Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0143160 | XP_003625810.1 | 96.798 | 406 | 11 | 2 | 1 | 405 | 1 | 405 | 0.0 | 801 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0143160 | sp|Q9SJN0|ABI5_ARATH | 47.661 | 449 | 148 | 12 | 1 | 400 | 1 | 411 | 7.70e-106 | 323 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0143160 | G7L631 | 96.798 | 406 | 11 | 2 | 1 | 405 | 1 | 405 | 0.0 | 801 |
Gene ID | Type | Classification |
---|---|---|
Msa0143160 | TF | bZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0143160 | Msa1164680 | 0.850969 | 1.203899e-60 | -8.615850e-47 |
Msa0143160 | Msa1343580 | 0.827354 | 1.638988e-54 | -8.615850e-47 |
Msa0143160 | Msa1386130 | 0.855532 | 5.923040e-62 | -8.615850e-47 |
Msa0143160 | Msa1427680 | 0.847996 | 8.120265e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0143160 | MtrunA17_Chr7g0266211 | 96.798 | 406 | 11 | 2 | 1 | 405 | 1 | 405 | 0.0 | 801 |
Msa0143160 | MtrunA17_Chr4g0044771 | 34.699 | 415 | 152 | 17 | 43 | 410 | 22 | 364 | 5.51e-46 | 163 |
Msa0143160 | MtrunA17_Chr8g0355121 | 35.112 | 356 | 134 | 11 | 37 | 388 | 23 | 285 | 8.73e-46 | 161 |
Msa0143160 | MtrunA17_Chr3g0080341 | 35.854 | 357 | 152 | 11 | 38 | 394 | 20 | 299 | 2.25e-44 | 157 |
Msa0143160 | MtrunA17_Chr2g0321381 | 50.350 | 143 | 57 | 6 | 43 | 185 | 26 | 154 | 2.67e-36 | 135 |
Msa0143160 | MtrunA17_Chr2g0321381 | 46.154 | 143 | 48 | 4 | 266 | 393 | 161 | 289 | 5.12e-19 | 87.4 |
Msa0143160 | MtrunA17_Chr2g0321411 | 48.551 | 138 | 59 | 5 | 44 | 181 | 13 | 138 | 8.25e-32 | 122 |
Msa0143160 | MtrunA17_Chr2g0321411 | 55.556 | 108 | 38 | 2 | 298 | 401 | 165 | 266 | 2.88e-29 | 115 |
Msa0143160 | MtrunA17_Chr3g0133971 | 47.407 | 135 | 49 | 4 | 44 | 178 | 32 | 144 | 1.73e-27 | 113 |
Msa0143160 | MtrunA17_Chr3g0133971 | 44.444 | 153 | 68 | 4 | 280 | 426 | 283 | 424 | 1.45e-21 | 96.7 |
Msa0143160 | MtrunA17_Chr6g0460301 | 38.255 | 149 | 69 | 3 | 41 | 182 | 18 | 150 | 4.78e-21 | 93.6 |
Msa0143160 | MtrunA17_Chr7g0254991 | 35.766 | 137 | 66 | 4 | 44 | 178 | 21 | 137 | 1.27e-17 | 83.6 |
Msa0143160 | MtrunA17_Chr7g0254991 | 67.164 | 67 | 20 | 2 | 330 | 395 | 233 | 298 | 2.05e-17 | 82.8 |
Msa0143160 | MtrunA17_Chr4g0051101 | 37.398 | 123 | 65 | 2 | 286 | 402 | 71 | 187 | 9.99e-16 | 75.5 |
Msa0143160 | MtrunA17_Chr5g0440841 | 36.842 | 133 | 66 | 2 | 44 | 176 | 27 | 141 | 7.77e-13 | 68.6 |
Msa0143160 | MtrunA17_Chr5g0440841 | 58.621 | 58 | 24 | 0 | 331 | 388 | 184 | 241 | 4.33e-11 | 63.2 |
Msa0143160 | MtrunA17_Chr1g0201751 | 52.239 | 67 | 32 | 0 | 340 | 406 | 157 | 223 | 2.61e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0143160 | AT2G36270.3 | 47.357 | 454 | 152 | 12 | 1 | 405 | 1 | 416 | 1.40e-107 | 325 |
Msa0143160 | AT2G36270.1 | 47.661 | 449 | 148 | 12 | 1 | 400 | 1 | 411 | 7.83e-107 | 323 |
Msa0143160 | AT2G36270.2 | 47.661 | 449 | 148 | 12 | 1 | 400 | 1 | 411 | 7.83e-107 | 323 |
Msa0143160 | AT1G45249.1 | 37.055 | 421 | 185 | 17 | 38 | 412 | 21 | 407 | 1.17e-49 | 174 |
Msa0143160 | AT1G45249.7 | 36.867 | 415 | 183 | 16 | 44 | 412 | 41 | 422 | 1.49e-49 | 174 |
Msa0143160 | AT1G45249.6 | 36.867 | 415 | 183 | 16 | 44 | 412 | 41 | 422 | 1.49e-49 | 174 |
Msa0143160 | AT1G45249.3 | 36.277 | 419 | 179 | 16 | 38 | 402 | 21 | 405 | 2.43e-46 | 166 |
Msa0143160 | AT1G49720.1 | 31.282 | 390 | 224 | 9 | 29 | 401 | 6 | 368 | 5.70e-34 | 131 |
Msa0143160 | AT1G49720.3 | 31.282 | 390 | 224 | 9 | 29 | 401 | 6 | 368 | 5.70e-34 | 131 |
Msa0143160 | AT3G44460.1 | 51.408 | 142 | 53 | 4 | 38 | 178 | 35 | 161 | 4.39e-31 | 122 |
Msa0143160 | AT3G44460.1 | 51.961 | 102 | 49 | 0 | 321 | 422 | 224 | 325 | 3.95e-18 | 85.5 |
Msa0143160 | AT3G56850.1 | 47.368 | 152 | 60 | 5 | 27 | 178 | 5 | 136 | 1.58e-27 | 111 |
Msa0143160 | AT3G56850.1 | 67.797 | 59 | 18 | 1 | 331 | 388 | 211 | 269 | 1.56e-15 | 77.4 |
Msa0143160 | AT1G49720.2 | 41.212 | 165 | 71 | 5 | 29 | 181 | 6 | 156 | 5.63e-27 | 112 |
Msa0143160 | AT1G49720.2 | 57.746 | 71 | 30 | 0 | 331 | 401 | 298 | 368 | 1.79e-16 | 81.3 |
Msa0143160 | AT5G42910.1 | 28.354 | 395 | 205 | 13 | 26 | 397 | 7 | 346 | 1.54e-26 | 110 |
Msa0143160 | AT3G19290.4 | 44.138 | 145 | 72 | 4 | 38 | 178 | 34 | 173 | 3.90e-25 | 107 |
Msa0143160 | AT3G19290.4 | 46.903 | 113 | 47 | 3 | 289 | 401 | 309 | 408 | 7.11e-18 | 85.9 |
Msa0143160 | AT3G19290.3 | 44.138 | 145 | 72 | 4 | 38 | 178 | 34 | 173 | 7.13e-25 | 106 |
Msa0143160 | AT3G19290.3 | 43.165 | 139 | 56 | 5 | 289 | 426 | 309 | 425 | 7.97e-18 | 85.9 |
Msa0143160 | AT4G34000.3 | 41.916 | 167 | 67 | 6 | 38 | 179 | 27 | 188 | 7.31e-25 | 106 |
Msa0143160 | AT4G34000.3 | 51.765 | 85 | 34 | 1 | 329 | 406 | 357 | 441 | 8.29e-17 | 82.8 |
Msa0143160 | AT4G34000.1 | 41.765 | 170 | 69 | 6 | 35 | 179 | 24 | 188 | 7.49e-25 | 106 |
Msa0143160 | AT4G34000.1 | 56.164 | 73 | 32 | 0 | 329 | 401 | 357 | 429 | 5.75e-18 | 86.3 |
Msa0143160 | AT4G34000.4 | 41.765 | 170 | 69 | 6 | 35 | 179 | 24 | 188 | 7.49e-25 | 106 |
Msa0143160 | AT4G34000.4 | 56.164 | 73 | 32 | 0 | 329 | 401 | 357 | 429 | 5.75e-18 | 86.3 |
Msa0143160 | AT4G34000.2 | 41.765 | 170 | 69 | 6 | 35 | 179 | 24 | 188 | 7.49e-25 | 106 |
Msa0143160 | AT4G34000.2 | 56.164 | 73 | 32 | 0 | 329 | 401 | 357 | 429 | 5.75e-18 | 86.3 |
Msa0143160 | AT3G19290.1 | 44.138 | 145 | 72 | 4 | 38 | 178 | 34 | 173 | 7.77e-25 | 106 |
Msa0143160 | AT3G19290.1 | 42.029 | 138 | 58 | 4 | 289 | 426 | 309 | 424 | 9.96e-18 | 85.5 |
Msa0143160 | AT3G19290.5 | 44.138 | 145 | 72 | 4 | 38 | 178 | 34 | 173 | 7.77e-25 | 106 |
Msa0143160 | AT3G19290.5 | 42.029 | 138 | 58 | 4 | 289 | 426 | 309 | 424 | 9.96e-18 | 85.5 |
Msa0143160 | AT3G19290.2 | 44.138 | 145 | 72 | 4 | 38 | 178 | 34 | 173 | 9.31e-25 | 106 |
Msa0143160 | AT2G41070.5 | 34.872 | 195 | 77 | 7 | 25 | 210 | 3 | 156 | 3.38e-20 | 90.1 |
Msa0143160 | AT2G41070.5 | 67.241 | 58 | 19 | 0 | 331 | 388 | 177 | 234 | 8.27e-16 | 77.4 |
Msa0143160 | AT2G41070.3 | 34.872 | 195 | 77 | 7 | 25 | 210 | 3 | 156 | 6.23e-20 | 89.7 |
Msa0143160 | AT2G41070.3 | 64.615 | 65 | 22 | 1 | 331 | 395 | 177 | 240 | 3.80e-16 | 78.6 |
Msa0143160 | AT2G41070.1 | 34.872 | 195 | 77 | 7 | 25 | 210 | 3 | 156 | 6.23e-20 | 89.7 |
Msa0143160 | AT2G41070.1 | 64.615 | 65 | 22 | 1 | 331 | 395 | 177 | 240 | 3.80e-16 | 78.6 |
Msa0143160 | AT2G41070.2 | 34.872 | 195 | 77 | 7 | 25 | 210 | 3 | 156 | 6.23e-20 | 89.7 |
Msa0143160 | AT2G41070.2 | 64.615 | 65 | 22 | 1 | 331 | 395 | 177 | 240 | 3.80e-16 | 78.6 |
Msa0143160 | AT2G41070.4 | 34.872 | 195 | 77 | 7 | 25 | 210 | 12 | 165 | 7.94e-20 | 89.4 |
Msa0143160 | AT2G41070.4 | 64.615 | 65 | 22 | 1 | 331 | 395 | 186 | 249 | 3.66e-16 | 79.0 |
Msa0143160 | AT1G45249.10 | 52.222 | 90 | 31 | 4 | 290 | 371 | 278 | 363 | 1.55e-14 | 75.5 |
Msa0143160 | AT1G45249.5 | 52.222 | 90 | 31 | 4 | 290 | 371 | 278 | 363 | 1.55e-14 | 75.5 |
Msa0143160 | AT2G17770.2 | 41.026 | 117 | 51 | 3 | 271 | 387 | 69 | 167 | 5.01e-14 | 70.9 |
Msa0143160 | AT1G45249.4 | 47.573 | 103 | 36 | 5 | 290 | 378 | 278 | 376 | 1.04e-13 | 73.2 |
Msa0143160 | AT1G45249.8 | 47.573 | 103 | 36 | 5 | 290 | 378 | 278 | 376 | 1.04e-13 | 73.2 |
Msa0143160 | AT1G45249.2 | 47.573 | 103 | 36 | 5 | 290 | 378 | 278 | 376 | 1.04e-13 | 73.2 |
Msa0143160 | AT1G45249.9 | 47.573 | 103 | 36 | 5 | 290 | 378 | 278 | 376 | 1.04e-13 | 73.2 |
Msa0143160 | AT5G44080.1 | 48.276 | 87 | 42 | 2 | 323 | 406 | 207 | 293 | 1.63e-13 | 71.6 |
Msa0143160 | AT4G35900.1 | 33.951 | 162 | 89 | 6 | 240 | 394 | 114 | 264 | 8.54e-12 | 66.2 |
Msa0143160 | AT1G03970.1 | 50.000 | 74 | 35 | 1 | 328 | 401 | 173 | 244 | 1.86e-11 | 64.7 |
Find 152 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAACTCGGGTGGTCAATT+TGG | 0.166727 | 1_4:+2097339 | Msa0143160:CDS |
ATGAGTTTCTAAGTAGTATT+TGG | 0.209852 | 1_4:+2096602 | Msa0143160:CDS |
CAGGAATCGATAACGAATTT+TGG | 0.216092 | 1_4:-2096732 | None:intergenic |
GTTGGAGAGCCTTCGGGTTC+GGG | 0.231478 | 1_4:+2097135 | Msa0143160:CDS |
CAGGCTGCTTCATTTGCTAT+TGG | 0.248337 | 1_4:+2097045 | Msa0143160:CDS |
GTGACAGCGGCAAGAATTTC+GGG | 0.248709 | 1_4:+2096566 | Msa0143160:CDS |
AGTTGGAGAGCCTTCGGGTT+CGG | 0.262820 | 1_4:+2097134 | Msa0143160:CDS |
GATGACATTGGAGGATTTCT+TGG | 0.268533 | 1_4:+2096882 | Msa0143160:CDS |
TGTGACAGCGGCAAGAATTT+CGG | 0.276728 | 1_4:+2096565 | Msa0143160:CDS |
TGGTTAAAGCAGGGGTAGTT+AGG | 0.281516 | 1_4:+2096902 | Msa0143160:CDS |
GCCATTGTAGAGTTGTTATT+AGG | 0.296465 | 1_4:-2097021 | None:intergenic |
CCGCCGCCAGCGGTTTGTTA+TGG | 0.308148 | 1_4:+2097210 | Msa0143160:CDS |
GTTGTTGCTGTTATTATTGT+TGG | 0.310662 | 1_4:-2096656 | None:intergenic |
TGTGGCAGTGGCACAAACTA+TGG | 0.315000 | 1_4:+2097269 | Msa0143160:CDS |
ACCCCTCGACAACCGACTTT+TGG | 0.322363 | 1_4:+2096856 | Msa0143160:CDS |
ACCTGTTAGTCCGGTTTCTT+CGG | 0.327709 | 1_4:+2097302 | Msa0143160:CDS |
AATGGAGGAGCGGGCGGTTA+TGG | 0.333736 | 1_4:+2097246 | Msa0143160:CDS |
AAAACTCGGGTGGTCAATTT+GGG | 0.341515 | 1_4:+2097340 | Msa0143160:CDS |
ACACTGCGGCGTAATGCTGC+TGG | 0.344613 | 1_4:-2096996 | None:intergenic |
TTACCTCATGCAGTGTTTAG+AGG | 0.347444 | 1_4:+2098070 | Msa0143160:intron |
GGAAAACTGTTGAACAAGTT+TGG | 0.348644 | 1_4:+2096767 | Msa0143160:CDS |
TTTGCTATTGGCGGCGGCGG+TGG | 0.358934 | 1_4:+2097057 | Msa0143160:CDS |
CTCTCCACCACCCTTTCAAC+AGG | 0.360473 | 1_4:-2097408 | None:intergenic |
CACTGCGGCGTAATGCTGCT+GGG | 0.364765 | 1_4:-2096995 | None:intergenic |
TGGAGGAGTTGGAGAGCCTT+CGG | 0.365531 | 1_4:+2097128 | Msa0143160:CDS |
TCCGAAGAAACCGGACTAAC+AGG | 0.372237 | 1_4:-2097303 | None:intergenic |
ATTATAGTTTAGACCATCAT+TGG | 0.373341 | 1_4:-2097962 | None:intergenic |
GTCGAGGGTGAGTGAATATA+TGG | 0.374227 | 1_4:-2096524 | None:intergenic |
GGTGGTGGTGCTATGGCAAC+TGG | 0.375213 | 1_4:-2096943 | None:intergenic |
CTTCGGGTTCGGGGTATGTT+GGG | 0.383128 | 1_4:+2097145 | Msa0143160:CDS |
CAAACCGCTGGCGGCGGCGG+AGG | 0.394088 | 1_4:-2097204 | None:intergenic |
ACTGCTGCTGCGGCAGGTGG+TGG | 0.397437 | 1_4:-2096958 | None:intergenic |
TAGAAACTCATCCATGTTCA+TGG | 0.401819 | 1_4:-2096590 | None:intergenic |
AGAGAATTCTCAACTGAAAC+AGG | 0.410221 | 1_4:+2097803 | Msa0143160:CDS |
TAAGAGAAGGTGAGATGAAT+TGG | 0.412357 | 1_4:+2096401 | Msa0143160:CDS |
TTGCTATTGGCGGCGGCGGT+GGG | 0.413081 | 1_4:+2097058 | Msa0143160:CDS |
CCGGTTTCTTCGGATGGGAT+TGG | 0.415620 | 1_4:+2097312 | Msa0143160:CDS |
GGAGGAGTTGGAGAGCCTTC+GGG | 0.416356 | 1_4:+2097129 | Msa0143160:CDS |
CCTTCGGGTTCGGGGTATGT+TGG | 0.416821 | 1_4:+2097144 | Msa0143160:CDS |
CACCTCCCTGTGCCACCGTT+TGG | 0.419295 | 1_4:-2097107 | None:intergenic |
AAGATCTAGAGCCAGAAAAC+AGG | 0.420885 | 1_4:+2097470 | Msa0143160:CDS |
TGTTGGATGCAGCTTGTTGT+TGG | 0.421539 | 1_4:-2096639 | None:intergenic |
CGGCGTAATGCTGCTGGGGC+CGG | 0.426351 | 1_4:-2096990 | None:intergenic |
GCACAGGGAGGTGGAGGAGT+TGG | 0.427569 | 1_4:+2097117 | Msa0143160:CDS |
GTTAGTCCGGTTTCTTCGGA+TGG | 0.429323 | 1_4:+2097306 | Msa0143160:CDS |
CCCTGTGCCACCGTTTGGTA+TGG | 0.438711 | 1_4:-2097102 | None:intergenic |
GATGGGCGGACCTGTTAGTC+CGG | 0.445248 | 1_4:+2097293 | Msa0143160:CDS |
TCAGAAAGGGATTAGCAAAC+AGG | 0.447868 | 1_4:+2096696 | Msa0143160:CDS |
ATTGATATGAATGGTTTAAG+AGG | 0.448244 | 1_4:+2097363 | Msa0143160:CDS |
GGAAGAAAGAGGATGGTTGA+TGG | 0.453215 | 1_4:+2097384 | Msa0143160:CDS |
GAGGATTTCTTGGTTAAAGC+AGG | 0.456229 | 1_4:+2096892 | Msa0143160:CDS |
GATGACACTGCTGCTGCGGC+AGG | 0.456822 | 1_4:-2096964 | None:intergenic |
TGGTGGAGAGAAGGCAGAGG+AGG | 0.457363 | 1_4:+2097421 | Msa0143160:CDS |
GACTAGGGATAGTATAGGTA+CGG | 0.462211 | 1_4:+2097176 | Msa0143160:CDS |
AATGTCATTTCTTCATCGCT+TGG | 0.465109 | 1_4:+2096487 | Msa0143160:CDS |
TCATTTGCTATTGGCGGCGG+CGG | 0.466577 | 1_4:+2097054 | Msa0143160:CDS |
GCCATACCAAACGGTGGCAC+AGG | 0.467096 | 1_4:+2097101 | Msa0143160:CDS |
ACGGTGGCACAGGGAGGTGG+AGG | 0.470179 | 1_4:+2097111 | Msa0143160:CDS |
GGGAAGGAGAAGAAGCGATC+AGG | 0.473369 | 1_4:+2096452 | Msa0143160:CDS |
TAACAAACCGCTGGCGGCGG+CGG | 0.477710 | 1_4:-2097207 | None:intergenic |
CCGCCAGCGGTTTGTTATGG+AGG | 0.477954 | 1_4:+2097213 | Msa0143160:CDS |
CAAACGGTGGCACAGGGAGG+TGG | 0.478151 | 1_4:+2097108 | Msa0143160:CDS |
CGATTCCTGCACCTCTCTGC+AGG | 0.479043 | 1_4:+2096746 | Msa0143160:CDS |
GGTTGATGGTCCTGTTGAAA+GGG | 0.481262 | 1_4:+2097398 | Msa0143160:CDS |
CCAATCCCATCCGAAGAAAC+CGG | 0.481309 | 1_4:-2097312 | None:intergenic |
GGTTAAAGCAGGGGTAGTTA+GGG | 0.481908 | 1_4:+2096903 | Msa0143160:CDS |
AGAGAGGAGAAGAAGACAAC+AGG | 0.484243 | 1_4:+2097936 | Msa0143160:CDS |
TTAGTCCGGTTTCTTCGGAT+GGG | 0.486374 | 1_4:+2097307 | Msa0143160:CDS |
GACACTGCTGCTGCGGCAGG+TGG | 0.491945 | 1_4:-2096961 | None:intergenic |
GCTGCTTCATTTGCTATTGG+CGG | 0.495000 | 1_4:+2097048 | Msa0143160:CDS |
AGTGGCACAAACTATGGGGA+TGG | 0.502987 | 1_4:+2097275 | Msa0143160:CDS |
GGGCGGTTATGGTGTGGCAG+TGG | 0.504333 | 1_4:+2097257 | Msa0143160:CDS |
CAATTTGGGATTGATATGAA+TGG | 0.505237 | 1_4:+2097354 | Msa0143160:CDS |
TGCGGCAGGTGGTGGTGCTA+TGG | 0.506524 | 1_4:-2096950 | None:intergenic |
GGGTGGTGGAGAGAAGGCAG+AGG | 0.506953 | 1_4:+2097418 | Msa0143160:CDS |
AGAGTGGTGAATGGAGGAGC+GGG | 0.507484 | 1_4:+2097237 | Msa0143160:CDS |
CCATAACAAACCGCTGGCGG+CGG | 0.510979 | 1_4:-2097210 | None:intergenic |
AGACAACAGGTAACCAATGA+TGG | 0.512321 | 1_4:+2097949 | Msa0143160:CDS |
ACTTGTCTGCAGCTCAGAAA+GGG | 0.519532 | 1_4:+2096683 | Msa0143160:CDS |
GTGGCAGTGGCACAAACTAT+GGG | 0.520968 | 1_4:+2097270 | Msa0143160:CDS |
AACTTGTCTGCAGCTCAGAA+AGG | 0.521964 | 1_4:+2096682 | Msa0143160:CDS |
CGCCAAAAGTCGGTTGTCGA+GGG | 0.522444 | 1_4:-2096858 | None:intergenic |
AAGAATATGGTGGTAAGAGA+AGG | 0.522714 | 1_4:+2096388 | None:intergenic |
GCTTCATTTGCTATTGGCGG+CGG | 0.528163 | 1_4:+2097051 | Msa0143160:CDS |
CAACATTGTTGATGTTGTGA+TGG | 0.528803 | 1_4:-2096816 | None:intergenic |
TATGGAGGGAGAGTGGTGAA+TGG | 0.528806 | 1_4:+2097228 | Msa0143160:CDS |
CGCCAGCGGTTTGTTATGGA+GGG | 0.528969 | 1_4:+2097214 | Msa0143160:CDS |
ACTAGGGATAGTATAGGTAC+GGG | 0.531284 | 1_4:+2097177 | Msa0143160:CDS |
AGAAACTGAGAGGCTTAAGA+AGG | 0.532363 | 1_4:+2098135 | Msa0143160:CDS |
TAACAACTCTACAATGGCTC+AGG | 0.534100 | 1_4:+2097026 | Msa0143160:CDS |
TGTTGGGAATGGTAAGACTA+GGG | 0.535160 | 1_4:+2097161 | Msa0143160:CDS |
GGAGGGAGAGTGGTGAATGG+AGG | 0.540052 | 1_4:+2097231 | Msa0143160:CDS |
GAATTTCGGGTCCATGAACA+TGG | 0.544850 | 1_4:+2096579 | Msa0143160:CDS |
TTTAAGAGGAAGAAAGAGGA+TGG | 0.548041 | 1_4:+2097377 | Msa0143160:CDS |
CGCTGTCACAGAGGCTGTGT+TGG | 0.549331 | 1_4:-2096552 | None:intergenic |
TCGCCAAAAGTCGGTTGTCG+AGG | 0.549884 | 1_4:-2096859 | None:intergenic |
TTGAAAGGGTGGTGGAGAGA+AGG | 0.555209 | 1_4:+2097412 | Msa0143160:CDS |
GTGGCACAAACTATGGGGAT+GGG | 0.557884 | 1_4:+2097276 | Msa0143160:CDS |
CTCCCTCCATAACAAACCGC+TGG | 0.558325 | 1_4:-2097216 | None:intergenic |
GTAGTTAGGGAACAACAGTC+TGG | 0.560019 | 1_4:+2096916 | Msa0143160:CDS |
TTCTCAACTGAAACAGGCAC+TGG | 0.564684 | 1_4:+2097809 | Msa0143160:CDS |
TGGTTGATGGTCCTGTTGAA+AGG | 0.565970 | 1_4:+2097397 | Msa0143160:CDS |
GGCTGTGTTGGAACTCGTCG+AGG | 0.566650 | 1_4:-2096540 | None:intergenic |
GGTTCGGGGTATGTTGGGAA+TGG | 0.567692 | 1_4:+2097150 | Msa0143160:CDS |
CAGCAGCAGTGTCATCTCAC+CGG | 0.569711 | 1_4:+2096971 | Msa0143160:CDS |
ATGGTTTAAGAGGAAGAAAG+AGG | 0.570839 | 1_4:+2097373 | Msa0143160:CDS |
TTGGAGAGCCTTCGGGTTCG+GGG | 0.572733 | 1_4:+2097136 | Msa0143160:CDS |
TGTGCCACCGTTTGGTATGG+CGG | 0.573089 | 1_4:-2097099 | None:intergenic |
AGGATTTCTTGGTTAAAGCA+GGG | 0.574066 | 1_4:+2096893 | Msa0143160:CDS |
TGATGGTCCTGTTGAAAGGG+TGG | 0.574869 | 1_4:+2097401 | Msa0143160:CDS |
TTCTTCAGGCTGAACTAGAG+AGG | 0.575021 | 1_4:+2097920 | Msa0143160:intron |
GGTAAGACTAGGGATAGTAT+AGG | 0.577774 | 1_4:+2097171 | Msa0143160:CDS |
ACTGCGGCGTAATGCTGCTG+GGG | 0.580500 | 1_4:-2096994 | None:intergenic |
AGGAGCGGGCGGTTATGGTG+TGG | 0.583622 | 1_4:+2097251 | Msa0143160:CDS |
GTGAGATGAATTGGCAACAA+GGG | 0.583790 | 1_4:+2096410 | Msa0143160:CDS |
CCATACCAAACGGTGGCACA+GGG | 0.583912 | 1_4:+2097102 | Msa0143160:CDS |
TGGGATTGGAAACGAAAACT+CGG | 0.584083 | 1_4:+2097326 | Msa0143160:CDS |
GTAGAATCATTGCAGAGGGA+AGG | 0.584321 | 1_4:+2096436 | Msa0143160:CDS |
CGGCGGTGGGAATCTGAATG+TGG | 0.590238 | 1_4:+2097071 | Msa0143160:CDS |
ATGTTGGGAATGGTAAGACT+AGG | 0.593588 | 1_4:+2097160 | Msa0143160:CDS |
GGTTGCGCCGCCATACCAAA+CGG | 0.595175 | 1_4:+2097092 | Msa0143160:CDS |
GTATCCTCCGCCGCCGCCAG+CGG | 0.598153 | 1_4:+2097200 | Msa0143160:CDS |
CAACACAGCCTCTGTGACAG+CGG | 0.601697 | 1_4:+2096553 | Msa0143160:CDS |
AATGTCATCTCGCCAAAAGT+CGG | 0.605885 | 1_4:-2096868 | None:intergenic |
GTGAGATGACACTGCTGCTG+CGG | 0.608010 | 1_4:-2096968 | None:intergenic |
TGGTCCTGTTGAAAGGGTGG+TGG | 0.612440 | 1_4:+2097404 | Msa0143160:CDS |
GGAGGTAGAATCATTGCAGA+GGG | 0.612581 | 1_4:+2096432 | Msa0143160:CDS |
GGTGAGATGAATTGGCAACA+AGG | 0.616844 | 1_4:+2096409 | Msa0143160:CDS |
CGGTTGTCGAGGGGTAGACT+CGG | 0.617759 | 1_4:-2096848 | None:intergenic |
GAGAGTGGTGAATGGAGGAG+CGG | 0.626383 | 1_4:+2097236 | Msa0143160:CDS |
TCCTAATAACAACTCTACAA+TGG | 0.627967 | 1_4:+2097020 | Msa0143160:CDS |
GCACAAACTATGGGGATGGG+CGG | 0.628434 | 1_4:+2097279 | Msa0143160:CDS |
GGTTTGTTATGGAGGGAGAG+TGG | 0.634679 | 1_4:+2097221 | Msa0143160:CDS |
GATGAATTGGCAACAAGGGG+AGG | 0.635893 | 1_4:+2096414 | Msa0143160:CDS |
TGAGATGAATTGGCAACAAG+GGG | 0.639163 | 1_4:+2096411 | Msa0143160:CDS |
CCTCCATAACAAACCGCTGG+CGG | 0.640926 | 1_4:-2097213 | None:intergenic |
GGATTTCTTGGTTAAAGCAG+GGG | 0.646725 | 1_4:+2096894 | Msa0143160:CDS |
CCAACATACCCCGAACCCGA+AGG | 0.649040 | 1_4:-2097144 | None:intergenic |
GCCAAAAGTCGGTTGTCGAG+GGG | 0.657167 | 1_4:-2096857 | None:intergenic |
GCTGTGTTGGAACTCGTCGA+GGG | 0.657810 | 1_4:-2096539 | None:intergenic |
GGGATTGGAAACGAAAACTC+GGG | 0.662976 | 1_4:+2097327 | Msa0143160:CDS |
GTGGTGAATGGAGGAGCGGG+CGG | 0.672029 | 1_4:+2097240 | Msa0143160:CDS |
GGGAGGTAGAATCATTGCAG+AGG | 0.672753 | 1_4:+2096431 | Msa0143160:CDS |
TACCAAACGGTGGCACAGGG+AGG | 0.683725 | 1_4:+2097105 | Msa0143160:CDS |
TGCGCCGCCATACCAAACGG+TGG | 0.683832 | 1_4:+2097095 | Msa0143160:CDS |
TGGCAGTGGCACAAACTATG+GGG | 0.694881 | 1_4:+2097271 | Msa0143160:CDS |
ATTGGAAACGAAAACTCGGG+TGG | 0.712637 | 1_4:+2097330 | Msa0143160:CDS |
TATGTGAAGAAAACATCACA+TGG | 0.715611 | 1_4:+2098172 | Msa0143160:CDS |
AAAGCAAAAGAGAAACTGAG+AGG | 0.716117 | 1_4:+2098125 | Msa0143160:CDS |
AATTCTTGCCGCTGTCACAG+AGG | 0.718674 | 1_4:-2096561 | None:intergenic |
CTAGGGATAGTATAGGTACG+GGG | 0.720083 | 1_4:+2097178 | Msa0143160:CDS |
GTTGTTATTAGGATACACTG+CGG | 0.806201 | 1_4:-2097010 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATTAAAGTATAAAATAAT+TGG | - | chr1_4:2097511-2097530 | None:intergenic | 10.0% |
!! | TTATATTTATATACTATTGA+AGG | + | chr1_4:2097583-2097602 | Msa0143160:intron | 10.0% |
!! | AGATTAAAGTATAAAATAAT+TGG | - | chr1_4:2097511-2097530 | None:intergenic | 10.0% |
!! | TTATATTTATATACTATTGA+AGG | + | chr1_4:2097583-2097602 | Msa0143160:intron | 10.0% |
!! | AAATAATTGGTTAAAATTTC+AGG | - | chr1_4:2097498-2097517 | None:intergenic | 15.0% |
!!! | CAAACATATTATTTCTAATT+TGG | - | chr1_4:2097665-2097684 | None:intergenic | 15.0% |
!! | AAATAATTGGTTAAAATTTC+AGG | - | chr1_4:2097498-2097517 | None:intergenic | 15.0% |
!!! | CAAACATATTATTTCTAATT+TGG | - | chr1_4:2097665-2097684 | None:intergenic | 15.0% |
!! | TATATATACATGAGAATTTG+TGG | - | chr1_4:2097546-2097565 | None:intergenic | 20.0% |
!!! | TAATGTCTTTAAATTTTCTG+TGG | - | chr1_4:2097991-2098010 | None:intergenic | 20.0% |
!!! | TCCTTTTATTTTGAATCAAA+TGG | + | chr1_4:2098015-2098034 | Msa0143160:intron | 20.0% |
!! | TCCATTTGATTCAAAATAAA+AGG | - | chr1_4:2098019-2098038 | None:intergenic | 20.0% |
!! | TATATATACATGAGAATTTG+TGG | - | chr1_4:2097546-2097565 | None:intergenic | 20.0% |
!!! | TAATGTCTTTAAATTTTCTG+TGG | - | chr1_4:2097991-2098010 | None:intergenic | 20.0% |
!!! | TCCTTTTATTTTGAATCAAA+TGG | + | chr1_4:2098015-2098034 | Msa0143160:intron | 20.0% |
!! | TCCATTTGATTCAAAATAAA+AGG | - | chr1_4:2098019-2098038 | None:intergenic | 20.0% |
! | ATGAGTTTCTAAGTAGTATT+TGG | + | chr1_4:2096602-2096621 | Msa0143160:CDS | 25.0% |
! | ATTGATATGAATGGTTTAAG+AGG | + | chr1_4:2097363-2097382 | Msa0143160:CDS | 25.0% |
!! | GACATTAGTTTAAGAAGAAT+TGG | + | chr1_4:2097607-2097626 | Msa0143160:intron | 25.0% |
! | GAAAGAAAATTGTGTTACAA+AGG | - | chr1_4:2097727-2097746 | None:intergenic | 25.0% |
! | ATTATAGTTTAGACCATCAT+TGG | - | chr1_4:2097965-2097984 | None:intergenic | 25.0% |
! | ATGAGTTTCTAAGTAGTATT+TGG | + | chr1_4:2096602-2096621 | Msa0143160:CDS | 25.0% |
! | ATTGATATGAATGGTTTAAG+AGG | + | chr1_4:2097363-2097382 | Msa0143160:CDS | 25.0% |
!! | GACATTAGTTTAAGAAGAAT+TGG | + | chr1_4:2097607-2097626 | Msa0143160:intron | 25.0% |
! | GAAAGAAAATTGTGTTACAA+AGG | - | chr1_4:2097727-2097746 | None:intergenic | 25.0% |
! | ATTATAGTTTAGACCATCAT+TGG | - | chr1_4:2097965-2097984 | None:intergenic | 25.0% |
! | GTTGTTGCTGTTATTATTGT+TGG | - | chr1_4:2096659-2096678 | None:intergenic | 30.0% |
TCCTAATAACAACTCTACAA+TGG | + | chr1_4:2097020-2097039 | Msa0143160:CDS | 30.0% | |
! | CAATTTGGGATTGATATGAA+TGG | + | chr1_4:2097354-2097373 | Msa0143160:CDS | 30.0% |
! | ATTTTCTTTCTTGCTTATGC+AGG | + | chr1_4:2097737-2097756 | Msa0143160:intron | 30.0% |
CTGTAATAGTTAACGTTGTT+TGG | - | chr1_4:2097840-2097859 | None:intergenic | 30.0% | |
! | TCATGCTTCTTTTATTCTTC+AGG | + | chr1_4:2097906-2097925 | Msa0143160:intron | 30.0% |
TATGTGAAGAAAACATCACA+TGG | + | chr1_4:2098172-2098191 | Msa0143160:CDS | 30.0% | |
! | GTTGTTGCTGTTATTATTGT+TGG | - | chr1_4:2096659-2096678 | None:intergenic | 30.0% |
TCCTAATAACAACTCTACAA+TGG | + | chr1_4:2097020-2097039 | Msa0143160:CDS | 30.0% | |
! | CAATTTGGGATTGATATGAA+TGG | + | chr1_4:2097354-2097373 | Msa0143160:CDS | 30.0% |
! | ATTTTCTTTCTTGCTTATGC+AGG | + | chr1_4:2097737-2097756 | Msa0143160:intron | 30.0% |
CTGTAATAGTTAACGTTGTT+TGG | - | chr1_4:2097840-2097859 | None:intergenic | 30.0% | |
! | TCATGCTTCTTTTATTCTTC+AGG | + | chr1_4:2097906-2097925 | Msa0143160:intron | 30.0% |
TATGTGAAGAAAACATCACA+TGG | + | chr1_4:2098172-2098191 | Msa0143160:CDS | 30.0% | |
TAAGAGAAGGTGAGATGAAT+TGG | + | chr1_4:2096401-2096420 | Msa0143160:CDS | 35.0% | |
! | AATGTCATTTCTTCATCGCT+TGG | + | chr1_4:2096487-2096506 | Msa0143160:CDS | 35.0% |
TAGAAACTCATCCATGTTCA+TGG | - | chr1_4:2096593-2096612 | None:intergenic | 35.0% | |
! | CAGGAATCGATAACGAATTT+TGG | - | chr1_4:2096735-2096754 | None:intergenic | 35.0% |
GGAAAACTGTTGAACAAGTT+TGG | + | chr1_4:2096767-2096786 | Msa0143160:CDS | 35.0% | |
CAACATTGTTGATGTTGTGA+TGG | - | chr1_4:2096819-2096838 | None:intergenic | 35.0% | |
AGGATTTCTTGGTTAAAGCA+GGG | + | chr1_4:2096893-2096912 | Msa0143160:CDS | 35.0% | |
! | GTTGTTATTAGGATACACTG+CGG | - | chr1_4:2097013-2097032 | None:intergenic | 35.0% |
! | GCCATTGTAGAGTTGTTATT+AGG | - | chr1_4:2097024-2097043 | None:intergenic | 35.0% |
ATGGTTTAAGAGGAAGAAAG+AGG | + | chr1_4:2097373-2097392 | Msa0143160:CDS | 35.0% | |
TTTAAGAGGAAGAAAGAGGA+TGG | + | chr1_4:2097377-2097396 | Msa0143160:CDS | 35.0% | |
! | AATTTCAGGAACCTGTTTTC+TGG | - | chr1_4:2097484-2097503 | None:intergenic | 35.0% |
AGAGAATTCTCAACTGAAAC+AGG | + | chr1_4:2097803-2097822 | Msa0143160:CDS | 35.0% | |
GTGATTCAACTATACTGACA+AGG | + | chr1_4:2097882-2097901 | Msa0143160:intron | 35.0% | |
AAAGCAAAAGAGAAACTGAG+AGG | + | chr1_4:2098125-2098144 | Msa0143160:CDS | 35.0% | |
TAAGAGAAGGTGAGATGAAT+TGG | + | chr1_4:2096401-2096420 | Msa0143160:CDS | 35.0% | |
! | AATGTCATTTCTTCATCGCT+TGG | + | chr1_4:2096487-2096506 | Msa0143160:CDS | 35.0% |
TAGAAACTCATCCATGTTCA+TGG | - | chr1_4:2096593-2096612 | None:intergenic | 35.0% | |
! | CAGGAATCGATAACGAATTT+TGG | - | chr1_4:2096735-2096754 | None:intergenic | 35.0% |
GGAAAACTGTTGAACAAGTT+TGG | + | chr1_4:2096767-2096786 | Msa0143160:CDS | 35.0% | |
CAACATTGTTGATGTTGTGA+TGG | - | chr1_4:2096819-2096838 | None:intergenic | 35.0% | |
AGGATTTCTTGGTTAAAGCA+GGG | + | chr1_4:2096893-2096912 | Msa0143160:CDS | 35.0% | |
! | GTTGTTATTAGGATACACTG+CGG | - | chr1_4:2097013-2097032 | None:intergenic | 35.0% |
! | GCCATTGTAGAGTTGTTATT+AGG | - | chr1_4:2097024-2097043 | None:intergenic | 35.0% |
ATGGTTTAAGAGGAAGAAAG+AGG | + | chr1_4:2097373-2097392 | Msa0143160:CDS | 35.0% | |
TTTAAGAGGAAGAAAGAGGA+TGG | + | chr1_4:2097377-2097396 | Msa0143160:CDS | 35.0% | |
! | AATTTCAGGAACCTGTTTTC+TGG | - | chr1_4:2097484-2097503 | None:intergenic | 35.0% |
AGAGAATTCTCAACTGAAAC+AGG | + | chr1_4:2097803-2097822 | Msa0143160:CDS | 35.0% | |
GTGATTCAACTATACTGACA+AGG | + | chr1_4:2097882-2097901 | Msa0143160:intron | 35.0% | |
AAAGCAAAAGAGAAACTGAG+AGG | + | chr1_4:2098125-2098144 | Msa0143160:CDS | 35.0% | |
GTGAGATGAATTGGCAACAA+GGG | + | chr1_4:2096410-2096429 | Msa0143160:CDS | 40.0% | |
TGAGATGAATTGGCAACAAG+GGG | + | chr1_4:2096411-2096430 | Msa0143160:CDS | 40.0% | |
! | TCAGAAAGGGATTAGCAAAC+AGG | + | chr1_4:2096696-2096715 | Msa0143160:CDS | 40.0% |
!! | ATCGATAACGAATTTTGGCG+AGG | - | chr1_4:2096730-2096749 | None:intergenic | 40.0% |
AATGTCATCTCGCCAAAAGT+CGG | - | chr1_4:2096871-2096890 | None:intergenic | 40.0% | |
GATGACATTGGAGGATTTCT+TGG | + | chr1_4:2096882-2096901 | Msa0143160:CDS | 40.0% | |
GAGGATTTCTTGGTTAAAGC+AGG | + | chr1_4:2096892-2096911 | Msa0143160:CDS | 40.0% | |
GGATTTCTTGGTTAAAGCAG+GGG | + | chr1_4:2096894-2096913 | Msa0143160:CDS | 40.0% | |
TAACAACTCTACAATGGCTC+AGG | + | chr1_4:2097026-2097045 | Msa0143160:CDS | 40.0% | |
ATGTTGGGAATGGTAAGACT+AGG | + | chr1_4:2097160-2097179 | Msa0143160:CDS | 40.0% | |
TGTTGGGAATGGTAAGACTA+GGG | + | chr1_4:2097161-2097180 | Msa0143160:CDS | 40.0% | |
GGTAAGACTAGGGATAGTAT+AGG | + | chr1_4:2097171-2097190 | Msa0143160:CDS | 40.0% | |
GACTAGGGATAGTATAGGTA+CGG | + | chr1_4:2097176-2097195 | Msa0143160:CDS | 40.0% | |
ACTAGGGATAGTATAGGTAC+GGG | + | chr1_4:2097177-2097196 | Msa0143160:CDS | 40.0% | |
TGGGATTGGAAACGAAAACT+CGG | + | chr1_4:2097326-2097345 | Msa0143160:CDS | 40.0% | |
AAAACTCGGGTGGTCAATTT+GGG | + | chr1_4:2097340-2097359 | Msa0143160:CDS | 40.0% | |
! | AAGATCTAGAGCCAGAAAAC+AGG | + | chr1_4:2097470-2097489 | Msa0143160:CDS | 40.0% |
AGACAACAGGTAACCAATGA+TGG | + | chr1_4:2097949-2097968 | Msa0143160:CDS | 40.0% | |
TTACCTCATGCAGTGTTTAG+AGG | + | chr1_4:2098070-2098089 | Msa0143160:intron | 40.0% | |
TTTCCTCTAAACACTGCATG+AGG | - | chr1_4:2098076-2098095 | None:intergenic | 40.0% | |
! | CTCTTTTGCTTTCTGAGCTT+TGG | - | chr1_4:2098117-2098136 | None:intergenic | 40.0% |
AGAAACTGAGAGGCTTAAGA+AGG | + | chr1_4:2098135-2098154 | Msa0143160:CDS | 40.0% | |
GTGAGATGAATTGGCAACAA+GGG | + | chr1_4:2096410-2096429 | Msa0143160:CDS | 40.0% | |
TGAGATGAATTGGCAACAAG+GGG | + | chr1_4:2096411-2096430 | Msa0143160:CDS | 40.0% | |
! | TCAGAAAGGGATTAGCAAAC+AGG | + | chr1_4:2096696-2096715 | Msa0143160:CDS | 40.0% |
!! | ATCGATAACGAATTTTGGCG+AGG | - | chr1_4:2096730-2096749 | None:intergenic | 40.0% |
AATGTCATCTCGCCAAAAGT+CGG | - | chr1_4:2096871-2096890 | None:intergenic | 40.0% | |
GATGACATTGGAGGATTTCT+TGG | + | chr1_4:2096882-2096901 | Msa0143160:CDS | 40.0% | |
GAGGATTTCTTGGTTAAAGC+AGG | + | chr1_4:2096892-2096911 | Msa0143160:CDS | 40.0% | |
GGATTTCTTGGTTAAAGCAG+GGG | + | chr1_4:2096894-2096913 | Msa0143160:CDS | 40.0% | |
TAACAACTCTACAATGGCTC+AGG | + | chr1_4:2097026-2097045 | Msa0143160:CDS | 40.0% | |
ATGTTGGGAATGGTAAGACT+AGG | + | chr1_4:2097160-2097179 | Msa0143160:CDS | 40.0% | |
TGTTGGGAATGGTAAGACTA+GGG | + | chr1_4:2097161-2097180 | Msa0143160:CDS | 40.0% | |
GGTAAGACTAGGGATAGTAT+AGG | + | chr1_4:2097171-2097190 | Msa0143160:CDS | 40.0% | |
GACTAGGGATAGTATAGGTA+CGG | + | chr1_4:2097176-2097195 | Msa0143160:CDS | 40.0% | |
ACTAGGGATAGTATAGGTAC+GGG | + | chr1_4:2097177-2097196 | Msa0143160:CDS | 40.0% | |
TGGGATTGGAAACGAAAACT+CGG | + | chr1_4:2097326-2097345 | Msa0143160:CDS | 40.0% | |
AAAACTCGGGTGGTCAATTT+GGG | + | chr1_4:2097340-2097359 | Msa0143160:CDS | 40.0% | |
! | AAGATCTAGAGCCAGAAAAC+AGG | + | chr1_4:2097470-2097489 | Msa0143160:CDS | 40.0% |
AGACAACAGGTAACCAATGA+TGG | + | chr1_4:2097949-2097968 | Msa0143160:CDS | 40.0% | |
TTACCTCATGCAGTGTTTAG+AGG | + | chr1_4:2098070-2098089 | Msa0143160:intron | 40.0% | |
TTTCCTCTAAACACTGCATG+AGG | - | chr1_4:2098076-2098095 | None:intergenic | 40.0% | |
! | CTCTTTTGCTTTCTGAGCTT+TGG | - | chr1_4:2098117-2098136 | None:intergenic | 40.0% |
AGAAACTGAGAGGCTTAAGA+AGG | + | chr1_4:2098135-2098154 | Msa0143160:CDS | 40.0% | |
GGTGAGATGAATTGGCAACA+AGG | + | chr1_4:2096409-2096428 | Msa0143160:CDS | 45.0% | |
GGAGGTAGAATCATTGCAGA+GGG | + | chr1_4:2096432-2096451 | Msa0143160:CDS | 45.0% | |
GTAGAATCATTGCAGAGGGA+AGG | + | chr1_4:2096436-2096455 | Msa0143160:CDS | 45.0% | |
GTCGAGGGTGAGTGAATATA+TGG | - | chr1_4:2096527-2096546 | None:intergenic | 45.0% | |
TGTGACAGCGGCAAGAATTT+CGG | + | chr1_4:2096565-2096584 | Msa0143160:CDS | 45.0% | |
! | GAATTTCGGGTCCATGAACA+TGG | + | chr1_4:2096579-2096598 | Msa0143160:CDS | 45.0% |
!! | TGTTGGATGCAGCTTGTTGT+TGG | - | chr1_4:2096642-2096661 | None:intergenic | 45.0% |
AACTTGTCTGCAGCTCAGAA+AGG | + | chr1_4:2096682-2096701 | Msa0143160:CDS | 45.0% | |
ACTTGTCTGCAGCTCAGAAA+GGG | + | chr1_4:2096683-2096702 | Msa0143160:CDS | 45.0% | |
! | TCAACAGTTTTCCTGCAGAG+AGG | - | chr1_4:2096760-2096779 | None:intergenic | 45.0% |
! | GACTTTTGGCGAGATGACAT+TGG | + | chr1_4:2096870-2096889 | Msa0143160:CDS | 45.0% |
! | TTTTGGCGAGATGACATTGG+AGG | + | chr1_4:2096873-2096892 | Msa0143160:CDS | 45.0% |
TGGTTAAAGCAGGGGTAGTT+AGG | + | chr1_4:2096902-2096921 | Msa0143160:CDS | 45.0% | |
GGTTAAAGCAGGGGTAGTTA+GGG | + | chr1_4:2096903-2096922 | Msa0143160:CDS | 45.0% | |
GTAGTTAGGGAACAACAGTC+TGG | + | chr1_4:2096916-2096935 | Msa0143160:CDS | 45.0% | |
!! | CAGGCTGCTTCATTTGCTAT+TGG | + | chr1_4:2097045-2097064 | Msa0143160:CDS | 45.0% |
!! | GCTGCTTCATTTGCTATTGG+CGG | + | chr1_4:2097048-2097067 | Msa0143160:CDS | 45.0% |
CTAGGGATAGTATAGGTACG+GGG | + | chr1_4:2097178-2097197 | Msa0143160:CDS | 45.0% | |
ACCTGTTAGTCCGGTTTCTT+CGG | + | chr1_4:2097302-2097321 | Msa0143160:CDS | 45.0% | |
TTAGTCCGGTTTCTTCGGAT+GGG | + | chr1_4:2097307-2097326 | Msa0143160:CDS | 45.0% | |
GGGATTGGAAACGAAAACTC+GGG | + | chr1_4:2097327-2097346 | Msa0143160:CDS | 45.0% | |
ATTGGAAACGAAAACTCGGG+TGG | + | chr1_4:2097330-2097349 | Msa0143160:CDS | 45.0% | |
GAAAACTCGGGTGGTCAATT+TGG | + | chr1_4:2097339-2097358 | Msa0143160:CDS | 45.0% | |
GGAAGAAAGAGGATGGTTGA+TGG | + | chr1_4:2097384-2097403 | Msa0143160:CDS | 45.0% | |
!! | TGGTTGATGGTCCTGTTGAA+AGG | + | chr1_4:2097397-2097416 | Msa0143160:CDS | 45.0% |
!! | GGTTGATGGTCCTGTTGAAA+GGG | + | chr1_4:2097398-2097417 | Msa0143160:CDS | 45.0% |
TTCTCAACTGAAACAGGCAC+TGG | + | chr1_4:2097809-2097828 | Msa0143160:CDS | 45.0% | |
TTCTTCAGGCTGAACTAGAG+AGG | + | chr1_4:2097920-2097939 | Msa0143160:intron | 45.0% | |
AGAGAGGAGAAGAAGACAAC+AGG | + | chr1_4:2097936-2097955 | Msa0143160:CDS | 45.0% | |
GGTGAGATGAATTGGCAACA+AGG | + | chr1_4:2096409-2096428 | Msa0143160:CDS | 45.0% | |
GGAGGTAGAATCATTGCAGA+GGG | + | chr1_4:2096432-2096451 | Msa0143160:CDS | 45.0% | |
GTAGAATCATTGCAGAGGGA+AGG | + | chr1_4:2096436-2096455 | Msa0143160:CDS | 45.0% | |
GTCGAGGGTGAGTGAATATA+TGG | - | chr1_4:2096527-2096546 | None:intergenic | 45.0% | |
TGTGACAGCGGCAAGAATTT+CGG | + | chr1_4:2096565-2096584 | Msa0143160:CDS | 45.0% | |
! | GAATTTCGGGTCCATGAACA+TGG | + | chr1_4:2096579-2096598 | Msa0143160:CDS | 45.0% |
!! | TGTTGGATGCAGCTTGTTGT+TGG | - | chr1_4:2096642-2096661 | None:intergenic | 45.0% |
AACTTGTCTGCAGCTCAGAA+AGG | + | chr1_4:2096682-2096701 | Msa0143160:CDS | 45.0% | |
ACTTGTCTGCAGCTCAGAAA+GGG | + | chr1_4:2096683-2096702 | Msa0143160:CDS | 45.0% | |
! | TCAACAGTTTTCCTGCAGAG+AGG | - | chr1_4:2096760-2096779 | None:intergenic | 45.0% |
! | GACTTTTGGCGAGATGACAT+TGG | + | chr1_4:2096870-2096889 | Msa0143160:CDS | 45.0% |
! | TTTTGGCGAGATGACATTGG+AGG | + | chr1_4:2096873-2096892 | Msa0143160:CDS | 45.0% |
TGGTTAAAGCAGGGGTAGTT+AGG | + | chr1_4:2096902-2096921 | Msa0143160:CDS | 45.0% | |
GGTTAAAGCAGGGGTAGTTA+GGG | + | chr1_4:2096903-2096922 | Msa0143160:CDS | 45.0% | |
GTAGTTAGGGAACAACAGTC+TGG | + | chr1_4:2096916-2096935 | Msa0143160:CDS | 45.0% | |
!! | CAGGCTGCTTCATTTGCTAT+TGG | + | chr1_4:2097045-2097064 | Msa0143160:CDS | 45.0% |
!! | GCTGCTTCATTTGCTATTGG+CGG | + | chr1_4:2097048-2097067 | Msa0143160:CDS | 45.0% |
CTAGGGATAGTATAGGTACG+GGG | + | chr1_4:2097178-2097197 | Msa0143160:CDS | 45.0% | |
ACCTGTTAGTCCGGTTTCTT+CGG | + | chr1_4:2097302-2097321 | Msa0143160:CDS | 45.0% | |
TTAGTCCGGTTTCTTCGGAT+GGG | + | chr1_4:2097307-2097326 | Msa0143160:CDS | 45.0% | |
GGGATTGGAAACGAAAACTC+GGG | + | chr1_4:2097327-2097346 | Msa0143160:CDS | 45.0% | |
ATTGGAAACGAAAACTCGGG+TGG | + | chr1_4:2097330-2097349 | Msa0143160:CDS | 45.0% | |
GAAAACTCGGGTGGTCAATT+TGG | + | chr1_4:2097339-2097358 | Msa0143160:CDS | 45.0% | |
GGAAGAAAGAGGATGGTTGA+TGG | + | chr1_4:2097384-2097403 | Msa0143160:CDS | 45.0% | |
!! | TGGTTGATGGTCCTGTTGAA+AGG | + | chr1_4:2097397-2097416 | Msa0143160:CDS | 45.0% |
!! | GGTTGATGGTCCTGTTGAAA+GGG | + | chr1_4:2097398-2097417 | Msa0143160:CDS | 45.0% |
TTCTCAACTGAAACAGGCAC+TGG | + | chr1_4:2097809-2097828 | Msa0143160:CDS | 45.0% | |
TTCTTCAGGCTGAACTAGAG+AGG | + | chr1_4:2097920-2097939 | Msa0143160:intron | 45.0% | |
AGAGAGGAGAAGAAGACAAC+AGG | + | chr1_4:2097936-2097955 | Msa0143160:CDS | 45.0% | |
GATGAATTGGCAACAAGGGG+AGG | + | chr1_4:2096414-2096433 | Msa0143160:CDS | 50.0% | |
GGGAGGTAGAATCATTGCAG+AGG | + | chr1_4:2096431-2096450 | Msa0143160:CDS | 50.0% | |
AATTCTTGCCGCTGTCACAG+AGG | - | chr1_4:2096564-2096583 | None:intergenic | 50.0% | |
GTGACAGCGGCAAGAATTTC+GGG | + | chr1_4:2096566-2096585 | Msa0143160:CDS | 50.0% | |
!! | GCTTCATTTGCTATTGGCGG+CGG | + | chr1_4:2097051-2097070 | Msa0143160:CDS | 50.0% |
!! | GGTTTGTTATGGAGGGAGAG+TGG | + | chr1_4:2097221-2097240 | Msa0143160:CDS | 50.0% |
TATGGAGGGAGAGTGGTGAA+TGG | + | chr1_4:2097228-2097247 | Msa0143160:CDS | 50.0% | |
TGTGGCAGTGGCACAAACTA+TGG | + | chr1_4:2097269-2097288 | Msa0143160:CDS | 50.0% | |
GTGGCAGTGGCACAAACTAT+GGG | + | chr1_4:2097270-2097289 | Msa0143160:CDS | 50.0% | |
TGGCAGTGGCACAAACTATG+GGG | + | chr1_4:2097271-2097290 | Msa0143160:CDS | 50.0% | |
AGTGGCACAAACTATGGGGA+TGG | + | chr1_4:2097275-2097294 | Msa0143160:CDS | 50.0% | |
GTGGCACAAACTATGGGGAT+GGG | + | chr1_4:2097276-2097295 | Msa0143160:CDS | 50.0% | |
TCCGAAGAAACCGGACTAAC+AGG | - | chr1_4:2097306-2097325 | None:intergenic | 50.0% | |
GTTAGTCCGGTTTCTTCGGA+TGG | + | chr1_4:2097306-2097325 | Msa0143160:CDS | 50.0% | |
CCAATCCCATCCGAAGAAAC+CGG | - | chr1_4:2097315-2097334 | None:intergenic | 50.0% | |
TGATGGTCCTGTTGAAAGGG+TGG | + | chr1_4:2097401-2097420 | Msa0143160:CDS | 50.0% | |
!! | TTGAAAGGGTGGTGGAGAGA+AGG | + | chr1_4:2097412-2097431 | Msa0143160:CDS | 50.0% |
GATGAATTGGCAACAAGGGG+AGG | + | chr1_4:2096414-2096433 | Msa0143160:CDS | 50.0% | |
GGGAGGTAGAATCATTGCAG+AGG | + | chr1_4:2096431-2096450 | Msa0143160:CDS | 50.0% | |
AATTCTTGCCGCTGTCACAG+AGG | - | chr1_4:2096564-2096583 | None:intergenic | 50.0% | |
GTGACAGCGGCAAGAATTTC+GGG | + | chr1_4:2096566-2096585 | Msa0143160:CDS | 50.0% | |
!! | GCTTCATTTGCTATTGGCGG+CGG | + | chr1_4:2097051-2097070 | Msa0143160:CDS | 50.0% |
!! | GGTTTGTTATGGAGGGAGAG+TGG | + | chr1_4:2097221-2097240 | Msa0143160:CDS | 50.0% |
TATGGAGGGAGAGTGGTGAA+TGG | + | chr1_4:2097228-2097247 | Msa0143160:CDS | 50.0% | |
TGTGGCAGTGGCACAAACTA+TGG | + | chr1_4:2097269-2097288 | Msa0143160:CDS | 50.0% | |
GTGGCAGTGGCACAAACTAT+GGG | + | chr1_4:2097270-2097289 | Msa0143160:CDS | 50.0% | |
TGGCAGTGGCACAAACTATG+GGG | + | chr1_4:2097271-2097290 | Msa0143160:CDS | 50.0% | |
AGTGGCACAAACTATGGGGA+TGG | + | chr1_4:2097275-2097294 | Msa0143160:CDS | 50.0% | |
GTGGCACAAACTATGGGGAT+GGG | + | chr1_4:2097276-2097295 | Msa0143160:CDS | 50.0% | |
TCCGAAGAAACCGGACTAAC+AGG | - | chr1_4:2097306-2097325 | None:intergenic | 50.0% | |
GTTAGTCCGGTTTCTTCGGA+TGG | + | chr1_4:2097306-2097325 | Msa0143160:CDS | 50.0% | |
CCAATCCCATCCGAAGAAAC+CGG | - | chr1_4:2097315-2097334 | None:intergenic | 50.0% | |
TGATGGTCCTGTTGAAAGGG+TGG | + | chr1_4:2097401-2097420 | Msa0143160:CDS | 50.0% | |
!! | TTGAAAGGGTGGTGGAGAGA+AGG | + | chr1_4:2097412-2097431 | Msa0143160:CDS | 50.0% |
GGGAAGGAGAAGAAGCGATC+AGG | + | chr1_4:2096452-2096471 | Msa0143160:CDS | 55.0% | |
GCTGTGTTGGAACTCGTCGA+GGG | - | chr1_4:2096542-2096561 | None:intergenic | 55.0% | |
CAACACAGCCTCTGTGACAG+CGG | + | chr1_4:2096553-2096572 | Msa0143160:CDS | 55.0% | |
!! | GTTTTCCTGCAGAGAGGTGC+AGG | - | chr1_4:2096754-2096773 | None:intergenic | 55.0% |
!! | ACCCCTCGACAACCGACTTT+TGG | + | chr1_4:2096856-2096875 | Msa0143160:CDS | 55.0% |
GCCAAAAGTCGGTTGTCGAG+GGG | - | chr1_4:2096860-2096879 | None:intergenic | 55.0% | |
CGCCAAAAGTCGGTTGTCGA+GGG | - | chr1_4:2096861-2096880 | None:intergenic | 55.0% | |
TCGCCAAAAGTCGGTTGTCG+AGG | - | chr1_4:2096862-2096881 | None:intergenic | 55.0% | |
GTGAGATGACACTGCTGCTG+CGG | - | chr1_4:2096971-2096990 | None:intergenic | 55.0% | |
CAGCAGCAGTGTCATCTCAC+CGG | + | chr1_4:2096971-2096990 | Msa0143160:CDS | 55.0% | |
!! | TCATTTGCTATTGGCGGCGG+CGG | + | chr1_4:2097054-2097073 | Msa0143160:CDS | 55.0% |
TGTGCCACCGTTTGGTATGG+CGG | - | chr1_4:2097102-2097121 | None:intergenic | 55.0% | |
CCATACCAAACGGTGGCACA+GGG | + | chr1_4:2097102-2097121 | Msa0143160:CDS | 55.0% | |
TGGAGGAGTTGGAGAGCCTT+CGG | + | chr1_4:2097128-2097147 | Msa0143160:CDS | 55.0% | |
! | AGTTGGAGAGCCTTCGGGTT+CGG | + | chr1_4:2097134-2097153 | Msa0143160:CDS | 55.0% |
! | CTTCGGGTTCGGGGTATGTT+GGG | + | chr1_4:2097145-2097164 | Msa0143160:CDS | 55.0% |
GGTTCGGGGTATGTTGGGAA+TGG | + | chr1_4:2097150-2097169 | Msa0143160:CDS | 55.0% | |
CCTCCATAACAAACCGCTGG+CGG | - | chr1_4:2097216-2097235 | None:intergenic | 55.0% | |
!! | CGCCAGCGGTTTGTTATGGA+GGG | + | chr1_4:2097214-2097233 | Msa0143160:CDS | 55.0% |
CTCCCTCCATAACAAACCGC+TGG | - | chr1_4:2097219-2097238 | None:intergenic | 55.0% | |
GAGAGTGGTGAATGGAGGAG+CGG | + | chr1_4:2097236-2097255 | Msa0143160:CDS | 55.0% | |
AGAGTGGTGAATGGAGGAGC+GGG | + | chr1_4:2097237-2097256 | Msa0143160:CDS | 55.0% | |
GCACAAACTATGGGGATGGG+CGG | + | chr1_4:2097279-2097298 | Msa0143160:CDS | 55.0% | |
CCGGTTTCTTCGGATGGGAT+TGG | + | chr1_4:2097312-2097331 | Msa0143160:CDS | 55.0% | |
TGGTCCTGTTGAAAGGGTGG+TGG | + | chr1_4:2097404-2097423 | Msa0143160:CDS | 55.0% | |
CTCTCCACCACCCTTTCAAC+AGG | - | chr1_4:2097411-2097430 | None:intergenic | 55.0% | |
GGGAAGGAGAAGAAGCGATC+AGG | + | chr1_4:2096452-2096471 | Msa0143160:CDS | 55.0% | |
GCTGTGTTGGAACTCGTCGA+GGG | - | chr1_4:2096542-2096561 | None:intergenic | 55.0% | |
CAACACAGCCTCTGTGACAG+CGG | + | chr1_4:2096553-2096572 | Msa0143160:CDS | 55.0% | |
!! | GTTTTCCTGCAGAGAGGTGC+AGG | - | chr1_4:2096754-2096773 | None:intergenic | 55.0% |
!! | ACCCCTCGACAACCGACTTT+TGG | + | chr1_4:2096856-2096875 | Msa0143160:CDS | 55.0% |
GCCAAAAGTCGGTTGTCGAG+GGG | - | chr1_4:2096860-2096879 | None:intergenic | 55.0% | |
CGCCAAAAGTCGGTTGTCGA+GGG | - | chr1_4:2096861-2096880 | None:intergenic | 55.0% | |
TCGCCAAAAGTCGGTTGTCG+AGG | - | chr1_4:2096862-2096881 | None:intergenic | 55.0% | |
GTGAGATGACACTGCTGCTG+CGG | - | chr1_4:2096971-2096990 | None:intergenic | 55.0% | |
CAGCAGCAGTGTCATCTCAC+CGG | + | chr1_4:2096971-2096990 | Msa0143160:CDS | 55.0% | |
!! | TCATTTGCTATTGGCGGCGG+CGG | + | chr1_4:2097054-2097073 | Msa0143160:CDS | 55.0% |
TGTGCCACCGTTTGGTATGG+CGG | - | chr1_4:2097102-2097121 | None:intergenic | 55.0% | |
CCATACCAAACGGTGGCACA+GGG | + | chr1_4:2097102-2097121 | Msa0143160:CDS | 55.0% | |
TGGAGGAGTTGGAGAGCCTT+CGG | + | chr1_4:2097128-2097147 | Msa0143160:CDS | 55.0% | |
! | AGTTGGAGAGCCTTCGGGTT+CGG | + | chr1_4:2097134-2097153 | Msa0143160:CDS | 55.0% |
! | CTTCGGGTTCGGGGTATGTT+GGG | + | chr1_4:2097145-2097164 | Msa0143160:CDS | 55.0% |
GGTTCGGGGTATGTTGGGAA+TGG | + | chr1_4:2097150-2097169 | Msa0143160:CDS | 55.0% | |
CCTCCATAACAAACCGCTGG+CGG | - | chr1_4:2097216-2097235 | None:intergenic | 55.0% | |
!! | CGCCAGCGGTTTGTTATGGA+GGG | + | chr1_4:2097214-2097233 | Msa0143160:CDS | 55.0% |
CTCCCTCCATAACAAACCGC+TGG | - | chr1_4:2097219-2097238 | None:intergenic | 55.0% | |
GAGAGTGGTGAATGGAGGAG+CGG | + | chr1_4:2097236-2097255 | Msa0143160:CDS | 55.0% | |
AGAGTGGTGAATGGAGGAGC+GGG | + | chr1_4:2097237-2097256 | Msa0143160:CDS | 55.0% | |
GCACAAACTATGGGGATGGG+CGG | + | chr1_4:2097279-2097298 | Msa0143160:CDS | 55.0% | |
CCGGTTTCTTCGGATGGGAT+TGG | + | chr1_4:2097312-2097331 | Msa0143160:CDS | 55.0% | |
TGGTCCTGTTGAAAGGGTGG+TGG | + | chr1_4:2097404-2097423 | Msa0143160:CDS | 55.0% | |
CTCTCCACCACCCTTTCAAC+AGG | - | chr1_4:2097411-2097430 | None:intergenic | 55.0% | |
GGCTGTGTTGGAACTCGTCG+AGG | - | chr1_4:2096543-2096562 | None:intergenic | 60.0% | |
CGCTGTCACAGAGGCTGTGT+TGG | - | chr1_4:2096555-2096574 | None:intergenic | 60.0% | |
CGATTCCTGCACCTCTCTGC+AGG | + | chr1_4:2096746-2096765 | Msa0143160:CDS | 60.0% | |
CGGTTGTCGAGGGGTAGACT+CGG | - | chr1_4:2096851-2096870 | None:intergenic | 60.0% | |
!! | GGTGGTGGTGCTATGGCAAC+TGG | - | chr1_4:2096946-2096965 | None:intergenic | 60.0% |
ACTGCGGCGTAATGCTGCTG+GGG | - | chr1_4:2096997-2097016 | None:intergenic | 60.0% | |
CACTGCGGCGTAATGCTGCT+GGG | - | chr1_4:2096998-2097017 | None:intergenic | 60.0% | |
ACACTGCGGCGTAATGCTGC+TGG | - | chr1_4:2096999-2097018 | None:intergenic | 60.0% | |
CGGCGGTGGGAATCTGAATG+TGG | + | chr1_4:2097071-2097090 | Msa0143160:CDS | 60.0% | |
GGTTGCGCCGCCATACCAAA+CGG | + | chr1_4:2097092-2097111 | Msa0143160:CDS | 60.0% | |
GCCATACCAAACGGTGGCAC+AGG | + | chr1_4:2097101-2097120 | Msa0143160:CDS | 60.0% | |
CCCTGTGCCACCGTTTGGTA+TGG | - | chr1_4:2097105-2097124 | None:intergenic | 60.0% | |
TACCAAACGGTGGCACAGGG+AGG | + | chr1_4:2097105-2097124 | Msa0143160:CDS | 60.0% | |
GGAGGAGTTGGAGAGCCTTC+GGG | + | chr1_4:2097129-2097148 | Msa0143160:CDS | 60.0% | |
! | GTTGGAGAGCCTTCGGGTTC+GGG | + | chr1_4:2097135-2097154 | Msa0143160:CDS | 60.0% |
! | TTGGAGAGCCTTCGGGTTCG+GGG | + | chr1_4:2097136-2097155 | Msa0143160:CDS | 60.0% |
CCAACATACCCCGAACCCGA+AGG | - | chr1_4:2097147-2097166 | None:intergenic | 60.0% | |
! | CCTTCGGGTTCGGGGTATGT+TGG | + | chr1_4:2097144-2097163 | Msa0143160:CDS | 60.0% |
CCATAACAAACCGCTGGCGG+CGG | - | chr1_4:2097213-2097232 | None:intergenic | 60.0% | |
!! | CCGCCAGCGGTTTGTTATGG+AGG | + | chr1_4:2097213-2097232 | Msa0143160:CDS | 60.0% |
GGAGGGAGAGTGGTGAATGG+AGG | + | chr1_4:2097231-2097250 | Msa0143160:CDS | 60.0% | |
AATGGAGGAGCGGGCGGTTA+TGG | + | chr1_4:2097246-2097265 | Msa0143160:CDS | 60.0% | |
GATGGGCGGACCTGTTAGTC+CGG | + | chr1_4:2097293-2097312 | Msa0143160:CDS | 60.0% | |
TGGTGGAGAGAAGGCAGAGG+AGG | + | chr1_4:2097421-2097440 | Msa0143160:CDS | 60.0% | |
GGCTGTGTTGGAACTCGTCG+AGG | - | chr1_4:2096543-2096562 | None:intergenic | 60.0% | |
CGCTGTCACAGAGGCTGTGT+TGG | - | chr1_4:2096555-2096574 | None:intergenic | 60.0% | |
CGATTCCTGCACCTCTCTGC+AGG | + | chr1_4:2096746-2096765 | Msa0143160:CDS | 60.0% | |
CGGTTGTCGAGGGGTAGACT+CGG | - | chr1_4:2096851-2096870 | None:intergenic | 60.0% | |
!! | GGTGGTGGTGCTATGGCAAC+TGG | - | chr1_4:2096946-2096965 | None:intergenic | 60.0% |
ACTGCGGCGTAATGCTGCTG+GGG | - | chr1_4:2096997-2097016 | None:intergenic | 60.0% | |
CACTGCGGCGTAATGCTGCT+GGG | - | chr1_4:2096998-2097017 | None:intergenic | 60.0% | |
ACACTGCGGCGTAATGCTGC+TGG | - | chr1_4:2096999-2097018 | None:intergenic | 60.0% | |
CGGCGGTGGGAATCTGAATG+TGG | + | chr1_4:2097071-2097090 | Msa0143160:CDS | 60.0% | |
GGTTGCGCCGCCATACCAAA+CGG | + | chr1_4:2097092-2097111 | Msa0143160:CDS | 60.0% | |
GCCATACCAAACGGTGGCAC+AGG | + | chr1_4:2097101-2097120 | Msa0143160:CDS | 60.0% | |
CCCTGTGCCACCGTTTGGTA+TGG | - | chr1_4:2097105-2097124 | None:intergenic | 60.0% | |
TACCAAACGGTGGCACAGGG+AGG | + | chr1_4:2097105-2097124 | Msa0143160:CDS | 60.0% | |
GGAGGAGTTGGAGAGCCTTC+GGG | + | chr1_4:2097129-2097148 | Msa0143160:CDS | 60.0% | |
! | GTTGGAGAGCCTTCGGGTTC+GGG | + | chr1_4:2097135-2097154 | Msa0143160:CDS | 60.0% |
! | TTGGAGAGCCTTCGGGTTCG+GGG | + | chr1_4:2097136-2097155 | Msa0143160:CDS | 60.0% |
CCAACATACCCCGAACCCGA+AGG | - | chr1_4:2097147-2097166 | None:intergenic | 60.0% | |
! | CCTTCGGGTTCGGGGTATGT+TGG | + | chr1_4:2097144-2097163 | Msa0143160:CDS | 60.0% |
CCATAACAAACCGCTGGCGG+CGG | - | chr1_4:2097213-2097232 | None:intergenic | 60.0% | |
!! | CCGCCAGCGGTTTGTTATGG+AGG | + | chr1_4:2097213-2097232 | Msa0143160:CDS | 60.0% |
GGAGGGAGAGTGGTGAATGG+AGG | + | chr1_4:2097231-2097250 | Msa0143160:CDS | 60.0% | |
AATGGAGGAGCGGGCGGTTA+TGG | + | chr1_4:2097246-2097265 | Msa0143160:CDS | 60.0% | |
GATGGGCGGACCTGTTAGTC+CGG | + | chr1_4:2097293-2097312 | Msa0143160:CDS | 60.0% | |
TGGTGGAGAGAAGGCAGAGG+AGG | + | chr1_4:2097421-2097440 | Msa0143160:CDS | 60.0% | |
! | TGCGGCAGGTGGTGGTGCTA+TGG | - | chr1_4:2096953-2096972 | None:intergenic | 65.0% |
GATGACACTGCTGCTGCGGC+AGG | - | chr1_4:2096967-2096986 | None:intergenic | 65.0% | |
!! | TTTGCTATTGGCGGCGGCGG+TGG | + | chr1_4:2097057-2097076 | Msa0143160:CDS | 65.0% |
! | TTGCTATTGGCGGCGGCGGT+GGG | + | chr1_4:2097058-2097077 | Msa0143160:CDS | 65.0% |
TGCGCCGCCATACCAAACGG+TGG | + | chr1_4:2097095-2097114 | Msa0143160:CDS | 65.0% | |
CACCTCCCTGTGCCACCGTT+TGG | - | chr1_4:2097110-2097129 | None:intergenic | 65.0% | |
CAAACGGTGGCACAGGGAGG+TGG | + | chr1_4:2097108-2097127 | Msa0143160:CDS | 65.0% | |
GCACAGGGAGGTGGAGGAGT+TGG | + | chr1_4:2097117-2097136 | Msa0143160:CDS | 65.0% | |
TAACAAACCGCTGGCGGCGG+CGG | - | chr1_4:2097210-2097229 | None:intergenic | 65.0% | |
!! | CCGCCGCCAGCGGTTTGTTA+TGG | + | chr1_4:2097210-2097229 | Msa0143160:CDS | 65.0% |
GTGGTGAATGGAGGAGCGGG+CGG | + | chr1_4:2097240-2097259 | Msa0143160:CDS | 65.0% | |
AGGAGCGGGCGGTTATGGTG+TGG | + | chr1_4:2097251-2097270 | Msa0143160:CDS | 65.0% | |
GGGCGGTTATGGTGTGGCAG+TGG | + | chr1_4:2097257-2097276 | Msa0143160:CDS | 65.0% | |
!! | GGGTGGTGGAGAGAAGGCAG+AGG | + | chr1_4:2097418-2097437 | Msa0143160:CDS | 65.0% |
! | TGCGGCAGGTGGTGGTGCTA+TGG | - | chr1_4:2096953-2096972 | None:intergenic | 65.0% |
GATGACACTGCTGCTGCGGC+AGG | - | chr1_4:2096967-2096986 | None:intergenic | 65.0% | |
!! | TTTGCTATTGGCGGCGGCGG+TGG | + | chr1_4:2097057-2097076 | Msa0143160:CDS | 65.0% |
! | TTGCTATTGGCGGCGGCGGT+GGG | + | chr1_4:2097058-2097077 | Msa0143160:CDS | 65.0% |
TGCGCCGCCATACCAAACGG+TGG | + | chr1_4:2097095-2097114 | Msa0143160:CDS | 65.0% | |
CACCTCCCTGTGCCACCGTT+TGG | - | chr1_4:2097110-2097129 | None:intergenic | 65.0% | |
CAAACGGTGGCACAGGGAGG+TGG | + | chr1_4:2097108-2097127 | Msa0143160:CDS | 65.0% | |
GCACAGGGAGGTGGAGGAGT+TGG | + | chr1_4:2097117-2097136 | Msa0143160:CDS | 65.0% | |
TAACAAACCGCTGGCGGCGG+CGG | - | chr1_4:2097210-2097229 | None:intergenic | 65.0% | |
!! | CCGCCGCCAGCGGTTTGTTA+TGG | + | chr1_4:2097210-2097229 | Msa0143160:CDS | 65.0% |
GTGGTGAATGGAGGAGCGGG+CGG | + | chr1_4:2097240-2097259 | Msa0143160:CDS | 65.0% | |
AGGAGCGGGCGGTTATGGTG+TGG | + | chr1_4:2097251-2097270 | Msa0143160:CDS | 65.0% | |
GGGCGGTTATGGTGTGGCAG+TGG | + | chr1_4:2097257-2097276 | Msa0143160:CDS | 65.0% | |
!! | GGGTGGTGGAGAGAAGGCAG+AGG | + | chr1_4:2097418-2097437 | Msa0143160:CDS | 65.0% |
ACTGCTGCTGCGGCAGGTGG+TGG | - | chr1_4:2096961-2096980 | None:intergenic | 70.0% | |
GACACTGCTGCTGCGGCAGG+TGG | - | chr1_4:2096964-2096983 | None:intergenic | 70.0% | |
CGGCGTAATGCTGCTGGGGC+CGG | - | chr1_4:2096993-2097012 | None:intergenic | 70.0% | |
ACGGTGGCACAGGGAGGTGG+AGG | + | chr1_4:2097111-2097130 | Msa0143160:CDS | 70.0% | |
ACTGCTGCTGCGGCAGGTGG+TGG | - | chr1_4:2096961-2096980 | None:intergenic | 70.0% | |
GACACTGCTGCTGCGGCAGG+TGG | - | chr1_4:2096964-2096983 | None:intergenic | 70.0% | |
CGGCGTAATGCTGCTGGGGC+CGG | - | chr1_4:2096993-2097012 | None:intergenic | 70.0% | |
ACGGTGGCACAGGGAGGTGG+AGG | + | chr1_4:2097111-2097130 | Msa0143160:CDS | 70.0% | |
GTATCCTCCGCCGCCGCCAG+CGG | + | chr1_4:2097200-2097219 | Msa0143160:CDS | 75.0% | |
GTATCCTCCGCCGCCGCCAG+CGG | + | chr1_4:2097200-2097219 | Msa0143160:CDS | 75.0% | |
! | CAAACCGCTGGCGGCGGCGG+AGG | - | chr1_4:2097207-2097226 | None:intergenic | 80.0% |
! | CAAACCGCTGGCGGCGGCGG+AGG | - | chr1_4:2097207-2097226 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 2096394 | 2098204 | 2096394 | ID=Msa0143160;Name=Msa0143160 |
chr1_4 | mRNA | 2096394 | 2098204 | 2096394 | ID=Msa0143160-mRNA-1;Parent=Msa0143160;Name=Msa0143160-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0.66|0.25|1|1|1|4|0|444 |
chr1_4 | exon | 2096394 | 2097491 | 2096394 | ID=Msa0143160-mRNA-1:exon:814;Parent=Msa0143160-mRNA-1 |
chr1_4 | exon | 2097759 | 2097830 | 2097759 | ID=Msa0143160-mRNA-1:exon:815;Parent=Msa0143160-mRNA-1 |
chr1_4 | exon | 2097928 | 2097970 | 2097928 | ID=Msa0143160-mRNA-1:exon:816;Parent=Msa0143160-mRNA-1 |
chr1_4 | exon | 2098083 | 2098204 | 2098083 | ID=Msa0143160-mRNA-1:exon:817;Parent=Msa0143160-mRNA-1 |
chr1_4 | CDS | 2096394 | 2097491 | 2096394 | ID=Msa0143160-mRNA-1:cds;Parent=Msa0143160-mRNA-1 |
chr1_4 | CDS | 2097759 | 2097830 | 2097759 | ID=Msa0143160-mRNA-1:cds;Parent=Msa0143160-mRNA-1 |
chr1_4 | CDS | 2097928 | 2097970 | 2097928 | ID=Msa0143160-mRNA-1:cds;Parent=Msa0143160-mRNA-1 |
chr1_4 | CDS | 2098083 | 2098204 | 2098083 | ID=Msa0143160-mRNA-1:cds;Parent=Msa0143160-mRNA-1 |
Gene Sequence |
Protein sequence |