTACTAAAGTTTTG+AGG | - | chr1_3:76729602-76729621 | Msa0141560:intron | 40.0% |
GTAGAGTTGAGAAATTGGGA+GGG | - | chr1_3:76729719-76729738 | Msa0141560:CDS | 40.0% | |
TAGAGTTGAGAAATTGGGAG+GGG | - | chr1_3:76729720-76729739 | Msa0141560:CDS | 40.0% | |
ACAAAGGTTTCACTCAACCG+TGG | - | chr1_3:76727243-76727262 | Msa0141560:three_prime_UTR | 45.0% | |
!! | GTCAGAAAAGTACTAACCCG+AGG | + | chr1_3:76727522-76727541 | None:intergenic | 45.0% |
CCCAGCAATGACATTTGTCA+TGG | - | chr1_3:76727860-76727879 | Msa0141560:intron | 45.0% | |
GCCATGACAAATGTCATTGC+TGG | + | chr1_3:76727864-76727883 | None:intergenic | 45.0% | |
GAAGAAAGAAGCCCAAGCAA+AGG | + | chr1_3:76728247-76728266 | None:intergenic | 45.0% | |
CACAGCTATAGTGTGTTCCT+TGG | - | chr1_3:76728411-76728430 | Msa0141560:intron | 45.0% | |
TGGAGCATAAGCCAAATGCT+TGG | - | chr1_3:76728467-76728486 | Msa0141560:CDS | 45.0% | |
AAGCCAAATGCTTGGAGCAT+TGG | - | chr1_3:76728475-76728494 | Msa0141560:CDS | 45.0% | |
CAACCAATGCTCCAAGCATT+TGG | + | chr1_3:76728481-76728500 | None:intergenic | 45.0% | |
!! | CAAATGCTTGGAGCATTGGT+TGG | - | chr1_3:76728479-76728498 | Msa0141560:CDS | 45.0% |
!! | GTAGTGTGATGGTTTGGTTC+TGG | - | chr1_3:76728699-76728718 | Msa0141560:CDS | 45.0% |
GGATGTAAACTTTGGTGAGC+AGG | - | chr1_3:76728828-76728847 | Msa0141560:CDS | 45.0% | |
CGTAGAGTTGAGAAATTGGG+AGG | - | chr1_3:76729718-76729737 | Msa0141560:CDS | 45.0% | |
!! | TTATAAATTAATTAAGAAAT+TGG | - | chr1_3:76728288-76728307 | Msa0141560:intron | 5.0% |
TTGGCAGGAAGATAAGGCCA+AGG | - | chr1_3:76727455-76727474 | Msa0141560:CDS | 50.0% | |
ATGTTCGTGTTGGGACTCCT+CGG | - | chr1_3:76727502-76727521 | Msa0141560:CDS | 50.0% | |
AATTACAGTTGCTGGGGCCA+TGG | - | chr1_3:76728080-76728099 | Msa0141560:CDS | 50.0% | |
GAAAGAAGCCCAAGCAAAGG+TGG | + | chr1_3:76728244-76728263 | None:intergenic | 50.0% | |
!! | GTGTGATGGTTTGGTTCTGG+TGG | - | chr1_3:76728702-76728721 | Msa0141560:CDS | 50.0% |
ATAACCGGGCCCACACTTAA+TGG | + | chr1_3:76729836-76729855 | None:intergenic | 50.0% | |
TGTTCGTGTTGGGACTCCTC+GGG | - | chr1_3:76727503-76727522 | Msa0141560:CDS | 55.0% | |
AGGGGGGAGACTTACAGCAT+AGG | + | chr1_3:76728527-76728546 | None:intergenic | 55.0% | |
AGGACCATTAAGTGTGGGCC+CGG | - | chr1_3:76729829-76729848 | Msa0141560:five_prime_UTR | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 76727041 | 76729922 | 76727041 | ID=Msa0141560;Name=Msa0141560 |
chr1_3 | mRNA | 76727041 | 76729922 | 76727041 | ID=Msa0141560-mRNA-1;Parent=Msa0141560;Name=Msa0141560-mRNA-1;_AED=0.12;_eAED=0.12;_QI=103|1|1|1|1|1|7|268|394 |
chr1_3 | exon | 76727041 | 76727546 | 76727041 | ID=Msa0141560-mRNA-1:exon:26746;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76727962 | 76728113 | 76727962 | ID=Msa0141560-mRNA-1:exon:26745;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76728432 | 76728590 | 76728432 | ID=Msa0141560-mRNA-1:exon:26744;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76728688 | 76728940 | 76728688 | ID=Msa0141560-mRNA-1:exon:26743;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76729068 | 76729184 | 76729068 | ID=Msa0141560-mRNA-1:exon:26742;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76729439 | 76729501 | 76729439 | ID=Msa0141560-mRNA-1:exon:26741;Parent=Msa0141560-mRNA-1 |
chr1_3 | exon | 76729617 | 76729922 | 76729617 | ID=Msa0141560-mRNA-1:exon:26740;Parent=Msa0141560-mRNA-1 |
chr1_3 | five_prime_UTR | 76729820 | 76729922 | 76729820 | ID=Msa0141560-mRNA-1:five_prime_utr;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76729617 | 76729819 | 76729617 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76729439 | 76729501 | 76729439 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76729068 | 76729184 | 76729068 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76728688 | 76728940 | 76728688 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76728432 | 76728590 | 76728432 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76727962 | 76728113 | 76727962 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | CDS | 76727309 | 76727546 | 76727309 | ID=Msa0141560-mRNA-1:cds;Parent=Msa0141560-mRNA-1 |
chr1_3 | three_prime_UTR | 76727041 | 76727308 | 76727041 | ID=Msa0141560-mRNA-1:three_prime_utr;Parent=Msa0141560-mRNA-1 |
Gene Sequence |
Protein sequence |