Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1164680 | XP_003625810.1 | 96.296 | 432 | 9 | 3 | 1 | 426 | 1 | 431 | 0.0 | 840 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1164680 | sp|Q9SJN0|ABI5_ARATH | 45.248 | 484 | 165 | 13 | 1 | 426 | 1 | 442 | 2.58e-109 | 332 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1164680 | G7L631 | 96.296 | 432 | 9 | 3 | 1 | 426 | 1 | 431 | 0.0 | 840 |
Gene ID | Type | Classification |
---|---|---|
Msa1164680 | TF | bZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0033220 | Msa1164680 | 0.810374 | 1.189792e-50 | -8.615850e-47 |
Msa0038530 | Msa1164680 | 0.808207 | 3.469257e-50 | -8.615850e-47 |
Msa0079880 | Msa1164680 | 0.815372 | 9.562515e-52 | -8.615850e-47 |
Msa0080030 | Msa1164680 | 0.804218 | 2.400121e-49 | -8.615850e-47 |
Msa0610700 | Msa1164680 | -0.800557 | 1.363138e-48 | -8.615850e-47 |
Msa0735010 | Msa1164680 | 0.840142 | 1.038789e-57 | -8.615850e-47 |
Msa0745140 | Msa1164680 | 0.807076 | 6.032132e-50 | -8.615850e-47 |
Msa0776640 | Msa1164680 | 0.806350 | 8.583028e-50 | -8.615850e-47 |
Msa0776940 | Msa1164680 | 0.833036 | 6.717391e-56 | -8.615850e-47 |
Msa0825920 | Msa1164680 | 0.804416 | 2.183132e-49 | -8.615850e-47 |
Msa0143160 | Msa1164680 | 0.850969 | 1.203899e-60 | -8.615850e-47 |
Msa0165640 | Msa1164680 | 0.800217 | 1.598745e-48 | -8.615850e-47 |
Msa0437480 | Msa1164680 | 0.801402 | 9.156411e-49 | -8.615850e-47 |
Msa0440350 | Msa1164680 | 0.812973 | 3.237346e-51 | -8.615850e-47 |
Msa0481670 | Msa1164680 | 0.803660 | 3.135729e-49 | -8.615850e-47 |
Msa1022420 | Msa1164680 | 0.802983 | 4.329993e-49 | -8.615850e-47 |
Msa1068940 | Msa1164680 | 0.810317 | 1.223992e-50 | -8.615850e-47 |
Msa1106590 | Msa1164680 | 0.800801 | 1.215483e-48 | -8.615850e-47 |
Msa0284800 | Msa1164680 | 0.804506 | 2.090335e-49 | -8.615850e-47 |
Msa0354840 | Msa1164680 | 0.813774 | 2.158788e-51 | -8.615850e-47 |
Msa1147700 | Msa1164680 | 0.802425 | 5.644862e-49 | -8.615850e-47 |
Msa1149910 | Msa1164680 | 0.807593 | 4.684957e-50 | -8.615850e-47 |
Msa1164680 | Msa1192360 | 0.813885 | 2.041007e-51 | -8.615850e-47 |
Msa1164680 | Msa1242160 | 0.800276 | 1.555289e-48 | -8.615850e-47 |
Msa1164680 | Msa1250660 | 0.838558 | 2.678579e-57 | -8.615850e-47 |
Msa1164680 | Msa1283980 | 0.814077 | 1.851297e-51 | -8.615850e-47 |
Msa1164680 | Msa1288070 | 0.812022 | 5.224484e-51 | -8.615850e-47 |
Msa1164680 | Msa1322960 | 0.802014 | 6.858954e-49 | -8.615850e-47 |
Msa1164680 | Msa1322980 | 0.818835 | 1.593363e-52 | -8.615850e-47 |
Msa1164680 | Msa1343580 | 0.874143 | 8.501656e-68 | -8.615850e-47 |
Msa1164680 | Msa1386130 | 0.908867 | 1.068284e-81 | -8.615850e-47 |
Msa1164680 | Msa1387450 | -0.801284 | 9.681628e-49 | -8.615850e-47 |
Msa1164680 | Msa1389820 | 0.800456 | 1.429396e-48 | -8.615850e-47 |
Msa1164680 | Msa1407840 | 0.803457 | 3.453997e-49 | -8.615850e-47 |
Msa1164680 | Msa1427680 | 0.912621 | 1.579653e-83 | -8.615850e-47 |
Msa1164680 | Msa1437810 | 0.804464 | 2.132902e-49 | -8.615850e-47 |
Msa0566280 | Msa1164680 | 0.803573 | 3.268131e-49 | -8.615850e-47 |
Msa0865420 | Msa1164680 | 0.805032 | 1.623505e-49 | -8.615850e-47 |
Msa0908270 | Msa1164680 | -0.805552 | 1.263557e-49 | -8.615850e-47 |
Msa0909260 | Msa1164680 | 0.806963 | 6.372625e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1164680 | MtrunA17_Chr7g0266211 | 96.296 | 432 | 9 | 3 | 1 | 426 | 1 | 431 | 0.0 | 840 |
Msa1164680 | MtrunA17_Chr8g0355121 | 34.758 | 351 | 137 | 11 | 37 | 383 | 23 | 285 | 3.60e-42 | 151 |
Msa1164680 | MtrunA17_Chr4g0044771 | 33.981 | 412 | 149 | 18 | 43 | 401 | 22 | 363 | 1.82e-40 | 148 |
Msa1164680 | MtrunA17_Chr3g0080341 | 35.511 | 352 | 155 | 11 | 38 | 389 | 20 | 299 | 6.72e-40 | 145 |
Msa1164680 | MtrunA17_Chr2g0321381 | 49.275 | 138 | 61 | 4 | 43 | 180 | 26 | 154 | 1.37e-33 | 127 |
Msa1164680 | MtrunA17_Chr2g0321381 | 46.154 | 143 | 48 | 4 | 261 | 388 | 161 | 289 | 6.74e-19 | 86.7 |
Msa1164680 | MtrunA17_Chr2g0321411 | 52.381 | 126 | 47 | 3 | 293 | 414 | 165 | 281 | 2.99e-30 | 118 |
Msa1164680 | MtrunA17_Chr2g0321411 | 47.059 | 136 | 59 | 5 | 44 | 176 | 13 | 138 | 1.85e-28 | 113 |
Msa1164680 | MtrunA17_Chr3g0133971 | 46.269 | 134 | 47 | 4 | 44 | 173 | 32 | 144 | 1.71e-23 | 102 |
Msa1164680 | MtrunA17_Chr3g0133971 | 46.043 | 139 | 67 | 3 | 275 | 407 | 283 | 419 | 1.91e-22 | 99.0 |
Msa1164680 | MtrunA17_Chr6g0460301 | 38.571 | 140 | 76 | 3 | 41 | 177 | 18 | 150 | 1.00e-17 | 83.6 |
Msa1164680 | MtrunA17_Chr7g0254991 | 67.164 | 67 | 20 | 2 | 325 | 390 | 233 | 298 | 1.46e-17 | 83.2 |
Msa1164680 | MtrunA17_Chr7g0254991 | 35.606 | 132 | 68 | 3 | 44 | 173 | 21 | 137 | 4.53e-15 | 75.9 |
Msa1164680 | MtrunA17_Chr4g0051101 | 49.315 | 73 | 36 | 1 | 326 | 397 | 116 | 188 | 1.07e-14 | 72.4 |
Msa1164680 | MtrunA17_Chr1g0201751 | 53.030 | 66 | 31 | 0 | 335 | 400 | 157 | 222 | 9.53e-13 | 67.8 |
Msa1164680 | MtrunA17_Chr5g0440841 | 58.621 | 58 | 24 | 0 | 326 | 383 | 184 | 241 | 3.72e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1164680 | AT2G36270.1 | 45.248 | 484 | 165 | 13 | 1 | 426 | 1 | 442 | 2.62e-110 | 332 |
Msa1164680 | AT2G36270.2 | 45.248 | 484 | 165 | 13 | 1 | 426 | 1 | 442 | 2.62e-110 | 332 |
Msa1164680 | AT2G36270.3 | 45.595 | 454 | 147 | 13 | 1 | 396 | 1 | 412 | 1.40e-102 | 312 |
Msa1164680 | AT1G45249.1 | 36.700 | 406 | 178 | 16 | 44 | 402 | 26 | 399 | 5.35e-45 | 161 |
Msa1164680 | AT1G45249.7 | 36.700 | 406 | 178 | 16 | 44 | 402 | 41 | 414 | 7.30e-45 | 161 |
Msa1164680 | AT1G45249.6 | 36.700 | 406 | 178 | 16 | 44 | 402 | 41 | 414 | 7.30e-45 | 161 |
Msa1164680 | AT1G45249.3 | 35.934 | 423 | 180 | 18 | 38 | 402 | 21 | 410 | 1.00e-41 | 153 |
Msa1164680 | AT1G49720.1 | 30.946 | 391 | 223 | 10 | 29 | 398 | 6 | 370 | 2.88e-30 | 120 |
Msa1164680 | AT1G49720.3 | 30.946 | 391 | 223 | 10 | 29 | 398 | 6 | 370 | 2.88e-30 | 120 |
Msa1164680 | AT3G44460.1 | 52.555 | 137 | 54 | 5 | 38 | 173 | 35 | 161 | 4.10e-29 | 116 |
Msa1164680 | AT3G44460.1 | 53.211 | 109 | 48 | 1 | 316 | 424 | 224 | 329 | 6.89e-21 | 93.6 |
Msa1164680 | AT5G42910.1 | 27.053 | 414 | 229 | 14 | 26 | 416 | 7 | 370 | 4.33e-25 | 106 |
Msa1164680 | AT3G56850.1 | 46.939 | 147 | 63 | 5 | 27 | 173 | 5 | 136 | 7.37e-25 | 103 |
Msa1164680 | AT3G56850.1 | 67.797 | 59 | 18 | 1 | 326 | 383 | 211 | 269 | 1.29e-15 | 77.4 |
Msa1164680 | AT1G49720.2 | 39.634 | 164 | 70 | 6 | 29 | 176 | 6 | 156 | 1.91e-22 | 99.0 |
Msa1164680 | AT1G49720.2 | 55.556 | 72 | 32 | 0 | 326 | 397 | 298 | 369 | 2.04e-16 | 81.3 |
Msa1164680 | AT2G41070.5 | 35.789 | 190 | 77 | 7 | 25 | 205 | 3 | 156 | 1.19e-20 | 90.9 |
Msa1164680 | AT2G41070.5 | 67.241 | 58 | 19 | 0 | 326 | 383 | 177 | 234 | 6.50e-16 | 77.4 |
Msa1164680 | AT2G41070.3 | 35.789 | 190 | 77 | 7 | 25 | 205 | 3 | 156 | 2.71e-20 | 90.5 |
Msa1164680 | AT2G41070.3 | 64.615 | 65 | 22 | 1 | 326 | 390 | 177 | 240 | 2.78e-16 | 79.0 |
Msa1164680 | AT2G41070.1 | 35.789 | 190 | 77 | 7 | 25 | 205 | 3 | 156 | 2.71e-20 | 90.5 |
Msa1164680 | AT2G41070.1 | 64.615 | 65 | 22 | 1 | 326 | 390 | 177 | 240 | 2.78e-16 | 79.0 |
Msa1164680 | AT2G41070.2 | 35.789 | 190 | 77 | 7 | 25 | 205 | 3 | 156 | 2.71e-20 | 90.5 |
Msa1164680 | AT2G41070.2 | 64.615 | 65 | 22 | 1 | 326 | 390 | 177 | 240 | 2.78e-16 | 79.0 |
Msa1164680 | AT2G41070.4 | 35.789 | 190 | 77 | 7 | 25 | 205 | 12 | 165 | 3.14e-20 | 90.5 |
Msa1164680 | AT2G41070.4 | 64.615 | 65 | 22 | 1 | 326 | 390 | 186 | 249 | 2.60e-16 | 79.0 |
Msa1164680 | AT3G19290.4 | 40.426 | 141 | 78 | 3 | 38 | 173 | 34 | 173 | 4.44e-20 | 92.0 |
Msa1164680 | AT3G19290.4 | 44.737 | 114 | 50 | 3 | 284 | 397 | 309 | 409 | 6.87e-17 | 82.4 |
Msa1164680 | AT3G19290.3 | 40.426 | 141 | 78 | 3 | 38 | 173 | 34 | 173 | 5.97e-20 | 92.0 |
Msa1164680 | AT3G19290.3 | 45.833 | 120 | 52 | 3 | 284 | 403 | 309 | 415 | 2.75e-18 | 87.0 |
Msa1164680 | AT3G19290.1 | 40.426 | 141 | 78 | 3 | 38 | 173 | 34 | 173 | 6.45e-20 | 91.7 |
Msa1164680 | AT3G19290.1 | 45.833 | 120 | 51 | 4 | 284 | 403 | 309 | 414 | 3.95e-17 | 83.6 |
Msa1164680 | AT3G19290.5 | 40.426 | 141 | 78 | 3 | 38 | 173 | 34 | 173 | 6.45e-20 | 91.7 |
Msa1164680 | AT3G19290.5 | 45.833 | 120 | 51 | 4 | 284 | 403 | 309 | 414 | 3.95e-17 | 83.6 |
Msa1164680 | AT3G19290.2 | 40.426 | 141 | 78 | 3 | 38 | 173 | 34 | 173 | 8.14e-20 | 91.3 |
Msa1164680 | AT4G34000.3 | 38.182 | 165 | 71 | 6 | 38 | 174 | 27 | 188 | 1.64e-19 | 90.9 |
Msa1164680 | AT4G34000.3 | 53.659 | 82 | 31 | 1 | 324 | 398 | 357 | 438 | 3.04e-17 | 84.0 |
Msa1164680 | AT4G34000.1 | 38.095 | 168 | 73 | 6 | 35 | 174 | 24 | 188 | 1.93e-19 | 90.5 |
Msa1164680 | AT4G34000.1 | 57.333 | 75 | 32 | 0 | 324 | 398 | 357 | 431 | 3.76e-19 | 89.7 |
Msa1164680 | AT4G34000.4 | 38.095 | 168 | 73 | 6 | 35 | 174 | 24 | 188 | 1.93e-19 | 90.5 |
Msa1164680 | AT4G34000.4 | 57.333 | 75 | 32 | 0 | 324 | 398 | 357 | 431 | 3.76e-19 | 89.7 |
Msa1164680 | AT4G34000.2 | 38.095 | 168 | 73 | 6 | 35 | 174 | 24 | 188 | 1.93e-19 | 90.5 |
Msa1164680 | AT4G34000.2 | 57.333 | 75 | 32 | 0 | 324 | 398 | 357 | 431 | 3.76e-19 | 89.7 |
Msa1164680 | AT5G44080.1 | 44.762 | 105 | 55 | 2 | 318 | 419 | 207 | 311 | 4.98e-15 | 75.9 |
Msa1164680 | AT1G45249.10 | 53.488 | 86 | 28 | 4 | 289 | 366 | 282 | 363 | 2.17e-14 | 74.7 |
Msa1164680 | AT1G45249.5 | 53.488 | 86 | 28 | 4 | 289 | 366 | 282 | 363 | 2.17e-14 | 74.7 |
Msa1164680 | AT2G17770.2 | 41.026 | 117 | 51 | 3 | 266 | 382 | 69 | 167 | 4.01e-14 | 71.2 |
Msa1164680 | AT1G45249.4 | 48.485 | 99 | 33 | 5 | 289 | 373 | 282 | 376 | 1.93e-13 | 72.0 |
Msa1164680 | AT1G45249.8 | 48.485 | 99 | 33 | 5 | 289 | 373 | 282 | 376 | 1.93e-13 | 72.0 |
Msa1164680 | AT1G45249.2 | 48.485 | 99 | 33 | 5 | 289 | 373 | 282 | 376 | 1.93e-13 | 72.0 |
Msa1164680 | AT1G45249.9 | 48.485 | 99 | 33 | 5 | 289 | 373 | 282 | 376 | 1.93e-13 | 72.0 |
Msa1164680 | AT1G03970.1 | 50.000 | 76 | 36 | 1 | 323 | 398 | 173 | 246 | 2.51e-12 | 67.4 |
Msa1164680 | AT4G35900.1 | 33.951 | 162 | 89 | 6 | 235 | 389 | 114 | 264 | 7.17e-12 | 66.2 |
Find 150 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAACTCGGGTGGTCAATT+TGG | 0.166727 | 7_4:-56373627 | Msa1164680:CDS |
CAGGAATCGATAACGAATTT+TGG | 0.216092 | 7_4:+56374234 | None:intergenic |
GTTGGAGAGCCTTCGGGTTC+GGG | 0.231478 | 7_4:-56373831 | Msa1164680:CDS |
CAGGCTGCTTCATTTGCTAT+TGG | 0.239497 | 7_4:-56373921 | Msa1164680:CDS |
GTGACAGCGGCAAGAATTTC+GGG | 0.248709 | 7_4:-56374400 | Msa1164680:CDS |
AGTTGGAGAGCCTTCGGGTT+CGG | 0.262820 | 7_4:-56373832 | Msa1164680:CDS |
GATGACATTGGAGGATTTCT+TGG | 0.268533 | 7_4:-56374084 | Msa1164680:CDS |
TGTGACAGCGGCAAGAATTT+CGG | 0.276728 | 7_4:-56374401 | Msa1164680:CDS |
TGGTTAAAGCAGGGGTAGTT+AGG | 0.281516 | 7_4:-56374064 | Msa1164680:CDS |
GCCATTGTAGAGTTGTTATT+AGG | 0.296465 | 7_4:+56373945 | None:intergenic |
CCGCCGCCAGCGGTTTGTTA+TGG | 0.308148 | 7_4:-56373756 | Msa1164680:CDS |
GTTGTTGCTGTTATTATTGT+TGG | 0.310662 | 7_4:+56374310 | None:intergenic |
TGTGGCAGTGGCACAAACTA+TGG | 0.315000 | 7_4:-56373697 | Msa1164680:CDS |
ACCCCTCGACAACCGACTTT+TGG | 0.322363 | 7_4:-56374110 | Msa1164680:CDS |
ACCTGTTAGTCCGGTTTCTT+CGG | 0.327709 | 7_4:-56373664 | Msa1164680:CDS |
AAAACTCGGGTGGTCAATTT+GGG | 0.341515 | 7_4:-56373626 | Msa1164680:CDS |
ACACTGCGGCGTAATGCTGC+TGG | 0.344613 | 7_4:+56373970 | None:intergenic |
TTACCTCATGCAGTGTTTAG+AGG | 0.347444 | 7_4:-56372930 | Msa1164680:intron |
GGAAAACTGTTGAACAAGTT+TGG | 0.348644 | 7_4:-56374199 | Msa1164680:CDS |
CTCTCCACCACCCTTTCAAC+AGG | 0.360473 | 7_4:+56373558 | None:intergenic |
CACTGCGGCGTAATGCTGCT+GGG | 0.364765 | 7_4:+56373971 | None:intergenic |
TGGAGGAGTTGGAGAGCCTT+CGG | 0.365531 | 7_4:-56373838 | Msa1164680:CDS |
TCCGAAGAAACCGGACTAAC+AGG | 0.372237 | 7_4:+56373663 | None:intergenic |
GTCGAGGGTGAGTGAATATA+TGG | 0.374227 | 7_4:+56374442 | None:intergenic |
TTGCTATTGGTGGCGGCGGC+GGG | 0.379794 | 7_4:-56373908 | Msa1164680:CDS |
CTTCGGGTTCGGGGTATGTT+GGG | 0.383128 | 7_4:-56373821 | Msa1164680:CDS |
CAAACCGCTGGCGGCGGCGG+AGG | 0.394088 | 7_4:+56373762 | None:intergenic |
ACTGCTGCTGCGGCAGGTGG+TGG | 0.397437 | 7_4:+56374008 | None:intergenic |
TAGAAACTCATCCATGTTCA+TGG | 0.401819 | 7_4:+56374376 | None:intergenic |
AATGGAGGGGCGGGCAGTTA+TGG | 0.405922 | 7_4:-56373720 | Msa1164680:CDS |
AGAGAATTCTCAACTGAAAC+AGG | 0.410221 | 7_4:-56373182 | Msa1164680:CDS |
TTTGCTATTGGTGGCGGCGG+CGG | 0.410743 | 7_4:-56373909 | Msa1164680:CDS |
TAAGAGAAGGTGAGATGAAT+TGG | 0.412357 | 7_4:-56374565 | Msa1164680:CDS |
CCGGTTTCTTCGGATGGGAT+TGG | 0.415620 | 7_4:-56373654 | Msa1164680:CDS |
GGAGGAGTTGGAGAGCCTTC+GGG | 0.416356 | 7_4:-56373837 | Msa1164680:CDS |
CCTTCGGGTTCGGGGTATGT+TGG | 0.416821 | 7_4:-56373822 | Msa1164680:CDS |
CACCTCCCTGTGCCACCGTT+TGG | 0.419295 | 7_4:+56373859 | None:intergenic |
AAGATCTAGAGCCAGAAAAC+AGG | 0.420885 | 7_4:-56373496 | Msa1164680:intron |
TGTTGGATGCAGCTTGTTGT+TGG | 0.421539 | 7_4:+56374327 | None:intergenic |
CGGCGTAATGCTGCTGGGGC+CGG | 0.426351 | 7_4:+56373976 | None:intergenic |
GCACAGGGAGGTGGAGGAGT+TGG | 0.427569 | 7_4:-56373849 | Msa1164680:CDS |
GTTAGTCCGGTTTCTTCGGA+TGG | 0.429323 | 7_4:-56373660 | Msa1164680:CDS |
CCCTGTGCCACCGTTTGGTA+TGG | 0.438711 | 7_4:+56373864 | None:intergenic |
GGTGGTGGTGCTATGGCAAC+CGG | 0.443970 | 7_4:+56374023 | None:intergenic |
GAGGGAGAGTGGTGAATGGA+GGG | 0.444211 | 7_4:-56373734 | Msa1164680:CDS |
GATGGGCGGACCTGTTAGTC+CGG | 0.445248 | 7_4:-56373673 | Msa1164680:CDS |
GCTGCTTCATTTGCTATTGG+TGG | 0.446852 | 7_4:-56373918 | Msa1164680:CDS |
TCAGAAAGGGATTAGCAAAC+AGG | 0.447868 | 7_4:-56374270 | Msa1164680:CDS |
ATTGATATGAATGGTTTAAG+AGG | 0.448244 | 7_4:-56373603 | Msa1164680:CDS |
GGAAGAAAGAGGATGGTTGA+TGG | 0.453215 | 7_4:-56373582 | Msa1164680:CDS |
GAGGATTTCTTGGTTAAAGC+AGG | 0.456229 | 7_4:-56374074 | Msa1164680:CDS |
GATGACACTGCTGCTGCGGC+AGG | 0.456822 | 7_4:+56374002 | None:intergenic |
TGGTGGAGAGAAGGCAGAGG+AGG | 0.457363 | 7_4:-56373545 | Msa1164680:CDS |
GACTAGGGATAGTATAGGTA+CGG | 0.462211 | 7_4:-56373790 | Msa1164680:CDS |
AATGTCATTTCTTCATCGCT+TGG | 0.465109 | 7_4:-56374479 | Msa1164680:CDS |
GCCATACCAAACGGTGGCAC+AGG | 0.467096 | 7_4:-56373865 | Msa1164680:CDS |
ACGGTGGCACAGGGAGGTGG+AGG | 0.470179 | 7_4:-56373855 | Msa1164680:CDS |
GGGAAGGAGAAGAAGCGATC+AGG | 0.473369 | 7_4:-56374514 | Msa1164680:CDS |
TAACAAACCGCTGGCGGCGG+CGG | 0.477710 | 7_4:+56373759 | None:intergenic |
CCGCCAGCGGTTTGTTATGG+AGG | 0.477954 | 7_4:-56373753 | Msa1164680:CDS |
CAAACGGTGGCACAGGGAGG+TGG | 0.478151 | 7_4:-56373858 | Msa1164680:CDS |
CGATTCCTGCACCTCTCTGC+AGG | 0.479043 | 7_4:-56374220 | Msa1164680:CDS |
GGTTGATGGTCCTGTTGAAA+GGG | 0.481262 | 7_4:-56373568 | Msa1164680:CDS |
CCAATCCCATCCGAAGAAAC+CGG | 0.481309 | 7_4:+56373654 | None:intergenic |
GGTTAAAGCAGGGGTAGTTA+GGG | 0.481908 | 7_4:-56374063 | Msa1164680:CDS |
AGAGAGGAGAAGAAGACAAC+AGG | 0.484243 | 7_4:-56373049 | Msa1164680:intron |
TTAGTCCGGTTTCTTCGGAT+GGG | 0.486374 | 7_4:-56373659 | Msa1164680:CDS |
GACACTGCTGCTGCGGCAGG+TGG | 0.491945 | 7_4:+56374005 | None:intergenic |
AGGGAGAGTGGTGAATGGAG+GGG | 0.491999 | 7_4:-56373733 | Msa1164680:CDS |
GAGAGTGGTGAATGGAGGGG+CGG | 0.497049 | 7_4:-56373730 | Msa1164680:CDS |
AGAGTGGTGAATGGAGGGGC+GGG | 0.502580 | 7_4:-56373729 | Msa1164680:CDS |
AGTGGCACAAACTATGGGGA+TGG | 0.502987 | 7_4:-56373691 | Msa1164680:CDS |
CAATTTGGGATTGATATGAA+TGG | 0.505237 | 7_4:-56373612 | Msa1164680:CDS |
TGCGGCAGGTGGTGGTGCTA+TGG | 0.506524 | 7_4:+56374016 | None:intergenic |
GGGTGGTGGAGAGAAGGCAG+AGG | 0.506953 | 7_4:-56373548 | Msa1164680:CDS |
GGGCAGTTATGGTGTGGCAG+TGG | 0.507642 | 7_4:-56373709 | Msa1164680:CDS |
GGAGGGAGAGTGGTGAATGG+AGG | 0.509570 | 7_4:-56373735 | Msa1164680:CDS |
CCATAACAAACCGCTGGCGG+CGG | 0.510979 | 7_4:+56373756 | None:intergenic |
ACTTGTCTGCAGCTCAGAAA+GGG | 0.519532 | 7_4:-56374283 | Msa1164680:CDS |
CAACATTGTTGATGTTGTGA+TGG | 0.520957 | 7_4:+56374150 | None:intergenic |
GTGGCAGTGGCACAAACTAT+GGG | 0.520968 | 7_4:-56373696 | Msa1164680:CDS |
AACTTGTCTGCAGCTCAGAA+AGG | 0.521964 | 7_4:-56374284 | Msa1164680:CDS |
CGCCAAAAGTCGGTTGTCGA+GGG | 0.522444 | 7_4:+56374108 | None:intergenic |
AAGAATATGGTGGTAAGAGA+AGG | 0.522714 | 7_4:-56374578 | None:intergenic |
TATGGAGGGAGAGTGGTGAA+TGG | 0.528806 | 7_4:-56373738 | Msa1164680:CDS |
CGCCAGCGGTTTGTTATGGA+GGG | 0.528969 | 7_4:-56373752 | Msa1164680:CDS |
GCTTCATTTGCTATTGGTGG+CGG | 0.529772 | 7_4:-56373915 | Msa1164680:CDS |
ACTAGGGATAGTATAGGTAC+GGG | 0.531284 | 7_4:-56373789 | Msa1164680:CDS |
AGAAACTGAGAGGCTTAAGA+AGG | 0.532363 | 7_4:-56372865 | Msa1164680:CDS |
TAACAACTCTACAATGGCTC+AGG | 0.534100 | 7_4:-56373940 | Msa1164680:CDS |
TGTTGGGAATGGTAAGACTA+GGG | 0.535160 | 7_4:-56373805 | Msa1164680:CDS |
GAATTTCGGGTCCATGAACA+TGG | 0.544850 | 7_4:-56374387 | Msa1164680:CDS |
TCATTTGCTATTGGTGGCGG+CGG | 0.547319 | 7_4:-56373912 | Msa1164680:CDS |
TTTAAGAGGAAGAAAGAGGA+TGG | 0.548041 | 7_4:-56373589 | Msa1164680:CDS |
CGCTGTCACAGAGGCTGTGT+TGG | 0.549331 | 7_4:+56374414 | None:intergenic |
TCGCCAAAAGTCGGTTGTCG+AGG | 0.549884 | 7_4:+56374107 | None:intergenic |
TTGAAAGGGTGGTGGAGAGA+AGG | 0.555209 | 7_4:-56373554 | Msa1164680:CDS |
GTGGCACAAACTATGGGGAT+GGG | 0.557884 | 7_4:-56373690 | Msa1164680:CDS |
GGAACAACAGTCTGGTATGC+CGG | 0.558038 | 7_4:-56374042 | Msa1164680:CDS |
CTCCCTCCATAACAAACCGC+TGG | 0.558325 | 7_4:+56373750 | None:intergenic |
GTAGTTAGGGAACAACAGTC+TGG | 0.560019 | 7_4:-56374050 | Msa1164680:CDS |
TTCTCAACTGAAACAGGCAC+TGG | 0.564684 | 7_4:-56373176 | Msa1164680:intron |
TGGTTGATGGTCCTGTTGAA+AGG | 0.565970 | 7_4:-56373569 | Msa1164680:CDS |
GGCTGTGTTGGAACTCGTCG+AGG | 0.566650 | 7_4:+56374426 | None:intergenic |
GGTTCGGGGTATGTTGGGAA+TGG | 0.567692 | 7_4:-56373816 | Msa1164680:CDS |
CAGCAGCAGTGTCATCTCAC+CGG | 0.569711 | 7_4:-56373995 | Msa1164680:CDS |
ATGGTTTAAGAGGAAGAAAG+AGG | 0.570839 | 7_4:-56373593 | Msa1164680:CDS |
TTGGAGAGCCTTCGGGTTCG+GGG | 0.572733 | 7_4:-56373830 | Msa1164680:CDS |
TGTGCCACCGTTTGGTATGG+CGG | 0.573089 | 7_4:+56373867 | None:intergenic |
AGGATTTCTTGGTTAAAGCA+GGG | 0.574066 | 7_4:-56374073 | Msa1164680:CDS |
TGATGGTCCTGTTGAAAGGG+TGG | 0.574869 | 7_4:-56373565 | Msa1164680:CDS |
TTCTTCAGGCTGAACTAGAG+AGG | 0.575021 | 7_4:-56373065 | Msa1164680:intron |
GGTAAGACTAGGGATAGTAT+AGG | 0.577774 | 7_4:-56373795 | Msa1164680:CDS |
ACTGCGGCGTAATGCTGCTG+GGG | 0.580500 | 7_4:+56373972 | None:intergenic |
GTGAGATGAATTGGCAACAA+GGG | 0.583790 | 7_4:-56374556 | Msa1164680:CDS |
CCATACCAAACGGTGGCACA+GGG | 0.583912 | 7_4:-56373864 | Msa1164680:CDS |
TGGGATTGGAAACGAAAACT+CGG | 0.584083 | 7_4:-56373640 | Msa1164680:CDS |
GTAGAATCATTGCAGAGGGA+AGG | 0.584321 | 7_4:-56374530 | Msa1164680:CDS |
ATGTTGGGAATGGTAAGACT+AGG | 0.593588 | 7_4:-56373806 | Msa1164680:CDS |
CGGCGGCGGGAATCTGAATG+TGG | 0.594877 | 7_4:-56373895 | Msa1164680:CDS |
GGTTGCGCCGCCATACCAAA+CGG | 0.595175 | 7_4:-56373874 | Msa1164680:CDS |
GTATCCTCCGCCGCCGCCAG+CGG | 0.598153 | 7_4:-56373766 | Msa1164680:CDS |
CAACACAGCCTCTGTGACAG+CGG | 0.601697 | 7_4:-56374413 | Msa1164680:CDS |
AATGTCATCTCGCCAAAAGT+CGG | 0.605885 | 7_4:+56374098 | None:intergenic |
GTGAGATGACACTGCTGCTG+CGG | 0.608010 | 7_4:+56373998 | None:intergenic |
TGGTCCTGTTGAAAGGGTGG+TGG | 0.612440 | 7_4:-56373562 | Msa1164680:CDS |
GGAGGTAGAATCATTGCAGA+GGG | 0.612581 | 7_4:-56374534 | Msa1164680:CDS |
GGTGAGATGAATTGGCAACA+AGG | 0.616844 | 7_4:-56374557 | Msa1164680:CDS |
CGGTTGTCGAGGGGTAGACT+CGG | 0.617759 | 7_4:+56374118 | None:intergenic |
TCCTAATAACAACTCTACAA+TGG | 0.627967 | 7_4:-56373946 | Msa1164680:CDS |
GCACAAACTATGGGGATGGG+CGG | 0.628434 | 7_4:-56373687 | Msa1164680:CDS |
GGTTTGTTATGGAGGGAGAG+TGG | 0.634679 | 7_4:-56373745 | Msa1164680:CDS |
GATGAATTGGCAACAAGGGG+AGG | 0.635893 | 7_4:-56374552 | Msa1164680:CDS |
TGAGATGAATTGGCAACAAG+GGG | 0.639163 | 7_4:-56374555 | Msa1164680:CDS |
CCTCCATAACAAACCGCTGG+CGG | 0.640926 | 7_4:+56373753 | None:intergenic |
GGATTTCTTGGTTAAAGCAG+GGG | 0.646725 | 7_4:-56374072 | Msa1164680:CDS |
AGGGGCGGGCAGTTATGGTG+TGG | 0.648133 | 7_4:-56373715 | Msa1164680:CDS |
CCAACATACCCCGAACCCGA+AGG | 0.649040 | 7_4:+56373822 | None:intergenic |
GCCAAAAGTCGGTTGTCGAG+GGG | 0.657167 | 7_4:+56374109 | None:intergenic |
GCTGTGTTGGAACTCGTCGA+GGG | 0.657810 | 7_4:+56374427 | None:intergenic |
GGGATTGGAAACGAAAACTC+GGG | 0.662976 | 7_4:-56373639 | Msa1164680:CDS |
GGGAGGTAGAATCATTGCAG+AGG | 0.672753 | 7_4:-56374535 | Msa1164680:CDS |
TACCAAACGGTGGCACAGGG+AGG | 0.683725 | 7_4:-56373861 | Msa1164680:CDS |
TGCGCCGCCATACCAAACGG+TGG | 0.683832 | 7_4:-56373871 | Msa1164680:CDS |
TGGCAGTGGCACAAACTATG+GGG | 0.694881 | 7_4:-56373695 | Msa1164680:CDS |
ATTGGAAACGAAAACTCGGG+TGG | 0.712637 | 7_4:-56373636 | Msa1164680:CDS |
AAAGCAAAAGAGAAACTGAG+AGG | 0.716117 | 7_4:-56372875 | Msa1164680:CDS |
AATTCTTGCCGCTGTCACAG+AGG | 0.718674 | 7_4:+56374405 | None:intergenic |
CTAGGGATAGTATAGGTACG+GGG | 0.720083 | 7_4:-56373788 | Msa1164680:CDS |
GTTGTTATTAGGATACACTG+CGG | 0.806201 | 7_4:+56373956 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATTAAAGTATAAAATAAT+TGG | + | chr7_4:56373961-56373980 | None:intergenic | 10.0% |
!! | AGATTAAAGTATAAAATAAT+TGG | + | chr7_4:56373961-56373980 | None:intergenic | 10.0% |
!! | AAATAATTGGTTAAAATTTC+AGG | + | chr7_4:56373948-56373967 | None:intergenic | 15.0% |
!! | TATATATACATAAGAATTTG+TGG | + | chr7_4:56373996-56374015 | None:intergenic | 15.0% |
!! | TTTATATACTATTGAAGAAT+TGG | - | chr7_4:56374038-56374057 | Msa1164680:CDS | 15.0% |
!!! | CAAACATATTATTTCTAATT+TGG | + | chr7_4:56374096-56374115 | None:intergenic | 15.0% |
!! | TAGATTTGATTCAAAATAAA+AGG | + | chr7_4:56374450-56374469 | None:intergenic | 15.0% |
!! | AAATAATTGGTTAAAATTTC+AGG | + | chr7_4:56373948-56373967 | None:intergenic | 15.0% |
!! | TATATATACATAAGAATTTG+TGG | + | chr7_4:56373996-56374015 | None:intergenic | 15.0% |
!! | TTTATATACTATTGAAGAAT+TGG | - | chr7_4:56374038-56374057 | Msa1164680:CDS | 15.0% |
!!! | CAAACATATTATTTCTAATT+TGG | + | chr7_4:56374096-56374115 | None:intergenic | 15.0% |
!! | TAGATTTGATTCAAAATAAA+AGG | + | chr7_4:56374450-56374469 | None:intergenic | 15.0% |
!!! | TAATGTCTTTAAATTTTCTG+TGG | + | chr7_4:56374422-56374441 | None:intergenic | 20.0% |
!!! | TAATGTCTTTAAATTTTCTG+TGG | + | chr7_4:56374422-56374441 | None:intergenic | 20.0% |
! | ATGAGTTTCTAAGTAGTATT+TGG | - | chr7_4:56373052-56373071 | Msa1164680:CDS | 25.0% |
! | ATTGATATGAATGGTTTAAG+AGG | - | chr7_4:56373813-56373832 | Msa1164680:CDS | 25.0% |
! | GAAAGAAAATTGTGTTACAA+AGG | + | chr7_4:56374158-56374177 | None:intergenic | 25.0% |
! | CTGTAATAGTTAATGTTGTT+TGG | + | chr7_4:56374271-56374290 | None:intergenic | 25.0% |
! | ATTATAGTTTAGACCATCAT+TGG | + | chr7_4:56374396-56374415 | None:intergenic | 25.0% |
! | ATGAGTTTCTAAGTAGTATT+TGG | - | chr7_4:56373052-56373071 | Msa1164680:CDS | 25.0% |
! | ATTGATATGAATGGTTTAAG+AGG | - | chr7_4:56373813-56373832 | Msa1164680:CDS | 25.0% |
! | GAAAGAAAATTGTGTTACAA+AGG | + | chr7_4:56374158-56374177 | None:intergenic | 25.0% |
! | CTGTAATAGTTAATGTTGTT+TGG | + | chr7_4:56374271-56374290 | None:intergenic | 25.0% |
! | ATTATAGTTTAGACCATCAT+TGG | + | chr7_4:56374396-56374415 | None:intergenic | 25.0% |
! | GTTGTTGCTGTTATTATTGT+TGG | + | chr7_4:56373109-56373128 | None:intergenic | 30.0% |
TCCTAATAACAACTCTACAA+TGG | - | chr7_4:56373470-56373489 | Msa1164680:intron | 30.0% | |
! | CAATTTGGGATTGATATGAA+TGG | - | chr7_4:56373804-56373823 | Msa1164680:CDS | 30.0% |
! | ATTTTCTTTCTTGCTTATGC+AGG | - | chr7_4:56374168-56374187 | Msa1164680:CDS | 30.0% |
! | TCATGCTTCTTTTATTCTTC+AGG | - | chr7_4:56374337-56374356 | Msa1164680:CDS | 30.0% |
! | GTTGTTGCTGTTATTATTGT+TGG | + | chr7_4:56373109-56373128 | None:intergenic | 30.0% |
TCCTAATAACAACTCTACAA+TGG | - | chr7_4:56373470-56373489 | Msa1164680:intron | 30.0% | |
! | CAATTTGGGATTGATATGAA+TGG | - | chr7_4:56373804-56373823 | Msa1164680:CDS | 30.0% |
! | ATTTTCTTTCTTGCTTATGC+AGG | - | chr7_4:56374168-56374187 | Msa1164680:CDS | 30.0% |
! | TCATGCTTCTTTTATTCTTC+AGG | - | chr7_4:56374337-56374356 | Msa1164680:CDS | 30.0% |
TAAGAGAAGGTGAGATGAAT+TGG | - | chr7_4:56372851-56372870 | Msa1164680:CDS | 35.0% | |
! | AATGTCATTTCTTCATCGCT+TGG | - | chr7_4:56372937-56372956 | Msa1164680:intron | 35.0% |
TAGAAACTCATCCATGTTCA+TGG | + | chr7_4:56373043-56373062 | None:intergenic | 35.0% | |
! | CAGGAATCGATAACGAATTT+TGG | + | chr7_4:56373185-56373204 | None:intergenic | 35.0% |
GGAAAACTGTTGAACAAGTT+TGG | - | chr7_4:56373217-56373236 | Msa1164680:CDS | 35.0% | |
CAACATTGTTGATGTTGTGA+TGG | + | chr7_4:56373269-56373288 | None:intergenic | 35.0% | |
AGGATTTCTTGGTTAAAGCA+GGG | - | chr7_4:56373343-56373362 | Msa1164680:intron | 35.0% | |
! | GTTGTTATTAGGATACACTG+CGG | + | chr7_4:56373463-56373482 | None:intergenic | 35.0% |
! | GCCATTGTAGAGTTGTTATT+AGG | + | chr7_4:56373474-56373493 | None:intergenic | 35.0% |
ATGGTTTAAGAGGAAGAAAG+AGG | - | chr7_4:56373823-56373842 | Msa1164680:CDS | 35.0% | |
TTTAAGAGGAAGAAAGAGGA+TGG | - | chr7_4:56373827-56373846 | Msa1164680:CDS | 35.0% | |
! | AATTTCAGGAACCTGTTTTC+TGG | + | chr7_4:56373934-56373953 | None:intergenic | 35.0% |
AGAGAATTCTCAACTGAAAC+AGG | - | chr7_4:56374234-56374253 | Msa1164680:CDS | 35.0% | |
GTGATTCAACTATACTGACA+AGG | - | chr7_4:56374313-56374332 | Msa1164680:CDS | 35.0% | |
AAAGCAAAAGAGAAACTGAG+AGG | - | chr7_4:56374541-56374560 | Msa1164680:CDS | 35.0% | |
TAAGAGAAGGTGAGATGAAT+TGG | - | chr7_4:56372851-56372870 | Msa1164680:CDS | 35.0% | |
! | AATGTCATTTCTTCATCGCT+TGG | - | chr7_4:56372937-56372956 | Msa1164680:intron | 35.0% |
TAGAAACTCATCCATGTTCA+TGG | + | chr7_4:56373043-56373062 | None:intergenic | 35.0% | |
! | CAGGAATCGATAACGAATTT+TGG | + | chr7_4:56373185-56373204 | None:intergenic | 35.0% |
GGAAAACTGTTGAACAAGTT+TGG | - | chr7_4:56373217-56373236 | Msa1164680:CDS | 35.0% | |
CAACATTGTTGATGTTGTGA+TGG | + | chr7_4:56373269-56373288 | None:intergenic | 35.0% | |
AGGATTTCTTGGTTAAAGCA+GGG | - | chr7_4:56373343-56373362 | Msa1164680:intron | 35.0% | |
! | GTTGTTATTAGGATACACTG+CGG | + | chr7_4:56373463-56373482 | None:intergenic | 35.0% |
! | GCCATTGTAGAGTTGTTATT+AGG | + | chr7_4:56373474-56373493 | None:intergenic | 35.0% |
ATGGTTTAAGAGGAAGAAAG+AGG | - | chr7_4:56373823-56373842 | Msa1164680:CDS | 35.0% | |
TTTAAGAGGAAGAAAGAGGA+TGG | - | chr7_4:56373827-56373846 | Msa1164680:CDS | 35.0% | |
! | AATTTCAGGAACCTGTTTTC+TGG | + | chr7_4:56373934-56373953 | None:intergenic | 35.0% |
AGAGAATTCTCAACTGAAAC+AGG | - | chr7_4:56374234-56374253 | Msa1164680:CDS | 35.0% | |
GTGATTCAACTATACTGACA+AGG | - | chr7_4:56374313-56374332 | Msa1164680:CDS | 35.0% | |
AAAGCAAAAGAGAAACTGAG+AGG | - | chr7_4:56374541-56374560 | Msa1164680:CDS | 35.0% | |
GTGAGATGAATTGGCAACAA+GGG | - | chr7_4:56372860-56372879 | Msa1164680:CDS | 40.0% | |
TGAGATGAATTGGCAACAAG+GGG | - | chr7_4:56372861-56372880 | Msa1164680:CDS | 40.0% | |
! | TCAGAAAGGGATTAGCAAAC+AGG | - | chr7_4:56373146-56373165 | Msa1164680:intron | 40.0% |
!! | ATCGATAACGAATTTTGGCG+AGG | + | chr7_4:56373180-56373199 | None:intergenic | 40.0% |
AATGTCATCTCGCCAAAAGT+CGG | + | chr7_4:56373321-56373340 | None:intergenic | 40.0% | |
GATGACATTGGAGGATTTCT+TGG | - | chr7_4:56373332-56373351 | Msa1164680:intron | 40.0% | |
GAGGATTTCTTGGTTAAAGC+AGG | - | chr7_4:56373342-56373361 | Msa1164680:intron | 40.0% | |
GGATTTCTTGGTTAAAGCAG+GGG | - | chr7_4:56373344-56373363 | Msa1164680:intron | 40.0% | |
TAACAACTCTACAATGGCTC+AGG | - | chr7_4:56373476-56373495 | Msa1164680:intron | 40.0% | |
ATGTTGGGAATGGTAAGACT+AGG | - | chr7_4:56373610-56373629 | Msa1164680:CDS | 40.0% | |
TGTTGGGAATGGTAAGACTA+GGG | - | chr7_4:56373611-56373630 | Msa1164680:CDS | 40.0% | |
GGTAAGACTAGGGATAGTAT+AGG | - | chr7_4:56373621-56373640 | Msa1164680:CDS | 40.0% | |
GACTAGGGATAGTATAGGTA+CGG | - | chr7_4:56373626-56373645 | Msa1164680:CDS | 40.0% | |
ACTAGGGATAGTATAGGTAC+GGG | - | chr7_4:56373627-56373646 | Msa1164680:CDS | 40.0% | |
TGGGATTGGAAACGAAAACT+CGG | - | chr7_4:56373776-56373795 | Msa1164680:CDS | 40.0% | |
AAAACTCGGGTGGTCAATTT+GGG | - | chr7_4:56373790-56373809 | Msa1164680:CDS | 40.0% | |
! | AAGATCTAGAGCCAGAAAAC+AGG | - | chr7_4:56373920-56373939 | Msa1164680:CDS | 40.0% |
AGACAACAGGTAACCAATGA+TGG | - | chr7_4:56374380-56374399 | Msa1164680:CDS | 40.0% | |
TTACCTCATGCAGTGTTTAG+AGG | - | chr7_4:56374486-56374505 | Msa1164680:CDS | 40.0% | |
TTTCCTCTAAACACTGCATG+AGG | + | chr7_4:56374492-56374511 | None:intergenic | 40.0% | |
! | CTCTTTTGCTTTCTGAGCTT+TGG | + | chr7_4:56374533-56374552 | None:intergenic | 40.0% |
AGAAACTGAGAGGCTTAAGA+AGG | - | chr7_4:56374551-56374570 | Msa1164680:CDS | 40.0% | |
GTGAGATGAATTGGCAACAA+GGG | - | chr7_4:56372860-56372879 | Msa1164680:CDS | 40.0% | |
TGAGATGAATTGGCAACAAG+GGG | - | chr7_4:56372861-56372880 | Msa1164680:CDS | 40.0% | |
! | TCAGAAAGGGATTAGCAAAC+AGG | - | chr7_4:56373146-56373165 | Msa1164680:intron | 40.0% |
!! | ATCGATAACGAATTTTGGCG+AGG | + | chr7_4:56373180-56373199 | None:intergenic | 40.0% |
AATGTCATCTCGCCAAAAGT+CGG | + | chr7_4:56373321-56373340 | None:intergenic | 40.0% | |
GATGACATTGGAGGATTTCT+TGG | - | chr7_4:56373332-56373351 | Msa1164680:intron | 40.0% | |
GAGGATTTCTTGGTTAAAGC+AGG | - | chr7_4:56373342-56373361 | Msa1164680:intron | 40.0% | |
GGATTTCTTGGTTAAAGCAG+GGG | - | chr7_4:56373344-56373363 | Msa1164680:intron | 40.0% | |
TAACAACTCTACAATGGCTC+AGG | - | chr7_4:56373476-56373495 | Msa1164680:intron | 40.0% | |
ATGTTGGGAATGGTAAGACT+AGG | - | chr7_4:56373610-56373629 | Msa1164680:CDS | 40.0% | |
TGTTGGGAATGGTAAGACTA+GGG | - | chr7_4:56373611-56373630 | Msa1164680:CDS | 40.0% | |
GGTAAGACTAGGGATAGTAT+AGG | - | chr7_4:56373621-56373640 | Msa1164680:CDS | 40.0% | |
GACTAGGGATAGTATAGGTA+CGG | - | chr7_4:56373626-56373645 | Msa1164680:CDS | 40.0% | |
ACTAGGGATAGTATAGGTAC+GGG | - | chr7_4:56373627-56373646 | Msa1164680:CDS | 40.0% | |
TGGGATTGGAAACGAAAACT+CGG | - | chr7_4:56373776-56373795 | Msa1164680:CDS | 40.0% | |
AAAACTCGGGTGGTCAATTT+GGG | - | chr7_4:56373790-56373809 | Msa1164680:CDS | 40.0% | |
! | AAGATCTAGAGCCAGAAAAC+AGG | - | chr7_4:56373920-56373939 | Msa1164680:CDS | 40.0% |
AGACAACAGGTAACCAATGA+TGG | - | chr7_4:56374380-56374399 | Msa1164680:CDS | 40.0% | |
TTACCTCATGCAGTGTTTAG+AGG | - | chr7_4:56374486-56374505 | Msa1164680:CDS | 40.0% | |
TTTCCTCTAAACACTGCATG+AGG | + | chr7_4:56374492-56374511 | None:intergenic | 40.0% | |
! | CTCTTTTGCTTTCTGAGCTT+TGG | + | chr7_4:56374533-56374552 | None:intergenic | 40.0% |
AGAAACTGAGAGGCTTAAGA+AGG | - | chr7_4:56374551-56374570 | Msa1164680:CDS | 40.0% | |
GGTGAGATGAATTGGCAACA+AGG | - | chr7_4:56372859-56372878 | Msa1164680:CDS | 45.0% | |
GGAGGTAGAATCATTGCAGA+GGG | - | chr7_4:56372882-56372901 | Msa1164680:CDS | 45.0% | |
GTAGAATCATTGCAGAGGGA+AGG | - | chr7_4:56372886-56372905 | Msa1164680:CDS | 45.0% | |
GTCGAGGGTGAGTGAATATA+TGG | + | chr7_4:56372977-56372996 | None:intergenic | 45.0% | |
TGTGACAGCGGCAAGAATTT+CGG | - | chr7_4:56373015-56373034 | Msa1164680:intron | 45.0% | |
! | GAATTTCGGGTCCATGAACA+TGG | - | chr7_4:56373029-56373048 | Msa1164680:intron | 45.0% |
!! | TGTTGGATGCAGCTTGTTGT+TGG | + | chr7_4:56373092-56373111 | None:intergenic | 45.0% |
AACTTGTCTGCAGCTCAGAA+AGG | - | chr7_4:56373132-56373151 | Msa1164680:intron | 45.0% | |
ACTTGTCTGCAGCTCAGAAA+GGG | - | chr7_4:56373133-56373152 | Msa1164680:intron | 45.0% | |
! | TCAACAGTTTTCCTGCAGAG+AGG | + | chr7_4:56373210-56373229 | None:intergenic | 45.0% |
! | GACTTTTGGCGAGATGACAT+TGG | - | chr7_4:56373320-56373339 | Msa1164680:intron | 45.0% |
! | TTTTGGCGAGATGACATTGG+AGG | - | chr7_4:56373323-56373342 | Msa1164680:intron | 45.0% |
TGGTTAAAGCAGGGGTAGTT+AGG | - | chr7_4:56373352-56373371 | Msa1164680:intron | 45.0% | |
GGTTAAAGCAGGGGTAGTTA+GGG | - | chr7_4:56373353-56373372 | Msa1164680:intron | 45.0% | |
GTAGTTAGGGAACAACAGTC+TGG | - | chr7_4:56373366-56373385 | Msa1164680:intron | 45.0% | |
!! | CAGGCTGCTTCATTTGCTAT+TGG | - | chr7_4:56373495-56373514 | Msa1164680:intron | 45.0% |
!! | GCTGCTTCATTTGCTATTGG+TGG | - | chr7_4:56373498-56373517 | Msa1164680:CDS | 45.0% |
!! | GCTTCATTTGCTATTGGTGG+CGG | - | chr7_4:56373501-56373520 | Msa1164680:CDS | 45.0% |
CTAGGGATAGTATAGGTACG+GGG | - | chr7_4:56373628-56373647 | Msa1164680:CDS | 45.0% | |
ACCTGTTAGTCCGGTTTCTT+CGG | - | chr7_4:56373752-56373771 | Msa1164680:CDS | 45.0% | |
TTAGTCCGGTTTCTTCGGAT+GGG | - | chr7_4:56373757-56373776 | Msa1164680:CDS | 45.0% | |
GGGATTGGAAACGAAAACTC+GGG | - | chr7_4:56373777-56373796 | Msa1164680:CDS | 45.0% | |
ATTGGAAACGAAAACTCGGG+TGG | - | chr7_4:56373780-56373799 | Msa1164680:CDS | 45.0% | |
GAAAACTCGGGTGGTCAATT+TGG | - | chr7_4:56373789-56373808 | Msa1164680:CDS | 45.0% | |
GGAAGAAAGAGGATGGTTGA+TGG | - | chr7_4:56373834-56373853 | Msa1164680:CDS | 45.0% | |
!! | TGGTTGATGGTCCTGTTGAA+AGG | - | chr7_4:56373847-56373866 | Msa1164680:CDS | 45.0% |
!! | GGTTGATGGTCCTGTTGAAA+GGG | - | chr7_4:56373848-56373867 | Msa1164680:CDS | 45.0% |
TTCTCAACTGAAACAGGCAC+TGG | - | chr7_4:56374240-56374259 | Msa1164680:CDS | 45.0% | |
TTCTTCAGGCTGAACTAGAG+AGG | - | chr7_4:56374351-56374370 | Msa1164680:intron | 45.0% | |
AGAGAGGAGAAGAAGACAAC+AGG | - | chr7_4:56374367-56374386 | Msa1164680:intron | 45.0% | |
GGTGAGATGAATTGGCAACA+AGG | - | chr7_4:56372859-56372878 | Msa1164680:CDS | 45.0% | |
GGAGGTAGAATCATTGCAGA+GGG | - | chr7_4:56372882-56372901 | Msa1164680:CDS | 45.0% | |
GTAGAATCATTGCAGAGGGA+AGG | - | chr7_4:56372886-56372905 | Msa1164680:CDS | 45.0% | |
GTCGAGGGTGAGTGAATATA+TGG | + | chr7_4:56372977-56372996 | None:intergenic | 45.0% | |
TGTGACAGCGGCAAGAATTT+CGG | - | chr7_4:56373015-56373034 | Msa1164680:intron | 45.0% | |
! | GAATTTCGGGTCCATGAACA+TGG | - | chr7_4:56373029-56373048 | Msa1164680:intron | 45.0% |
!! | TGTTGGATGCAGCTTGTTGT+TGG | + | chr7_4:56373092-56373111 | None:intergenic | 45.0% |
AACTTGTCTGCAGCTCAGAA+AGG | - | chr7_4:56373132-56373151 | Msa1164680:intron | 45.0% | |
ACTTGTCTGCAGCTCAGAAA+GGG | - | chr7_4:56373133-56373152 | Msa1164680:intron | 45.0% | |
! | TCAACAGTTTTCCTGCAGAG+AGG | + | chr7_4:56373210-56373229 | None:intergenic | 45.0% |
! | GACTTTTGGCGAGATGACAT+TGG | - | chr7_4:56373320-56373339 | Msa1164680:intron | 45.0% |
! | TTTTGGCGAGATGACATTGG+AGG | - | chr7_4:56373323-56373342 | Msa1164680:intron | 45.0% |
TGGTTAAAGCAGGGGTAGTT+AGG | - | chr7_4:56373352-56373371 | Msa1164680:intron | 45.0% | |
GGTTAAAGCAGGGGTAGTTA+GGG | - | chr7_4:56373353-56373372 | Msa1164680:intron | 45.0% | |
GTAGTTAGGGAACAACAGTC+TGG | - | chr7_4:56373366-56373385 | Msa1164680:intron | 45.0% | |
!! | CAGGCTGCTTCATTTGCTAT+TGG | - | chr7_4:56373495-56373514 | Msa1164680:intron | 45.0% |
!! | GCTGCTTCATTTGCTATTGG+TGG | - | chr7_4:56373498-56373517 | Msa1164680:CDS | 45.0% |
!! | GCTTCATTTGCTATTGGTGG+CGG | - | chr7_4:56373501-56373520 | Msa1164680:CDS | 45.0% |
CTAGGGATAGTATAGGTACG+GGG | - | chr7_4:56373628-56373647 | Msa1164680:CDS | 45.0% | |
ACCTGTTAGTCCGGTTTCTT+CGG | - | chr7_4:56373752-56373771 | Msa1164680:CDS | 45.0% | |
TTAGTCCGGTTTCTTCGGAT+GGG | - | chr7_4:56373757-56373776 | Msa1164680:CDS | 45.0% | |
GGGATTGGAAACGAAAACTC+GGG | - | chr7_4:56373777-56373796 | Msa1164680:CDS | 45.0% | |
ATTGGAAACGAAAACTCGGG+TGG | - | chr7_4:56373780-56373799 | Msa1164680:CDS | 45.0% | |
GAAAACTCGGGTGGTCAATT+TGG | - | chr7_4:56373789-56373808 | Msa1164680:CDS | 45.0% | |
GGAAGAAAGAGGATGGTTGA+TGG | - | chr7_4:56373834-56373853 | Msa1164680:CDS | 45.0% | |
!! | TGGTTGATGGTCCTGTTGAA+AGG | - | chr7_4:56373847-56373866 | Msa1164680:CDS | 45.0% |
!! | GGTTGATGGTCCTGTTGAAA+GGG | - | chr7_4:56373848-56373867 | Msa1164680:CDS | 45.0% |
TTCTCAACTGAAACAGGCAC+TGG | - | chr7_4:56374240-56374259 | Msa1164680:CDS | 45.0% | |
TTCTTCAGGCTGAACTAGAG+AGG | - | chr7_4:56374351-56374370 | Msa1164680:intron | 45.0% | |
AGAGAGGAGAAGAAGACAAC+AGG | - | chr7_4:56374367-56374386 | Msa1164680:intron | 45.0% | |
GATGAATTGGCAACAAGGGG+AGG | - | chr7_4:56372864-56372883 | Msa1164680:CDS | 50.0% | |
GGGAGGTAGAATCATTGCAG+AGG | - | chr7_4:56372881-56372900 | Msa1164680:CDS | 50.0% | |
AATTCTTGCCGCTGTCACAG+AGG | + | chr7_4:56373014-56373033 | None:intergenic | 50.0% | |
GTGACAGCGGCAAGAATTTC+GGG | - | chr7_4:56373016-56373035 | Msa1164680:intron | 50.0% | |
GGAACAACAGTCTGGTATGC+CGG | - | chr7_4:56373374-56373393 | Msa1164680:intron | 50.0% | |
!! | TCATTTGCTATTGGTGGCGG+CGG | - | chr7_4:56373504-56373523 | Msa1164680:CDS | 50.0% |
!! | GGTTTGTTATGGAGGGAGAG+TGG | - | chr7_4:56373671-56373690 | Msa1164680:CDS | 50.0% |
TATGGAGGGAGAGTGGTGAA+TGG | - | chr7_4:56373678-56373697 | Msa1164680:CDS | 50.0% | |
TGTGGCAGTGGCACAAACTA+TGG | - | chr7_4:56373719-56373738 | Msa1164680:CDS | 50.0% | |
GTGGCAGTGGCACAAACTAT+GGG | - | chr7_4:56373720-56373739 | Msa1164680:CDS | 50.0% | |
TGGCAGTGGCACAAACTATG+GGG | - | chr7_4:56373721-56373740 | Msa1164680:CDS | 50.0% | |
AGTGGCACAAACTATGGGGA+TGG | - | chr7_4:56373725-56373744 | Msa1164680:CDS | 50.0% | |
GTGGCACAAACTATGGGGAT+GGG | - | chr7_4:56373726-56373745 | Msa1164680:CDS | 50.0% | |
TCCGAAGAAACCGGACTAAC+AGG | + | chr7_4:56373756-56373775 | None:intergenic | 50.0% | |
GTTAGTCCGGTTTCTTCGGA+TGG | - | chr7_4:56373756-56373775 | Msa1164680:CDS | 50.0% | |
CCAATCCCATCCGAAGAAAC+CGG | + | chr7_4:56373765-56373784 | None:intergenic | 50.0% | |
TGATGGTCCTGTTGAAAGGG+TGG | - | chr7_4:56373851-56373870 | Msa1164680:CDS | 50.0% | |
!! | TTGAAAGGGTGGTGGAGAGA+AGG | - | chr7_4:56373862-56373881 | Msa1164680:CDS | 50.0% |
GATGAATTGGCAACAAGGGG+AGG | - | chr7_4:56372864-56372883 | Msa1164680:CDS | 50.0% | |
GGGAGGTAGAATCATTGCAG+AGG | - | chr7_4:56372881-56372900 | Msa1164680:CDS | 50.0% | |
AATTCTTGCCGCTGTCACAG+AGG | + | chr7_4:56373014-56373033 | None:intergenic | 50.0% | |
GTGACAGCGGCAAGAATTTC+GGG | - | chr7_4:56373016-56373035 | Msa1164680:intron | 50.0% | |
GGAACAACAGTCTGGTATGC+CGG | - | chr7_4:56373374-56373393 | Msa1164680:intron | 50.0% | |
!! | TCATTTGCTATTGGTGGCGG+CGG | - | chr7_4:56373504-56373523 | Msa1164680:CDS | 50.0% |
!! | GGTTTGTTATGGAGGGAGAG+TGG | - | chr7_4:56373671-56373690 | Msa1164680:CDS | 50.0% |
TATGGAGGGAGAGTGGTGAA+TGG | - | chr7_4:56373678-56373697 | Msa1164680:CDS | 50.0% | |
TGTGGCAGTGGCACAAACTA+TGG | - | chr7_4:56373719-56373738 | Msa1164680:CDS | 50.0% | |
GTGGCAGTGGCACAAACTAT+GGG | - | chr7_4:56373720-56373739 | Msa1164680:CDS | 50.0% | |
TGGCAGTGGCACAAACTATG+GGG | - | chr7_4:56373721-56373740 | Msa1164680:CDS | 50.0% | |
AGTGGCACAAACTATGGGGA+TGG | - | chr7_4:56373725-56373744 | Msa1164680:CDS | 50.0% | |
GTGGCACAAACTATGGGGAT+GGG | - | chr7_4:56373726-56373745 | Msa1164680:CDS | 50.0% | |
TCCGAAGAAACCGGACTAAC+AGG | + | chr7_4:56373756-56373775 | None:intergenic | 50.0% | |
GTTAGTCCGGTTTCTTCGGA+TGG | - | chr7_4:56373756-56373775 | Msa1164680:CDS | 50.0% | |
CCAATCCCATCCGAAGAAAC+CGG | + | chr7_4:56373765-56373784 | None:intergenic | 50.0% | |
TGATGGTCCTGTTGAAAGGG+TGG | - | chr7_4:56373851-56373870 | Msa1164680:CDS | 50.0% | |
!! | TTGAAAGGGTGGTGGAGAGA+AGG | - | chr7_4:56373862-56373881 | Msa1164680:CDS | 50.0% |
GGGAAGGAGAAGAAGCGATC+AGG | - | chr7_4:56372902-56372921 | Msa1164680:CDS | 55.0% | |
GCTGTGTTGGAACTCGTCGA+GGG | + | chr7_4:56372992-56373011 | None:intergenic | 55.0% | |
CAACACAGCCTCTGTGACAG+CGG | - | chr7_4:56373003-56373022 | Msa1164680:intron | 55.0% | |
!! | GTTTTCCTGCAGAGAGGTGC+AGG | + | chr7_4:56373204-56373223 | None:intergenic | 55.0% |
!! | ACCCCTCGACAACCGACTTT+TGG | - | chr7_4:56373306-56373325 | Msa1164680:intron | 55.0% |
GCCAAAAGTCGGTTGTCGAG+GGG | + | chr7_4:56373310-56373329 | None:intergenic | 55.0% | |
CGCCAAAAGTCGGTTGTCGA+GGG | + | chr7_4:56373311-56373330 | None:intergenic | 55.0% | |
TCGCCAAAAGTCGGTTGTCG+AGG | + | chr7_4:56373312-56373331 | None:intergenic | 55.0% | |
GTGAGATGACACTGCTGCTG+CGG | + | chr7_4:56373421-56373440 | None:intergenic | 55.0% | |
CAGCAGCAGTGTCATCTCAC+CGG | - | chr7_4:56373421-56373440 | Msa1164680:intron | 55.0% | |
TGTGCCACCGTTTGGTATGG+CGG | + | chr7_4:56373552-56373571 | None:intergenic | 55.0% | |
CCATACCAAACGGTGGCACA+GGG | - | chr7_4:56373552-56373571 | Msa1164680:CDS | 55.0% | |
TGGAGGAGTTGGAGAGCCTT+CGG | - | chr7_4:56373578-56373597 | Msa1164680:CDS | 55.0% | |
! | AGTTGGAGAGCCTTCGGGTT+CGG | - | chr7_4:56373584-56373603 | Msa1164680:CDS | 55.0% |
! | CTTCGGGTTCGGGGTATGTT+GGG | - | chr7_4:56373595-56373614 | Msa1164680:CDS | 55.0% |
GGTTCGGGGTATGTTGGGAA+TGG | - | chr7_4:56373600-56373619 | Msa1164680:CDS | 55.0% | |
CCTCCATAACAAACCGCTGG+CGG | + | chr7_4:56373666-56373685 | None:intergenic | 55.0% | |
!! | CGCCAGCGGTTTGTTATGGA+GGG | - | chr7_4:56373664-56373683 | Msa1164680:CDS | 55.0% |
CTCCCTCCATAACAAACCGC+TGG | + | chr7_4:56373669-56373688 | None:intergenic | 55.0% | |
GAGGGAGAGTGGTGAATGGA+GGG | - | chr7_4:56373682-56373701 | Msa1164680:CDS | 55.0% | |
AGGGAGAGTGGTGAATGGAG+GGG | - | chr7_4:56373683-56373702 | Msa1164680:CDS | 55.0% | |
GCACAAACTATGGGGATGGG+CGG | - | chr7_4:56373729-56373748 | Msa1164680:CDS | 55.0% | |
CCGGTTTCTTCGGATGGGAT+TGG | - | chr7_4:56373762-56373781 | Msa1164680:CDS | 55.0% | |
TGGTCCTGTTGAAAGGGTGG+TGG | - | chr7_4:56373854-56373873 | Msa1164680:CDS | 55.0% | |
CTCTCCACCACCCTTTCAAC+AGG | + | chr7_4:56373861-56373880 | None:intergenic | 55.0% | |
GGGAAGGAGAAGAAGCGATC+AGG | - | chr7_4:56372902-56372921 | Msa1164680:CDS | 55.0% | |
GCTGTGTTGGAACTCGTCGA+GGG | + | chr7_4:56372992-56373011 | None:intergenic | 55.0% | |
CAACACAGCCTCTGTGACAG+CGG | - | chr7_4:56373003-56373022 | Msa1164680:intron | 55.0% | |
!! | GTTTTCCTGCAGAGAGGTGC+AGG | + | chr7_4:56373204-56373223 | None:intergenic | 55.0% |
!! | ACCCCTCGACAACCGACTTT+TGG | - | chr7_4:56373306-56373325 | Msa1164680:intron | 55.0% |
GCCAAAAGTCGGTTGTCGAG+GGG | + | chr7_4:56373310-56373329 | None:intergenic | 55.0% | |
CGCCAAAAGTCGGTTGTCGA+GGG | + | chr7_4:56373311-56373330 | None:intergenic | 55.0% | |
TCGCCAAAAGTCGGTTGTCG+AGG | + | chr7_4:56373312-56373331 | None:intergenic | 55.0% | |
GTGAGATGACACTGCTGCTG+CGG | + | chr7_4:56373421-56373440 | None:intergenic | 55.0% | |
CAGCAGCAGTGTCATCTCAC+CGG | - | chr7_4:56373421-56373440 | Msa1164680:intron | 55.0% | |
TGTGCCACCGTTTGGTATGG+CGG | + | chr7_4:56373552-56373571 | None:intergenic | 55.0% | |
CCATACCAAACGGTGGCACA+GGG | - | chr7_4:56373552-56373571 | Msa1164680:CDS | 55.0% | |
TGGAGGAGTTGGAGAGCCTT+CGG | - | chr7_4:56373578-56373597 | Msa1164680:CDS | 55.0% | |
! | AGTTGGAGAGCCTTCGGGTT+CGG | - | chr7_4:56373584-56373603 | Msa1164680:CDS | 55.0% |
! | CTTCGGGTTCGGGGTATGTT+GGG | - | chr7_4:56373595-56373614 | Msa1164680:CDS | 55.0% |
GGTTCGGGGTATGTTGGGAA+TGG | - | chr7_4:56373600-56373619 | Msa1164680:CDS | 55.0% | |
CCTCCATAACAAACCGCTGG+CGG | + | chr7_4:56373666-56373685 | None:intergenic | 55.0% | |
!! | CGCCAGCGGTTTGTTATGGA+GGG | - | chr7_4:56373664-56373683 | Msa1164680:CDS | 55.0% |
CTCCCTCCATAACAAACCGC+TGG | + | chr7_4:56373669-56373688 | None:intergenic | 55.0% | |
GAGGGAGAGTGGTGAATGGA+GGG | - | chr7_4:56373682-56373701 | Msa1164680:CDS | 55.0% | |
AGGGAGAGTGGTGAATGGAG+GGG | - | chr7_4:56373683-56373702 | Msa1164680:CDS | 55.0% | |
GCACAAACTATGGGGATGGG+CGG | - | chr7_4:56373729-56373748 | Msa1164680:CDS | 55.0% | |
CCGGTTTCTTCGGATGGGAT+TGG | - | chr7_4:56373762-56373781 | Msa1164680:CDS | 55.0% | |
TGGTCCTGTTGAAAGGGTGG+TGG | - | chr7_4:56373854-56373873 | Msa1164680:CDS | 55.0% | |
CTCTCCACCACCCTTTCAAC+AGG | + | chr7_4:56373861-56373880 | None:intergenic | 55.0% | |
GGCTGTGTTGGAACTCGTCG+AGG | + | chr7_4:56372993-56373012 | None:intergenic | 60.0% | |
CGCTGTCACAGAGGCTGTGT+TGG | + | chr7_4:56373005-56373024 | None:intergenic | 60.0% | |
CGATTCCTGCACCTCTCTGC+AGG | - | chr7_4:56373196-56373215 | Msa1164680:CDS | 60.0% | |
CGGTTGTCGAGGGGTAGACT+CGG | + | chr7_4:56373301-56373320 | None:intergenic | 60.0% | |
!! | GGTGGTGGTGCTATGGCAAC+CGG | + | chr7_4:56373396-56373415 | None:intergenic | 60.0% |
ACTGCGGCGTAATGCTGCTG+GGG | + | chr7_4:56373447-56373466 | None:intergenic | 60.0% | |
CACTGCGGCGTAATGCTGCT+GGG | + | chr7_4:56373448-56373467 | None:intergenic | 60.0% | |
ACACTGCGGCGTAATGCTGC+TGG | + | chr7_4:56373449-56373468 | None:intergenic | 60.0% | |
!! | TTTGCTATTGGTGGCGGCGG+CGG | - | chr7_4:56373507-56373526 | Msa1164680:CDS | 60.0% |
GGTTGCGCCGCCATACCAAA+CGG | - | chr7_4:56373542-56373561 | Msa1164680:CDS | 60.0% | |
GCCATACCAAACGGTGGCAC+AGG | - | chr7_4:56373551-56373570 | Msa1164680:CDS | 60.0% | |
CCCTGTGCCACCGTTTGGTA+TGG | + | chr7_4:56373555-56373574 | None:intergenic | 60.0% | |
TACCAAACGGTGGCACAGGG+AGG | - | chr7_4:56373555-56373574 | Msa1164680:CDS | 60.0% | |
GGAGGAGTTGGAGAGCCTTC+GGG | - | chr7_4:56373579-56373598 | Msa1164680:CDS | 60.0% | |
! | GTTGGAGAGCCTTCGGGTTC+GGG | - | chr7_4:56373585-56373604 | Msa1164680:CDS | 60.0% |
! | TTGGAGAGCCTTCGGGTTCG+GGG | - | chr7_4:56373586-56373605 | Msa1164680:CDS | 60.0% |
CCAACATACCCCGAACCCGA+AGG | + | chr7_4:56373597-56373616 | None:intergenic | 60.0% | |
! | CCTTCGGGTTCGGGGTATGT+TGG | - | chr7_4:56373594-56373613 | Msa1164680:CDS | 60.0% |
CCATAACAAACCGCTGGCGG+CGG | + | chr7_4:56373663-56373682 | None:intergenic | 60.0% | |
!! | CCGCCAGCGGTTTGTTATGG+AGG | - | chr7_4:56373663-56373682 | Msa1164680:CDS | 60.0% |
GGAGGGAGAGTGGTGAATGG+AGG | - | chr7_4:56373681-56373700 | Msa1164680:CDS | 60.0% | |
GAGAGTGGTGAATGGAGGGG+CGG | - | chr7_4:56373686-56373705 | Msa1164680:CDS | 60.0% | |
AGAGTGGTGAATGGAGGGGC+GGG | - | chr7_4:56373687-56373706 | Msa1164680:CDS | 60.0% | |
AATGGAGGGGCGGGCAGTTA+TGG | - | chr7_4:56373696-56373715 | Msa1164680:CDS | 60.0% | |
GGGCAGTTATGGTGTGGCAG+TGG | - | chr7_4:56373707-56373726 | Msa1164680:CDS | 60.0% | |
GATGGGCGGACCTGTTAGTC+CGG | - | chr7_4:56373743-56373762 | Msa1164680:CDS | 60.0% | |
TGGTGGAGAGAAGGCAGAGG+AGG | - | chr7_4:56373871-56373890 | Msa1164680:CDS | 60.0% | |
GGCTGTGTTGGAACTCGTCG+AGG | + | chr7_4:56372993-56373012 | None:intergenic | 60.0% | |
CGCTGTCACAGAGGCTGTGT+TGG | + | chr7_4:56373005-56373024 | None:intergenic | 60.0% | |
CGATTCCTGCACCTCTCTGC+AGG | - | chr7_4:56373196-56373215 | Msa1164680:CDS | 60.0% | |
CGGTTGTCGAGGGGTAGACT+CGG | + | chr7_4:56373301-56373320 | None:intergenic | 60.0% | |
!! | GGTGGTGGTGCTATGGCAAC+CGG | + | chr7_4:56373396-56373415 | None:intergenic | 60.0% |
ACTGCGGCGTAATGCTGCTG+GGG | + | chr7_4:56373447-56373466 | None:intergenic | 60.0% | |
CACTGCGGCGTAATGCTGCT+GGG | + | chr7_4:56373448-56373467 | None:intergenic | 60.0% | |
ACACTGCGGCGTAATGCTGC+TGG | + | chr7_4:56373449-56373468 | None:intergenic | 60.0% | |
!! | TTTGCTATTGGTGGCGGCGG+CGG | - | chr7_4:56373507-56373526 | Msa1164680:CDS | 60.0% |
GGTTGCGCCGCCATACCAAA+CGG | - | chr7_4:56373542-56373561 | Msa1164680:CDS | 60.0% | |
GCCATACCAAACGGTGGCAC+AGG | - | chr7_4:56373551-56373570 | Msa1164680:CDS | 60.0% | |
CCCTGTGCCACCGTTTGGTA+TGG | + | chr7_4:56373555-56373574 | None:intergenic | 60.0% | |
TACCAAACGGTGGCACAGGG+AGG | - | chr7_4:56373555-56373574 | Msa1164680:CDS | 60.0% | |
GGAGGAGTTGGAGAGCCTTC+GGG | - | chr7_4:56373579-56373598 | Msa1164680:CDS | 60.0% | |
! | GTTGGAGAGCCTTCGGGTTC+GGG | - | chr7_4:56373585-56373604 | Msa1164680:CDS | 60.0% |
! | TTGGAGAGCCTTCGGGTTCG+GGG | - | chr7_4:56373586-56373605 | Msa1164680:CDS | 60.0% |
CCAACATACCCCGAACCCGA+AGG | + | chr7_4:56373597-56373616 | None:intergenic | 60.0% | |
! | CCTTCGGGTTCGGGGTATGT+TGG | - | chr7_4:56373594-56373613 | Msa1164680:CDS | 60.0% |
CCATAACAAACCGCTGGCGG+CGG | + | chr7_4:56373663-56373682 | None:intergenic | 60.0% | |
!! | CCGCCAGCGGTTTGTTATGG+AGG | - | chr7_4:56373663-56373682 | Msa1164680:CDS | 60.0% |
GGAGGGAGAGTGGTGAATGG+AGG | - | chr7_4:56373681-56373700 | Msa1164680:CDS | 60.0% | |
GAGAGTGGTGAATGGAGGGG+CGG | - | chr7_4:56373686-56373705 | Msa1164680:CDS | 60.0% | |
AGAGTGGTGAATGGAGGGGC+GGG | - | chr7_4:56373687-56373706 | Msa1164680:CDS | 60.0% | |
AATGGAGGGGCGGGCAGTTA+TGG | - | chr7_4:56373696-56373715 | Msa1164680:CDS | 60.0% | |
GGGCAGTTATGGTGTGGCAG+TGG | - | chr7_4:56373707-56373726 | Msa1164680:CDS | 60.0% | |
GATGGGCGGACCTGTTAGTC+CGG | - | chr7_4:56373743-56373762 | Msa1164680:CDS | 60.0% | |
TGGTGGAGAGAAGGCAGAGG+AGG | - | chr7_4:56373871-56373890 | Msa1164680:CDS | 60.0% | |
! | TGCGGCAGGTGGTGGTGCTA+TGG | + | chr7_4:56373403-56373422 | None:intergenic | 65.0% |
GATGACACTGCTGCTGCGGC+AGG | + | chr7_4:56373417-56373436 | None:intergenic | 65.0% | |
!! | TTGCTATTGGTGGCGGCGGC+GGG | - | chr7_4:56373508-56373527 | Msa1164680:CDS | 65.0% |
CGGCGGCGGGAATCTGAATG+TGG | - | chr7_4:56373521-56373540 | Msa1164680:CDS | 65.0% | |
TGCGCCGCCATACCAAACGG+TGG | - | chr7_4:56373545-56373564 | Msa1164680:CDS | 65.0% | |
CACCTCCCTGTGCCACCGTT+TGG | + | chr7_4:56373560-56373579 | None:intergenic | 65.0% | |
CAAACGGTGGCACAGGGAGG+TGG | - | chr7_4:56373558-56373577 | Msa1164680:CDS | 65.0% | |
GCACAGGGAGGTGGAGGAGT+TGG | - | chr7_4:56373567-56373586 | Msa1164680:CDS | 65.0% | |
TAACAAACCGCTGGCGGCGG+CGG | + | chr7_4:56373660-56373679 | None:intergenic | 65.0% | |
!! | CCGCCGCCAGCGGTTTGTTA+TGG | - | chr7_4:56373660-56373679 | Msa1164680:CDS | 65.0% |
AGGGGCGGGCAGTTATGGTG+TGG | - | chr7_4:56373701-56373720 | Msa1164680:CDS | 65.0% | |
!! | GGGTGGTGGAGAGAAGGCAG+AGG | - | chr7_4:56373868-56373887 | Msa1164680:CDS | 65.0% |
! | TGCGGCAGGTGGTGGTGCTA+TGG | + | chr7_4:56373403-56373422 | None:intergenic | 65.0% |
GATGACACTGCTGCTGCGGC+AGG | + | chr7_4:56373417-56373436 | None:intergenic | 65.0% | |
!! | TTGCTATTGGTGGCGGCGGC+GGG | - | chr7_4:56373508-56373527 | Msa1164680:CDS | 65.0% |
CGGCGGCGGGAATCTGAATG+TGG | - | chr7_4:56373521-56373540 | Msa1164680:CDS | 65.0% | |
TGCGCCGCCATACCAAACGG+TGG | - | chr7_4:56373545-56373564 | Msa1164680:CDS | 65.0% | |
CACCTCCCTGTGCCACCGTT+TGG | + | chr7_4:56373560-56373579 | None:intergenic | 65.0% | |
CAAACGGTGGCACAGGGAGG+TGG | - | chr7_4:56373558-56373577 | Msa1164680:CDS | 65.0% | |
GCACAGGGAGGTGGAGGAGT+TGG | - | chr7_4:56373567-56373586 | Msa1164680:CDS | 65.0% | |
TAACAAACCGCTGGCGGCGG+CGG | + | chr7_4:56373660-56373679 | None:intergenic | 65.0% | |
!! | CCGCCGCCAGCGGTTTGTTA+TGG | - | chr7_4:56373660-56373679 | Msa1164680:CDS | 65.0% |
AGGGGCGGGCAGTTATGGTG+TGG | - | chr7_4:56373701-56373720 | Msa1164680:CDS | 65.0% | |
!! | GGGTGGTGGAGAGAAGGCAG+AGG | - | chr7_4:56373868-56373887 | Msa1164680:CDS | 65.0% |
ACTGCTGCTGCGGCAGGTGG+TGG | + | chr7_4:56373411-56373430 | None:intergenic | 70.0% | |
GACACTGCTGCTGCGGCAGG+TGG | + | chr7_4:56373414-56373433 | None:intergenic | 70.0% | |
CGGCGTAATGCTGCTGGGGC+CGG | + | chr7_4:56373443-56373462 | None:intergenic | 70.0% | |
ACGGTGGCACAGGGAGGTGG+AGG | - | chr7_4:56373561-56373580 | Msa1164680:CDS | 70.0% | |
ACTGCTGCTGCGGCAGGTGG+TGG | + | chr7_4:56373411-56373430 | None:intergenic | 70.0% | |
GACACTGCTGCTGCGGCAGG+TGG | + | chr7_4:56373414-56373433 | None:intergenic | 70.0% | |
CGGCGTAATGCTGCTGGGGC+CGG | + | chr7_4:56373443-56373462 | None:intergenic | 70.0% | |
ACGGTGGCACAGGGAGGTGG+AGG | - | chr7_4:56373561-56373580 | Msa1164680:CDS | 70.0% | |
GTATCCTCCGCCGCCGCCAG+CGG | - | chr7_4:56373650-56373669 | Msa1164680:CDS | 75.0% | |
GTATCCTCCGCCGCCGCCAG+CGG | - | chr7_4:56373650-56373669 | Msa1164680:CDS | 75.0% | |
! | CAAACCGCTGGCGGCGGCGG+AGG | + | chr7_4:56373657-56373676 | None:intergenic | 80.0% |
! | CAAACCGCTGGCGGCGGCGG+AGG | + | chr7_4:56373657-56373676 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 56372844 | 56374594 | 56372844 | ID=Msa1164680;Name=Msa1164680 |
chr7_4 | mRNA | 56372844 | 56374594 | 56372844 | ID=Msa1164680-mRNA-1;Parent=Msa1164680;Name=Msa1164680-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.75|0.4|1|0.5|0.2|5|0|426 |
chr7_4 | exon | 56374372 | 56374594 | 56374372 | ID=Msa1164680-mRNA-1:exon:16800;Parent=Msa1164680-mRNA-1 |
chr7_4 | exon | 56373497 | 56374356 | 56373497 | ID=Msa1164680-mRNA-1:exon:16799;Parent=Msa1164680-mRNA-1 |
chr7_4 | exon | 56373177 | 56373248 | 56373177 | ID=Msa1164680-mRNA-1:exon:16798;Parent=Msa1164680-mRNA-1 |
chr7_4 | exon | 56373050 | 56373079 | 56373050 | ID=Msa1164680-mRNA-1:exon:16797;Parent=Msa1164680-mRNA-1 |
chr7_4 | exon | 56372844 | 56372939 | 56372844 | ID=Msa1164680-mRNA-1:exon:16796;Parent=Msa1164680-mRNA-1 |
chr7_4 | CDS | 56374372 | 56374594 | 56374372 | ID=Msa1164680-mRNA-1:cds;Parent=Msa1164680-mRNA-1 |
chr7_4 | CDS | 56373497 | 56374356 | 56373497 | ID=Msa1164680-mRNA-1:cds;Parent=Msa1164680-mRNA-1 |
chr7_4 | CDS | 56373177 | 56373248 | 56373177 | ID=Msa1164680-mRNA-1:cds;Parent=Msa1164680-mRNA-1 |
chr7_4 | CDS | 56373050 | 56373079 | 56373050 | ID=Msa1164680-mRNA-1:cds;Parent=Msa1164680-mRNA-1 |
chr7_4 | CDS | 56372844 | 56372939 | 56372844 | ID=Msa1164680-mRNA-1:cds;Parent=Msa1164680-mRNA-1 |
Gene Sequence |
Protein sequence |